RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TACC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000013810

Ensembl transcript IDs: ENST00000313288.9, ENST00000404054.3, ENST00000458173.4, ENST00000466077.1, ENST00000467746.6, ENST00000470136.2, ENST00000470808.1, ENST00000484264.1, ENST00000484651.5, ENST00000493975.5, ENST00000612220.5, ENST00000650779.1, ENST00000651251.1, ENST00000651472.1, ENST00000651817.1, ENST00000652002.1, ENST00000652770.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTTCCAGTGGGACCCTGGGAACCCTGTCGAGGCCAAGGCCACCTaGTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGAGGCT +
Preference number: 1 (lower is better)
Translates to: GFQWDPGNPVEAKAT*STCTRLPGGRRHEA
Trigger: AGCCTCATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGTTCCCAGGGTCCCACTGGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR GCA 90 bp AGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAGACTCGCTGGAGCTaGCACTCCCAAAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGT +
Preference number: 1 (lower is better)
Translates to: SSPGQPGHLGQTRWS*HSQRLGLHPPGGRC
Trigger: ACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCTGGCTGACCTGGACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR CCA 90 bp CAGGGCACCTGGGCCAGACTCGCTGGAGCTGCCACTCCCAAAGGCTaGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTT +
Preference number: 1 (lower is better)
Translates to: QGTWARLAGAATPKG*ACIPQEVGVSLHWF
Trigger: AAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR GCA 90 bp CACCTGCTCCTCAGCTCCCGGTTCTCCTCCTGTGTCGCCTTTACCTaGTCAGGCCACACCCAAGTCAGCAGGCAGGCGGGCCAGACTGAC +
Preference number: 1 (lower is better)
Translates to: HLLLSSRFSSCVAFT*SGHTQVSRQAGQTD
Trigger: GTCAGTCTGGCCCGCCTGCCTGCTGACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACACAGGAGGAGAACCGGGAGCTGAGGAGCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR TCA 90 bp AGACACCATTTGGTTCTCAGAACTTCCTGGGCTCTGGGAAGAGCTTaGGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAGACTCGCTGGA +
Preference number: 1 (lower is better)
Translates to: RHHLVLRTSWALGRA*AVQVSQGTWARLAG
Trigger: TCCAGCGAGTCTGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGAACCAAATGGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR CCA 90 bp ACTTTTCCTGGAGACACCATTTGGTTCTCAGAACTTCCTGGGCTCTaGGAAGAGCTTGAGCAGTCCAGGTCAGCCAGGGCACCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: TFPGDTIWFSELPGL*EELEQSRSARAPGP
Trigger: TGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGAACCAAATGGTGTCTCCAGGAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 90 bp TGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCATCCTaGGTGAAAGGAGCCTCAAGTTTGCTGGCCATGCTAGGACTTAGA +
Preference number: 1 (lower is better)
Translates to: CVQTGCEFSSPRVSS*VKGASSLLAMLGLR
Trigger: TCTAAGTCCTAGCATGGCCAGCAAACTTGAGGCTCCTTTCACTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 90 bp TTCCTTGATGAGCTGTTGGTTCTCTTTCTGTGTCCAGACCGGGTGTaGGTTTTCCAGTCCAAGGGTGTCATCCTGAGTGAAAGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: FLDELLVLFLCPDRV*VFQSKGVILSERSL
Trigger: GAGGCTCCTTTCACTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACCAACAGCTCATCAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 90 bp CCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTAGAATTCCATaGGTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGTTCTCT +
Preference number: 1 (lower is better)
Translates to: PRRSVSASTGFCRIP*VVLASTSLMSCWFS
Trigger: AGAGAACCAACAGCTCATCAAGGAAGTGGATGCCAAAACTACTCATGGAATTCTACAGAAACCAGTGGAGGCTGACACCGACCTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR CCA 90 bp CACTCTGACTCTTACCCTGCCCTCTTTAAAATAGCCAATTGGAATTaGCTTAGACTGTGTGGTCCAACCTTAGCCAACAGGGGAACAACA +
Preference number: 1 (lower is better)
Translates to: HSDSYPALFKIANWN*LRLCGPTLANRGTT
Trigger: TGTTGTTCCCCTGTTGGCTAAGGTTGGACCACACAGTCTAAGCCAATTCCAATTGGCTATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR TCA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGCAGGCGGGCCAGACTaGCCCTCCCAGGACCTCCCC +
Preference number: 2 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLAGGPD*PSQDLP
Trigger: GGGGAGGTCCTGGGAGGGTCAGTCTGGCCCGCCTGC...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR TCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCACTCACCCCACCACTCTaGCTCTTACCCTGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGALTPPL*LLPCPL
Trigger: AAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAG...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCTGTGTCGCCTTTACCTaGTCAGGCCACACCCAAGTC +
Preference number: 2 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLCVAFT*SGHTQV
Trigger: GACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACACA...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CCA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCCCCCAGGCCTGCTATTaGGTTACTCACACGGGCTCT +
Preference number: 2 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPPQACY*VTHTGS
Trigger: AGAGCCCGTGTGAGTAACCCAATAGCAGGCCTGGGG...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
63% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp CGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTCCTGGGTGATCCTTaGCAGGTAATCCTCCACGCA +
Preference number: 2 (lower is better)
Translates to: RLGLAPDLGDLLVCQLQLLLGDP*QVILHA
Trigger: TGCGTGGAGGATTACCTGGCAAGGATCACCCAGGAG...AAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CAA 90 bp GAGACACCATTTGGTTCTCAGAACTTCCTGGGCTCTGGGAAGAGCTaGAGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAGACTCGCTGG +
Preference number: 2 (lower is better)
Translates to: ETPFGSQNFLGSGKS*SSPGQPGHLGQTRW
Trigger: CCAGCGAGTCTGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGAACCAAATGGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR TCA 90 bp CCCAAAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTTGTCCAGACCGGGTGTaGGTTTTCCAGTCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: PKGWACIPQEVGVSLHWFCPDRV*VFQSKG
Trigger: ACCCTTGGACTGGAAAACTCACACCCGGTCTGGACA...AAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR CCA 90 bp CCCAAAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTAATCCTGTGCGTCTGTaGATCCCGCAGAGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PKGWACIPQEVGVSLHWFNPVRL*IPQRCL
Trigger: CAGACACCTCTGCGGGATCCACAGACGCACAGGATT...AAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR TCA 90 bp CCTCCACGGCTTGCTCAGGGCTGCCAGACACTTTTCCTGGAGACACCATTTGGTGCTCTGGGAAGAGCTTaGGCAGTCCAGGTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PPRLAQGCQTLFLETPFGALGRA*AVQVSQ
Trigger: CTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGC...ACCAAATGGTGTCTCCAGGAAAAGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR GCA 90 bp CCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATACATGCAGGGGCCACCTaGCCCCGGAGCCCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PSNYSPHHSDSYPALFKIHAGAT*PRSPGL
Trigger: CAGGCCTGGGCTCCGGGGGCAGGTGGCCCCTGCATG...TATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp CTTCTGCTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCCACGTGCACCCGACTaGCAGGGGGCAGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: LLLLNFLHGLVHNLFEPVPRAPD*QGAGGM
Trigger: CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGG...GACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAGCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTGCCACCTGCTCCACGTaGACCCGACTGCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLATCST*TRLPGG
Trigger: GCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGC...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAATAGCCAATTGGAATTaGCTTAGACTGTGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGAIANWN*LRLCGP
Trigger: TGGACCACACAGTCTAAGCCAATTCCAATTGGCTAT...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATGAGGCCAAGGCCACCTaGTCCACGTGCACCCGACTG +
Preference number: 2 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDEAKAT*STCTRL
Trigger: CAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTC...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CCA 90 bp CTTCTGCTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCTTCCAGTGGGACCCTaGGAACCCTGTCGAGGCCAA +
Preference number: 2 (lower is better)
Translates to: LLLLNFLHGLVHNLFEPVLPVGP*EPCRGQ
Trigger: TTGGCCTCGACAGGGTTCCCAGGGTCCCACTGGAAG...GACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR TCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTTCACCTGCTCCATCCTaGCTCATCCCGGTCACCTGC +
Preference number: 2 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLSPAPS*LIPVTC
Trigger: GCAGGTGACCGGGATGAGTCAGGATGGAGCAGGTGA...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CCA 90 bp TCTCAGAACTTCCTGGGCTCTGGGAAGAGCTTGAGCAGTCCAGGTCAGCCAGGGTCCTTGATGAGCTGTTaGTTCTCTTTCTGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: SQNFLGSGKSLSSPGQPGSLMSC*FSFCVQ
Trigger: CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGA...CCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR GCA 90 bp GGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCATGGACTTAGAATCCTGTaGGTCTGTGGATCCCGCAGA +
Preference number: 2 (lower is better)
Translates to: GSLSVSRPGVSFPVQGCHGLRIL*VCGSRR
Trigger: TCTGCGGGATCCACAGACGCACAGGATTCTAAGTCC...ATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR CCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACGGGCCAGCCACACTGTaGTCCCCAGGCCTGCTATTG +
Preference number: 2 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNGPATL*SPGLLL
Trigger: CAATAGCAGGCCTGGGGACCACAGTGTGGCTGGCCC...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR GCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACTGTGGTCCCCAGGCCTaGTATTGGGTTACTCACACG +
Preference number: 2 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNCGPQA*YWVTHT
Trigger: CGTGTGAGTAACCCAATAGCAGGCCTGGGGACCACA...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR GCA 72 bp GGCTGGCCTGGAGGGCCAACGCTTCCGCCTGGGCCTTaGTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: GWPGGPTLPPGP*SGPGRSPRLPA
Trigger: AGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAGGCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CCA 72 bp CCCCACAGGATGGGGCCAGCCCGCACCCGAGGTCCCTaGAGCAATGTCCCAGAGGCACAGTTCCATGTGGGG +
Preference number: 3 (lower is better)
Translates to: PHRMGPARTRGP*SNVPEAQFHVG
Trigger: CCCCACATGGAACTGTGCCTCTGGGACATTGCTCCAGGGACCTCGGGTGCGGGCTGGCCCCATCCTGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CCA 72 bp AGTCCAGGTCAGCCAGGGCACCTGGGCCAGACTCGCTaGAGCTGCCACTCCCAAAGGCTGGGCTTGCATCCC +
Preference number: 3 (lower is better)
Translates to: SPGQPGHLGQTR*SCHSQRLGLHP
Trigger: GGGATGCAAGCCCAGCCTTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCTGGCTGACCTGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR CCA 72 bp AGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTaGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: RANASAWALLRT*AISSFASCSFS
Trigger: GGAGAAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR GCA 72 bp ACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTaGCCCCGCAGCCCAGTGGCAGATACTAGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: TSRHPTGVCPCS*PRSPVADTRGP
Trigger: AGGACCCCTAGTATCTGCCACTGGGCTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CAA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGGTGTGCTCTTGCCATaGCTCCATCTGCGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPGVLLP*LHLRGA
Trigger: TGCCCCTCGCAGATGGAGCAATGGCAAGAGCACACC...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CAA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCTCCCCAGGCCTGCTATaGGGTTACTCACACGGGCTC +
Preference number: 3 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPSPGLL*GYSHGL
Trigger: GAGCCCGTGTGAGTAACCCAATAGCAGGCCTGGGGA...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CCA 72 bp GTCCCTGGAGCAATGTCCCAGAGGCACAGTTCCATGTaGGGCTTCCAGTGGGACCCTGGGAACCCTGTCGAG +
Preference number: 3 (lower is better)
Translates to: VPGAMSQRHSSM*GFQWDPGNPVE
Trigger: CTCGACAGGGTTCCCAGGGTCCCACTGGAAGCCCCACATGGAACTGTGCCTCTGGGACATTGCTCCAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR GCA 72 bp CGTGCGGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTaGAAGGGTCTTCTAGGGTCTCAGAGGCGGGTGTCA +
Preference number: 3 (lower is better)
Translates to: RAESPLCAGTLS*KGLLGSQRRVS
Trigger: TGACACCCGCCTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 72 bp TTGGTTCTCAGAACTTCCTGGGCTCTGGGAAGAGCTTaGGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: LVLRTSWALGRA*AVQVSQGTWAR
Trigger: TCTGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR CAA 90 bp GTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGGGCTCTGGGAAGAGCTaGAGCAGTCCAGGTCAGCCA +
Preference number: 3 (lower is better)
Translates to: VSALCWDSVLQGSSRVSEGSGKS*SSPGQP
Trigger: TGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCC...CTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR CAA 90 bp CCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTTGTTTCTCAAAACGCTaGAAGAGGTCGGAGAAGGAC +
Preference number: 3 (lower is better)
Translates to: PGPCSGPGRSPRLPAAASCFSKR*KRSEKD
Trigger: GTCCTTCTCCGACCTCTTCAAGCGTTTTGAGAAACA...AGAAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR GCA 72 bp CCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTaGTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: PFPSLVQVCSCH*SICEGHPFCRK
Trigger: CTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR TCA 72 bp GATCCTTGCCAGGTAATCCTCCACGCACTTCTTCAGTaGCTCTTCGTTCTTGCGGTAGCCCTCGATCACCTC +
Preference number: 3 (lower is better)
Translates to: DPCQVILHALLQ*LFVLAVALDHL
Trigger: GAGGTGATCGAGGGCTACCGCAAGAACGAAGAGTCACTGAAGAAGTGCGTGGAGGATTACCTGGCAAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR TCA 72 bp ACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCATCCTaGGTGAAAGGAGCCTCAAGTTTGCTGGCCATGCTA +
Preference number: 3 (lower is better)
Translates to: TGCEFSSPRVSS*VKGASSLLAML
Trigger: TAGCATGGCCAGCAAACTTGAGGCTCCTTTCACTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 72 bp GAGCTGTTGGTTCTCTTTCTGTGTCCAGACCGGGTGTaGGTTTTCCAGTCCAAGGGTGTCATCCTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: ELLVLFLCPDRV*VFQSKGVILSE
Trigger: TTCACTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACCAACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR-3UTR CAA 90 bp GTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGTTCTCTTTCTGTGTCCAGAAAGGAGCCTCAAGTTaGCTGGCCATGCTAGGACTT +
Preference number: 3 (lower is better)
Translates to: VVLASTSLMSCWFSFCVQKGASS*LAMLGL
Trigger: AAGTCCTAGCATGGCCAGCAAACTTGAGGCTCCTTT...CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGAAGTGGATGCCAAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR TCA 72 bp TCGGTGTCAGCCTCCACTGGTTTCTGTAGAATTCCATaGGTAGTTTTGGCATCCACTTCCTTGATGAGCTGT +
Preference number: 3 (lower is better)
Translates to: SVSASTGFCRIP*VVLASTSLMSC
Trigger: ACAGCTCATCAAGGAAGTGGATGCCAAAACTACTCATGGAATTCTACAGAAACCAGTGGAGGCTGACACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
3UTR CCA 72 bp TCTTACCCTGCCCTCTTTAAAATAGCCAATTGGAATTaGCTTAGACTGTGTGGTCCAACCTTAGCCAACAGG +
Preference number: 3 (lower is better)
Translates to: SYPALFKIANWN*LRLCGPTLANR
Trigger: CCTGTTGGCTAAGGTTGGACCACACAGTCTAAGCCAATTCCAATTGGCTATTTTAAAGAGGGCAGGGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR-3UTR CAA 90 bp GAGAAGGACTTCTCCATGGAGTTCAGATCTGTGGTAAGTTGGTCTTTTTCTTTTGGCCAGATCTCTTCTTaGATTCTCCATTTAAAATTC +
Preference number: 3 (lower is better)
Translates to: EKDFSMEFRSVVSWSFSFGQISS*ILHLKF
Trigger: GAATTTTAAATGGAGAATCAAAGAAGAGATCTGGCC...AAAAGAAAAAGACCAACTTACCACAGATCTGAACTCCATGGAGAAGTCCTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCCATGCAGGGGCCACCTaGCCCCGGAGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLHAGAT*PRSPGL
Trigger: CAGGCCTGGGCTCCGGGGGCAGGTGGCCCCTGCATG...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp AGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGGCAGGCTGCCCCTGCTaGTGGGTGGGCACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RPRPPAPRAPDCQGAGGMAGCPC*WVGTGS
Trigger: TGAGCCAGTGCCCACCCATCAGCAGGGGCAGCCTGC...CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGGCCACCTGCTCCACGTaGACCCGACTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQATCST*TRLPGG
Trigger: GCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGC...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGGCTCAGACAGGGACCTaGCTCCTCCGTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRPPAPRAPDCQGAGGMAQTGT*LLRGRP
Trigger: GGGCCTGCCACGGAGGAGCCAGGTCCCTGTCTGAGC...CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGGAGGCCAAGGCCACCTaGTCCACGTGCACCCGACTG +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQEAKAT*STCTRL
Trigger: CAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTC...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGGCCAGCCACACTGTaGTCCCCAGGCCTGCTATTG +
Preference number: 4 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGAGPATL*SPGLLL
Trigger: CAATAGCAGGCCTGGGGACCACAGTGTGGCTGGCCC...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCCACCGTGCATGCTGCTaGTCTCGGTGGCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPHRACC*SRWPRA
Trigger: TGCCCGTGGCCACCGAGACCAGCAGCATGCACGGTG...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGACCTGGGGGTGGGCCTaGCACAGGAATGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQTWGWA*HRNVQC
Trigger: GCACTGGACATTCCTGTGCCAGGCCCACCCCCAGGT...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCACATTTGCACCGTGCATaGTGCTGGTCTCGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGAHLHRA*CWSRWP
Trigger: TGGCCACCGAGACCAGCAGCATGCACGGTGCAAATG...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCCTTGCTCTCTGCTGTTaGGGTCTCGGCTGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLLALCC*GLGCQL
Trigger: CAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAG...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGCTGATGGGTGGGCACTaGCTCACTGCCTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQLMGGH*LTAWTA
Trigger: AGCTGTCCAGGCAGTGAGCCAGTGCCCACCCATCAG...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGGGGACAGCGGCTCCGTaGAGGTCAGATCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RPRPPAPRAPDCQGAGGMGTAAP*RSDLLH
Trigger: ATGGAGAAGATCTGACCTCCACGGAGCCGCTGTCCC...CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAAGGCACAGTTCCATGTaGGGCTTCCAGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGARHSSM*GFQWDP
Trigger: AGGGTCCCACTGGAAGCCCCACATGGAACTGTGCCT...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp CCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTTCCTCAAGGGAGGCTTaGGGCCGGACCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGPCSGPGRSPRLPAAASSSREA*GRTSLP
Trigger: TGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGA...AGAAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CCTCCACGGCTTGCTCAGGGCTGCCAGACACTTTTCCTGGAGACACCATTTGGTGGAGGGGTCCGCGTCTaGTCCACGCCGGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPRLAQGCQTLFLETPFGGGVRV*STPGAK
Trigger: CTTGGCCCCCGGCGTGGAGCAGACGCGGACCCCTCC...ACCAAATGGTGTCTCCAGGAAAAGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCTCCTCCTCCACCTCCTaGGGGGCCTTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPSSSTS*GAFCCL
Trigger: GAGGCAGCAAAAGGCCCCGCAGGAGGTGGAGGAGGA...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTGGGGCTGGGCCTCACTaGAACCAGACTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RLGLAPDLGDLLVCQLQLGAGPH*NQTWCH
Trigger: GTGACACCAAGTCTGGTTGCAGTGAGGCCCAGCCCC...AAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGTCTCGGCTGCCAACTaGACCACAGGCGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPVSAAN*TTGVSS
Trigger: GGAGGACACGCCTGTGGTGCAGTTGGCAGCCGAGAC...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCATTGTGGGAAGCGAGGTaGTGGCAGAGTTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGALWEAR*WQSSRL
Trigger: GAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAA...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TGTCGCCTTTACCTGCTCAGGCCACACCCAAGTCAGCAGGCAGGCGGGCCAGACGGTGGCCACGGGCACTaGTCTACCAGGACTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CRLYLLRPHPSQQAGGPDGGHGH*STRTVP
Trigger: AGGGACAGTCCTGGTAGACCAGTGCCCGTGGCCACC...GTCTGGCCCGCCTGCCTGCTGACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCTGCTGGCTGTGCTCCTaGGTGGAACCAGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPCWLCS*VEPAGT
Trigger: GGTGCCTGCTGGTTCCACCCAGGAGCACAGCCAGCA...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp AGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGCTTCGAACCTGTCCATaGTCTTCCCCAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPRPPAPRAPDCQGAGGMLRTCP*SSPVPG
Trigger: ACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAG...CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp AGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCAGGAGGCATGAGTTCCTTCTGCTTCTaGACTTCCTCCATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RPRPPAPRAPDCQGAGGMSSFCF*TSSMAW
Trigger: CCAGGCCATGGAGGAAGTTCAGAAGCAGAAGGAACT...CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp CCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCGAGGGAGGCCTCTGCGGAGATaGCACCTGGGGCCACACTGC +
Preference number: 4 (lower is better)
Translates to: PLPLPCSGVLLPLLHLRGRPLRR*HLGPHC
Trigger: GCAGTGTGGCCCCAGGTGTCATCTCCGCAGAGGCCT...CCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCCTTTTGCTGCCTCACTaGTGCTTTCCTCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLLLLPH*CFPQGR
Trigger: CCTCCCTTGAGGAAAGCAGCAGTGAGGCAGCAAAAG...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCTGTTGGGGTCTCGGCTaGCAACTGCACCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPCWGLG*QLHHRR
Trigger: ACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACA...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGGTCTCATTTGCACCGTaGATGCTGCTGGTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQVSFAP*MLLVSV
Trigger: CACCGAGACCAGCAGCATGCACGGTGCAAATGAGAC...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGTGTTCCCTGGTCACCTaGTCCATCCTGACTCATCCC +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQCSLVT*SILTHP
Trigger: GGGATGAGTCAGGATGGAGCAGGTGACCAGGGAACA...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCACTGGCTCACTGCCTaGACAGCTTGTGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: RLGLAPDLGDLLVCQLQLHWLTA*TACGKR
Trigger: TCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTG...AAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCATCCAGGTCCTTCTaGCTGTACTGGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPASRSF*LYWSRS
Trigger: GGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGC...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp ACCCTGTCGAGGCCAAGGCCACCTGCTCCACGTGCACCCGACTGCCAGGGGGCACACGCACTTCTTCAGTaGCTCTTCGTTCTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: TLSRPRPPAPRAPDCQGAHALLQ*LFVLAV
Trigger: TACCGCAAGAACGAAGAGTCACTGAAGAAGTGCGTG...TGCCCCCTGGCAGTCGGGTGCACGTGGAGCAGGTGGCCTTGGCCTCGACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTTGCGGGGCCTTTTGCTaGCTCACTGCTGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGPCSGPGRSPRLPAAASCGAFC*LTAAFL
Trigger: GAGGAAAGCAGCAGTGAGGCAGCAAAAGGCCCCGCA...AGAAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp AAGAGCTTGAGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAGACTCGCTGGAGCTGTCCAGACCGGGTGTaGGTTTTCCAGTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KSLSSPGQPGHLGQTRWSCPDRV*VFQSKG
Trigger: ACCCTTGGACTGGAAAACTCACACCCGGTCTGGACA...GCTCCAGCGAGTCTGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp CCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCGAGGGTTCCCGCGGACGTCCTaGGGGAGTCTCATTTGCACC +
Preference number: 4 (lower is better)
Translates to: PLPLPCSGVLLPLLHLRGFPRTS*GSLICT
Trigger: GGTGCAAATGAGACTCCCTCAGGACGTCCGCGGGAA...CCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGGGAGCTCCTCACACCTaGTCCTCAGCTCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKGAPHT*SSAPGS
Trigger: AGAACCGGGAGCTGAGGAGCAGGTGTGAGGAGCTCC...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGCACCTGGGGCCACACTaGATCCAGGTCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKHLGPH*IQVLLA
Trigger: AGCCAGAAGGACCTGGATGCAGTGTGGCCCCAGGTG...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp TGTCGCCTTTACCTGCTCAGGCCACACCCAAGTCAGCAGGCAGGCGGGCCAGACTGTGGTCCCCAGGCCTaGTATTGGGTTACTCACACG +
Preference number: 4 (lower is better)
Translates to: CRLYLLRPHPSQQAGGPDCGPQA*YWVTHT
Trigger: CGTGTGAGTAACCCAATAGCAGGCCTGGGGACCACA...GTCTGGCCCGCCTGCCTGCTGACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TGTCGCCTTTACCTGCTCAGGCCACACCCAAGTCAGCAGGCAGGCGGGCCAGACGGGGTGCCCTTTTGCTaGTGGCGCCATCAGATACAT +
Preference number: 4 (lower is better)
Translates to: CRLYLLRPHPSQQAGGPDGVPFC*WRHQIH
Trigger: ATGTATCTGATGGCGCCACCAGCAAAAGGGCACCCC...GTCTGGCCCGCCTGCCTGCTGACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGGCTGAATGCAGCTGCTaGCTCAGACAGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKAECSC*LRQGPG
Trigger: GCCAGGTCCCTGTCTGAGCCAGCAGCTGCATTCAGC...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCGAGGGTGCGGAGATGACACCTaGGGCCACACTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PLPLPCSGVLLPLLHLRGCGDDT*GHTASR
Trigger: CCTGGATGCAGTGTGGCCCCAGGTGTCATCTCCGCA...CCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGGAGGCTGAATGCAGCTaGTGGCTCAGACAGGGACCT +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKEAECS*WLRQGP
Trigger: AGGTCCCTGTCTGAGCCAGCAGCTGCATTCAGCCTC...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTCCCGTGGTGTGTCCCTGCAGCTaGCCCCGCAGCCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HNLFEPVHDLPQFQVLPVVCPCS*PRSPVA
Trigger: TGCCACTGGGCTGCGGGGGCAGCTGCAGGGACACAC...CACGGGAAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCACTGGGCCAGACTCGCTaGAGCTGCCACTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GVSALCWDSVLQGSSRVSLGQTR*SCHSQR
Trigger: CCTTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAG...TGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGTGCCCTTTTGCTGGTaGCGCCATCAGATACATCAA +
Preference number: 4 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPVPFCW*RHQIHQ
Trigger: TTGATGTATCTGATGGCGCCACCAGCAAAAGGGCAC...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGTCTGAACTTCCTCCATaGCCTGGTACACAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQSELPP*PGTQPL
Trigger: AAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGA...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CAA 72 bp TTTGGTTCTCAGAACTTCCTGGGCTCTGGGAAGAGCTaGAGCAGTCCAGGTCAGCCAGGGCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGSQNFLGSGKS*SSPGQPGHLGQ
Trigger: CTGGCCCAGGTGCCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGAACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp GTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGGCTCTGGGAAGAGCTTaGGCAGTCCAGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSALCWDSVLQGSSRVSEALGRA*AVQVSQ
Trigger: CTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGC...CTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGCTCCTGGGTGATCCTTaGCAGGTAATCCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKLLGDP*QVILHA
Trigger: TGCGTGGAGGATTACCTGGCAAGGATCACCCAGGAG...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp AGGAATAAGAACCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCCTTCCGCCTGGGCCTTaGTCCGGACCTGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: RNKNPFPSLVQVCSCHCSLPPGP*SGPGRS
Trigger: AGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAG...GGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGGTTCTTATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCGGGTTCAAGCACTGCAACCAGACTTaGTGTCACCTCCGAACGGGA +
Preference number: 4 (lower is better)
Translates to: GVQSRDLCLLQAPPPGFKHCNQT*CHLRTG
Trigger: TCCCGTTCGGAGGTGACACCAAGTCTGGTTGCAGTG...CTTGAACCCGGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CTTCTGCTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCGCCAACGCTTCCGCCTaGGCCTTGCTCCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLLNFLHGLVHNLFEPVANASA*ALLRTW
Trigger: CCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGC...GACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAGCAGAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTCCCGTGTTCCTCAGGCTGGCCTaGAGGGCCAACGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: HNLFEPVHDLPQFQVLPVFLRLA*RANASA
Trigger: GGCGGAAGCGTTGGCCCTCCAGGCCAGCCTGAGGAA...CACGGGAAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTCCACCTCCGCGCCCGTaGCTAGAACCTCAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLPPPRP*LEPQRG
Trigger: ACCCCGCTGAGGTTCTAGGCACGGGCGCGGAGGTGG...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTTTCTCTTTAGTCTTCTaGTCCACTGTCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLGLAPDLGDLLVCQLQLFSLVF*STVFSS
Trigger: GCTGGAGAAGACAGTGGAGCAGAAGACTAAAGAGAA...AAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp TCCCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAACCACGTGCACCCGACTaGCAGGGGGCAGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: SRQTTHPTTLTLTLPSLKPRAPD*QGAGGM
Trigger: CATGCCTCCTGCCCCCTGGCAGTCGGGTGCACGTGG...TTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGTCTCCGCTTTGTGCTaGGACTCTGTCCTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GVSALCWDSVLQGSSRVSVSALC*DSVLQG
Trigger: CCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGAC...TGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp GTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGTCACCTGTTGCGGAGTaGGGAGGAGAGCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: VSALCWDSVLQGSSRVSESPVAE*GGEHLH
Trigger: ATGAAGGTGCTCTCCTCCTCACTCCGCAACAGGTGA...CTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp GTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGTCCCGCAGAGGTGTCTaGAAAGTCACCTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VSALCWDSVLQGSSRVSESRRGV*KVTCCG
Trigger: TCCGCAACAGGTGACTTTTCAGACACCTCTGCGGGA...CTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp TGTTGGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGCCCAAAGGCTGGGCTTaGATCCCCCAGGAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: CWFSFCVQTGCEFSSPRVPKGWA*IPQEVG
Trigger: ACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTGGG...CACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp GGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCATCAGACTCGCTGGAGCTaGCACTCCCAAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSLSVSRPGVSFPVQGCHQTRWS*HSQRLG
Trigger: GCCCAGCCTTTGGGAGTGGCAGCTCCAGCGAGTCTG...ATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp CCCAGGCCTGCTATTGGGTTACTCACACGGGCTCTGACACAGGGAAGGAGGTTGTCAAGGCTCTCTCCTTaGTCTCTGCTGTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PRPAIGLLTRALTQGRRLSRLSP*SLLLGS
Trigger: AGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGA...CAACCTCCTTCCCTGTGTCAGAGCCCGTGTGAGTAACCCAATAGCAGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTCCCGTGTCCTCGTTTGCCAGCTaGAGCTTCTCCTCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: HNLFEPVHDLPQFQVLPVSSFAS*SFSSAW
Trigger: CCACGCGGAGGAGAAGCTGCAGCTGGCAAACGAGGA...CACGGGAAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CAAAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTTCCGGTAACTTCTGGTaGCGAAAACAGGAAGTCGCA +
Preference number: 4 (lower is better)
Translates to: QRLGLHPPGGRCQPPLVSSGNFW*RKQEVA
Trigger: TGCGACTTCCTGTTTTCGCCACCAGAAGTTACCGGA...AGAAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp TGGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCAGCCACTCCCAAAGGCTaGGCTTGCATCCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WFSFCVQTGCEFSSPRVSATPKG*ACIPQE
Trigger: CTCCTGGGGGATGCAAGCCCAGCCTTTGGGAGTGGC...TGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp GGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAACTTCCTGGGCTCTaGGAAGAGCTTGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GVSALCWDSVLQGSSRVSELPGL*EELEQS
Trigger: GGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTC...TGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp TTGCTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAGTAAAAACTGCCTTGCTGTGCTGCTGGTCTCGGTaGCCACGGGCACTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LLHLRGAPFLQKVKTALLCCWSR*PRALVY
Trigger: GTAGACCAGTGCCCGTGGCCACCGAGACCAGCAGCA...CAGCAAGGCAGTTTTTACTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCGAGGGTCCTTCTGGCTGTACTaGAGCAGGTCCACTATAGGT +
Preference number: 4 (lower is better)
Translates to: PLPLPCSGVLLPLLHLRGSFWLY*SRSTIG
Trigger: ACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGA...CCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TTGCTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAGTAAAAACTGCCTTGCTGGCCCCCGCAGCCCAGTaGCAGATACTAGGGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LLHLRGAPFLQKVKTALLAPAAQ*QILGVL
Trigger: TAGGACCCCTAGTATCTGCCACTGGGCTGCGGGGGC...CAGCAAGGCAGTTTTTACTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTCCCGTGTCCTGCGGGGCCTTTTaGTGCCTCACTGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HNLFEPVHDLPQFQVLPVSCGAF*CLTAAF
Trigger: GAAAGCAGCAGTGAGGCAGCAAAAGGCCCCGCAGGA...CACGGGAAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTGTGGCAGGCCCAGCATaGAACTGTTCAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLVAGPA*NCSAAG
Trigger: GCCAGCGGCTGAACAGTTGCATGCTGGGCCTGCCAC...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTCTTCCGGTAACTTCTaGTGGCGAAAACAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KGWACIPQEVGVSLHWFLSSGNF*WRKQEV
Trigger: GACTTCCTGTTTTCGCCACCAGAAGTTACCGGAAGA...CAGAAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATGCCTTGCTCCGGACCTaGGCGATCTCCTCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDALLRT*AISSFA
Trigger: GGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGC...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACGCAGGCGGGCCAGACTaGCCCTCCCAGGACCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNAGGPD*PSQDLP
Trigger: GGGGAGGTCCTGGGAGGGTCAGTCTGGCCCGCCTGC...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp CTTCTGCTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCATGGTCTCCATCTCTTaGCCTCGTGATCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LLLLNFLHGLVHNLFEPVMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAAGAGATGGAGACCAT...GACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CAGTCCAAGGGTGTCATCCTGAGTGAAAGGAGCCTCAAGTTTGCTGGCCATGCTGCTGGGACTCTGTCCTaGAAGGGTCTTCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QSKGVILSERSLKFAGHAAGTLS*KGLLGS
Trigger: AGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGC...AGCATGGCCAGCAAACTTGAGGCTCCTTTCACTCAGGATGACACCCTTGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp TTGCTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAGTAAAAACTGCCTTGCTGTCTCTCCTTGCTCTCTaGTGTTGGGGTCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLHLRGAPFLQKVKTALLSLLAL*CWGLGC
Trigger: GCAGCCGAGACCCCAACAGCAGAGAGCAAGGAGAGA...CAGCAAGGCAGTTTTTACTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTACAGGCGTGACCCACTaGACCCGGCCAGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLTGVTH*TRPDLF
Trigger: GAAGAGATCTGGCCGGGTGCAGTGGGTCACGCCTGT...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCGAGGGGAACGGGATGAAGTTTaGGTCATCCATTTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPLPCSGVLLPLLHLRGERDEV*VIHFVP
Trigger: TGGGACAAAATGGATGACCCAAACTTCATCCCGTTC...CCCTCGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATCGAACTCCACAAGCTTaGCTTCCCGCGGACGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDRTPQA*LPADVL
Trigger: CAGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCG...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
3UTR CAA 72 bp CTACCTGTGTCAGGAATAAGAACCCCTTCCCCTCCCTaGTTCAGGTGTGCTCTTGCCATTGCTCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: LPVSGIRTPSPP*FRCALAIAPSA
Trigger: CGCAGATGGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGGTTCTTATTCCTGACACAGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTAGAATTCCATGAGTTGTCGTTTAAGACCTaGAGACTCATTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: HPPGGRCQPPLVSVEFHELSFKT*RLILPA
Trigger: GGCGGGCAGAATGAGTCTGCAGGTCTTAAACGACAA...CTCATGGAATTCTACAGAAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp TTCCAGTCCAAGGGTGTCATCCTGAGTGAAAGGAGCCTCAAGTTTGCTGGCCATTTTTCCTCCACGGCTTaGTCAGGGCTGCCAGACACT +
Preference number: 4 (lower is better)
Translates to: FQSKGVILSERSLKFAGHFSSTA*SGLPDT
Trigger: AGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGGAAAA...ATGGCCAGCAAACTTGAGGCTCCTTTCACTCAGGATGACACCCTTGGACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp TCCCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAAGTGGGGGTGCCCTTTTaGTGGTGGCGCCATCAGATA +
Preference number: 4 (lower is better)
Translates to: SRQTTHPTTLTLTLPSLKVGVPF*WWRHQI
Trigger: TATCTGATGGCGCCACCAGCAAAAGGGCACCCCCAC...TTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp TCCCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATGGGCACTGGCTCACTaGCTGGACAGCTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRQTTHPTTLTLTLPSLKWALAH*LDSLWE
Trigger: TTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGCCCA...TTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCATAATCCTGTGCGTCTGTaGATCCCGCAGAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSLSVSRPGVSFPVQGCHNPVRL*IPQRCL
Trigger: CAGACACCTCTGCGGGATCCACAGACGCACAGGATT...ATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATTCCCAGTCTCCTTGGTaGGGGTGCCCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDSQSPW*GCPFAG
Trigger: ACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGA...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCATCCGGTGGACAGGGGTaGGCCCCCAGGCGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPSGGQG*APRRGN
Trigger: GTTCCCGCGCCTGGGGGCCCACCCCTGTCCACCGGA...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TTGCTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAGTAAAAACTGCCTTGCTGGTCTTCTCCAGCGACTaGATGCGCATCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHLRGAPFLQKVKTALLVFSSD*MRICSF
Trigger: GAAGGAGCAGATGCGCATCCAGTCGCTGGAGAAGAC...CAGCAAGGCAGTTTTTACTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TCCCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAACCCCAGGCCTGCTATTaGGTTACTCACACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRQTTHPTTLTLTLPSLKPQACY*VTHTGS
Trigger: AGAGCCCGTGTGAGTAACCCAATAGCAGGCCTGGGG...TTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp TGGTTCTCTTTCTGTGTCCAGACCGGGTGTGAGTTTTCCAGTCCAAGGGTGTCAGGGTGTCATCCTGAGTaGAAGGAGCCTCAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: WFSFCVQTGCEFSSPRVSGCHPE*KEPQVC
Trigger: GCAAACTTGAGGCTCCTTTCACTCAGGATGACACCC...TGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp CGTGCGGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTTCTGTAGAATTCCATaGGTAGTTTTGGCATCCACT +
Preference number: 4 (lower is better)
Translates to: RAESPLCAGTLSCKGLLGFCRIP*VVLAST
Trigger: AGTGGATGCCAAAACTACTCATGGAATTCTACAGAA...CCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR TCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATGGAGGGGGTCGAACTTaGGGTATAAGGACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDGGGRT*GIRTAS
Trigger: GGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCC...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp CCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATATCTGGCCCTCCTGGGTaGTCCTTGCCAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: PSNYSPHHSDSYPALFKISGPPG*SLPGNP
Trigger: AGGATTACCTGGCAAGGATCACCCAGGAGGGCCAGA...TATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp TCCCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATCTCCATCTTGGAGATaGGGTCGTCGCAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SRQTTHPTTLTLTLPSLKSPSWR*GRRRSW
Trigger: CCAGGATCTGCGACGACCTCATCTCCAAGATGGAGA...TTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATATCCGCTGAGGCTGAATaGAGCTGCTGGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PSNYSPHHSDSYPALFKISAEAE*SCWLRQ
Trigger: CTGTCTGAGCCAGCAGCTGCATTCAGCCTCAGCGGA...TATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTTCTCCAGCGACTGGATaGGCATCTGCTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLSPATG*ASAPSS
Trigger: TGAGGAAGGAGCAGATGCGCATCCAGTCGCTGGAGA...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATTGTGTCGCCTTTACCTaGTCAGGCCACACCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDCVAFT*SGHTQV
Trigger: GACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACACA...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp CCTCCACGGCTTGCTCAGGGCTGCCAGACACTTTTCCTGGAGACACCATTTGGTTCCTTGATGAGCTGTTaGTTCTCTTTCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPRLAQGCQTLFLETPFGSLMSC*FSFCVQ
Trigger: CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGA...ACCAAATGGTGTCTCCAGGAAAAGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTGGTCGTCGCAGATCCTaGTCAGCTCCTCGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLGRRRS*SAPRSL
Trigger: AAGAGAACGAGGAGCTGACCAGGATCTGCGACGACC...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp TTGCTCCATCTGCGAGGGGCACCCTTTCTGCAGAAAGTAAAAACTGCCTTGCTGCACCTCCGAACGGGATaGAGTTTGGGTCATCCATTT +
Preference number: 4 (lower is better)
Translates to: LLHLRGAPFLQKVKTALLHLRTG*SLGHPF
Trigger: AAATGGATGACCCAAACTTCATCCCGTTCGGAGGTG...CAGCAAGGCAGTTTTTACTTTCTGCAGAAAGGGTGCCCCTCGCAGATGGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GGAACTAAGGTTTTCCTCCACGGCTTGCTCAGGGCTGCCAGACACTTTTCCTGGCTTTGGCCAGGTTCTTaGGTGGCACATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GTKVFLHGLLRAARHFSWLWPGS*VAHFLS
Trigger: AGAAAGAAAATGTGCCACCCAAGAACCTGGCCAAAG...CCAGGAAAAGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGGAAAACCTTAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp GTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGTTCTCTTTCTGTGTCCAGGGAGTCTCCGCTTTGTaGTGGGACTCTGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VVLASTSLMSCWFSFCVQGVSAL*WDSVLQ
Trigger: TTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC...CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGAAGTGGATGCCAAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTTTGAGGTATAAGGACTaGTTCCTCAAGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLLRYKD*FLKADS
Trigger: GGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAA...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp CTTCTGCTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCACAGGAATGTCCAGTaGTCCCAAGAAATCGAACTC +
Preference number: 4 (lower is better)
Translates to: LLLLNFLHGLVHNLFEPVHRNVQ*SQEIEL
Trigger: GAGTTCGATTTCTTGGGAGCACTGGACATTCCTGTG...GACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp GAGAAGGACTTCTCCATGGAGTTCAGATCTGTGGTAAGTTGGTCTTTTTCTTTTGGGCTTTCTGGGGGCTaGGCCTCACTGCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: EKDFSMEFRSVVSWSFSFGLSGG*ASLQPD
Trigger: GTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAGCCC...AAAAGAAAAAGACCAACTTACCACAGATCTGAACTCCATGGAGAAGTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACGCTCCTTCCTCAGGCTaGCCTGGAGGGCCAACGCTT +
Preference number: 4 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNAPSSG*PGGPTL
Trigger: AAGCGTTGGCCCTCCAGGCCAGCCTGAGGAAGGAGC...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACTCACCTGCTCCATCCTaGCTCATCCCGGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNSPAPS*LIPVTC
Trigger: GCAGGTGACCGGGATGAGTCAGGATGGAGCAGGTGA...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGTTCTCTTTCTGTGTCCAGGGACTTAGAATCCTGTaGGTCTGTGGATCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: VVLASTSLMSCWFSFCVQGLRIL*VCGSRR
Trigger: TCTGCGGGATCCACAGACGCACAGGATTCTAAGTCC...CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGAAGTGGATGCCAAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR GCA 90 bp GAGAAGGACTTCTCCATGGAGTTCAGATCTGTGGTAAGTTGGTCTTTTTCTTTTGACTGGATGCGCATCTaGTCCTTCCTCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EKDFSMEFRSVVSWSFSFDWMRI*SFLRLA
Trigger: GGCCAGCCTGAGGAAGGAGCAGATGCGCATCCAGTC...AAAAGAAAAAGACCAACTTACCACAGATCTGAACTCCATGGAGAAGTCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR GCA 90 bp GAGAAGGACTTCTCCATGGAGTTCAGATCTGTGGTAAGTTGGTCTTTTTCTTTTGGCGATCTCCTCGTTTaGCAGCTGCAGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EKDFSMEFRSVVSWSFSFGDLLV*QLQLLL
Trigger: GAGGAGAAGCTGCAGCTGGCAAACGAGGAGATCGCC...AAAAGAAAAAGACCAACTTACCACAGATCTGAACTCCATGGAGAAGTCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCACTTCCAGTGGGACCCTaGGAACCCTGTCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPLPVGP*EPCRGQ
Trigger: TTGGCCTCGACAGGGTTCCCAGGGTCCCACTGGAAG...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR TCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCACTCACCCCACCACTCTaGCTCTTACCCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPLTPPL*LLPCPL
Trigger: AAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAG...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCACTCTCCCAGTCTCCTTaGTGGGGGTGCCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPLSQSP*WGCPFA
Trigger: AGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAG...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCAAGGGCTTGGTACCTCTaGCCCTCCTGGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPRAWYL*PSWVIL
Trigger: AAGGATCACCCAGGAGGGCCAGAGGTACCAAGCCCT...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp AAAACTGCCTTGCTGAGAAAATTAATGTTCGAGCACTATTTCTTTGTGGCACCATGGGAAGCGAGGTGCTaGCAGAGTTCAAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KTALLRKLMFEHYFFVAPWEARC*QSSRLS
Trigger: AGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCA...TGGTGCCACAAAGAAATAGTGCTCGAACATTAATTTTCTCAGCAAGGCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CCA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACATAGCCAATTGGAATTaGCTTAGACTGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNIANWN*LRLCGP
Trigger: TGGACCACACAGTCTAAGCCAATTCCAATTGGCTAT...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS CCA 90 bp GGGCGCCCGCTCCGCCGTCGGTCTTGGCCCAGCTCTAGCCGCCCCTaGCCACCATCCAGGGGGCCCAGCCCGGCGGTCGGTCTAGGGCCG +
Preference number: 5 (lower is better)
Translates to: GRPLRRRSWPSSSRP*PPSRGPSPAVGLGP
Trigger: CGGCCCTAGACCGACCGCCGGGCTGGGCCCCCTGGATGGTGGCCAGGGGCGGCTAGAGCTGGGCCAAGACCGACGGCGGAGCGGGCGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493975.5
CDS GCA 90 bp GCTCTGAGCCCGCGCCGCCGCCGCCAGGAAGGAGGGGTCCGCGTCTaGTCCACGCCGGGGGCCAAGCCTAGCTGCTACCGCCGTCGCGCT +
Preference number: 5 (lower is better)
Translates to: ALSPRRRRQEGGVRV*STPGAKPSCYRRRA
Trigger: AGCGCGACGGCGGTAGCAGCTAGGCTTGGCCCCCGGCGTGGAGCAGACGCGGACCCCTCCTTCCTGGCGGCGGCGGCGCGGGCTCAGAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000612220.5
CDS GCA 90 bp GCCCAGGCCGGAGAGTCCCGGGGAGGCTGCTGGTGGGCAGCTGACTaGGGGGACACTGGGTGGAAGCCTGGACCCTCAGCGACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AQAGESRGGCWWAAD*GDTGWKPGPSATWA
Trigger: TGCCCAGGTCGCTGAGGGTCCAGGCTTCCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS TCA 90 bp CCATGCCCAGGCCGGAGAGTCCCGGGGAGGCTGCTGGTGGGCAGCTaGCTGCGGGGACACTGGGTGGAAGCCTGGACCCTCAGCGACCTG +
Preference number: 5 (lower is better)
Translates to: PCPGRRVPGRLLVGS*LRGHWVEAWTLSDL
Trigger: CAGGTCGCTGAGGGTCCAGGCTTCCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGCATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp GGCCAACGCCATGCCCAGGCCGGAGAGTCCCGGGGAGGCTGCTGGTaGGCAGCTGACTGCGGGGACACTGGGTGGAAGCCTGGACCCTCA +
Preference number: 5 (lower is better)
Translates to: GQRHAQAGESRGGCW*AADCGDTGWKPGPS
Trigger: TGAGGGTCCAGGCTTCCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGCATGGCGTTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 90 bp ACCAGAGGCCAACGCCATGCCCAGGCCGGAGAGTCCCGGGGAGGCTaGTGGTGGGCAGCTGACTGCGGGGACACTGGGTGGAAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: TRGQRHAQAGESRGG*WWAADCGDTGWKPG
Trigger: TCCAGGCTTCCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGCATGGCGTTGGCCTCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp GGGAGCCGGTATGGCGAGCTCCAGGATGTGCGTCGTGCTTCGTGGTaGTCCTGGAGGGACTGCAAGGGCCAGGCGGTCACCTGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: GSRYGELQDVRRASW*SWRDCKGQAVTCRR
Trigger: CCGGCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATACCGGCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp CCTGGGAGCCGGTATGGCGAGCTCCAGGATGTGCGTCGTGCTTCGTaGTGGTCCTGGAGGGACTGCAAGGGCCAGGCGGTCACCTGCCGC +
Preference number: 5 (lower is better)
Translates to: PGSRYGELQDVRRAS*WSWRDCKGQAVTCR
Trigger: GCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATACCGGCTCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp CCAGGAGGCGAAGTGGCCACTGCTGCGGGAGCACAGACCCCACCGTaGCGGCATTCCTCCTCGGCTCCGTGCGGAGTCTCCGCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: PGGEVATAAGAQTPP*RHSSSAPCGVSALH
Trigger: ATGCAAAGCGGAGACTCCGCACGGAGCCGAGGAGGAATGCCGGCACGGTGGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp GGTGAGGCCTGGGAGCCGGTATGGCGAGCTCCAGGATGTGCGTCGTaGTTCGTGGTGGTCCTGGAGGGACTGCAAGGGCCAGGCGGTCAC +
Preference number: 5 (lower is better)
Translates to: GEAWEPVWRAPGCAS*FVVVLEGLQGPGGH
Trigger: GTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATACCGGCTCCCAGGCCTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp AGGAGCAGAGGTGTGTGCACAGGTAAGGGTCTGAGTGCCATCTGCTaGCACGGGGGTGCCCACACCCGCAGGGCAGCCCAGGGCTTCGCC +
Preference number: 5 (lower is better)
Translates to: RSRGVCTGKGLSAIC*HGGAHTRRAAQGFA
Trigger: GGCGAAGCCCTGGGCTGCCCTGCGGGTGTGGGCACCCCCGTGCCAGCAGATGGCACTCAGACCCTTACCTGTGCACACACCTCTGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 90 bp CGGTATGGCGAGCTCCAGGATGTGCGTCGTGCTTCGTGGTGGTCCTaGAGGGACTGCAAGGGCCAGGCGGTCACCTGCCGCCGGCTGACA +
Preference number: 5 (lower is better)
Translates to: RYGELQDVRRASWWS*RDCKGQAVTCRRLT
Trigger: TGTCAGCCGGCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp CAGCCCTGCCAGCCGGCCTCCGGAACCACCCTGTCTGCACCTCCCTaGGGACCATCTGGCGACGGTAGCTCACAGTGGTGCCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: QPCQPASGTTLSAPP*GPSGDGSSQWCLQT
Trigger: TGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAGATGGTCCCCAGGGAGGTGCAGACAGGGTGGTTCCGGAGGCCGGCTGGCAGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS-3UTR CAA 90 bp TGTCGCCTTTACCTGCTCAGGCCACACCCAAGTCAGCAGGCAGGCGGGCCAGACGCTTCCGCCTGGGCCTaGCTCCGGACCTGGGCGATC +
Preference number: 5 (lower is better)
Translates to: CRLYLLRPHPSQQAGGPDASAWA*LRTWAI
Trigger: GATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGC...GTCTGGCCCGCCTGCCTGCTGACTTGGGTGTGGCCTGAGCAGGTAAAGGCGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS GCA 90 bp GCAGGCTTCCTTAGGGATTGCACCAGGAGGCGAAGTGGCCACTGCTaGGGGAGCACAGACCCCACCGTGCCGGCATTCCTCCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGFLRDCTRRRSGHC*GSTDPTVPAFLLGS
Trigger: GGAGCCGAGGAGGAATGCCGGCACGGTGGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAGGAAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp TCCGCAGGCTTCCTTAGGGATTGCACCAGGAGGCGAAGTGGCCACTaGTGCGGGAGCACAGACCCCACCGTGCCGGCATTCCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: SAGFLRDCTRRRSGH*CGSTDPTVPAFLLG
Trigger: GCCGAGGAGGAATGCCGGCACGGTGGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAGGAAGCCTGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp AGGCAGACCCTGCAGGGGTGCTCCTCCGCAGGCTTCCTTAGGGATTaGACCAGGAGGCGAAGTGGCCACTGCTGCGGGAGCACAGACCCC +
Preference number: 5 (lower is better)
Translates to: RQTLQGCSSAGFLRD*TRRRSGHCCGSTDP
Trigger: GGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAGGAAGCCTGCGGAGGAGCACCCCTGCAGGGTCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp TGCTGGCTCAGACAGGGACCTGGCTCCTCCGTGGCAGGCCCAGCATaGAACTGTTCAGCCGCTGGCTGGCCCAGCCTGGTCTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: CWLRQGPGSSVAGPA*NCSAAGWPSLVSGL
Trigger: AAGCCCTGAGACCAGGCTGGGCCAGCCAGCGGCTGAACAGTTGCATGCTGGGCCTGCCACGGAGGAGCCAGGTCCCTGTCTGAGCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 90 bp GGCGAGGGCAGGGTGGAGTGGGGTAGGCCACGGCGGGACAGACTCTaGTCCCACCACAGCCCCACTGCTAGCTCAGCATCTGCACAACTG +
Preference number: 5 (lower is better)
Translates to: GEGRVEWGRPRRDRL*SHHSPTASSASAQL
Trigger: CAGTTGTGCAGATGCTGAGCTAGCAGTGGGGCTGTGGTGGGAGCAGAGTCTGTCCCGCCGTGGCCTACCCCACTCCACCCTGCCCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp GAGCTCCAGGATGTGCGTCGTGCTTCGTGGTGGTCCTGGAGGGACTaGAAGGGCCAGGCGGTCACCTGCCGCCGGCTGACACTCAGCCTA +
Preference number: 5 (lower is better)
Translates to: ELQDVRRASWWSWRD*KGQAVTCRRLTLSL
Trigger: TAGGCTGAGTGTCAGCCGGCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp AGGGGCGACACTCGGGCTCACGGCAGCAAGAACCACACTCACTGCTaGAAGGCCACCAGAGGCCAACGCCATGCCCAGGCCGGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RGDTRAHGSKNHTHC*KATRGQRHAQAGES
Trigger: GGACTCTCCGGCCTGGGCATGGCGTTGGCCTCTGGTGGCCTTGCAGCAGTGAGTGTGGTTCTTGCTGCCGTGAGCCCGAGTGTCGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp CCTACAGAGGCTGCTGCTAGACATAGCCGCACGGCGAGGGCAGGGTaGAGTGGGGTAGGCCACGGCGGGACAGACTCTGCTCCCACCACA +
Preference number: 5 (lower is better)
Translates to: PTEAAARHSRTARAG*SGVGHGGTDSAPTT
Trigger: TGTGGTGGGAGCAGAGTCTGTCCCGCCGTGGCCTACCCCACTCCACCCTGCCCTCGCCGTGCGGCTATGTCTAGCAGCAGCCTCTGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp TGGGCCTCCCGCCTTGGATACTGCATGCCCTGGGTCCCCAACCCTTaGGACCCAAGCGCTCGGACAGCCCAGACACCTTTCCGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: WASRLGYCMPWVPNP*DPSARTAQTPFRGA
Trigger: GGCACCTCGGAAAGGTGTCTGGGCTGTCCGAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp GCTGACTGCGGGGACACTGGGTGGAAGCCTGGACCCTCAGCGACCTaGGCAGTAGTGACAGGCCAGGGGCCGGCAGCTCTCTGCAATTCC +
Preference number: 5 (lower is better)
Translates to: ADCGDTGWKPGPSAT*AVVTGQGPAALCNS
Trigger: GGAATTGCAGAGAGCTGCCGGCCCCTGGCCTGTCACTACTGCCCAGGTCGCTGAGGGTCCAGGCTTCCACCCAGTGTCCCCGCAGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS-3UTR CAA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCCCTTGCTCTCTGCTGTaGGGGTCTCGGCTGCCAACT +
Preference number: 5 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLPCSLL*GSRLPT
Trigger: AGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGG...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp GGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCGCAGCACTGCCTGGACAGCTaGTGGGAAGCGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GWNQQAPNRCVSLQLPPQHCLDS*WEARCW
Trigger: CCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTG...CTGCGGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGGTGTGCTCTTGCCATaGCTCCATCTGCGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLGVLLP*LHLRGA
Trigger: TGCCCCTCGCAGATGGAGCAATGGCAAGAGCACACC...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS TCA 90 bp GCTGGATCGCTGGGGGACCCGCAAGCCTCGAACTCAGGGAGAAAGTaGCTCGGAGGAAGCCTTCTGGCGGCCTGGAGGAGCTCGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AGSLGDPQASNSGRK*LGGSLLAAWRSSGE
Trigger: CTCTCCCGAGCTCCTCCAGGCCGCCAGAAGGCTTCCTCCGAGTCACTTTCTCCCTGAGTTCGAGGCTTGCGGGTCCCCCAGCGATCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS GCA 90 bp CACCGTGCCGGCATTCCTCCTCGGCTCCGTGCGGAGTCTCCGCTTTaGATTCTTCCTCGGCTCCGTGCGGAGTCTCCGCTTTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HRAGIPPRLRAESPL*ILPRLRAESPLCAG
Trigger: CCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAATGCAAAGCGGAGACTCCGCACGGAGCCGAGGAGGAATGCCGGCACGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp GGGTCCTCTCCTGCTCCGCTCCTACCGTCGTCCTCCTCCACCTCCTaGGGGGCCTTTTGCTGCCTCACTGCTGCTTTCCTCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GSSPAPLLPSSSSTS*GAFCCLTAAFLKGG
Trigger: GCCTCCCTTGAGGAAAGCAGCAGTGAGGCAGCAAAAGGCCCCGCAGGAGGTGGAGGAGGACGACGGTAGGAGCGGAGCAGGAGAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 90 bp CTGTGGGCAGAACCCTCTGGCGGCCTCGCAGGCACCTTCCAGGCCTaGTCTGGGCAGATGGATGGCCCAGACATCCCTCCTTCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LWAEPSGGLAGTFQA*SGQMDGPDIPPSSK
Trigger: CTTGCTGGAAGGAGGGATGTCTGGGCCATCCATCTGCCCAGAGCAGGCCTGGAAGGTGCCTGCGAGGCCGCCAGAGGGTTCTGCCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp GAAAGGGGCGACACTCGGGCTCACGGCAGCAAGAACCACACTCACTaGTGCAAGGCCACCAGAGGCCAACGCCATGCCCAGGCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: ERGDTRAHGSKNHTH*CKATRGQRHAQAGE
Trigger: CTCTCCGGCCTGGGCATGGCGTTGGCCTCTGGTGGCCTTGCAGCAGTGAGTGTGGTTCTTGCTGCCGTGAGCCCGAGTGTCGCCCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp TGCTCCCACCACAGCCCCACTGCTAGCTCAGCATCTGCACAACTGTaGGGCCTGCCAAGCCCTGGCTCCGTGGGAGCCACCAGCCTCACT +
Preference number: 5 (lower is better)
Translates to: CSHHSPTASSASAQL*GLPSPGSVGATSLT
Trigger: AGTGAGGCTGGTGGCTCCCACGGAGCCAGGGCTTGGCAGGCCCCACAGTTGTGCAGATGCTGAGCTAGCAGTGGGGCTGTGGTGGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp GTGGCCTTGCACAGCCGTGACCACCTTTCAGTGGGCCTCCCGCCTTaGATACTGCATGCCCTGGGTCCCCAACCCTTGGGACCCAAGCGC +
Preference number: 5 (lower is better)
Translates to: VALHSRDHLSVGLPP*ILHALGPQPLGPKR
Trigger: GCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCACGGCTGTGCAAGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp AGAGGGTGGGAGCGTCATGCACCGGCGACACAGTGGAGGACGTCATaGACGGGCAGGGAGGCAGCGGCAACCGAAACTAGCGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: RGWERHAPATQWRTS*TGREAAATETSGSV
Trigger: GACTGAGCCGCTAGTTTCGGTTGCCGCTGCCTCCCTGCCCGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS-3UTR CAA 90 bp TCCTGGGTGGAACCAGCAGGCACCCAACAGGTGTGTGTCCCTGCAGCTGCCCCCTTCCTCAAGGGAGGCTaGAGGCCGGACCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SWVEPAGTQQVCVPAAAPFLKGG*RPDLSP
Trigger: GGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAA...GGGGGCAGCTGCAGGGACACACACCTGTTGGGTGCCTGCTGGTTCCACCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCTCACTGCAACCAGACTaGGTGTCACCTCCGAACGGG +
Preference number: 5 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLSLQPD*VSPPNG
Trigger: CCCGTTCGGAGGTGACACCAAGTCTGGTTGCAGTGA...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS TCA 90 bp AGAGTCCCGTGGCCAGGAGGACACCAGGGTGGCCTTGCACAGCCGTaGCCACCTTTCAGTGGGCCTCCCGCCTTGGATACTGCATGCCCT +
Preference number: 5 (lower is better)
Translates to: RVPWPGGHQGGLAQP*PPFSGPPALDTACP
Trigger: AGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCACGGCTGTGCAAGGCCACCCTGGTGTCCTCCTGGCCACGGGACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp GCTTCGTGGTGGTCCTGGAGGGACTGCAAGGGCCAGGCGGTCACCTaGCGCCGGCTGACACTCAGCCTAAGACAGATCCCCACAGTAGCA +
Preference number: 5 (lower is better)
Translates to: ASWWSWRDCKGQAVT*RRLTLSLRQIPTVA
Trigger: TGCTACTGTGGGGATCTGTCTTAGGCTGAGTGTCAGCCGGCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp CCCTTGGGACCCAAGCGCTCGGACAGCCCAGACACCTTTCCGAGGTaGCCCAGGCCCCGGTGCACCAGCGCTGTCTCAAATCTCACAGAT +
Preference number: 5 (lower is better)
Translates to: PLGPKRSDSPDTFPR*PRPRCTSAVSNLTD
Trigger: ATCTGTGAGATTTGAGACAGCGCTGGTGCACCGGGGCCTGGGGCACCTCGGAAAGGTGTCTGGGCTGTCCGAGCGCTTGGGTCCCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp GTGACCACCTTTCAGTGGGCCTCCCGCCTTGGATACTGCATGCCCTaGGTCCCCAACCCTTGGGACCCAAGCGCTCGGACAGCCCAGACA +
Preference number: 5 (lower is better)
Translates to: VTTFQWASRLGYCMP*VPNPWDPSARTAQT
Trigger: TGTCTGGGCTGTCCGAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp AGGAGGACACCAGGGTGGCCTTGCACAGCCGTGACCACCTTTCAGTaGGCCTCCCGCCTTGGATACTGCATGCCCTGGGTCCCCAACCCT +
Preference number: 5 (lower is better)
Translates to: RRTPGWPCTAVTTFQ*ASRLGYCMPWVPNP
Trigger: AGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCACGGCTGTGCAAGGCCACCCTGGTGTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp GGCAGAACCCTCTGGCGGCCTCGCAGGCACCTTCCAGGCCTGCTCTaGGCAGATGGATGGCCCAGACATCCCTCCTTCCAGCAAGCATGT +
Preference number: 5 (lower is better)
Translates to: GRTLWRPRRHLPGLL*ADGWPRHPSFQQAC
Trigger: ACATGCTTGCTGGAAGGAGGGATGTCTGGGCCATCCATCTGCCCAGAGCAGGCCTGGAAGGTGCCTGCGAGGCCGCCAGAGGGTTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp TCAACTCCAGGCAGAGGGTGGGAGCGTCATGCACCGGCGACACAGTaGAGGACGTCATGGACGGGCAGGGAGGCAGCGGCAACCGAAACT +
Preference number: 5 (lower is better)
Translates to: STPGRGWERHAPATQ*RTSWTGREAAATET
Trigger: AGTTTCGGTTGCCGCTGCCTCCCTGCCCGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCTGCCTGGAGTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS TCA 90 bp CCGCTCCTCGAGGAGCTGGCCATTTGGCCTGCAGCCACTTCTTCCTaGGGACTCAGGGTCATGGCCCTGCCAGCCACCAGGTGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PLLEELAIWPAATSS*GLRVMALPATRWLV
Trigger: AACCAACCACCTGGTGGCTGGCAGGGCCATGACCCTGAGTCCTCAGGAAGAAGTGGCTGCAGGCCAAATGGCCAGCTCCTCGAGGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp CCTGCCGCCCTCAGCTGCCTCGCAAACCAGCTATGCTGTGACTCCTaGACCCTGTCTCGTTCACAGGTCATCCCATGCCCCCGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: PAALSCLANQLCCDS*TLSRSQVIPCPRGK
Trigger: CTTGCCACGGGGGCATGGGATGACCTGTGAACGAGACAGGGTGCAGGAGTCACAGCATAGCTGGTTTGCGAGGCAGCTGAGGGCGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS GCA 90 bp CAGGATACAAACCCAGTCAACTCCAGGCAGAGGGTGGGAGCGTCATaGACCGGCGACACAGTGGAGGACGTCATGGACGGGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QDTNPVNSRQRVGAS*TGDTVEDVMDGQGG
Trigger: GCCTCCCTGCCCGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCTGCCTGGAGTTGACTGGGTTTGTATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS CCA 90 bp CTCTTTCAGCTCCAAGGCAGGCTGCCCCTGCTGATGGGTGGGCACTaGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LFQLQGRLPLLMGGH*LTAWTACGKRGAGR
Trigger: TCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGCCCACCCATCAGCAGGGGCAGCCTGCCTTGGAGCTGAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp CGTGGAGGCACGTGGCCTCGGTGGCCCGGGCACTCACCCATGGCCTaGTACACAACCTCTTCGAACCTGTCCATGATCTTCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RGGTWPRWPGHSPMA*YTTSSNLSMIFLWE
Trigger: CTCCCACAGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGGTGAGTGCCCGGGCCACCGAGGCCACGTGCCTCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS-3UTR CAA 90 bp CGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCGTTTGCCAGCTGCAGCTTCTGAGGGAGTCTCATTaGCACCGTGCATGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RLGLAPDLGDLLVCQLQLLRESH*HRACCW
Trigger: CCAGCAGCATGCACGGTGCAAATGAGACTCCCTCAG...AAGCTGCAGCTGGCAAACGAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGAGTGCAGTCACGTGATCTCTGCTTGCTGCAAGCTCCGCCTCCCTCGAACTCCACAAGCTaGGCTTCCCGCGGACGTCCT +
Preference number: 5 (lower is better)
Translates to: AQAGVQSRDLCLLQAPPPSNSTS*ASRGRP
Trigger: AGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCGA...GGGAGGCGGAGCTTGCAGCAAGCAGAGATCACGTGACTGCACTCCAGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS TCA 90 bp CCCCACAGTAGCACCTCCAGGAGCCCAAGCTTTTGGGAGGCCAGATaGGGCCTGGTGTTCCCGTCCTGCCAGACACCTACAGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PHSSTSRSPSFWEAR*GLVFPSCQTPTEAA
Trigger: AGCAGCCTCTGTAGGTGTCTGGCAGGACGGGAACACCAGGCCTCATCTGGCCTCCCAAAAGCTTGGGCTCCTGGAGGTGCTACTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp AAGGCTCTCTCCTTGCTCTCTGCTGTTGGGGTCTCGGCTGCCAACTaGACCACAGGCGTGTCCTCCGCTGAGGCTGAATGCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KALSLLSAVGVSAAN*TTGVSSAEAECSCW
Trigger: CCAGCAGCTGCATTCAGCCTCAGCGGAGGACACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 90 bp GGGTGGGCACTGGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTaGTGGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GWALAHCLDSLWEAR*WQSSRLSPCSLLLG
Trigger: CCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 90 bp AGCCACCAGCCTCACTACCACCAGCTTCCCCGCAACTCGCCTCAGTaGTTCCACGGCCGGGCCCATGTTGAAGGGACTCGTGTGTTAGGA +
Preference number: 5 (lower is better)
Translates to: SHQPHYHQLPRNSPQ*FHGRAHVEGTRVLG
Trigger: TCCTAACACACGAGTCCCTTCAACATGGGCCCGGCCGTGGAAGCACTGAGGCGAGTTGCGGGGAAGCTGGTGGTAGTGAGGCTGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp AAGGCTCTCTCCTTGCTCTCTGCTGTTGGGGTCTCGGCTGCCAACTaGACCACAGGCGTGTCCTCCGCTGAGGCTGAATGCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: KALSLLSAVGVSAAN*TTGVSSAEAECSCL
Trigger: CAGGCAGCTGCATTCAGCCTCAGCGGAGGACACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466077.1
CDS GCA 90 bp CACCTCCCTGGGGACCATCTGGCGACGGTAGCTCACAGTGGTGCCTaGAGACACCCAGCCCCTTTGTGTGCCTACAGCTCTCTTAGGGAC +
Preference number: 5 (lower is better)
Translates to: HLPGDHLATVAHSGA*RHPAPLCAYSSLRD
Trigger: GTCCCTAAGAGAGCTGTAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAGATGGTCCCCAGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp TGGCCATTTGGCCTGCAGCCACTTCTTCCTGAGGACTCAGGGTCATaGCCCTGCCAGCCACCAGGTGGTTGGTTGGGGCTGTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: WPFGLQPLLPEDSGS*PCQPPGGWLGLCSQ
Trigger: CTGAGAGCACAGCCCCAACCAACCACCTGGTGGCTGGCAGGGCCATGACCCTGAGTCCTCAGGAAGAAGTGGCTGCAGGCCAAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 90 bp CTGTCTGCACCTCCCTGGGGACCATCTGGCGACGGTAGCTCACAGTaGTGCCTGCAGACACCCAGCCCCTTTGTGTGCCTACAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LSAPPWGPSGDGSSQ*CLQTPSPFVCLQLS
Trigger: AGAGAGCTGTAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAGATGGTCCCCAGGGAGGTGCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp CGCAAGCCTCGAACTCAGGGAGAAAGTGACTCGGAGGAAGCCTTCTaGCGGCCTGGAGGAGCTCGGGAGAGCAGCAGACCCAGCCTTAGT +
Preference number: 5 (lower is better)
Translates to: RKPRTQGESDSEEAF*RPGGARESSRPSLS
Trigger: ACTAAGGCTGGGTCTGCTGCTCTCCCGAGCTCCTCCAGGCCGCCAGAAGGCTTCCTCCGAGTCACTTTCTCCCTGAGTTCGAGGCTTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS GCA 90 bp CCTCGGCTCCGTGCGGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTaGAAGGGTCTTCTAGGGTCTCAGAGGCGGGTGTCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: PRLRAESPLCAGTLS*KGLLGSQRRVSLFC
Trigger: ACAGAAGAGTGACACCCGCCTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000493975.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp GTGCCCCAGGCCCCGGTGCACCAGCGCTGTCTCAAATCTCACAGATaGCTGATCATAGCCGAGTCGTCTGTCACACAACAGCGGACGGCT +
Preference number: 5 (lower is better)
Translates to: VPQAPVHQRCLKSHR*LIIAESSVTQQRTA
Trigger: AGCCGTCCGCTGTTGTGTGACAGACGACTCGGCTATGATCAGGCATCTGTGAGATTTGAGACAGCGCTGGTGCACCGGGGCCTGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 90 bp GGCTGTTGGACCCCTGCCCACTGTTGGCCAAGCCCCAGAGCGGCCTaGAGGTTCTGTGGAATAGCTACTACCTGCGTCCTTACCACTGCA +
Preference number: 5 (lower is better)
Translates to: GCWTPAHCWPSPRAA*RFCGIATTCVLTTA
Trigger: TGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCCGCTCTGGGGCTTGGCCAACAGTGGGCAGGGGTCCAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 90 bp AAGGCTCTCTCCTTGCTCTCTGCTGTTGGGGTCTCGGCTGCCAACTaGACCACAGGCGTGTCCTCCGCTGAGGCTGAATGCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KALSLLSAVGVSAAN*TTGVSSAEAECSCF
Trigger: GAAGCAGCTGCATTCAGCCTCAGCGGAGGACACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612220.5
CDS CCA 90 bp CTCATTTGCACCGTGCATGCTGCTGGTCTCGGTGGCCACGGGCACTaGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: LICTVHAAGLGGHGH*STRTVPQEGVELEV
Trigger: TACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACCAGTGCCCGTGGCCACCGAGACCAGCAGCATGCACGGTGCAAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp TCCTGTGTCGCCTTTACCACTGCATCCAGGTCCTTCTGGCTGTACTaGAGCAGGTCCACTATAGGTCCGGTGGACAGGGGTGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SCVAFTTASRSFWLY*SRSTIGPVDRGGPP
Trigger: TGGGGGCCCACCCCTGTCCACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAAGGCGACACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313288.9
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 90 bp CCAAGGACCAAGGTGCAAAGACAGCAGCTTGTAGCCCCGCTGGCTTaGACCATGAGTCCATCAGCCTCCGAGGTGAGGACACCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PRTKVQRQQLVAPLA*TMSPSASEVRTPGW
Trigger: CCACCCTGGTGTCCTCACCTCGGAGGCTGATGGACTCATGGTCCAAGCCAGCGGGGCTACAAGCTGCTGTCTTTGCACCTTGGTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS CCA 90 bp ACTACCTGCGTCCTTACCACTGCATCCAGGTCCTTCTGGCTGTACTaGAGCAGGTCCACTATAGGTCCGGTGGACAGGGGTGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TTCVLTTASRSFWLY*SRSTIGPVDRGGPP
Trigger: TGGGGGCCCACCCCTGTCCACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS-3UTR CAA 90 bp CTGGAGGGCCAACGCTTCCGCCTGGGCCTTGCTCCGGACCTGGGCGATCTCCTCTGTTTCTCAAAACGCTaGAAGAGGTCGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LEGQRFRLGLAPDLGDLLCFSKR*KRSEKD
Trigger: GTCCTTCTCCGACCTCTTCAAGCGTTTTGAGAAACA...GAGGAGATCGCCCAGGTCCGGAGCAAGGCCCAGGCGGAAGCGTTGGCCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS GCA 90 bp TCCGCTTTGCATTCTTCCTCGGCTCCGTGCGGAGTCTCCGCTTTGTaGTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: SALHSSSAPCGVSAL*WDSVLQGSSRVSEA
Trigger: CGCCTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAATGCAAAGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000493975.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 90 bp CTCCTTACCCCAGTTCCAGGTTCTTCCCGTGGAGCTCCTCACACCTaGTCCTCAGCTCCCGGTTCTCCTCCTGTGTCGCCTTTACCTGCT +
Preference number: 5 (lower is better)
Translates to: LLTPVPGSSRGAPHT*SSAPGSPPVSPLPA
Trigger: AGCAGGTAAAGGCGACACAGGAGGAGAACCGGGAGCTGAGGAGCAGGTGTGAGGAGCTCCACGGGAAGAACCTGGAACTGGGGTAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 90 bp GCTTTGCATTCTTCCTCGGCTCCGTGCGGAGTCTCCGCTTTGTGCTaGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAGGCGGGT +
Preference number: 5 (lower is better)
Translates to: ALHSSSAPCGVSALC*DSVLQGSSRVSEAG
Trigger: ACCCGCCTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAATGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000493975.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 90 bp TGGGCACTGGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTGCTaGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: WALAHCLDSLWEARC*QSSRLSPCSLLLGS
Trigger: AGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp CCCTGCCCACTGTTGGCCAAGCCCCAGAGCGGCCTGCAGGTTCTGTaGAATAGCTACTACCTGCGTCCTTACCACTGCATCCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PCPLLAKPQSGLQVL*NSYYLRPYHCIQVL
Trigger: AAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCCGCTCTGGGGCTTGGCCAACAGTGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS-3UTR CAA 90 bp TCTCAGAACTTCCTGGGCTCTGGGAAGAGCTTGAGCAGTCCAGGTCAGCCAGGGGGCTCTGGGAAGAGCTaGAGCAGTCCAGGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SQNFLGSGKSLSSPGQPGGSGKS*SSPGQP
Trigger: TGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCC...CCCTGGCTGACCTGGACTGCTCAAGCTCTTCCCAGAGCCCAGGAAGTTCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS TCA 90 bp TCCCAAGAAATCGAACTCCACAAGCTTGGCTTCCCGCGGACGTCCTaGGGGAGTCTCATTTGCACCGTGCATGCTGCTGGTCTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SQEIELHKLGFPRTS*GSLICTVHAAGLGG
Trigger: GCCACCGAGACCAGCAGCATGCACGGTGCAAATGAGACTCCCTCAGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCGATTTCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS TCA 90 bp CGGGCACTGGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTTaGGGTATAAGGACTGCTTCCTCAAGGCCGACTCCGAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RALVYQDCPSGGGRT*GIRTASSRPTPRKF
Trigger: GAACTTCCTCGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACCAGTGCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS GCA 90 bp GGTAATCCACTGGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTaGTGGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GNPLAHCLDSLWEAR*WQSSRLSPCSLLLG
Trigger: CCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGGATTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470136.2
CDS GCA 90 bp CCAAGCCCCAGAGCGGCCTGCAGGTTCTGTGGAATAGCTACTACCTaGGTCCTTACCACTGCATCCAGGTCCTTCTGGCTGTACTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSPRAACRFCGIATT*VLTTASRSFWLYWS
Trigger: GCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCCGCTCTGGGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 90 bp AGAGACACGTCCTGGGGGAAGTCACTGTGTGGTCGCCACTGCGGCTaGTTCCAGATGCAGGAACTGATGTGGGGACACATGGGTAGCCAA +
Preference number: 5 (lower is better)
Translates to: RDTSWGKSLCGRHCG*FQMQELMWGHMGSQ
Trigger: TTGGCTACCCATGTGTCCCCACATCAGTTCCTGCATCTGGAAGCAGCCGCAGTGGCGACCACACAGTGACTTCCCCCAGGACGTGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CCA 90 bp CCTCAAGGGAGGCTTGAGGCCGGACCTCTCTCCCAGTCTCCTTGGTaGGGGTGCCCTTTTGCTGGTGGCGCCATCAGATACATCAAATTC +
Preference number: 5 (lower is better)
Translates to: PQGRLEAGPLSQSPW*GCPFAGGAIRYIKF
Trigger: GAATTTGATGTATCTGATGGCGCCACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp CAGGGATTCTTCAGGATACAAACCCAGTCAACTCCAGGCAGAGGGTaGGAGCGTCATGCACCGGCGACACAGTGGAGGACGTCATGGACG +
Preference number: 5 (lower is better)
Translates to: QGFFRIQTQSTPGRG*ERHAPATQWRTSWT
Trigger: CGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCTGCCTGGAGTTGACTGGGTTTGTATCCTGAAGAATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS CCA 90 bp CTGTGTGGTCGCCACTGCGGCTGCTTCCAGATGCAGGAACTGATGTaGGGACACATGGGTAGCCAAGGAGTGAGCAGCCTTTCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: LCGRHCGCFQMQELM*GHMGSQGVSSLSGS
Trigger: TGAACCGGAAAGGCTGCTCACTCCTTGGCTACCCATGTGTCCCCACATCAGTTCCTGCATCTGGAAGCAGCCGCAGTGGCGACCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS-3UTR CAA 90 bp GGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCATGCGGAGTCTCCGCTTaGTGCTGGGACTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GVSALCWDSVLQGSSRVSCGVSA*CWDSVL
Trigger: CAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCA...TGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CAA 90 bp AAGGCTGGGCTTGCATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTAGCACCTTCATAGCTTaGGCCAGGTTCTTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KAGLASPRRSVSASTGFCSTFIA*ARFLGG
Trigger: GCCACCCAAGAACCTGGCCAAAGCTATGAAGGTGCT...ACAGAAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATGCAAGCCCAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS CCA 90 bp TTTCCTCAAGGGAGGCTTGAGGCCGGACCTCTCTCCCAGTCTCCTTaGTGGGGGTGCCCTTTTGCTGGTGGCGCCATCAGATACATCAAA +
Preference number: 5 (lower is better)
Translates to: FPQGRLEAGPLSQSP*WGCPFAGGAIRYIK
Trigger: TTTGATGTATCTGATGGCGCCACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp AATCCACTGGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTGCTaGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: NPLAHCLDSLWEARC*QSSRLSPCSLLLGS
Trigger: AGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470136.2
CDS TCA 90 bp GGCACTCACCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATaGTCTTCCTGTGGGAGGAGAACAGACACACAGCCATTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: GTHPWPGTQPLRTCP*SSCGRRTDTQPLPR
Trigger: CCGAGGCAATGGCTGTGTGTCTGTTCTCCTCCCACAGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGGTGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS TCA 90 bp AGAGTATTCAGGCTTGCTTCTGTTAGGCAGCTGGGCCCCAGCCACTaGCACCCACCTGACTTCAGGACTCAGATGAGGTGTGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RVFRLASVRQLGPSH*HPPDFRTQMRCGSA
Trigger: TGCTGAGCCACACCTCATCTGAGTCCTGAAGTCAGGTGGGTGTCAGTGGCTGGGGCCCAGCTGCCTAACAGAAGCAAGCCTGAATACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS TCA 90 bp AATTTAGGCCCGGAGTTAGAACAGGCTGAAGCCTGGCATGTACAGTaGGGATGGAGGGAGACAAGGCACGGGACCCTCAGATGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: NLGPELEQAEAWHVQ*GWRETRHGTLRCGV
Trigger: CACCCCACATCTGAGGGTCCCGTGCCTTGTCTCCCTCCATCCTCACTGTACATGCCAGGCTTCAGCCTGTTCTAACTCCGGGCCTAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp GCACAGGAATGTCCAGTGCTCCCAAGAAATCGAACTCCACAAGCTTaGCTTCCCGCGGACGTCCTGAGGGAGTCTCATTTGCACCGTGCA +
Preference number: 5 (lower is better)
Translates to: AQECPVLPRNRTPQA*LPADVLRESHLHRA
Trigger: TGCACGGTGCAAATGAGACTCCCTCAGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCGATTTCTTGGGAGCACTGGACATTCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 90 bp GGAATAGCTACTACCTGCGTCCTTACCACTGCATCCAGGTCCTTCTaGCTGTACTGGAGCAGGTCCACTATAGGTCCGGTGGACAGGGGT +
Preference number: 5 (lower is better)
Translates to: GIATTCVLTTASRSF*LYWSRSTIGPVDRG
Trigger: ACCCCTGTCCACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 90 bp ATGAGGTCGTCGCAGATCCTGGTCAGCTCCTCGTTCTCTTTAGTCTaGAGGAGGAAGATGAGTTGCGGGGCTTCTCCCTGCTTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MRSSQILVSSSFSLV*RRKMSCGASPCLEG
Trigger: TCCCTCCAAGCAGGGAGAAGCCCCGCAACTCATCTTCCTCCTCCAGACTAAAGAGAACGAGGAGCTGACCAGGATCTGCGACGACCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484264.1
CDS-3UTR CAA 90 bp GAACTAAGGTTTTCCTCCACGGCTTGCTCAGGGCTGCCAGACACTTTTCCTGGAGTTTTCCTCCACGGCTaGCTCAGGGCTGCCAGACAC +
Preference number: 5 (lower is better)
Translates to: ELRFSSTACSGLPDTFPGVFLHG*LRAARH
Trigger: GTGTCTGGCAGCCCTGAGCAAGCCGTGGAGGAAAAC...TCCAGGAAAAGTGTCTGGCAGCCCTGAGCAAGCCGTGGAGGAAAACCTTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS GCA 90 bp GGCCTGCAGGTTCTGTGGAATAGCTACTACCTGCGTCCTTACCACTaGATCCAGGTCCTTCTGGCTGTACTGGAGCAGGTCCACTATAGG +
Preference number: 5 (lower is better)
Translates to: GLQVLWNSYYLRPYH*IQVLLAVLEQVHYR
Trigger: CCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS-3UTR CAA 90 bp CTGGTACACAACCTCTTCGAACCTGTCCATGATCTTCCCCAGTTCCAGGTTCTTGGTGGGGGTGCCCTTTaGCTGGTGGCGCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: LVHNLFEPVHDLPQFQVLGGGAL*LVAPSD
Trigger: ATCTGATGGCGCCACCAGCAAAAGGGCACCCCCACC...AAGAACCTGGAACTGGGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS GCA 90 bp CCAGGACTGTCCCTCAGGAGGGGGTCGAACTTGAGGTATAAGGACTaGTTCCTCAAGGCCGACTCCTTAAACGAGGAAGTTCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: PGLSLRRGSNLRYKD*FLKADSLNEEVPNC
Trigger: GCAGTTTGGAACTTCCTCGTTTAAGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
CDS CCA 90 bp CTCACTGCAACCAGACTTGGTGTCACCTCCGAACGGGATGAAGTTTaGGTCATCCATTTTGTCCCAGTCGAGGTGGTAAGAGCCCCGAGA +
Preference number: 5 (lower is better)
Translates to: LTATRLGVTSERDEV*VIHFVPVEVVRAPR
Trigger: TCTCGGGGCTCTTACCACCTCGACTGGGACAAAATGGATGACCCAAACTTCATCCCGTTCGGAGGTGACACCAAGTCTGGTTGCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS-3UTR CAA 90 bp GGAGTCTCCGCTTTGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAAAAGGAGCCTCAAGTTaGCTGGCCATGCTAGGACTT +
Preference number: 5 (lower is better)
Translates to: GVSALCWDSVLQGSSRVSKGASS*LAMLGL
Trigger: AAGTCCTAGCATGGCCAGCAAACTTGAGGCTCCTTT...TGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CAA 90 bp AGGAATAAGAACCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCTTCAAGGCTCTCTCCTaGCTCTCTGCTGTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RNKNPFPSLVQVCSCHCSFKALS*LSAVGV
Trigger: GACCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAA...GGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGGTTCTTATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp CTTCTGAACTTCCTCCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATGATTCCCCAGGCCTGCTATaGGGTTACTCACACGGGCTC +
Preference number: 5 (lower is better)
Translates to: LLNFLHGLVHNLFEPVHDSPGLL*GYSHGL
Trigger: GAGCCCGTGTGAGTAACCCAATAGCAGGCCTGGGGA...ATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGAGGAAGTTCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS CCA 90 bp AGAAAAGAAAAGCAAACGTTCAGGATGAGGAGGCAACCGAAACGATaGGTGCCAGAGACAGCCCAAGGAATGAGGCAAGGGACTCGAGCG +
Preference number: 5 (lower is better)
Translates to: RKEKQTFRMRRQPKR*VPETAQGMRQGTRA
Trigger: CGCTCGAGTCCCTTGCCTCATTCCTTGGGCTGTCTCTGGCACCCATCGTTTCGGTTGCCTCCTCATCCTGAACGTTTGCTTTTCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS-3UTR CAA 90 bp CATCCCCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTAGAATTCCATGAGGCTTTGGCCAGGTTCTaGGGTGGCACATTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HPPGGRCQPPLVSVEFHEALARF*GGTFSF
Trigger: GAAAGAAAATGTGCCACCCAAGAACCTGGCCAAAGC...CTCATGGAATTCTACAGAAACCAGTGGAGGCTGACACCGACCTCCTGGGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CAA 90 bp AGGAATAAGAACCCCTTCCCCTCCCTTGTTCAGGTGTGCTCTTGCCATTGCTCCAGGAGGGGGTCGAACTaGAGGTATAAGGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: RNKNPFPSLVQVCSCHCSRRGSN*RYKDCF
Trigger: GAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCT...GGAGCAATGGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGGTTCTTATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS-3UTR CAA 90 bp CCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATAACCCCTTCCCCTCCCTaGTTCAGGTGTGCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: PSNYSPHHSDSYPALFKITPSPP*FRCALA
Trigger: GGCAAGAGCACACCTGAACAAGGGAGGGGAAGGGGT...TATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS CCA 90 bp CAGATACATCAAATTCTAGTTTTACAGGTCCGCTCCTCGAGGAGCTaGCCATTTGGCCTGCAGCCACTTCTTCCTGAGGACTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: QIHQILVLQVRSSRS*PFGLQPLLPEDSGS
Trigger: TGACCCTGAGTCCTCAGGAAGAAGTGGCTGCAGGCCAAATGGCCAGCTCCTCGAGGAGCGGACCTGTAAAACTAGAATTTGATGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS TCA 90 bp CTTCATAGCTTTGGCCAGGTTCTTGGGTGGCACATTTTCTTTCTGTaGCACACGAAGAACAGACGATCTTCCGGTAACTTCTGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LHSFGQVLGWHIFFL*HTKNRRSSGNFWWR
Trigger: TCGCCACCAGAAGTTACCGGAAGATCGTCTGTTCTTCGTGTGTCACAGAAAGAAAATGTGCCACCCAAGAACCTGGCCAAAGCTATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000467746.6
ENST00000484651.5
ENST00000493975.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS TCA 90 bp CCCAGGAGGTCGGTGTCAGCCTCCACTGGTTTCTGTAGAATTCCATaGGTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: PRRSVSASTGFCRIP*VVLASTSLMSCWLL
Trigger: TAAAAGCCAACAGCTCATCAAGGAAGTGGATGCCAAAACTACTCATGGAATTCTACAGAAACCAGTGGAGGCTGACACCGACCTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650779.1
CDS-3UTR CAA 90 bp TCTCCATTTAAAATTCCTGGTTCTCTTCGCCCCTTGCTTCTAGTTTCAGTAAACCTCCTGCGGGGCCTTTaGCTGCCTCACTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SPFKIPGSLRPLLLVSVNLLRGL*LPHCCF
Trigger: AAAGCAGCAGTGAGGCAGCAAAAGGCCCCGCAGGAG...GTTTACTGAAACTAGAAGCAAGGGGCGAAGAGAACCAGGAATTTTAAATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS CCA 90 bp TTAAAACCAAACTTTTGTCATAGTTGGAGAATGGCCTGTGGGTATTaGAGAAGCCACCTTAGAGGTGGAATTGCGTGCGTGGCGTGCTTT +
Preference number: 5 (lower is better)
Translates to: LKPNFCHSWRMACGY*RSHLRGGIACVACF
Trigger: AAAGCACGCCACGCACGCAATTCCACCTCTAAGGTGGCTTCTCCAATACCCACAGGCCATTCTCCAACTATGACAAAAGTTTGGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS-3UTR CAA 90 bp GTAGTTTTGGCATCCACTTCCTTGATGAGCTGTTGGTTCTCTTTCTGTGTCCAGTCATTGCTGACATTTTaGTCGTTTAAGACCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VVLASTSLMSCWFSFCVQSLLTF*SFKTCR
Trigger: TCTGCAGGTCTTAAACGACAAAAATGTCAGCAATGA...CTGGACACAGAAAGAGAACCAACAGCTCATCAAGGAAGTGGATGCCAAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS-3UTR CAA 90 bp CCGTCAAACTACTCACCCCACCACTCTGACTCTTACCCTGCCCTCTTTAAAATAGGCCAGATCTCTTCTTaGATTCTCCATTTAAAATTC +
Preference number: 5 (lower is better)
Translates to: PSNYSPHHSDSYPALFKIGQISS*ILHLKF
Trigger: GAATTTTAAATGGAGAATCAAAGAAGAGATCTGGCC...TATTTTAAAGAGGGCAGGGTAAGAGTCAGAGTGGTGGGGTGAGTAGTTTGACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS GCA 72 bp CCGCGCCGCCGCCGCCAGGAAGGAGGGGTCCGCGTCTaGTCCACGCCGGGGGCCAAGCCTAGCTGCTACCGC +
Preference number: 6 (lower is better)
Translates to: PRRRRQEGGVRV*STPGAKPSCYR
Trigger: GCGGTAGCAGCTAGGCTTGGCCCCCGGCGTGGAGCAGACGCGGACCCCTCCTTCCTGGCGGCGGCGGCGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313288.9
ENST00000467746.6
ENST00000484651.5
ENST00000612220.5
CDS TCA 72 bp CAGACTCATTCTGCCCGCCCGCCCGTTGCCGGGCTCTaGGCCCGCGCCGCCGCCGCCAGGAAGGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: QTHSARPPVAGL*ARAAAARKEGS
Trigger: GGACCCCTCCTTCCTGGCGGCGGCGGCGCGGGCTCAGAGCCCGGCAACGGGCGGGCGGGCAGAATGAGTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313288.9
ENST00000467746.6
ENST00000484651.5
ENST00000612220.5
CDS GCA 72 bp CAACGCCATGCCCAGGCCGGAGAGTCCCGGGGAGGCTaGTGGTGGGCAGCTGACTGCGGGGACACTGGGTGG +
Preference number: 6 (lower is better)
Translates to: QRHAQAGESRGG*WWAADCGDTGW
Trigger: CCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGCATGGCGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp GACTCATTCTCGGGGCGCCCGCTCCGCCGTCGGTCTTaGCCCAGCTCTAGCCGCCCCTGGCCACCATCCAGG +
Preference number: 6 (lower is better)
Translates to: DSFSGRPLRRRS*PSSSRPWPPSR
Trigger: CCTGGATGGTGGCCAGGGGCGGCTAGAGCTGGGCCAAGACCGACGGCGGAGCGGGCGCCCCGAGAATGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493975.5
CDS CCA 72 bp CATGCCCAGGCCGGAGAGTCCCGGGGAGGCTGCTGGTaGGCAGCTGACTGCGGGGACACTGGGTGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: HAQAGESRGGCW*AADCGDTGWKP
Trigger: AGGCTTCCACCCAGTGTCCCCGCAGTCAGCTGCCCACCAGCAGCCTCCCCGGGACTCTCCGGCCTGGGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CAA 72 bp TTTAAGACCTGCAGACTCATTCTGCCCGCCCGCCCGTaGCCGGGCTCTGAGCCCGCGCCGCCGCCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: FKTCRLILPARP*PGSEPAPPPPG
Trigger: TCCTGGCGGCGGCGGCGCGGGCTCAGAGCCCGGCAACGGGCGGGCGGGCAGAATGAGTCTGCAGGTCTTAAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313288.9
ENST00000467746.6
ENST00000484651.5
ENST00000612220.5
CDS CCA 72 bp GGCAGAGGGTGGGAGCGTCATGCACCGGCGACACAGTaGAGGACGTCATGGACGGGCAGGGAGGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: GRGWERHAPATQ*RTSWTGREAAA
Trigger: TGCCGCTGCCTCCCTGCCCGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS CCA 72 bp GGGGACACTGGGTGGAAGCCTGGACCCTCAGCGACCTaGGCAGTAGTGACAGGCCAGGGGCCGGCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: GDTGWKPGPSAT*AVVTGQGPAAL
Trigger: GAGAGCTGCCGGCCCCTGGCCTGTCACTACTGCCCAGGTCGCTGAGGGTCCAGGCTTCCACCCAGTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 72 bp AGACAGGGACCTGGCTCCTCCGTGGCAGGCCCAGCATaGAACTGTTCAGCCGCTGGCTGGCCCAGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RQGPGSSVAGPA*NCSAAGWPSLV
Trigger: GACCAGGCTGGGCCAGCCAGCGGCTGAACAGTTGCATGCTGGGCCTGCCACGGAGGAGCCAGGTCCCTGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 72 bp GATGTGCGTCGTGCTTCGTGGTGGTCCTGGAGGGACTaGAAGGGCCAGGCGGTCACCTGCCGCCGGCTGACA +
Preference number: 6 (lower is better)
Translates to: DVRRASWWSWRD*KGQAVTCRRLT
Trigger: TGTCAGCCGGCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp GAGCTCCAGGATGTGCGTCGTGCTTCGTGGTGGTCCTaGAGGGACTGCAAGGGCCAGGCGGTCACCTGCCGC +
Preference number: 6 (lower is better)
Translates to: ELQDVRRASWWS*RDCKGQAVTCR
Trigger: GCGGCAGGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CAGCCGGCCTCCGGAACCACCCTGTCTGCACCTCCCTaGGGACCATCTGGCGACGGTAGCTCACAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: QPASGTTLSAPP*GPSGDGSSQWC
Trigger: GCACCACTGTGAGCTACCGTCGCCAGATGGTCCCCAGGGAGGTGCAGACAGGGTGGTTCCGGAGGCCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CAA 90 bp GTGGGCCTCCCGCCTTGGATACTGCATGCCCTGGGTCCCCAACCCTaGGGACCCAAGCGCTCGGACAGCCCAGACACCTTTCCGAGGTGC +
Preference number: 6 (lower is better)
Translates to: VGLPPWILHALGPQP*GPKRSDSPDTFPRC
Trigger: GCACCTCGGAAAGGTGTCTGGGCTGTCCGAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp CTGCAGGGGTGCTCCTCCGCAGGCTTCCTTAGGGATTaGACCAGGAGGCGAAGTGGCCACTGCTGCGGGAGC +
Preference number: 6 (lower is better)
Translates to: LQGCSSAGFLRD*TRRRSGHCCGS
Trigger: GCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAGGAAGCCTGCGGAGGAGCACCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 72 bp CCCAAGCGCTCGGACAGCCCAGACACCTTTCCGAGGTaGCCCAGGCCCCGGTGCACCAGCGCTGTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: PKRSDSPDTFPR*PRPRCTSAVSN
Trigger: ATTTGAGACAGCGCTGGTGCACCGGGGCCTGGGGCACCTCGGAAAGGTGTCTGGGCTGTCCGAGCGCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp GAACCCTCTGGCGGCCTCGCAGGCACCTTCCAGGCCTaGTCTGGGCAGATGGATGGCCCAGACATCCCTCCT +
Preference number: 6 (lower is better)
Translates to: EPSGGLAGTFQA*SGQMDGPDIPP
Trigger: AGGAGGGATGTCTGGGCCATCCATCTGCCCAGAGCAGGCCTGGAAGGTGCCTGCGAGGCCGCCAGAGGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CACAGCCCCACTGCTAGCTCAGCATCTGCACAACTGTaGGGCCTGCCAAGCCCTGGCTCCGTGGGAGCCACC +
Preference number: 6 (lower is better)
Translates to: HSPTASSASAQL*GLPSPGSVGAT
Trigger: GGTGGCTCCCACGGAGCCAGGGCTTGGCAGGCCCCACAGTTGTGCAGATGCTGAGCTAGCAGTGGGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CAA 90 bp CCACCGTGCCGGCATTCCTCCTCGGCTCCGTGCGGAGTCTCCGCTTaGCATTCTTCCTCGGCTCCGTGCGGAGTCTCCGCTTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PPCRHSSSAPCGVSA*HSSSAPCGVSALCW
Trigger: CCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAATGCAAAGCGGAGACTCCGCACGGAGCCGAGGAGGAATGCCGGCACGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS TCA 72 bp CTGGGGGACCCGCAAGCCTCGAACTCAGGGAGAAAGTaGCTCGGAGGAAGCCTTCTGGCGGCCTGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LGDPQASNSGRK*LGGSLLAAWRS
Trigger: GCTCCTCCAGGCCGCCAGAAGGCTTCCTCCGAGTCACTTTCTCCCTGAGTTCGAGGCTTGCGGGTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS GCA 72 bp CTTAGGGATTGCACCAGGAGGCGAAGTGGCCACTGCTaGGGGAGCACAGACCCCACCGTGCCGGCATTCCTC +
Preference number: 6 (lower is better)
Translates to: LRDCTRRRSGHC*GSTDPTVPAFL
Trigger: GAGGAATGCCGGCACGGTGGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 72 bp AGGGTGGAGTGGGGTAGGCCACGGCGGGACAGACTCTaGTCCCACCACAGCCCCACTGCTAGCTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: RVEWGRPRRDRL*SHHSPTASSAS
Trigger: AGATGCTGAGCTAGCAGTGGGGCTGTGGTGGGAGCAGAGTCTGTCCCGCCGTGGCCTACCCCACTCCACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp TGGGAGCCGGTATGGCGAGCTCCAGGATGTGCGTCGTaGTTCGTGGTGGTCCTGGAGGGACTGCAAGGGCCA +
Preference number: 6 (lower is better)
Translates to: WEPVWRAPGCAS*FVVVLEGLQGP
Trigger: TGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATACCGGCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp CCACCTTTCAGTGGGCCTCCCGCCTTGGATACTGCATaGCCTGGGTCCCCAACCCTTGGGACCCAAGCGCTC +
Preference number: 6 (lower is better)
Translates to: PPFSGPPALDTA*PGSPTLGTQAL
Trigger: GAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp ACTCGGGCTCACGGCAGCAAGAACCACACTCACTGCTaGAAGGCCACCAGAGGCCAACGCCATGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: TRAHGSKNHTHC*KATRGQRHAQA
Trigger: GGCCTGGGCATGGCGTTGGCCTCTGGTGGCCTTGCAGCAGTGAGTGTGGTTCTTGCTGCCGTGAGCCCGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 72 bp CTGCAGACTCATTCTGTGCTCAATGCACAGGTGCGGTaGCGCCTCCAGGGCCGGCCGAGAAGAGAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: LQTHSVLNAQVR*RLQGRPRREAA
Trigger: TGCGGCCTCTCTTCTCGGCCGGCCCTGGAGGCGGCACCGCACCTGTGCATTGAGCACAGAATGAGTCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651472.1
CDS CCA 72 bp GGGAGGCTTGAGGCCGGACCTCTCTCCCAGTCTCCTTaGTGGGGGTGCCCTTTTGCTGGTGGCGCCATCAGA +
Preference number: 6 (lower is better)
Translates to: GRLEAGPLSQSP*WGCPFAGGAIR
Trigger: TCTGATGGCGCCACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 72 bp CTCCAAGGCAGGCTGCCCCTGCTGATGGGTGGGCACTaGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGT +
Preference number: 6 (lower is better)
Translates to: LQGRLPLLMGGH*LTAWTACGKRG
Trigger: ACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGCCCACCCATCAGCAGGGGCAGCCTGCCTTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 72 bp ACCGTGCATGCTGCTGGTCTCGGTGGCCACGGGCACTaGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAA +
Preference number: 6 (lower is better)
Translates to: TVHAAGLGGHGH*STRTVPQEGVE
Trigger: TTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACCAGTGCCCGTGGCCACCGAGACCAGCAGCATGCACGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 72 bp TATGGCGAGCTCCAGGATGTGCGTCGTGCTTCGTGGTaGTCCTGGAGGGACTGCAAGGGCCAGGCGGTCACC +
Preference number: 6 (lower is better)
Translates to: YGELQDVRRASW*SWRDCKGQAVT
Trigger: GGTGACCGCCTGGCCCTTGCAGTCCCTCCAGGACCACCACGAAGCACGACGCACATCCTGGAGCTCGCCATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CCAGGGTGGCCTTGCACAGCCGTGACCACCTTTCAGTaGGCCTCCCGCCTTGGATACTGCATGCCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PGWPCTAVTTFQ*ASRLGYCMPWV
Trigger: GACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCACGGCTGTGCAAGGCCACCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp AGCTTCCTAAGCTGCCAGGAGATGCGTCTGGACTCGTaGGAGGGCGGGAGGAAAGGGGCGACACTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: SFLSCQEMRLDS*EGGRKGATLGL
Trigger: GAGCCCGAGTGTCGCCCCTTTCCTCCCGCCCTCCCACGAGTCCAGACGCATCTCCTGGCAGCTTAGGAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp GGGGCAGGCATTAGCTGTGGGTACCACGCCGTCTGCTaGAGAGCACCCAGGCTTGGTGTCTGGGGACCTGCA +
Preference number: 6 (lower is better)
Translates to: GAGISCGYHAVC*RAPRLGVWGPA
Trigger: TGCAGGTCCCCAGACACCAAGCCTGGGTGCTCTCCAGCAGACGGCGTGGTACCCACAGCTAATGCCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484264.1
CDS CAA 72 bp CCTCCACAGGAGGCGTTGAGCACCTCCGCTCCAACATaGCTGCTGTGGGCAGAACCCTCTGGCGGCCTCGCA +
Preference number: 6 (lower is better)
Translates to: PPQEALSTSAPT*LLWAEPSGGLA
Trigger: TGCGAGGCCGCCAGAGGGTTCTGCCCACAGCAGCAATGTTGGAGCGGAGGTGCTCAACGCCTCCTGTGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CAA 90 bp GGATGGCAGGGATGGCGGGTCAGGCTGTTGGACCCCTGCCCACTGTaGGCCAAGCCCCAGAGCGGCCTGCAGGTTCTGTGGAATAGCTAC +
Preference number: 6 (lower is better)
Translates to: GWQGWRVRLLDPCPL*AKPQSGLQVLWNSY
Trigger: GTAGCTATTCCACAGAACCTGCAGGCCGCTCTGGGGCTTGGCCAACAGTGGGCAGGGGTCCAACAGCCTGACCCGCCATCCCTGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS TCA 72 bp CTCTCAGGAGCAGAGGTGTGTGCACAGGTAAGGGTCTaGGTGCCATCTGCTGGCACGGGGGTGCCCACACCC +
Preference number: 6 (lower is better)
Translates to: LSGAEVCAQVRV*VPSAGTGVPTP
Trigger: GGGTGTGGGCACCCCCGTGCCAGCAGATGGCACTCAGACCCTTACCTGTGCACACACCTCTGCTCCTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 72 bp TTCCTTAGGGATTGCACCAGGAGGCGAAGTGGCCACTaGTGCGGGAGCACAGACCCCACCGTGCCGGCATTC +
Preference number: 6 (lower is better)
Translates to: FLRDCTRRRSGH*CGSTDPTVPAF
Trigger: GAATGCCGGCACGGTGGGGTCTGTGCTCCCGCAGCAGTGGCCACTTCGCCTCCTGGTGCAATCCCTAAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS GCA 72 bp CTCCACCTCCTGCGGGGCCTTTTGCTGCCTCACTGCTaGTTTCCTCAAGGGAGGCTTGAGGCCGGACCTCTC +
Preference number: 6 (lower is better)
Translates to: LHLLRGLLLPHC*FPQGRLEAGPL
Trigger: GAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAAAGCAGCAGTGAGGCAGCAAAAGGCCCCGCAGGAGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 72 bp CCTCACTACCACCAGCTTCCCCGCAACTCGCCTCAGTaGTTCCACGGCCGGGCCCATGTTGAAGGGACTCGT +
Preference number: 6 (lower is better)
Translates to: PHYHQLPRNSPQ*FHGRAHVEGTR
Trigger: ACGAGTCCCTTCAACATGGGCCCGGCCGTGGAAGCACTGAGGCGAGTTGCGGGGAAGCTGGTGGTAGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp AACCCAGTCAACTCCAGGCAGAGGGTGGGAGCGTCATaGACCGGCGACACAGTGGAGGACGTCATGGACGGG +
Preference number: 6 (lower is better)
Translates to: NPVNSRQRVGAS*TGDTVEDVMDG
Trigger: CCCGTCCATGACGTCCTCCACTGTGTCGCCGGTGCATGACGCTCCCACCCTCTGCCTGGAGTTGACTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS GCA 72 bp GACACTCGGGCTCACGGCAGCAAGAACCACACTCACTaGTGCAAGGCCACCAGAGGCCAACGCCATGCCCAG +
Preference number: 6 (lower is better)
Translates to: DTRAHGSKNHTH*CKATRGQRHAQ
Trigger: CTGGGCATGGCGTTGGCCTCTGGTGGCCTTGCAGCAGTGAGTGTGGTTCTTGCTGCCGTGAGCCCGAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS GCA 72 bp GAAGGGGCAGGCATTAGCTGTGGGTACCACGCCGTCTaGTGGAGAGCACCCAGGCTTGGTGTCTGGGGACCT +
Preference number: 6 (lower is better)
Translates to: EGAGISCGYHAV*WRAPRLGVWGP
Trigger: AGGTCCCCAGACACCAAGCCTGGGTGCTCTCCAGCAGACGGCGTGGTACCCACAGCTAATGCCTGCCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484264.1
CDS GCA 72 bp AAGCGGCTCAAAACAATAGACGGCGCGTACGGGGCCTaGAGCGGCCACGGGACCGTGGGAAGCAGTCAGTAC +
Preference number: 6 (lower is better)
Translates to: KRLKTIDGAYGA*SGHGTVGSSQY
Trigger: GTACTGACTGCTTCCCACGGTCCCGTGGCCGCTGCAGGCCCCGTACGCGCCGTCTATTGTTTTGAGCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CCA 72 bp CGCCTTGGATACTGCATGCCCTGGGTCCCCAACCCTTaGGACCCAAGCGCTCGGACAGCCCAGACACCTTTC +
Preference number: 6 (lower is better)
Translates to: RLGYCMPWVPNP*DPSARTAQTPF
Trigger: GAAAGGTGTCTGGGCTGTCCGAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp TTTCAGTGGGCCTCCCGCCTTGGATACTGCATGCCCTaGGTCCCCAACCCTTGGGACCCAAGCGCTCGGACA +
Preference number: 6 (lower is better)
Translates to: FQWASRLGYCMP*VPNPWDPSART
Trigger: TGTCCGAGCGCTTGGGTCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CACAGCCGTGACCACCTTTCAGTGGGCCTCCCGCCTTaGATACTGCATGCCCTGGGTCCCCAACCCTTGGGA +
Preference number: 6 (lower is better)
Translates to: HSRDHLSVGLPP*ILHALGPQPLG
Trigger: TCCCAAGGGTTGGGGACCCAGGGCATGCAGTATCCAAGGCGGGAGGCCCACTGAAAGGTGGTCACGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CCTCCCTGGGGACCATCTGGCGACGGTAGCTCACAGTaGTGCCTGCAGACACCCAGCCCCTTTGTGTGCCTA +
Preference number: 6 (lower is better)
Translates to: PPWGPSGDGSSQ*CLQTPSPFVCL
Trigger: TAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAGATGGTCCCCAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp CGAACTCAGGGAGAAAGTGACTCGGAGGAAGCCTTCTaGCGGCCTGGAGGAGCTCGGGAGAGCAGCAGACCC +
Preference number: 6 (lower is better)
Translates to: RTQGESDSEEAF*RPGGARESSRP
Trigger: GGGTCTGCTGCTCTCCCGAGCTCCTCCAGGCCGCCAGAAGGCTTCCTCCGAGTCACTTTCTCCCTGAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS TCA 72 bp CCAGCCACTGACACCCACCTGACTTCAGGACTCAGATaGGGTGTGGCTCAGCAGGCCCTGCAAGGGCCGCTT +
Preference number: 6 (lower is better)
Translates to: PATDTHLTSGLR*GVAQQALQGPL
Trigger: AAGCGGCCCTTGCAGGGCCTGCTGAGCCACACCTCATCTGAGTCCTGAAGTCAGGTGGGTGTCAGTGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp TCCTTGCTCTCTGCTGTTGGGGTCTCGGCTGCCAACTaGACCACAGGCGTGTCCTCCGCTGAGGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: SLLSAVGVSAAN*TTGVSSAEAEC
Trigger: GCATTCAGCCTCAGCGGAGGACACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 72 bp CCTCCTGCCGCCCTCAGCTGCCTCGCAAACCAGCTATaGTGTGACTCCTGCACCCTGTCTCGTTCACAGGTC +
Preference number: 6 (lower is better)
Translates to: PPAALSCLANQL*CDSCTLSRSQV
Trigger: GACCTGTGAACGAGACAGGGTGCAGGAGTCACAGCATAGCTGGTTTGCGAGGCAGCTGAGGGCGGCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS GCA 72 bp GGGGACCATCTGGCGACGGTAGCTCACAGTGGTGCCTaGAGACACCCAGCCCCTTTGTGTGCCTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: GDHLATVAHSGA*RHPAPLCAYSS
Trigger: AGAGCTGTAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAGATGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp AGGCTTGAGGCCGGACCTCTCTCCCAGTCTCCTTGGTaGGGGTGCCCTTTTGCTGGTGGCGCCATCAGATAC +
Preference number: 6 (lower is better)
Translates to: RLEAGPLSQSPW*GCPFAGGAIRY
Trigger: GTATCTGATGGCGCCACCAGCAAAAGGGCACCCCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CAA 90 bp GCCAAGGACCAAGGTGCAAAGACAGCAGCTTGTAGCCCCGCTGGCTaGGACCATGAGTCCATCAGCCTCCGAGGTGAGGACACCAGGGTG +
Preference number: 6 (lower is better)
Translates to: AKDQGAKTAACSPAG*DHESISLRGEDTRV
Trigger: CACCCTGGTGTCCTCACCTCGGAGGCTGATGGACTCATGGTCCAAGCCAGCGGGGCTACAAGCTGCTGTCTTTGCACCTTGGTCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS TCA 72 bp CAACTCGCCTCAGTGCTTCCACGGCCGGGCCCATGTTaGAGGGACTCGTGTGTTAGGAAAAGGGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: QLASVLPRPGPC*RDSCVRKRGLR
Trigger: CCTGAGGCCCCTTTTCCTAACACACGAGTCCCTTCAACATGGGCCCGGCCGTGGAAGCACTGAGGCGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS TCA 72 bp AGCACCTCCAGGAGCCCAAGCTTTTGGGAGGCCAGATaGGGCCTGGTGTTCCCGTCCTGCCAGACACCTACA +
Preference number: 6 (lower is better)
Translates to: STSRSPSFWEAR*GLVFPSCQTPT
Trigger: TGTAGGTGTCTGGCAGGACGGGAACACCAGGCCTCATCTGGCCTCCCAAAAGCTTGGGCTCCTGGAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS TCA 72 bp CAGCTGCGTCCTGTGAGGACACCAGGCTGTCTCTACTaGCCTCACTGTGGGTCAGGGTGGCCCAGGAATTGC +
Preference number: 6 (lower is better)
Translates to: QLRPVRTPGCLY*PHCGSGWPRNC
Trigger: GCAATTCCTGGGCCACCCTGACCCACAGTGAGGTCAGTAGAGACAGCCTGGTGTCCTCACAGGACGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CCA 72 bp GGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTGTTaGGGTCTCGGCTGCCAACTGCACCACAGGCGTGTC +
Preference number: 6 (lower is better)
Translates to: GRVQGSLLALCC*GLGCQLHHRRV
Trigger: GACACGCCTGTGGTGCAGTTGGCAGCCGAGACCCCAACAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 72 bp ACGTGGCCTCGGTGGCCCGGGCACTCACCCATGGCCTaGTACACAACCTCTTCGAACCTGTCCATGATCTTC +
Preference number: 6 (lower is better)
Translates to: TWPRWPGHSPMA*YTTSSNLSMIF
Trigger: GAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGGGTGAGTGCCCGGGCCACCGAGGCCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CAA 90 bp GCTATTGGGTTACTCACACGGGCTCTGACACAGGGAAGGAGGTTGTaGGGGTACGGGGTCAGGGCCACATCACAGGCCTCTGCGGAGATG +
Preference number: 6 (lower is better)
Translates to: AIGLLTRALTQGRRL*GYGVRATSQASAEM
Trigger: CATCTCCGCAGAGGCCTGTGATGTGGCCCTGACCCCGTACCCCAACAACCTCCTTCCCTGTGTCAGAGCCCGTGTGAGTAACCCAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS GCA 72 bp CTGGCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTaGTGGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LAHCLDSLWEAR*WQSSRLSPCSL
Trigger: CAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 72 bp CTCAGCTGCCTCGCAAACCAGCTATGCTGTGACTCCTaGACCCTGTCTCGTTCACAGGTCATCCCATGCCCC +
Preference number: 6 (lower is better)
Translates to: LSCLANQLCCDS*TLSRSQVIPCP
Trigger: GGGGCATGGGATGACCTGTGAACGAGACAGGGTGCAGGAGTCACAGCATAGCTGGTTTGCGAGGCAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS GCA 72 bp TCCTGGGGGAAGTCACTGTGTGGTCGCCACTGCGGCTaGTTCCAGATGCAGGAACTGATGTGGGGACACATG +
Preference number: 6 (lower is better)
Translates to: SWGKSLCGRHCG*FQMQELMWGHM
Trigger: CATGTGTCCCCACATCAGTTCCTGCATCTGGAAGCAGCCGCAGTGGCGACCACACAGTGACTTCCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CCA 72 bp GCTCACTGCCTGGACAGCTTGTGGGAAGCGAGGTGCTaGCAGAGTTCAAGGCTCTCTCCTTGCTCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: AHCLDSLWEARC*QSSRLSPCSLL
Trigger: CAGCAGAGAGCAAGGAGAGAGCCTTGAACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CCA 72 bp ACAGGTCATCCCATGCCCCCGTGGCAAGGGGAGGCTTaGCCAAGGACCAAGGTGCAAAGACAGCAGCTTGTA +
Preference number: 6 (lower is better)
Translates to: TGHPMPPWQGEA*PRTKVQRQQLV
Trigger: TACAAGCTGCTGTCTTTGCACCTTGGTCCTTGGCCAAGCCTCCCCTTGCCACGGGGGCATGGGATGACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS CCA 72 bp CGCCACTGCGGCTGCTTCCAGATGCAGGAACTGATGTaGGGACACATGGGTAGCCAAGGAGTGAGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: RHCGCFQMQELM*GHMGSQGVSSL
Trigger: AAGGCTGCTCACTCCTTGGCTACCCATGTGTCCCCACATCAGTTCCTGCATCTGGAAGCAGCCGCAGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CAA 72 bp TTTTGCTGCCTCACTGCTGCTTTCCTCAAGGGAGGCTaGAGGCCGGACCTCTCTCCCAGTCTCCTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: FCCLTAAFLKGG*RPDLSPSLLGG
Trigger: CCCACCAAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAAAGCAGCAGTGAGGCAGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CAA 72 bp CAAGGTGCAAAGACAGCAGCTTGTAGCCCCGCTGGCTaGGACCATGAGTCCATCAGCCTCCGAGGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: QGAKTAACSPAG*DHESISLRGED
Trigger: GTCCTCACCTCGGAGGCTGATGGACTCATGGTCCAAGCCAGCGGGGCTACAAGCTGCTGTCTTTGCACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS CAA 72 bp TTACTCACACGGGCTCTGACACAGGGAAGGAGGTTGTaGGGGTACGGGGTCAGGGCCACATCACAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LLTRALTQGRRL*GYGVRATSQAS
Trigger: AGAGGCCTGTGATGTGGCCCTGACCCCGTACCCCAACAACCTCCTTCCCTGTGTCAGAGCCCGTGTGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651817.1
CDS CAA 90 bp GTCTCCGCTTTGCATTCTTCCTCGGCTCCGTGCGGAGTCTCCGCTTaGTGCTGGGACTCTGTCCTGCAAGGGTCTTCTAGGGTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: VSALHSSSAPCGVSA*CWDSVLQGSSRVSE
Trigger: CTCTGAGACCCTAGAAGACCCTTGCAGGACAGAGTCCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAATGCAAAGCGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000484651.5
ENST00000493975.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CAA 90 bp GGCACAGGAATGTCCAGTGCTCCCAAGAAATCGAACTCCACAAGCTaGGCTTCCCGCGGACGTCCTGAGGGAGTCTCATTTGCACCGTGC +
Preference number: 6 (lower is better)
Translates to: GTGMSSAPKKSNSTS*ASRGRPEGVSFAPC
Trigger: GCACGGTGCAAATGAGACTCCCTCAGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCGATTTCTTGGGAGCACTGGACATTCCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CAA 90 bp CTGGCGACGGTAGCTCACAGTGGTGCCTGCAGACACCCAGCCCCTTaGTGTGCCTACAGCTCTCTTAGGGACAATTTAGGCCCGGAGTTA +
Preference number: 6 (lower is better)
Translates to: LATVAHSGACRHPAP*CAYSSLRDNLGPEL
Trigger: TAACTCCGGGCCTAAATTGTCCCTAAGAGAGCTGTAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTACCGTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CAA 90 bp ACGGGCACTGGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTaGAGGTATAAGGACTGCTTCCTCAAGGCCGACTCCGAGGAAGTT +
Preference number: 6 (lower is better)
Translates to: TGTGLPGLSLRRGSN*RYKDCFLKADSEEV
Trigger: AACTTCCTCGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACCAGTGCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS TCA 72 bp ATCGAACTCCACAAGCTTGGCTTCCCGCGGACGTCCTaGGGGAGTCTCATTTGCACCGTGCATGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: IELHKLGFPRTS*GSLICTVHAAG
Trigger: ACCAGCAGCATGCACGGTGCAAATGAGACTCCCTCAGGACGTCCGCGGGAAGCCAAGCTTGTGGAGTTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000484651.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS TCA 72 bp GTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTTaGGGTATAAGGACTGCTTCCTCAAGGCCGACTCCG +
Preference number: 6 (lower is better)
Translates to: VYQDCPSGGGRT*GIRTASSRPTP
Trigger: CGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS CCA 72 bp GCCTTTACCACTGCATCCAGGTCCTTCTGGCTGTACTaGAGCAGGTCCACTATAGGTCCGGTGGACAGGGGT +
Preference number: 6 (lower is better)
Translates to: AFTTASRSFWLY*SRSTIGPVDRG
Trigger: ACCCCTGTCCACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313288.9
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 72 bp AAGGTGCAAAGACAGCAGCTTGTAGCCCCGCTGGCTTaGACCATGAGTCCATCAGCCTCCGAGGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: KVQRQQLVAPLA*TMSPSASEVRT
Trigger: TGTCCTCACCTCGGAGGCTGATGGACTCATGGTCCAAGCCAGCGGGGCTACAAGCTGCTGTCTTTGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404054.3
ENST00000470808.1
CDS CCA 72 bp GTCCTTACCACTGCATCCAGGTCCTTCTGGCTGTACTaGAGCAGGTCCACTATAGGTCCGGTGGACAGGGGT +
Preference number: 6 (lower is better)
Translates to: VLTTASRSFWLY*SRSTIGPVDRG
Trigger: ACCCCTGTCCACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp CTGTTGGCCAAGCCCCAGAGCGGCCTGCAGGTTCTGTaGAATAGCTACTACCTGCGTCCTTACCACTGCATC +
Preference number: 6 (lower is better)
Translates to: LLAKPQSGLQVL*NSYYLRPYHCI
Trigger: GATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCCGCTCTGGGGCTTGGCCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CAA 72 bp GGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTaGAGGTATAAGGACTGCTTCCTCAAGGCCGACTCC +
Preference number: 6 (lower is better)
Translates to: GLPGLSLRRGSN*RYKDCFLKADS
Trigger: GGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CAA 90 bp ACGGGCACTGGTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTaGAGGTATAAGGACTGCTTCCTCAAGGCCGACTCCTTAAACGAG +
Preference number: 6 (lower is better)
Translates to: TGTGLPGLSLRRGSN*RYKDCFLKADSLNE
Trigger: CTCGTTTAAGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGACCAGTGCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
CDS CAA 90 bp CCTGTGCGTCTGTGGATCCCGCAGAGGTGTCTGAAAAGTCACCTGTaGCGGAGTGAGGAGGAGAGCACCTTCATAGCTTTGGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: PVRLWIPQRCLKSHL*RSEEESTFIALARF
Trigger: GAACCTGGCCAAAGCTATGAAGGTGCTCTCCTCCTCACTCCGCAACAGGTGACTTTTCAGACACCTCTGCGGGATCCACAGACGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS TCA 72 bp GTCTACCAGGACTGTCCCTCAGGAGGGGGTCGAACTTaGGGTATAAGGACTGCTTCCTCAAGGCCGACTCCT +
Preference number: 6 (lower is better)
Translates to: VYQDCPSGGGRT*GIRTASSRPTP
Trigger: AGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
CDS GCA 72 bp GCCCCGGTGCACCAGCGCTGTCTCAAATCTCACAGATaGCTGATCATAGCCGAGTCGTCTGTCACACAACAG +
Preference number: 6 (lower is better)
Translates to: APVHQRCLKSHR*LIIAESSVTQQ
Trigger: CTGTTGTGTGACAGACGACTCGGCTATGATCAGGCATCTGTGAGATTTGAGACAGCGCTGGTGCACCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS GCA 72 bp AGAGCGGCCTGCAGGTTCTGTGGAATAGCTACTACCTaGGTCCTTACCACTGCATCCAGGTCCTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RAACRFCGIATT*VLTTASRSFWL
Trigger: CAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGTAGCTATTCCACAGAACCTGCAGGCCGCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp TCCTGTGTCGCCTTTACCACTGCATCCAGGTCCTTCTaGCTGTACTGGAGCAGGTCCACTATAGGTCCGGTG +
Preference number: 6 (lower is better)
Translates to: SCVAFTTASRSF*LYWSRSTIGPV
Trigger: CACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAAGGCGACACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313288.9
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS CCA 72 bp TCCAAACTGCTCCAGGTAATCCACTGGCTCACTGCCTaGACAGCTTGTGGGAAGCGAGGTGCTGGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: SKLLQVIHWLTA*TACGKRGAGRV
Trigger: AACTCTGCCAGCACCTCGCTTCCCACAAGCTGTCCAGGCAGTGAGCCAGTGGATTACCTGGAGCAGTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470136.2
CDS CCA 72 bp ACTACCTGCGTCCTTACCACTGCATCCAGGTCCTTCTaGCTGTACTGGAGCAGGTCCACTATAGGTCCGGTG +
Preference number: 6 (lower is better)
Translates to: TTCVLTTASRSF*LYWSRSTIGPV
Trigger: CACCGGACCTATAGTGGACCTGCTCCAGTACAGCCAGAAGGACCTGGATGCAGTGGTAAGGACGCAGGTAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS CCA 72 bp TCGCAGATCCTGGTCAGCTCCTCGTTCTCTTTAGTCTaGAGGAGGAAGATGAGTTGCGGGGCTTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: SQILVSSSFSLV*RRKMSCGASPC
Trigger: GCAGGGAGAAGCCCCGCAACTCATCTTCCTCCTCCAGACTAAAGAGAACGAGGAGCTGACCAGGATCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484264.1
CDS TCA 72 bp CCCGCAGAGGTGTCTGAAAAGTCACCTGTTGCGGAGTaGGGAGGAGAGCACCTTCATAGCTTTGGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PAEVSEKSPVAE*GGEHLHSFGQV
Trigger: AACCTGGCCAAAGCTATGAAGGTGCTCTCCTCCTCACTCCGCAACAGGTGACTTTTCAGACACCTCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS TCA 72 bp AGAATCCTGTGCGTCTGTGGATCCCGCAGAGGTGTCTaGAAAGTCACCTGTTGCGGAGTGAGGAGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: RILCVCGSRRGV*KVTCCGVRRRA
Trigger: TGCTCTCCTCCTCACTCCGCAACAGGTGACTTTTCAGACACCTCTGCGGGATCCACAGACGCACAGGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS TCA 72 bp TGGTTGGGAGGCGGGTACAGTAGGAACCTTCCCCTCTaGTTTCTGGTTAGGGACTCTGGGGTCTTGAGAACC +
Preference number: 6 (lower is better)
Translates to: WLGGGYSRNLPL*FLVRDSGVLRT
Trigger: GGTTCTCAAGACCCCAGAGTCCCTAACCAGAAATCAGAGGGGAAGGTTCCTACTGTACCCGCCTCCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS GCA 72 bp TCCCTCAGGAGGGGGTCGAACTTGAGGTATAAGGACTaGTTCCTCAAGGCCGACTCCGAGGAAGTTCCAAAC +
Preference number: 6 (lower is better)
Translates to: SLRRGSNLRYKD*FLKADSEEVPN
Trigger: GTTTGGAACTTCCTCGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652770.1
CDS CCA 72 bp AAGCAAACGTTCAGGATGAGGAGGCAACCGAAACGATaGGTGCCAGAGACAGCCCAAGGAATGAGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: KQTFRMRRQPKR*VPETAQGMRQG
Trigger: CCCTTGCCTCATTCCTTGGGCTGTCTCTGGCACCCATCGTTTCGGTTGCCTCCTCATCCTGAACGTTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CAA 72 bp GTAGCTCACAGTGGTGCCTGCAGACACCCAGCCCCTTaGTGTGCCTACAGCTCTCTTAGGGACAATTTAGGC +
Preference number: 6 (lower is better)
Translates to: VAHSGACRHPAP*CAYSSLRDNLG
Trigger: GCCTAAATTGTCCCTAAGAGAGCTGTAGGCACACAAAGGGGCTGGGTGTCTGCAGGCACCACTGTGAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484651.5
CDS TCA 72 bp CCATGGCCTGGTACACAACCTCTTCGAACCTGTCCATaGTCTTCCTGTGGGAGGAGAACAGACACACAGCCA +
Preference number: 6 (lower is better)
Translates to: PWPGTQPLRTCP*SSCGRRTDTQP
Trigger: TGGCTGTGTGTCTGTTCTCCTCCCACAGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTACCAGGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp CAAATTCTAGTTTTACAGGTCCGCTCCTCGAGGAGCTaGCCATTTGGCCTGCAGCCACTTCTTCCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: QILVLQVRSSRS*PFGLQPLLPED
Trigger: GTCCTCAGGAAGAAGTGGCTGCAGGCCAAATGGCCAGCTCCTCGAGGAGCGGACCTGTAAAACTAGAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313288.9
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1
CDS TCA 72 bp CACTGCAACCAGACTTGGTGTCACCTCCGAACGGGATaGAGTTTGGGTCATCCATTTTGTCCCAGTCGAGGT +
Preference number: 6 (lower is better)
Translates to: HCNQTWCHLRTG*SLGHPFCPSRG
Trigger: ACCTCGACTGGGACAAAATGGATGACCCAAACTTCATCCCGTTCGGAGGTGACACCAAGTCTGGTTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS GCA 72 bp TCCCTCAGGAGGGGGTCGAACTTGAGGTATAAGGACTaGTTCCTCAAGGCCGACTCCTTAAACGAGGAAGTT +
Preference number: 6 (lower is better)
Translates to: SLRRGSNLRYKD*FLKADSLNEEV
Trigger: AACTTCCTCGTTTAAGGAGTCGGCCTTGAGGAAGCAGTCCTTATACCTCAAGTTCGACCCCCTCCTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000466077.1
ENST00000470136.2
ENST00000484651.5
ENST00000612220.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
CDS CCA 72 bp TACACAACCTCTTCGAACCTGTCCATGATCTTCCTGTaGGAGGAGAACAGACACACAGCCATTGCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: YTTSSNLSMIFL*EENRHTAIASG
Trigger: ACCCGAGGCAATGGCTGTGTGTCTGTTCTCCTCCCACAGGAAGATCATGGACAGGTTCGAAGAGGTTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS CCA 72 bp TTCCCCATTCTGCTTCTTGACCCACAGGATGGTTCTTaGGGAAACAGTACACGTAATCCTGCTGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: FPILLLDPQDGS*GNSTRNPAEPG
Trigger: CCCTGGCTCAGCAGGATTACGTGTACTGTTTCCCCAAGAACCATCCTGTGGGTCAAGAAGCAGAATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CAA 72 bp CCTGTGGGTATTGGAGAAGCCACCTTAGAGGTGGAATaGCGTGCGTGGCGTGCTTTGTTCAGAATAAGGAGG +
Preference number: 6 (lower is better)
Translates to: PVGIGEATLEVE*RAWRALFRIRR
Trigger: CCTCCTTATTCTGAACAAAGCACGCCACGCACGCAATTCCACCTCTAAGGTGGCTTCTCCAATACCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS TCA 72 bp ATGCAGCTGCTTCTCTTTCTGTGTCCAGACCGGGTGTaGGTTTTCCAGTCCAAGGGTGTCATCCTGAGTGAA +
Preference number: 6 (lower is better)
Translates to: MQLLLFLCPDRV*VFQSKGVILSE
Trigger: TTCACTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGTCTGGACACAGAAAGAGAAGCAGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612220.5
CDS CCA 72 bp ACCAGACTTGGTGTCACCTCCGAACGGGATGAAGTTTaGGTCATCCATTTTGTCCCAGTCGAGGTGGTAAGA +
Preference number: 6 (lower is better)
Translates to: TRLGVTSERDEV*VIHFVPVEVVR
Trigger: TCTTACCACCTCGACTGGGACAAAATGGATGACCCAAACTTCATCCCGTTCGGAGGTGACACCAAGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313288.9
ENST00000470136.2
ENST00000484651.5
ENST00000650779.1
ENST00000651251.1
ENST00000651472.1
ENST00000651817.1
ENST00000652770.1
CDS CAA 72 bp AAGCATAAGATACCTTCTTCCCTAGAGTATTCAGGCTaGCTTCTGTTAGGCAGCTGGGCCCCAGCCACTGAC +
Preference number: 6 (lower is better)
Translates to: KHKIPSSLEYSG*LLLGSWAPATD
Trigger: GTCAGTGGCTGGGGCCCAGCTGCCTAACAGAAGCAAGCCTGAATACTCTAGGGAAGAAGGTATCTTATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404054.3
CDS TCA 72 bp TGCTTCCTGGGACCAAGAGCTAAAGGGCCTTCAGGCTaGGATGGTGAGAAAGAAAACCCAAGCCTGCATAAT +
Preference number: 6 (lower is better)
Translates to: CFLGPRAKGPSG*DGEKENPSLHN
Trigger: ATTATGCAGGCTTGGGTTTTCTTTCTCACCATCTCAGCCTGAAGGCCCTTTAGCTCTTGGTCCCAGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651251.1
CDS CAA 72 bp GAGGAGGAGAGCACCTTCATAGCTTTGGCCAGGTTCTaGGGTGGCACATTTTCTTTCTGTGACACACGAAGA +
Preference number: 6 (lower is better)
Translates to: EEESTFIALARF*GGTFSFCDTRR
Trigger: TCTTCGTGTGTCACAGAAAGAAAATGTGCCACCCAAGAACCTGGCCAAAGCTATGAAGGTGCTCTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467746.6
CDS GCA 72 bp GGGTATTGGAGAAGCCACCTTAGAGGTGGAATTGCGTaGGTGGCGTGCTTTGTTCAGAATAAGGAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: GYWRSHLRGGIA*VACFVQNKEEK
Trigger: TTTTTCCTCCTTATTCTGAACAAAGCACGCCACGCACGCAATTCCACCTCTAAGGTGGCTTCTCCAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS CCA 72 bp AACTTTTGTCATAGTTGGAGAATGGCCTGTGGGTATTaGAGAAGCCACCTTAGAGGTGGAATTGCGTGCGTG +
Preference number: 6 (lower is better)
Translates to: NFCHSWRMACGY*RSHLRGGIACV
Trigger: CACGCACGCAATTCCACCTCTAAGGTGGCTTCTCCAATACCCACAGGCCATTCTCCAACTATGACAAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652002.1
CDS GCA 72 bp GTGGGACCGGAAAGACTCAGTGTAGTTGTCAACTGTTaGGACCTAAAAGGTTACTCCAAAACTTTAAGCGGC +
Preference number: 6 (lower is better)
Translates to: VGPERLSVVVNC*DLKGYSKTLSG
Trigger: GCCGCTTAAAGTTTTGGAGTAACCTTTTAGGTCGCAACAGTTGACAACTACACTGAGTCTTTCCGGTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS CAA 72 bp AGTGGGACCGGAAAGACTCAGTGTAGTTGTCAACTGTaGCGACCTAAAAGGTTACTCCAAAACTTTAAGCGG +
Preference number: 6 (lower is better)
Translates to: SGTGKTQCSCQL*RPKRLLQNFKR
Trigger: CCGCTTAAAGTTTTGGAGTAACCTTTTAGGTCGCAACAGTTGACAACTACACTGAGTCTTTCCGGTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458173.4
ENST00000652002.1
CDS CCA 72 bp CACACGAAGAACAGACGATCTTCCGGTAACTTCTGGTaGCGAAAACAGGAAGTCGCAATTTTCTGTATTTTT +
Preference number: 6 (lower is better)
Translates to: HTKNRRSSGNFW*RKQEVAIFCIF
Trigger: AAAAATACAGAAAATTGCGACTTCCTGTTTTCGCCACCAGAAGTTACCGGAAGATCGTCTGTTCTTCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000313288.9
ENST00000458173.4
ENST00000467746.6
ENST00000484651.5
ENST00000493975.5
ENST00000612220.5
ENST00000651251.1
ENST00000651472.1
ENST00000652770.1