RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TACC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000147526

Ensembl transcript IDs: ENST00000276520.12, ENST00000317827.9, ENST00000518415.5, ENST00000518809.5, ENST00000519093.5, ENST00000519416.5, ENST00000520340.5, ENST00000520611.1, ENST00000520615.5, ENST00000520973.5, ENST00000521050.5, ENST00000521154.1, ENST00000521528.6, ENST00000521568.1, ENST00000521642.5, ENST00000521866.5, ENST00000521935.5, ENST00000522474.1, ENST00000522544.5, ENST00000522548.1, ENST00000522752.5, ENST00000522904.5, ENST00000522955.5, ENST00000522983.1, ENST00000523834.1, ENST00000524193.1, ENST00000524354.5

Found 985 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTTCCAGGGCTGTTGCATTGGCAGCAA +
Preference number: 1 (lower is better)
Translates to: TRRLQHCQVTLLSRL*NPLGFLPGLLHWQQ
Trigger: TTGCTGCCAATGCAACAGCCCTGGAAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR GCA 90 bp TGGCTGAGAGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAG +
Preference number: 1 (lower is better)
Translates to: WLRGQDNYHLTKVLW*SLCISFIHWGQVLK
Trigger: CTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCTCTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR CCA 90 bp TCATGGCTGAGAGGCCAGGACAATTATCACTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTT +
Preference number: 1 (lower is better)
Translates to: SWLRGQDNYHLTKVL*CSLCISFIHWGQVL
Trigger: AAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCTCTCAGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR CCA 90 bp TGGGCTTCCCGGTATTTCCAGAGCAGTTTTACAGAACAAAAGGTTTaGGTAGGTCACTGGCTGGAAGGAGACTCTCCAACCTTGACTGTG +
Preference number: 1 (lower is better)
Translates to: WASRYFQSSFTEQKV*VGHWLEGDSPTLTV
Trigger: CACAGTCAAGGTTGGAGAGTCTCCTTCCAGCCAGTGACCTACCCAAACCTTTTGTTCTGTAAAACTGCTCTGGAAATACCGGGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 90 bp CTGAGGCTCTGGTGTGGTCACCTACACGCTGCCCTGTATCTGGACTaGGGATGGTTTGAGTTCAAATTTGTACATGTCCATCTGAAAATT +
Preference number: 1 (lower is better)
Translates to: LRLWCGHLHAALYLD*GWFEFKFVHVHLKI
Trigger: AATTTTCAGATGGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCACACCAGAGCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 90 bp TATTTCCAGAGCAGTTTTACAGAACAAAAGGTTTGGGTAGGTCACTaGCTGGAAGGAGACTCTCCAACCTTGACTGTGACTATCTGGGCA +
Preference number: 1 (lower is better)
Translates to: YFQSSFTEQKVWVGH*LEGDSPTLTVTIWA
Trigger: TGCCCAGATAGTCACAGTCAAGGTTGGAGAGTCTCCTTCCAGCCAGTGACCTACCCAAACCTTTTGTTCTGTAAAACTGCTCTGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR TCA 90 bp AAGGAAATCAGTTATACCAAGGGGAGACACGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCATATTACACCACAGTGACTGCTTTC +
Preference number: 1 (lower is better)
Translates to: KEISYTKGRHVPLVL*PLGQHSYYTTVTAF
Trigger: GAAAGCAGTCACTGTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTCCCCTTGGTATAACTGATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR CCA 90 bp CTCTGGTGTGGTCACCTACACGCTGCCCTGTATCTGGACTGGGGATaGTTTGAGTTCAAATTTGTACATGTCCATCTGAAAATTCTTTAT +
Preference number: 1 (lower is better)
Translates to: LWCGHLHAALYLDWG*FEFKFVHVHLKILY
Trigger: ATAAAGAATTTTCAGATGGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCACACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR GCA 90 bp ACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAAGGCTaGCAAATCCTAGGTTTTTCACCATCATGTGCTTCTGCACTTCCT +
Preference number: 1 (lower is better)
Translates to: TKHKSSLRFHTILEG*QILGFSPSCASALP
Trigger: AGGAAGTGCAGAAGCACATGATGGTGAAAAACCTAGGATTTGGCAGCCTTCCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR TCA 90 bp ATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGATATaGAAACCCAAGACTGTGGTCTTCACATCTTTAATCCCCCAAATT +
Preference number: 1 (lower is better)
Translates to: IPGQQNVMANSLLQI*KPKTVVFTSLIPQI
Trigger: AATTTGGGGGATTAAAGATGTGAAGACCACAGTCTTGGGTTTTCATATCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 90 bp GTGGTCTTCACATCTTTAATCCCCCAAATTCTTAAGTTGGTGTTCTaGGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAGGAAA +
Preference number: 1 (lower is better)
Translates to: VVFTSLIPQILKLVF*VRTLFQNRVSHPRK
Trigger: TTTCCTTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAAGAATTTGGGGGATTAAAGATGTGAAGACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 90 bp ATTTATATGGAAAAATTCCATGTTGGGGTTAATGGCCCACCACTCTaGACTGAGTCCAGTAAGAGCTTGAGGAATTTGGCTTTGTTAGTA +
Preference number: 1 (lower is better)
Translates to: IYMEKFHVGVNGPPL*TESSKSLRNLALLV
Trigger: TACTAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTCAGTTCAGAGTGGTGGGCCATTAACCCCAACATGGAATTTTTCCATATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 90 bp GTTTATTACTGCCTAGCTAGCAGGTTATTTGGCCCTCACATGTGTTaGGGCAAACTCTATACTATATTCTTACTCTCCAGAGTTCCAAAA +
Preference number: 1 (lower is better)
Translates to: VYYCLASRLFGPHMC*GKLYTIFLLSRVPK
Trigger: TTTTGGAACTCTGGAGAGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTGCTAGCTAGGCAGTAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 90 bp TTTGAGTATATGTCAGATACCACTAAAAGGCAGAGGGGGAGAAAGTaGCATCTTGACAGTTCTAAATTAAAGGATCGATACAGGGAAGGT +
Preference number: 1 (lower is better)
Translates to: FEYMSDTTKRQRGRK*HLDSSKLKDRYREG
Trigger: ACCTTCCCTGTATCGATCCTTTAATTTAGAACTGTCAAGATGTCACTTTCTCCCCCTCTGCCTTTTAGTGGTATCTGACATATACTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR CAA 90 bp CTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGGACAGGCAGCAGTAGGCATGTGCTT +
Preference number: 2 (lower is better)
Translates to: LLSRLCNPLGFLPGL*HWQQSGTGSSRHVL
Trigger: AAGCACATGCCTACTGCTGCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 2 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CAA 90 bp GTCATGGCTGAGAGGCCAGGACAATTATCACTTAACGAAGGTCCTTaGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: VMAERPGQLSLNEGP*VLPVHQLHSLGSGS
Trigger: AGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCTCTCAGCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAGTGCTTCACTCCAGCTaGTTTTACCCAGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPVLHSS*FYPAQE
Trigger: TTCCTGGGCTGGGTAAAAGCAGCTGGAGTGAAGCAC...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CAA 90 bp CTGGGCTTCCCGGTATTTCCAGAGCAGTTTTACAGAACAAAAGGTTaGGGTAGGTCACTGGCTGGAAGGAGACTCTCCAACCTTGACTGT +
Preference number: 2 (lower is better)
Translates to: LGFPVFPEQFYRTKG*GRSLAGRRLSNLDC
Trigger: ACAGTCAAGGTTGGAGAGTCTCCTTCCAGCCAGTGACCTACCCAAACCTTTTGTTCTGTAAAACTGCTCTGGAAATACCGGGAAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAAGCTTGAGTAACCACTaGGCTGCCCTTTGTTACCTT +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPSLSNH*AALCYL
Trigger: AAGGTAACAAAGGGCAGCTCAGTGGTTACTCAAGCT...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 2 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 2 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: SLERRHLLSSNGGYFLITQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQLRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 2 (lower is better)
Translates to: SLERRHLLSSNGGYFLITVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAATCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: VFHHHVLLHFLIWAESEESPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAAGGGGAATTGTTCAGTTaGCCTCACGTTGCATTCCCC +
Preference number: 2 (lower is better)
Translates to: VFHHHVLLHFLIWAESEEGELFS*PHVAFP
Trigger: GGGGAATGCAACGTGAGGCCAACTGAACAATTCCCC...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CAA 90 bp CCCTGGAGAATGCTGCCGCTGATAGTCTCTTCCAGAGGAGATCCTTaGAGAGGAGAGTCTGTTACATCAGTTTCTTTACTGTTACTCTAT +
Preference number: 2 (lower is better)
Translates to: PWRMLPLIVSSRGDP*RGESVTSVSLLLLY
Trigger: ATAGAGTAACAGTAAAGAAACTGATGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGGAAGAGACTATCAGCGGCAGCATTCTCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR TCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACATATTACACCACAGTaGCTGCTTTCAAAGCTCAAA +
Preference number: 2 (lower is better)
Translates to: SALSLASSIQVKALHRPPHITPQ*LLSKLK
Trigger: TTTGAGCTTTGAAAGCAGTCACTGTGGTGTAATATG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGCATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 2 (lower is better)
Translates to: KITGIWRPVKPFWTDISSHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 2 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR-3UTR GCA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 2 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp TCAGTTGGCCTCACGTTGCATTCCCCACTTAAAATACTGCTGGATAAAGGCTATATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGG +
Preference number: 2 (lower is better)
Translates to: SVGLTLHSPLKILLDKGYISFIH*GQVLKG
Trigger: CCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGAT...ATAGCCTTTATCCAGCAGTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAAGAGCAGTTCTTACTTaGCTATGCTTCAGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRRAVLT*LCFREK
Trigger: CTTTTCCCTGAAGCATAGTCAAGTAAGAACTGCTCT...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: SLERRHLLSSNGGYFLITTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 2 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 2 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGACCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR TCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAAACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: VFHHHVLLHFLIWAESEETLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 2 (lower is better)
Translates to: ETRALGTMTTRTAFILHHICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 2 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 2 (lower is better)
Translates to: LSSNGGYFLITVMAERPGIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: SLERRHLLSSNGGYFLITGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 2 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 2 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 2 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 2 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAATTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: VFHHHVLLHFLIWAESEELEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 2 (lower is better)
Translates to: SLERRHLLSSNGGYFLITICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR TCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 2 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 2 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 2 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCCTGGGGCTAAAGATTaGACCCATGTGAGTAATACA +
Preference number: 2 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTPGAKD*THVSNT
Trigger: TGTATTACTCACATGGGTGCAATCTTTAGCCCCAGG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGCCCCACTTAAAATACTaGTGGATAAAGGCTATCTAC +
Preference number: 2 (lower is better)
Translates to: KITGIWRPVKPFWTDISSPHLKY*WIKAIY
Trigger: GTAGATAGCCTTTATCCAGCAGTATTTTAAGTGGGG...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 2 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGCCCCACTTAAAATACTaGTGGATAAAGGCTATCTAC +
Preference number: 2 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWPHLKY*WIKAIY
Trigger: GTAGATAGCCTTTATCCAGCAGTATTTTAAGTGGGG...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 2 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR GCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGTTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 2 (lower is better)
Translates to: KITGIWRPVKPFWTDISSFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 2 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 2 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR CCA 72 bp TGCAACCCTCTAGGGTTTCTTCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGCAGCAGTAGGCATGTG +
Preference number: 3 (lower is better)
Translates to: CNPLGFLPGLLH*QQSGTGSSRHV
Trigger: CACATGCCTACTGCTGCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAACCCTAGAGGGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR TCA 72 bp GATTTAAAAGAAATGCCTGGATCCTATCCCGACGGCTaGGAAGGACCGAGGCTGAGGCTCTGGTGTGGTCAC +
Preference number: 3 (lower is better)
Translates to: DLKEMPGSYPDG*EGPRLRLWCGH
Trigger: GTGACCACACCAGAGCCTCAGCCTCGGTCCTTCTCAGCCGTCGGGATAGGATCCAGGCATTTCTTTTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 72 bp GTCCTTTGGTGCTCCCTGTGCATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGGTCTCTTCCACCAGTG +
Preference number: 3 (lower is better)
Translates to: VLWCSLCISFIH*GQVLKGSLPPV
Trigger: CACTGGTGGAAGAGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 3 (lower is better)
Translates to: ETRALGTMTTRTAFILHHSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 3 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
3UTR-3UTR CAA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 3 (lower is better)
Translates to: SLERRHLLSSNGGYFLITSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 3 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCTTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACTTAACGAAGGTCCTTaGGTGCTCCCTGTGCATCAG +
Preference number: 3 (lower is better)
Translates to: SALSLASSIQVKALHRPPLNEGP*VLPVHQ
Trigger: CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR GCA 72 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTTCCAGGGCTGTTGCAT +
Preference number: 3 (lower is better)
Translates to: LQHCQVTLLSRL*NPLGFLPGLLH
Trigger: ATGCAACAGCCCTGGAAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
3UTR GCA 72 bp GGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTCATTCACTGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: GQDNYHLTKVLW*SLCISFIHWGQ
Trigger: CTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR CCA 72 bp GGCTCTGGTGTGGTCACCTACACGCTGCCCTGTATCTaGACTGGGGATGGTTTGAGTTCAAATTTGTACATG +
Preference number: 3 (lower is better)
Translates to: GSGVVTYTLPCI*TGDGLSSNLYM
Trigger: CATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCACACCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 3 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 72 bp AGAGGCCAGGACAATTATCACTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGT +
Preference number: 3 (lower is better)
Translates to: RGQDNYHLTKVL*CSLCISFIHWG
Trigger: ACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 3 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR GCA 72 bp GACTTGCCAAACCCTAGCTTGGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAGACACTATCATTAGTC +
Preference number: 3 (lower is better)
Translates to: DLPNPSLEGVPY*RSCRKQTLSLV
Trigger: GACTAATGATAGTGTCTGCTTTCTGCATGAACGGCAATATGGGACTCCCTCCAAGCTAGGGTTTGGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR GCA 72 bp ACTGAGCTGCCCTTTGTTACCTTTATGGAAAATGAGTaGTTCACTCCAGCTGCTTTTACCCAGCCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: TELPFVTFMENE*FTPAAFTQPRN
Trigger: GTTCCTGGGCTGGGTAAAAGCAGCTGGAGTGAAGCACTCATTTTCCATAAAGGTAACAAAGGGCAGCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 72 bp TGGTGTGGTCACCTACACGCTGCCCTGTATCTGGACTaGGGATGGTTTGAGTTCAAATTTGTACATGTCCAT +
Preference number: 3 (lower is better)
Translates to: WCGHLHAALYLD*GWFEFKFVHVH
Trigger: ATGGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 72 bp AGTTTACTGCTACCTCTGAGATTTAAAAGAAATGCCTaGATCCTATCCCGACGGCTGAGAAGGACCGAGGCT +
Preference number: 3 (lower is better)
Translates to: SLLLPLRFKRNA*ILSRRLRRTEA
Trigger: AGCCTCGGTCCTTCTCAGCCGTCGGGATAGGATCCAGGCATTTCTTTTAAATCTCAGAGGTAGCAGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 3 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAATTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 3 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: ETRALGTMTTRTAFILHHESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 72 bp GAAAAATTCCATGTTGGGGTTAATGGCCCACCACTCTaGACTGAGTCCAGTAAGAGCTTGAGGAATTTGGCT +
Preference number: 3 (lower is better)
Translates to: EKFHVGVNGPPL*TESSKSLRNLA
Trigger: AGCCAAATTCCTCAAGCTCTTACTGGACTCAGTTCAGAGTGGTGGGCCATTAACCCCAACATGGAATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR GCA 72 bp CCGGCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTaGCTAGCTAGCAGGTTATTTGGCCCTCACATGTGT +
Preference number: 3 (lower is better)
Translates to: PALFLFCNRVYY*LASRLFGPHMC
Trigger: ACACATGTGAGGGCCAAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 3 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 3 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 3 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 72 bp CCTACACGCTGCCCTGTATCTGGACTGGGGATGGTTTaGGTTCAAATTTGTACATGTCCATCTGAAAATTCT +
Preference number: 3 (lower is better)
Translates to: PTRCPVSGLGMV*VQICTCPSENS
Trigger: AGAATTTTCAGATGGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR GCA 72 bp CAGTTGGCCTCACGTTGCATTCCCCACTTAAAATACTaGTGGATAAAGGCTATCTACACTTTGGCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: QLASRCIPHLKY*WIKAIYTLAKS
Trigger: TGACTTTGCCAAAGTGTAGATAGCCTTTATCCAGCAGTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR CCA 72 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTaGGCTGAGTCTGAAGAAGCTAGAAACCACGTGAGA +
Preference number: 3 (lower is better)
Translates to: VFHHHVLLHFLI*AESEEARNHVR
Trigger: TCTCACGTGGTTTCTAGCTTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGTGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: SLERRHLLSSNGGYFLITCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 3 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 72 bp TGCCTAGCTAGCAGGTTATTTGGCCCTCACATGTGTTaGGGCAAACTCTATACTATATTCTTACTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: CLASRLFGPHMC*GKLYTIFLLSR
Trigger: TCTGGAGAGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTGCTAGCTAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 3 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 3 (lower is better)
Translates to: KITGIWRPVKPFWTDISSNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
3UTR-3UTR CAA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 3 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR-3UTR CAA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 3 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
3UTR TCA 72 bp CAACAAAACGTCATGGCAAATAGTCTTCTCCAGATATaGAAACCCAAGACTGTGGTCTTCACATCTTTAATC +
Preference number: 3 (lower is better)
Translates to: QQNVMANSLLQI*KPKTVVFTSLI
Trigger: GATTAAAGATGTGAAGACCACAGTCTTGGGTTTTCATATCTGGAGAAGACTATTTGCCATGACGTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATGCCGTCGGGGGCCCTaGTGGAGCGCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYACRRGP*WSASSR
Trigger: GCGGGAGGAAGCGCTCCACCAGGGCCCCCGACGGCA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTGCCGTCGGGGGCCCTaGTGGAGCGCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYCRRGP*WSASSR
Trigger: GCGGGAGGAAGCGCTCCACCAGGGCCCCCGACGGCA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCATGTGGTTAAACGAGTaGCGTCGGGGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPMWLNE*RRGPWW
Trigger: CCACCAGGGCCCCCGACGGCACTCGTTTAACCACAT...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCGTCCATTTCGCCCACTaGACGGGGGACAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPVHFAH*TGDRIC
Trigger: GCAGATCCTGTCCCCCGTGCAGTGGGCGAAATGGAC...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTAAGACGCCCGTCCTGTaGCCTCCTCAGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFKTPVL*PPQAPG
Trigger: GCCGGGGGCCTGAGGAGGCCACAGGACGGGCGTCTT...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCATGATCATGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPMIMAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATCAT...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTAATGGAGGGAACCGGTaGCAGGCGCCAGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFNGGNR*QAPASV
Trigger: AACGCTTGCTGGCGCCTGTCACCGGTTCCCTCCATT...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATCCTATCCCGACGGCTaGGAAGGACCGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPSYPDG*EGPRLR
Trigger: CCTCAGCCTCGGTCCTTCTCAGCCGTCGGGATAGGA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCCCCCAGCTCAACCCCTaGGTCGTTGGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCPQLNP*VVGVTT
Trigger: AGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGG...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATCTCAAGCTTGAGAGGTaGGCTCCTCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYLKLER*APRLLP
Trigger: GGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAG...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCTCAAGCTTGAGAGGTaGGCTCCTCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLKLER*APRLLP
Trigger: GGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCGCAATCACGCGGATaGCAGCCCGGCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLPQSRG*QPGRDH
Trigger: GTGGTCTCTGCCGGGCTGTCATCCGCGTGATTGCGG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520973.5
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCGTGCTTCACTCCAGCTaGTTTTACCCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPVLHSS*FYPAQE
Trigger: TTCCTGGGCTGGGTAAAAGCAGCTGGAGTGAAGCAC...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACCGCGGCTGCGTTTTaGGTACACGGTAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTAAAF*VHGRAP
Trigger: CGGGGCCCTACCGTGTACCCAAAACGCAGCCGCGGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520973.5
3UTR CAA 72 bp AGACTATGCAACCCTCTAGGGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGGACAGGCAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLCNPLGFLPGL*HWQQSGTGSSR
Trigger: CCTACTGCTGCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAACCCTAGAGGGTTGCATAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATCCTATCCCGACGGCTaGGAAGGACCGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGSYPDG*EGPRLR
Trigger: CCTCAGCCTCGGTCCTTCTCAGCCGTCGGGATAGGA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCCCCAGCTCAACCCCTaGGTCGTTGGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVPQLNP*VVGVTT
Trigger: AGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAGGGGCGCCTCCTACGTaGTCCCAACGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELGAPPT*SQRWPC
Trigger: ACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCC...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGGGGCGCCTCCTACGTaGTCCCAACGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITGAPPT*SQRWPC
Trigger: ACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGAAGACGCCCGTCCTGTaGCCTCCTCAGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGKTPVL*PPQAPG
Trigger: GCCGGGGGCCTGAGGAGGCCACAGGACGGGCGTCTT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGGGCAGGGGAATGGGTaGGGAGAGCCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFGQGNG*GEPFSL
Trigger: AAGGGAAAAAGGCTCTCCCCACCCATTCCCCTGCCC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAATTTCGCATCTCTCCTaGGGAAGCCACGGGGCGATC +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAISHLS*GSHGAI
Trigger: GATCGCCCCGTGGCTTCCCCAGGAGAGATGCGAAAT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGACCAGGACCTCTCTCTaGCCTTGGAACCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVTRTSL*PWNPWD
Trigger: GTCCCAAGGGTTCCAAGGCCAGAGAGAGGTCCTGGT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR TCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGGACTCCTTGAAAGGTaGTCGGATCGGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYGLLER*SDRGFS
Trigger: GCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCC...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVDHRTP*KVIGSG
Trigger: CCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTCCTGCCAATCCGAGTaGTGGATCACAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCSCQSE*WITGLL
Trigger: AAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTCAAGCTTGAGAGGTaGGCTCCTCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLKLER*APRLLP
Trigger: GGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCCAAGGGGAGACACGTaGCCTTGGTACTATGACCAC +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFPRGDT*PWYYDH
Trigger: GTGGTCATAGTACCAAGGGCACGTGTCTCCCCTTGG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSTKVLW*SLCISF
Trigger: GAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGT...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGGCTGGAGCTCAAGTaGGAAGTCAGCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGLELK*EVSWVS
Trigger: GGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTACGCTGCCCTGTATCTaGACTGGGGATGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSTLPCI*TGDGLS
Trigger: ACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACCGAGGCTGAGGCTCTaGTGTGGTCACCTACACGCT +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGPRLRL*CGHLHA
Trigger: AGCGTGTAGGTGACCACACCAGAGCCTCAGCCTCGG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAAGTGCGAAGTCAGCTaGGTCTCCGGCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQKCEVS*VSGSFP
Trigger: CGGAAAGGAGCCGGAGACCCAGCTGACTTCGCACTT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTGGACTCCTTGAAAGGTaGTCGGATCGGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFGLLER*SDRGFS
Trigger: GCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCC...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATCCTGCCAATCCGAGTaGTGGATCACAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYASCQSE*WITGLL
Trigger: AAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCCTGCCAATCCGAGTaGTGGATCACAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSCQSE*WITGLL
Trigger: AAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATAGCAGCGTTGGTGTCTaGGAACTCTCCTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYSSVGV*ELSSNC
Trigger: GCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGACGGGGGACAGGATCTaGCACGGGCTGAACGCCATG +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGTGDRI*HGLNAM
Trigger: CATGGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGT...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCACCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACTCTAGGGCAGACTTaGCAAACCCTAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYATLGQT*QTLAWR
Trigger: CCTCCAAGCTAGGGTTTGGCAAGTCTGCCCTAGAGT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYTKVLW*SLCISF
Trigger: GAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYATKVLW*SLCISF
Trigger: GAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYSPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATGGTCACCTACACGCTaGCCTGTATCTGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGWSPTR*PVSGLG
Trigger: CCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGTTTGGGTAGGTCACTaGCTGGAAGGAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFVWVGH*LEGDSP
Trigger: TGGAGAGTCTCCTTCCAGCCAGTGACCTACCCAAAC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGTTTGGGTAGGTCACTaGCTGGAAGGAGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAVWVGH*LEGDSP
Trigger: TGGAGAGTCTCCTTCCAGCCAGTGACCTACCCAAAC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCCGAGGCTGAGGCTCTaGTGTGGTCACCTACACGCT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNPRLRL*CGHLHA
Trigger: AGCGTGTAGGTGACCACACCAGAGCCTCAGCCTCGG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCTTTAAAAGAAATGCCTaGATCCTATCCCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPFKRNA*ILSRRL
Trigger: CAGCCGTCGGGATAGGATCCAGGCATTTCTTTTAAA...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACTTCATGGCACCCGTaGGAACACAGTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYATSWHP*EHSGSR
Trigger: TCTGCTTCCACTGTGTTCCCACGGGTGCCATGAAGT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGTGATTCTTGGCTTTTaGCCCCAGGTCCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVVILGF*PQVLPI
Trigger: GATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAGGAAGGGGAGGGCATaGTCTCCCAACCAAGCACTT +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQRKGRA*SPNQAL
Trigger: AAGTGCTTGGTTGGGAGACCATGCCCTCCCCTTCCT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAAATGGAGGGAACCGGTaGCAGGCGCCAGCAAGCGTT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELNGGNR*QAPASV
Trigger: AACGCTTGCTGGCGCCTGTCACCGGTTCCCTCCATT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCTTCTCTTATTAAGGTaGGCACGGCTGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSLLLLR*ARLSCL
Trigger: CAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGDHRTP*KVIGSG
Trigger: CCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLDHRTP*KVIGSG
Trigger: CCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATC...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTCAAGCTTGAGAGGTaGGCTCCTCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLKLER*APRLLP
Trigger: GGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGATGTGGTTAAACGAGTaGCGTCGGGGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGMWLNE*RRGPWW
Trigger: CCACCAGGGCCCCCGACGGCACTCGTTTAACCACAT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCACGGGGGACAGGATCTaGCACGGGCTGAACGCCATG +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSTGDRI*HGLNAM
Trigger: CATGGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAGATTTGGTCTCGGCTTaGGAATCCTCCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRDLVSA*ESSSSG
Trigger: CCCCGAGGAGGAGGATTCGCAAGCCGAGACCAAATC...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGCCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACATGATCATGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHMIMAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATCAT...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCTTGGGAGTCAGTGTaGTACCCAGTTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSWESV*YPVSCQ
Trigger: TTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTCTTGGGAGTCAGTGTaGTACCCAGTTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYSWESV*YPVSCQ
Trigger: TTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACCTCACTCCCCAGAATaGATAGCCTACATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGPHSPE*IAYMQP
Trigger: GGGCTGCATGTAGGCTATGCATTCTGGGGAGTGAGG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTTTCCCTTTCAAAATaGAGGGAACCGGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCFSLSK*REPVTG
Trigger: GCCTGTCACCGGTTCCCTCCATTTTGAAAGGGAAAA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGCTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATCCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCACCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACAGCCCAGGAACATCTaGGGGCAGTTTACACTCCCT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGQPRNI*GQFTLP
Trigger: AGGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATCTGAGTGAGAGTCAATaGCCTGCTGTGGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYLSESQ*PAVALH
Trigger: ATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAG...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAAACGCTGGCCCTGTCTaGAATTTAAAGCTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYANAGPV*NLKLRL
Trigger: CAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAAATGTCCACGGGGCTaGAGCTCAAGTGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQKCPRG*SSSAKS
Trigger: TGACTTCGCACTTGAGCTCCAGCCCCGTGGACATTT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACAGGAAGGGGAGGGCATaGTCTCCCAACCAAGCACTT +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHRKGRA*SPNQAL
Trigger: AAGTGCTTGGTTGGGAGACCATGCCCTCCCCTTCCT...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTGGCCTTGGAACCCTTaGGACTCTTCGGCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGWPWNP*DSSARV
Trigger: GACCCTCGCCGAAGAGTCCCAAGGGTTCCAAGGCCA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACCTCTCTCTGGCCTTaGAACCCTTGGGACTCTTCG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTSLWP*NPWDSS
Trigger: CGAAGAGTCCCAAGGGTTCCAAGGCCAGAGAGAGGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATGCGAGCTCTGTTTCTaGGGAGGCAGCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGCELCF*GGSSTL
Trigger: CAGAGTAGAGCTGCCTCCCCAGAAACAGAGCTCGCA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR TCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLDHRTP*KVIGSG
Trigger: CCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATC...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTTCATCAGCTTCTTGTaGTTCTTGGCTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVFISFL*FLAFGP
Trigger: GGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGCCCCAGCTCAACCCCTaGGTCGTTGGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGPQLNP*VVGVTT
Trigger: AGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGG...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGCCACCTGCTACCGCTaGTTTCGCATCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKATCYR*FRISPG
Trigger: CCCAGGAGAGATGCGAAATCAGCGGTAGCAGGTGGC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTACTCTAGGGCAGACTTaGCAAACCCTAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLTLGQT*QTLAWR
Trigger: CCTCCAAGCTAGGGTTTGGCAAGTCTGCCCTAGAGT...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACTCTAGGGCAGACTTaGCAAACCCTAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTLGQT*QTLAWR
Trigger: CCTCCAAGCTAGGGTTTGGCAAGTCTGCCCTAGAGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGCCAAGGGGAGACACGTaGCCTTGGTACTATGACCAC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLPRGDT*PWYYDH
Trigger: GTGGTCATAGTACCAAGGGCACGTGTCTCCCCTTGG...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGSPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACGTCTCCTTCTCTATaGCTTTCACCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTSPSL*LSPRHQ
Trigger: CTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518415.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCCAGGGCTGTTGCATTaGCAGCAAAGCGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICPGLLH*QQSGTG
Trigger: GCCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFISFIH*GQVLKG
Trigger: CCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGAT...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGGCCTTCCACAGTGTTaGGATTACAGGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFGLPQC*DYRNKP
Trigger: TGGCTTATTCCTGTAATCCCAACACTGTGGAAGGCC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAGGGGAATTGTTCAGTTaGCCTCACGTTGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGGELFS*PHVAFP
Trigger: GGGGAATGCAACGTGAGGCCAACTGAACAATTCCCC...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGGGAATTGTTCAGTTaGCCTCACGTTGCATTCCCC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGELFS*PHVAFP
Trigger: GGGGAATGCAACGTGAGGCCAACTGAACAATTCCCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCACAGAACAAAAGGTTTaGGTAGGTCACTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCTEQKV*VGHWLE
Trigger: TTCCAGCCAGTGACCTACCCAAACCTTTTGTTCTGT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTGGAAGGGCTTTCCTaGCCTCTATGTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCLEGLS*PLCFLY
Trigger: ATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGCTCCGTCTGAATTCTaGTGCCTTTTCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFAPSEF*CLFTSY
Trigger: GTAAGAGGTGAAAAGGCACCAGAATTCAGACGGAGC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCLRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACCATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGGCCCTCACATGTGTTaGGGCAAACTCTATACTATA +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFGPHMC*GKLYTI
Trigger: TATAGTATAGAGTTTGCCTCAACACATGTGAGGGCC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAGGACTCCTTGAAAGGTaGTCGGATCGGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELGLLER*SDRGFS
Trigger: GCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCC...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGGACTCCTTGAAAGGTaGTCGGATCGGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITGLLER*SDRGFS
Trigger: GCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACAGCAGCGTTGGTGTCTaGGAACTCTCCTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNSSVGV*ELSSNC
Trigger: GCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCCCCAGCTCAACCCCTaGGTCGTTGGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKPQLNP*VVGVTT
Trigger: AGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACCCCAGCTCAACCCCTaGGTCGTTGGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQPQLNP*VVGVTT
Trigger: AGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCGTCAGCTTCGTTCCTaGCATGCTGGAAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFRQLRS*HAGKSF
Trigger: GAAACTTTTTCCAGCATGTCAGGAACGAAGCTGACG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGAGGGAGTCCCATATTaGCGTTCATGCAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGEGVPY*RSCRKQ
Trigger: CTGCTTTCTGCATGAACGGCAATATGGGACTCCCTC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATCCTGGGGCTAAAGATTaGACCCATGTGAGTAATACA +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYPGAKD*THVSNT
Trigger: TGTATTACTCACATGGGTGCAATCTTTAGCCCCAGG...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGCCAAGGGGAGACACGTaGCCTTGGTACTATGACCAC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGPRGDT*PWYYDH
Trigger: GTGGTCATAGTACCAAGGGCACGTGTCTCCCCTTGG...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGATGATCATGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITMIMAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATCAT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAGTGCTTCACTCCAGCTaGTTTTACCCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRVLHSS*FYPAQE
Trigger: TTCCTGGGCTGGGTAAAAGCAGCTGGAGTGAAGCAC...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATCTTGGGAGTCAGTGTaGTACCCAGTTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGSWESV*YPVSCQ
Trigger: TTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTTGCTGGGCCTGAACTaGGAGCTCTGTTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGLLGLN*ELCFWG
Trigger: TCCCCAGAAACAGAGCTCGCAGTTCAGGCCCAGCAA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCCATTTCCCAGCAGCTaGCAGGGGCCTGTCATCACG +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHPFPSS*QGPVIT
Trigger: CGTGATGACAGGCCCCTGGCAGCTGCTGGGAAATGG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520973.5
CDS-3UTR CCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAGCAGAGGCGCGGATGTaGTTAAACGAGTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVAEARM*LNECRR
Trigger: CCGACGGCACTCGTTTAACCACATCCGCGCCTCTGC...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCGGGCAGGGGAATGGGTaGGGAGAGCCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSGQGNG*GEPFSL
Trigger: AAGGGAAAAAGGCTCTCCCCACCCATTCCCCTGCCC...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCCCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQISFIH*GQVLKG
Trigger: CCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGAT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCTCTGTTAAGTTCGAATaGGGGATATTTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPSVKFE*GIFPHN
Trigger: GTTATGAGGAAATATCCCCCATTCGAACTTAACAGA...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTGGCCTTCCACAGTGTTaGGATTACAGGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFGLPQC*DYRNKP
Trigger: TGGCTTATTCCTGTAATCCCAACACTGTGGAAGGCC...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAGCCCTGTATCTGGACTaGGGATGGTTTGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPALYLD*GWFEFK
Trigger: TTTGAACTCAAACCATCCCCAGTCCAGATACAGGGC...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATTTAAAAGAAATGCCTaGATCCTATCCCGACGGCTG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAFKRNA*ILSRRL
Trigger: CAGCCGTCGGGATAGGATCCAGGCATTTCTTTTAAA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCTGAGTGAGAGTCAATaGCCTGCTGTGGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLLSESQ*PAVALH
Trigger: ATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTGCCGAGATATCCGTaGAATCCTTCGTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFLPRYP*NPSFLL
Trigger: CAATAGAAACGAAGGATTCCACGGATATCTCGGCAG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTTGGAAGGGCTTTCCTaGCCTCTATGTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLEGLS*PLCFLY
Trigger: ATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317827.9
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTATTTCGCATCTCTCCTaGGGAAGCCACGGGGCGATC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICISHLS*GSHGAI
Trigger: GATCGCCCCGTGGCTTCCCCAGGAGAGATGCGAAAT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTTCTCTTATTAAGGTaGGCACGGCTGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLLLLR*ARLSCL
Trigger: CAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYALRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCTTAGACCTTTGGCTTaGCATTCTGGGATTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLLRPLA*HSGIPR
Trigger: TCTGGGAATCCCAGAATGTCAAGCCAAAGGTCTAAG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQDHRTP*KVIGSG
Trigger: CCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATCCTGCCAATCCGAGTaGTGGATCACAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSCQSE*WITGLL
Trigger: AAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAAGCAGCGTTGGTGTCTaGGAACTCTCCTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSSVGV*ELSSNC
Trigger: GCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTCTCAAGCTTGAGAGGTaGGCTCCTCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFLKLER*APRLLP
Trigger: GGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAG...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTGCCACCTGCTACCGCTaGTTTCGCATCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFATCYR*FRISPG
Trigger: CCCAGGAGAGATGCGAAATCAGCGGTAGCAGGTGGC...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGCTAGAAGCCTGGGGCTaGAGGACTTGCTTATTTGGC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGLEAWG*RTCLFG
Trigger: GCCAAATAAGCAAGTCCTTCAGCCCCAGGCTTCTAG...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQTSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCACCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACCTGGGGCTAAAGATTaGACCCATGTGAGTAATACA +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPPGAKD*THVSNT
Trigger: TGTATTACTCACATGGGTGCAATCTTTAGCCCCAGG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCAAGGGGAGACACGTaGCCTTGGTACTATGACCAC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPRGDT*PWYYDH
Trigger: GTGGTCATAGTACCAAGGGCACGTGTCTCCCCTTGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITTKVLW*SLCISF
Trigger: GAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGATCATGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQMIMAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATCAT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACAGTTGGCCTCACGTTaGATTCCCCACTTAAAATAC +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPQLASR*IPHLKY
Trigger: GTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTTTTGTTCCGAGGACTaGCGAGATATCCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLFCSED*RDIRGI
Trigger: GATTCCACGGATATCTCGGCAGTCCTCGGAACAAAA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGGGCTGGAGCTCAAGTaGGAAGTCAGCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTGLELK*EVSWVS
Trigger: GGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACGTCTCCTTCTCTATaGCTTTCACCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELTSPSL*LSPRHQ
Trigger: CTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518415.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAATCTGGGAGATCACTaGCCCTTCATCGTTATTAAA +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCNLGDH*PFIVIK
Trigger: TTTAATAACGATGAAGGGGCAGTGATCTCCCAGATT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520611.1
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVLRSPA*RAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGATTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGCCTTCCACAGTGTTaGGATTACAGGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGLPQC*DYRNKP
Trigger: TGGCTTATTCCTGTAATCCCAACACTGTGGAAGGCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCAGCCCAGGAACATCTaGGGGCAGTTTACACTCCCT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKQPRNI*GQFTLP
Trigger: AGGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTGCCCTGTATCTGGACTaGGGATGGTTTGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLALYLD*GWFEFK
Trigger: TTTGAACTCAAACCATCCCCAGTCCAGATACAGGGC...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCCTCCACAGCAGCGTTaGTGTCTGAGAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKPPQQR*CLRTLL
Trigger: GAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTCAGGGGGAGACTTCTaGAACCTGGCATCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICSGGDF*NLASPS
Trigger: GCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTTGGAAGGGCTTTCCTaGCCTCTATGTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFLEGLS*PLCFLY
Trigger: ATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCCTGCCAAGCTTCCTTaGAAGGGCTTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHPAKLP*KGFPGL
Trigger: GAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGCTCCGTCTGAATTCTaGTGCCTTTTCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGAPSEF*CLFTSY
Trigger: GTAAGAGGTGAAAAGGCACCAGAATTCAGACGGAGC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGACGTGCTCCCAACGCTaGCCCTGTCTGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLTCSQR*PCLEFK
Trigger: TTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYALEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: SALSLASSIQVKALHRPPLRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGGCCCTCACATGTGTTaGGGCAAACTCTATACTATA +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHGPHMC*GKLYTI
Trigger: TATAGTATAGAGTTTGCCTCAACACATGTGAGGGCC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTACCTTTATGGAAAATaGGTGCTTCACTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLYLYGK*VLHSSC
Trigger: GCAGCTGGAGTGAAGCACTCATTTTCCATAAAGGTA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCCAGAGGAGATCCTTTaGGAGGAGAGTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNPEEIL*EESLLH
Trigger: ATGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTAGCAGCGTTGGTGTCTaGGAACTCTCCTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICSSVGV*ELSSNC
Trigger: GCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAGCAGCGTTGGTGTCTaGGAACTCTCCTCCAATTGC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQSSVGV*ELSSNC
Trigger: GCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTGATTTGGTCTCGGCTTaGGAATCCTCCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFDLVSA*ESSSSG
Trigger: CCCCGAGGAGGAGGATTCGCAAGCCGAGACCAAATC...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTTCATCCCGAGAACATaGATCCAGGGCGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKFIPRT*IQGERL
Trigger: CAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLTSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTCTTGGTTCTTCTGCTaGAGGGCCCTTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSWFFC*RALSRD
Trigger: GTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGACGAAGGTCCTTTGGTaGTCCCTGTGCATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSTKVLW*SLCISF
Trigger: GAAGCTGATGCACAGGGAGCACCAAAGGACCTTCGT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACATGATCATGGCTCACTaGAGCCTTGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHMIMAH*SLDLPG
Trigger: GCCTGGGAGGTCAAGGCTGCAGTGAGCCATGATCAT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKSPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQSPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTGGTCACCTACACGCTaGCCTGTATCTGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTWSPTR*PVSGLG
Trigger: CCCCAGTCCAGATACAGGGCAGCGTGTAGGTGACCA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTGCTTCGTTCCTGACATaGTGGAAAAAGTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFASFLT*WKKFLL
Trigger: CAAAAGAAACTTTTTCCAGCATGTCAGGAACGAAGC...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTACGTCTCCTTCTCTATaGCTTTCACCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICTSPSL*LSPRHQ
Trigger: CTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518415.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGCTCCAGGTCTTCCTCTaGCTCACCTTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLQVFL*LTFHLG
Trigger: GCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAG...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAGCAGCCCAAGCACAGTaGACCCGTCTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVAAQAQ*TRLLPS
Trigger: AGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGC...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTTAACGAAGGTCCTTTaGTGCTCCCTGTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGLTKVL*CSLCIS
Trigger: GCTGATGCACAGGGAGCACCAAAGGACCTTCGTTAA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAACGCTGCCCTGTATCTaGACTGGGGATGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQTLPCI*TGDGLS
Trigger: ACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGACTTCATGGCACCCGTaGGAACACAGTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGTSWHP*EHSGSR
Trigger: TCTGCTTCCACTGTGTTCCCACGGGTGCCATGAAGT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGTGATTCTTGGCTTTTaGCCCCAGGTCCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGVILGF*PQVLPI
Trigger: GATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCGTGATTCTTGGCTTTTaGCCCCAGGTCCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSVILGF*PQVLPI
Trigger: GATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGTGATTCTTGGCTTTTaGCCCCAGGTCCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQVILGF*PQVLPI
Trigger: GATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTGAGTGAGAGTCAATaGCCTGCTGTGGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLSESQ*PAVALH
Trigger: ATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGAAGTGCGAAGTCAGCTaGGTCTCCGGCTCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKKCEVS*VSGSFP
Trigger: CGGAAAGGAGCCGGAGACCCAGCTGACTTCGCACTT...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCAAATGTCCACGGGGCTaGAGCTCAAGTGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSKCPRG*SSSAKS
Trigger: TGACTTCGCACTTGAGCTCCAGCCCCGTGGACATTT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACCTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGCATATTACACCACAGTaGCTGCTTTCAAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQHITPQ*LLSKLK
Trigger: TTTGAGCTTTGAAAGCAGTCACTGTGGTGTAATATG...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGTGCCCTTGGTACTATaGCCACTAGGACAGCATTCA +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKVPLVL*PLGQHS
Trigger: TGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCAC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCCATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTACCTTTATGGAAAATaGGTGCTTCACTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLYLYGK*VLHSSC
Trigger: GCAGCTGGAGTGAAGCACTCATTTTCCATAAAGGTA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGAGCTTGAGTAACCACTaGGCTGCCCTTTGTTACCTT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSLSNH*AALCYL
Trigger: AAGGTAACAAAGGGCAGCTCAGTGGTTACTCAAGCT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGTTTACTGCTACCTCTaGGATTTAAAAGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAVYCYL*DLKEMP
Trigger: AGGCATTTCTTTTAAATCTCAGAGGTAGCAGTAAAC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATCCTGCCAATCCGAGTaGTGGATCACAGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVSCQSE*WITGLL
Trigger: AAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATTCATCAGCTTCTTGTaGTTCTTGGCTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELFISFL*FLAFGP
Trigger: GGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTGGCACTTCATTTTCTaGAGGTTTAGAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYWHFIF*RFRTSL
Trigger: AAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGCTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCTGGGGCTTTCCCACTaGCTAGGATCTGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLGLSH*LGSGLE
Trigger: TTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACATGTGGGTCAGGGGTTaGTCAGAGATTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHMWVRG*SEIWPA
Trigger: TGCAGGCCAAATCTCTGATCAACCCCTGACCCACAT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHPSSAL*GVQHGE
Trigger: CTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTTCTTCCAGGGCTGTTaGATTGGCAGCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHFFQGC*IGSKAG
Trigger: TCCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACACTCTAGGGCAGACTTaGCAAACCCTAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHTLGQT*QTLAWR
Trigger: CCTCCAAGCTAGGGTTTGGCAAGTCTGCCCTAGAGT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 4 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACAGAGTTTATTACTaGCTAGCTAGCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCNRVYY*LASRLF
Trigger: AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTT...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATTTTGTTCCGAGGACTaGCGAGATATCCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELFCSED*RDIRGI
Trigger: GATTCCACGGATATCTCGGCAGTCCTCGGAACAAAA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACAGCTCTACTCTGAGTaGAGATCTTTGTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGQLYSE*RSLSLA
Trigger: AGCTAAAGACAAAGATCTGCACTCAGAGTAGAGCTG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELISFIH*GQVLKG
Trigger: CCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGAT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGAAAATAACTGGAATCTaGAGGCCAGTCAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: VVTREAAKCRSVELTGGVKITGI*RPVKPF
Trigger: AAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGGTGATTCTTGGCTTTTaGCCCCAGGTCCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWVILGF*PQVLPI
Trigger: GATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCAC...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317827.9
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCACGTGCTCCCAACGCTaGCCCTGTCTGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSTCSQR*PCLEFK
Trigger: TTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
3UTR CAA 72 bp ATGCTGCCGCTGATAGTCTCTTCCAGAGGAGATCCTTaGAGAGGAGAGTCTGTTACATCAGTTTCTTTACTG +
Preference number: 4 (lower is better)
Translates to: MLPLIVSSRGDP*RGESVTSVSLL
Trigger: CAGTAAAGAAACTGATGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGGAAGAGACTATCAGCGGCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCTTCTCTTATTAAGGTaGGCACGGCTGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLLLLR*ARLSCL
Trigger: CAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGACTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACATATTACACCACAGTaGCTGCTTTCAAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGHITPQ*LLSKLK
Trigger: TTTGAGCTTTGAAAGCAGTCACTGTGGTGTAATATG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGCATAACGGTCATGGCTaGGAGGCCAGGACAATTATC +
Preference number: 4 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWHNGHG*EARTII
Trigger: GATAATTGTCCTGGCCTCTCAGCCATGACCGTTATG...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCCCAGTATATTCTCTTaGTCTGTACAAGCTACGATT +
Preference number: 4 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLPSIFS*SVQATI
Trigger: AATCGTAGCTTGTACAGATCAAGAGAATATACTGGG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACCCAGTATATTCTCTTaGTCTGTACAAGCTACGATT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGPSIFS*SVQATI
Trigger: AATCGTAGCTTGTACAGATCAAGAGAATATACTGGG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGGCCCTCACATGTGTTaGGGCAAACTCTATACTATA +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITGPHMC*GKLYTI
Trigger: TATAGTATAGAGTTTGCCTCAACACATGTGAGGGCC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCAGCTTGAGTAACCACTaGGCTGCCCTTTGTTACCTT +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSSLSNH*AALCYL
Trigger: AAGGTAACAAAGGGCAGCTCAGTGGTTACTCAAGCT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCTTAGACCTTTGGCTTaGCATTCTGGGATTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLRPLA*HSGIPR
Trigger: TCTGGGAATCCCAGAATGTCAAGCCAAAGGTCTAAG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTCATCAGCTTCTTGTaGTTCTTGGCTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSFISFL*FLAFGP
Trigger: GGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACGTTGGTGTCACTACTaGGAGTGCCGGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQRWCHY*ECREFL
Trigger: AAGAAACTCCCGGCACTCTCAGTAGTGACACCAACG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAAATCTGGGAGATCACTaGCCCTTCATCCCGAGAACA +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVNLGDH*PFIPRT
Trigger: TGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITTSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAATTTCTTGGTTCTTCTaGTGCAGGGCCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVISWFF*CRALSR
Trigger: CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAAT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAACTCTAGGGCAGACTTaGCAAACCCTAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQTLGQT*QTLAWR
Trigger: CCTCCAAGCTAGGGTTTGGCAAGTCTGCCCTAGAGT...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAGTGCTAGGGAAGGGCTaGCATCACCTCTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVVLGKG*HHLCLT
Trigger: TGTTAAACAGAGGTGATGGCAGCCCTTCCCTAGCAC...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACAAGGTTTCACCATGTTaGCTAGGTAGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHKVSPC*LGRFQT
Trigger: AGTTTGAAACCTACCTAGGCAACATGGTGAAACCTT...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAAGGTTTCACCATGTTaGCTAGGTAGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGKVSPC*LGRFQT
Trigger: AGTTTGAAACCTACCTAGGCAACATGGTGAAACCTT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTCACCCAGGATGGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTSPRME*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCCATCCTGGGTGA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATTTTGTTCCGAGGACTaGCGAGATATCCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQFCSED*RDIRGI
Trigger: GATTCCACGGATATCTCGGCAGTCCTCGGAACAAAA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTCTTGGGAGTCAGTGTaGTACCCAGTTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSWESV*YPVSCQ
Trigger: TTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTTTCCCTTTCAAAATaGAGGGAACCGGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICFSLSK*REPVTG
Trigger: GCCTGTCACCGGTTCCCTCCATTTTGAAAGGGAAAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGCCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 4 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCATCAGCTTCATTCACTaGGGTCAGGTTCTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSISFIH*GQVLKG
Trigger: CCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGAT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGCCTTCCACAGTGTTaGGATTACAGGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGGLPQC*DYRNKP
Trigger: TGGCTTATTCCTGTAATCCCAACACTGTGGAAGGCC...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TCAGTTGGCCTCACGTTGCATTCCCCACTTAAAATACTGCTGGATAAAGGCTATCTGCACTTCCTAATTTaGGCTGAGTCTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVGLTLHSPLKILLDKGYLHFLI*AESEEA
Trigger: AGCTTCTTCAGACTCAGCCCAAATTAGGAAGTGCAG...ATAGCCTTTATCCAGCAGTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATTTGGCTTGACATTCTaGGATTCCCAGACTATATTG +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGFGLTF*DSQTIL
Trigger: CAATATAGTCTGGGAATCCCAGAATGTCAAGCCAAA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTATCTGGACTGGGGATaGTTTGAGTTCAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFYLDWG*FEFKFV
Trigger: TACAAATTTGAACTCAAACCATCCCCAGTCCAGATA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTACTGAGTGAGAGTCAATaGCCTGCTGTGGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVLSESQ*PAVALH
Trigger: ATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAG...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTGCCGAGATATCCGTaGAATCCTTCGTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLPRYP*NPSFLL
Trigger: CAATAGAAACGAAGGATTCCACGGATATCTCGGCAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTCAAATGCAGATCTGTTaGGCTAACAGGGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFQMQIC*ANRGSV
Trigger: GACACTCCCCCTGTTAGCTCAACAGATCTGCATTTG...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGCACAATTCATTGCTaGAGTTGGATCATGCAACAG +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGGTIHC*SWIMQQ
Trigger: CTGTTGCATGATCCAACTTCAGCAATGAATTGTGCC...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGLRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCCCAGTATATTCTCTTaGTCTGTACAAGCTACGATT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNPSIFS*SVQATI
Trigger: AATCGTAGCTTGTACAGATCAAGAGAATATACTGGG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGGGACTGGGGATGGTTTaGGTTCAAATTTGTACATGT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGGLGMV*VQICTC
Trigger: ACATGTACAAATTTGAACTCAAACCATCCCCAGTCC...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TCAGTTGGCCTCACGTTGCATTCCCCACTTAAAATACTGCTGGATAAAGGCTATGGACTGGGGATGGTTTaGGTTCAAATTTGTACATGT +
Preference number: 4 (lower is better)
Translates to: SVGLTLHSPLKILLDKGYGLGMV*VQICTC
Trigger: ACATGTACAAATTTGAACTCAAACCATCCCCAGTCC...ATAGCCTTTATCCAGCAGTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGCTTCAGAATCCGAGCTaGAACTCAAGGATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSLQNPS*NSRIWS
Trigger: AGACCAAATCCTTGAGTTTCAGCTCGGATTCTGAAG...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317827.9
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTTCATCAGCTTCTTGTaGTTCTTGGCTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHFISFL*FLAFGP
Trigger: GGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAAACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: VFHHHVLLHFLIWAESEETSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGTSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCACGTCTCCTTCTCTATaGCTGCTTCTGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSTSPSL*LLLRMK
Trigger: TTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTAGGGCCTGGTATCGCTaGTCCTCTTGTTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTRAWYR*SSCLTL
Trigger: CAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCT...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAGTCCAGTTTCTCTTCTaGGTGGATTTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLVQFLF*VDFQGL
Trigger: CAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGAC...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTGCACTCTCAGCCTTTaGTTTTGTTCGAACCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHCTLSL*FCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKSSMES*TLSLCF
Trigger: AAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCCTGGGGCTAAAGATTaGACCCATGTGAGTAATACA +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICPGAKD*THVSNT
Trigger: TGTATTACTCACATGGGTGCAATCTTTAGCCCCAGG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACAAGGTTTCACCATGTTaGCTAGGTAGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNKVSPC*LGRFQT
Trigger: AGTTTGAAACCTACCTAGGCAACATGGTGAAACCTT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATTTATGGAAAATGAGTaGTTCACTCCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGFMENE*FTPAAF
Trigger: AAAAGCAGCTGGAGTGAAGCACTCATTTTCCATAAA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGCAGTGGAAGCAGATGTaGAATGAACATTTACTTGGC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGQWKQM*NEHLLG
Trigger: GCCAAGTAAATGTTCATTGCACATCTGCTTCCACTG...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTTTTGTTCCGAGGACTaGCGAGATATCCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHFCSED*RDIRGI
Trigger: GATTCCACGGATATCTCGGCAGTCCTCGGAACAAAA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTCTTGGGAGTCAGTGTaGTACCCAGTTTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKSWESV*YPVSCQ
Trigger: TTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACCTGTTCCTTCTCCATaGTCAGTTGCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQPVPSP*SVAGSS
Trigger: AGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAATCAGACAGGTGGTaGAGAAGACCCCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHKSDRW*RRPQRG
Trigger: TCCTCTTTGGGGTCTTCTCCACCACCTGTCTGATTT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGACAGAACAAAAGGTTTaGGTAGGTCACTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGTEQKV*VGHWLE
Trigger: TTCCAGCCAGTGACCTACCCAAACCTTTTGTTCTGT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACTTTGGCTTGACATTCTaGGATTCCCAGACTATATTG +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNFGLTF*DSQTIL
Trigger: CAATATAGTCTGGGAATCCCAGAATGTCAAGCCAAA...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTTTACTGTTACTCTATaGAGACTCAAGGATTTAGTG +
Preference number: 4 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFFTVTL*RLKDLV
Trigger: CACTAAATCCTTGAGTCTCCATAGAGTAACAGTAAA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACTGAGTGAGAGTCAATaGCCTGCTGTGGCACTTCAT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQLSESQ*PAVALH
Trigger: ATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACTGCCGAGATATCCGTaGAATCCTTCGTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLPRYP*NPSFLL
Trigger: CAATAGAAACGAAGGATTCCACGGATATCTCGGCAG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATTGGAAGGGCTTTCCTaGCCTCTATGTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLEGLS*PLCFLY
Trigger: ATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATGCTGGAAGCTCTTCTaGGAGGTCATACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLCWKLF*EVILVL
Trigger: AAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGGTTCTCATATCTCCTaGAGAGATCAGAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTGSHIS*RDQKGT
Trigger: GGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR TCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVAFVRT*AISSLA
Trigger: AGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGC...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR TCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAAAGAGCAGTTCTTACTTaGCTATGCTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VFHHHVLLHFLIWAESEERAVLT*LCFREK
Trigger: CTTTTCCCTGAAGCATAGTCAAGTAAGAACTGCTCT...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGAGAGCAGTTCTTACTTaGCTATGCTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSRAVLT*LCFREK
Trigger: CTTTTCCCTGAAGCATAGTCAAGTAAGAACTGCTCT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTAAGACAACAGGCTTaGATATACAGCCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLRQQA*IYSLST
Trigger: GGTGCTTAGGCTGTATATTCAAGCCTGTTGTCTTAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTTTCAAAGCTCAAATaGTTGTCAAGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLSKLK*LSSHFS
Trigger: TGAGAAGTGGCTTGACAATCATTTGAGCTTTGAAAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGCTTTCAAAGCTCAAATaGTTGTCAAGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITLSKLK*LSSHFS
Trigger: TGAGAAGTGGCTTGACAATCATTTGAGCTTTGAAAG...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGCCCAGTATATTCTCTTaGTCTGTACAAGCTACGATT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGPSIFS*SVQATI
Trigger: AATCGTAGCTTGTACAGATCAAGAGAATATACTGGG...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCAAGCTCACAATCACATaGCCACAAAGAGACAACAGT +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSKLTIT*PQRDNS
Trigger: ACTGTTGTCTCTTTGTGGTCATGTGATTGTGAGCTT...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACCAGAGGAGATCCTTTaGGAGGAGAGTCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQPEEIL*EESLLH
Trigger: ATGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTTCATCAGCTTCTTGTaGTTCTTGGCTTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKFISFL*FLAFGP
Trigger: GGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAAATCAAACTCAAGCTTaGGAGGTGAGCTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLNQTQA*EVSSST
Trigger: AGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATT...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCGTCAGCTTCGTTCCTaGCATGCTGGAAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTRQLRS*HAGKSF
Trigger: GAAACTTTTTCCAGCATGTCAGGAACGAAGCTGACG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGTTTGTCTTTGCATTTaGTCTCAGTGTACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGVCLCI*SQCTWK
Trigger: CTTCCAAGTACACTGAGATCAAATGCAAAGACAAAC...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCCCATATTGCCGTTCATaGAGAAAGCAGACACTATCA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSPYCRS*RKQTLS
Trigger: TGATAGTGTCTGCTTTCTGCATGAACGGCAATATGG...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACAACAGAGTTTATTACTaGCTAGCTAGCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: ETRALGTMTTRTAFILHHNRVYY*LASRLF
Trigger: AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTT...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCAGTTGGCCTCACGTTaGATTCCCCACTTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHQLASR*IPHLKY
Trigger: GTATTTTAAGTGGGGAATGCAACGTGAGGCCAACTG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAATTTTGTTCCGAGGACTaGCGAGATATCCGTGGAATC +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQFCSED*RDIRGI
Trigger: GATTCCACGGATATCTCGGCAGTCCTCGGAACAAAA...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCCAAATTCTTAAGTTaGTGTTCTGAGTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPKFLS*CSESGL
Trigger: GAGTCCTGACTCAGAACACCAACTTAAGAATTTGGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGGGCAACAAAACGTCATaGCAAATAGTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSGNKTS*QIVFSR
Trigger: TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCC...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGATTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: LSSNGGYFLITVMAERPGFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: IVVTREAAKCRSVELTGGFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAGGCCTTCCACAGTGTTaGGATTACAGGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLGLPQC*DYRNKP
Trigger: TGGCTTATTCCTGTAATCCCAACACTGTGGAAGGCC...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGATATCTGGACTGGGGATaGTTTGAGTTCAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRYLDWG*FEFKFV
Trigger: TACAAATTTGAACTCAAACCATCCCCAGTCCAGATA...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAAGAGCAGTTCTTACTTaGCTATGCTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVRAVLT*LCFREK
Trigger: CTTTTCCCTGAAGCATAGTCAAGTAAGAACTGCTCT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTACACTATCATTAGTCTaGGGACTAACCCTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFTLSLV*GLTLKG
Trigger: CCCCTTTAGGGTTAGTCCTCAGACTAATGATAGTGT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACTTTCAAAGCTCAAATaGTTGTCAAGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLSKLK*LSSHFS
Trigger: TGAGAAGTGGCTTGACAATCATTTGAGCTTTGAAAG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACATATTACACCACAGTaGCTGCTTTCAAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQHITPQ*LLSKLK
Trigger: TTTGAGCTTTGAAAGCAGTCACTGTGGTGTAATATG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAGGCCCTCACATGTGTTaGGGCAAACTCTATACTATA +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLGPHMC*GKLYTI
Trigger: TATAGTATAGAGTTTGCCTCAACACATGTGAGGGCC...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTGGCACTTCATTTTCTaGAGGTTTAGAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGWHFIF*RFRTSL
Trigger: AAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR TCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTGGCACTTCATTTTCTaGAGGTTTAGAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGWHFIF*RFRTSL
Trigger: AAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTGCAGATGCCTTCTTTaGCTCTTGCTTTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHCRCLL*LLLFWI
Trigger: AATCCAGAAAAGCAAGAGTCAAAGAAGGCATCTGCA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR TCA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCTCCAGGTCAGATTTaGTTGACTTTTCTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSPGQI*LTFLLR
Trigger: TCTTAAGAGAAAAGTCAATCAAATCTGACCTGGAGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTAAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCTCCTTTCTAGACTATaGAACCCTCTAGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHLLSRL*NPLGFL
Trigger: AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR GCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACCTGGGGCTAAAGATTaGACCCATGTGAGTAATACA +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLPGAKD*THVSNT
Trigger: TGTATTACTCACATGGGTGCAATCTTTAGCCCCAGG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACAACAGAGTTTATTACTaGCTAGCTAGCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNNRVYY*LASRLF
Trigger: AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGAAGGTTTCACCATGTTaGCTAGGTAGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSKVSPC*LGRFQT
Trigger: AGTTTGAAACCTACCTAGGCAACATGGTGAAACCTT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCCCCACTTAAAATACTaGTGGATAAAGGCTATCTAC +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKPHLKY*WIKAIY
Trigger: GTAGATAGCCTTTATCCAGCAGTATTTTAAGTGGGG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCCCACTTAAAATACTaGTGGATAAAGGCTATCTAC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPHLKY*WIKAIY
Trigger: GTAGATAGCCTTTATCCAGCAGTATTTTAAGTGGGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCAGTGGAAGCAGATGTaGAATGAACATTTACTTGGC +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHQWKQM*NEHLLG
Trigger: GCCAAGTAAATGTTCATTGCACATCTGCTTCCACTG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTAGTTCTTCAATTTCTTaGTTCTTCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFSSSIS*FFCCRA
Trigger: GGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 4 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTCTGTTAAGTTCGAATaGGGGATATTTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGSVKFE*GIFPHN
Trigger: GTTATGAGGAAATATCCCCCATTCGAACTTAACAGA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCTGCACTTCCTAATTTaGGCTGAGTCTGAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLHFLI*AESEEA
Trigger: AGCTTCTTCAGACTCAGCCCAAATTAGGAAGTGCAG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGCCTTTGTTACCTTTATaGAAAATGAGTGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITPLLPL*KMSASL
Trigger: GAGTGAAGCACTCATTTTCCATAAAGGTAACAAAGG...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCCAGTCAAACCTTTTTaGACAGATATCTCCTCGAAA +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGPVKPF*TDISSK
Trigger: TTTCGAGGAGATATCTGTCCAAAAAGGTTTGACTGG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACTGCCGAGATATCCGTaGAATCCTTCGTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQLPRYP*NPSFLL
Trigger: CAATAGAAACGAAGGATTCCACGGATATCTCGGCAG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTTGGAAGGGCTTTCCTaGCCTCTATGTTTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLEGLS*PLCFLY
Trigger: ATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAAGGACTTGCTTATTTaGCTCCTCATCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQKDLLI*LLIFCS
Trigger: AGAACAGAAGATGAGGAGCCAAATAAGCAAGTCCTT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR TCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAACTTCTTCATTCTTCTTaGACCCTTCCAGAACACCTT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQLLHSS*TLPEHL
Trigger: AAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAG...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTAGAGCAGTTCTTACTTaGCTATGCTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFRAVLT*LCFREK
Trigger: CTTTTCCCTGAAGCATAGTCAAGTAAGAACTGCTCT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTACATATTACACCACAGTaGCTGCTTTCAAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVHITPQ*LLSKLK
Trigger: TTTGAGCTTTGAAAGCAGTCACTGTGGTGTAATATG...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCCCAGTATATTCTCTTaGTCTGTACAAGCTACGATT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHPSIFS*SVQATI
Trigger: AATCGTAGCTTGTACAGATCAAGAGAATATACTGGG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGAAGCTCACAATCACATaGCCACAAAGAGACAACAGT +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKKLTIT*PQRDNS
Trigger: ACTGTTGTCTCTTTGTGGTCATGTGATTGTGAGCTT...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTGGCACTTCATTTTCTaGAGGTTTAGAACAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKWHFIF*RFRTSL
Trigger: AAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTC +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQISKTS*RVSSYF
Trigger: GAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGAT...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTAGTCTTTCCCAGCTTTaGAATCAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTSLSQL*NQLITD
Trigger: ATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACT...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTAGAGAAGCAGCCAAATaGAGATCTGTTGAGCTAACA +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFREAAK*RSVELT
Trigger: TGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATTAAGACAGGACAGTaGTTTAAAACACTTGCATGG +
Preference number: 4 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQIKTGQ*FKTLAW
Trigger: CCATGCAAGTGTTTTAAAGCACTGTCCTGTCTTAAT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 4 (lower is better)
Translates to: KITGIWRPVKPFWTDISSLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGTTACACCACAGTGACTaGTTTCAAAGCTCAAATGAT +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGLHHSD*FQSSND
Trigger: ATCATTTGAGCTTTGAAAGCAGTCACTGTGGTGTAA...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGAACAGAGTTTATTACTaGCTAGCTAGCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITNRVYY*LASRLF
Trigger: AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTT...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAATTTATGGAAAATGAGTaGTTCACTCCAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VFHHHVLLHFLIWAESEEFMENE*FTPAAF
Trigger: AAAAGCAGCTGGAGTGAAGCACTCATTTTCCATAAA...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTTGTCCAAATCTAACTaGATGCTAAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHLSKSN*MLRGTE
Trigger: TTCTGTGCCTCTTAGCATGCAGTTAGATTTGGACAA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACGCCTTCTTTGACTCTTaGTTTTCTGGATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHAFFDS*FSGFLH
Trigger: ATGAAGGAATCCAGAAAAGCAAGAGTCAAAGAAGGC...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CCA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGTTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: SLERRHLLSSNGGYFLITFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTCTGTTAAGTTCGAATaGGGGATATTTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSSVKFE*GIFPHN
Trigger: GTTATGAGGAAATATCCCCCATTCGAACTTAACAGA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGTCTGTTAAGTTCGAATaGGGGATATTTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGSVKFE*GIFPHN
Trigger: GTTATGAGGAAATATCCCCCATTCGAACTTAACAGA...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCCAGTCAAACCTTTTTaGACAGATATCTCCTCGAAA +
Preference number: 4 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHPVKPF*TDISSK
Trigger: TTTCGAGGAGATATCTGTCCAAAAAGGTTTGACTGG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTTGGAGTGGTTCATGTaGCTTTTACTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLEWFM*LLLLIL
Trigger: CAAAATGAGCAGTAAAAGTCACATGAACCACTCCAA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGCTTTCAAAGCTCAAATaGTTGTCAAGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKLSKLK*LSSHFS
Trigger: TGAGAAGTGGCTTGACAATCATTTGAGCTTTGAAAG...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACTTTCAAAGCTCAAATaGTTGTCAAGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLLSKLK*LSSHFS
Trigger: TGAGAAGTGGCTTGACAATCATTTGAGCTTTGAAAG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGAAGGTTTCACCATGTTaGCTAGGTAGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKKVSPC*LGRFQT
Trigger: AGTTTGAAACCTACCTAGGCAACATGGTGAAACCTT...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTTGTCCAAATCTAACTaGATGCTAAGAGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLSKSN*MLRGTE
Trigger: TTCTGTGCCTCTTAGCATGCAGTTAGATTTGGACAA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGCTTCGTTCCTGACATaGTGGAAAAAGTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTASFLT*WKKFLL
Trigger: CAAAAGAAACTTTTTCCAGCATGTCAGGAACGAAGC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 4 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 4 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTACCTTTGTTACCTTTATaGAAAATGAGTGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVPLLPL*KMSASL
Trigger: GAGTGAAGCACTCATTTTCCATAAAGGTAACAAAGG...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAAAATAACTGGAATCTaGAGGCCAGTCAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWKITGI*RPVKPF
Trigger: AAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CCA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAATTTACTGTTACTCTATaGAGACTCAAGGATTTAGTG +
Preference number: 4 (lower is better)
Translates to: VFHHHVLLHFLIWAESEEFTVTL*RLKDLV
Trigger: CACTAAATCCTTGAGTCTCCATAGAGTAACAGTAAA...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR TCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAATATGCAAAATGCACTaGTTTTTGGAGTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLICKMH*FLEWFM
Trigger: CATGAACCACTCCAAAAATCAGTGCATTTTGCATAT...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR TCA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAGTTTACTGCTACCTCTaGGATTTAAAAGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQVYCYL*DLKEMP
Trigger: AGGCATTTCTTTTAAATCTCAGAGGTAGCAGTAAAC...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR GCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGGCTGAAGTTGGATCATaGAACAGTTTTACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKAEVGS*NSFTRE
Trigger: TTCTCTTGTAAAACTGTTGCATGATCCAACTTCAGC...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTTCTGTTAAGTTCGAATaGGGGATATTTCCTCATAAC +
Preference number: 4 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFSVKFE*GIFPHN
Trigger: GTTATGAGGAAATATCCCCCATTCGAACTTAACAGA...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAAAATGCACTGATTTTTaGAGTGGTTCATGTGACTTT +
Preference number: 4 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLKCTDF*SGSCDF
Trigger: AAAGTCACATGAACCACTCCAAAAATCAGTGCATTT...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CCA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTTTAAAACACTTGCATaGATTTGGGTTTGCCTATTC +
Preference number: 4 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKFKTLA*IWVCLF
Trigger: GAATAGGCAAACCCAAATCCATGCAAGTGTTTTAAA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS GCA 90 bp CCGGCGGCCCCGCCGCGTACCGCAGACCACGTCCATTTCGCCCACTaGACGGGGGACAGGATCTGCCACGGGCTGAACGCCATGAGCGCG +
Preference number: 5 (lower is better)
Translates to: PAAPPRTADHVHFAH*TGDRICHGLNAMSA
Trigger: CGCGCTCATGGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGTGCAGTGGGCGAAATGGACGTGGTCTGCGGTACGCGGCGGGGCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000524354.5
CDS GCA 90 bp TCTGAGAGTGGGAGCCTCCCATGGCGCAGAACTTGGGGCCGGGGCTaGACCCTCCTGTGCTGGGCGGCGGGCGGCTGTGCCCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: SESGSLPWRRTWGRG*TLLCWAAGGCAQTL
Trigger: CAGGGTCTGGGCACAGCCGCCCGCCGCCCAGCACAGGAGGGTGCAGCCCCGGCCCCAAGTTCTGCGCCATGGGAGGCTCCCACTCTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521642.5
CDS GCA 90 bp ACCGCAGACCACGTCCATTTCGCCCACTGCACGGGGGACAGGATCTaGCACGGGCTGAACGCCATGAGCGCGGCTCCTCCGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TADHVHFAHCTGDRI*HGLNAMSAAPPAPA
Trigger: AGCTGGAGCCGGAGGAGCCGCGCTCATGGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGTGCAGTGGGCGAAATGGACGTGGTCTGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000524354.5
CDS GCA 90 bp ATCACGCGGATGACAGCCCGGCAGAGACCACCATTTCCCAGCAGCTaGCAGGGGCCTGTCATCACGCGACCTTCTTCACCGCGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: ITRMTARQRPPFPSS*QGPVITRPSSPRLR
Trigger: ACGCAGCCGCGGTGAAGAAGGTCGCGTGATGACAGGCCCCTGGCAGCTGCTGGGAAATGGTGGTCTCTGCCGGGCTGTCATCCGCGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520973.5
ENST00000521528.6
CDS TCA 90 bp CCCGAGGCTAAGAATGGTGTCACCTGCCTTCCGCAATCACGCGGATaGCAGCCCGGCAGAGACCACCATTTCCCAGCAGCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PEAKNGVTCLPQSRG*QPGRDHHFPAAARG
Trigger: GCCCCTGGCAGCTGCTGGGAAATGGTGGTCTCTGCCGGGCTGTCATCCGCGTGATTGCGGAAGGCAGGTGACACCATTCTTAGCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521935.5
CDS CCA 90 bp GAACAGGAAATGTCCACGGGGCTGGAGCTCAAGTGCGAAGTCAGCTaGGTCTCCGGCTCCTTTCCGAGGGGCGCCTCCTACGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: EQEMSTGLELKCEVS*VSGSFPRGASYVLP
Trigger: TGGGAGCACGTAGGAGGCGCCCCTCGGAAAGGAGCCGGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCCCGTGGACATTTCCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS CCA 90 bp CTCTCCCTTCTGCGCCACCTGCTACCGCTGATTTCGCATCTCTCCTaGGGAAGCCACGGGGCGATCAGGGAGGAGTTCCGAGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSLLRHLLPLISHLS*GSHGAIREEFRGRK
Trigger: CTTCCTTCCTCGGAACTCCTCCCTGATCGCCCCGTGGCTTCCCCAGGAGAGATGCGAAATCAGCGGTAGCAGGTGGCGCAGAAGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS GCA 90 bp AAGTCAGCTGGGTCTCCGGCTCCTTTCCGAGGGGCGCCTCCTACGTaGTCCCAACGCTGGCCCTGTCTGGAATTTAAAGCTCCGTCTGAA +
Preference number: 5 (lower is better)
Translates to: KSAGSPAPFRGAPPT*SQRWPCLEFKAPSE
Trigger: TTCAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCCTCGGAAAGGAGCCGGAGACCCAGCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS CCA 90 bp TCTCCGGCTCCTTTCCGAGGGGCGCCTCCTACGTGCTCCCAACGCTaGCCCTGTCTGGAATTTAAAGCTCCGTCTGAATTCTGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SPAPFRGAPPTCSQR*PCLEFKAPSEFWCL
Trigger: AAGGCACCAGAATTCAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCCTCGGAAAGGAGCCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS GCA 90 bp CTAGTGAAGAATGACAATGTCCTTCTGACCCAGTCCGGTGCTGGGTaGTCTGTGAGTCGCATCACGTCCTCCCCTGCCCTCAATGGTGGT +
Preference number: 5 (lower is better)
Translates to: LVKNDNVLLTQSGAG*SVSRITSSPALNGG
Trigger: ACCACCATTGAGGGCAGGGGAGGACGTGATGCGACTCACAGAGCACCCAGCACCGGACTGGGTCAGAAGGACATTGTCATTCTTCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS CCA 90 bp CTTTCCGAGGGGCGCCTCCTACGTGCTCCCAACGCTGGCCCTGTCTaGAATTTAAAGCTCCGTCTGAATTCTGGTGCCTTTTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LSEGRLLRAPNAGPV*NLKLRLNSGAFSPL
Trigger: AAGAGGTGAAAAGGCACCAGAATTCAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCCTCGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS CCA 90 bp TTCAGCTTGAATTTCCAGAGGCAGAACAGGAAATGTCCACGGGGCTaGAGCTCAAGTGCGAAGTCAGCTGGGTCTCCGGCTCCTTTCCGA +
Preference number: 5 (lower is better)
Translates to: FSLNFQRQNRKCPRG*SSSAKSAGSPAPFR
Trigger: TCGGAAAGGAGCCGGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCCCGTGGACATTTCCTGTTCTGCCTCTGGAAATTCAAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS-3UTR CAA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTGGCCTTGGAACCCTaGGGACTCTTCGGCGAGGGT +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLALEP*GLFGEG
Trigger: ACCCTCGCCGAAGAGTCCCAAGGGTTCCAAGGCCAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS GCA 90 bp GCACACCCTGTGCTGGGCACAGGCACAACGGAGTCCCAAAATAAGTaGAAGGAGCCTATTCAGCATCCAGTTAAGGAGGCAAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: AHPVLGTGTTESQNK*KEPIQHPVKEAKAT
Trigger: TGTGGCTTTTGCCTCCTTAACTGGATGCTGAATAGGCTCCTTGCACTTATTTTGGGACTCCGTTGTGCCTGTGCCCAGCACAGGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522955.5
ENST00000524193.1
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGGATTTGGTCTCGGCTaGCGAATCCTCCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHGFGLG*RILLLG
Trigger: CCCGAGGAGGAGGATTCGCAAGCCGAGACCAAATCC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGG +
Preference number: 5 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAGSQDS*KGDRIG
Trigger: CCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS GCA 90 bp GGACTCCACCTTCATCTGCTCTTTGCGGAGTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTTTGTTCGAACCTGAGCAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: GLHLHLLFAESSMES*TLSLCFCSNLSNLF
Trigger: GAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS-3UTR CAA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTTAACGAAGGTCCTTaGGTGCTCCCTGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFLNEGP*VLPVHQ
Trigger: CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTGTGATTCTTGGCTTTaGGCCCCAGGTCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVCDSWL*APGPAN
Trigger: ATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCACTCCCAACCAAGCACTaGGTTCCAGGGAAAAGGATG +
Preference number: 5 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYALPTKH*VPGKRM
Trigger: CATCCTTTTCCCTGGAACCAAGTGCTTGGTTGGGAG...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AACCTTCATAGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: NLHRGKLGGSSTVRSHSFLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...AAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCTATGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTTGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGG +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGSQDS*KGDRIG
Trigger: CCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: GETRRLQHCQVTLLSRLCASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...GCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: LSSNGGYFLITVMAERPGTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAATCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: VFHHHVLLHFLIWAESEESRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CACTCCAGCTGCTTTTACCCAGCCCAGGAACATCTGGGGGCAGTTTACACTCCCAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: HSSCFYPAQEHLGAVYTPNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...GGGAGTGTAAACTGCCCCCAGATGTTCCTGGGCTGGGTAAAAGCAGCTGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTTAACGAAGGTCCTTaGGTGCTCCCTGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLNEGP*VLPVHQ
Trigger: CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGGGGGGAATTGTTCAGTaGGCCTCACGTTGCATTCCC +
Preference number: 5 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLGGIVQ*ASRCIP
Trigger: GGGAATGCAACGTGAGGCCAACTGAACAATTCCCCC...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCGGAGACTCTCCAACCTaGACTGTGACTATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSGDSPT*TVTIWA
Trigger: TGCCCAGATAGTCACAGTCAAGGTTGGAGAGTCTCC...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TGGTGCTCCCTGTGCATCAGCTTCATTCACTGGGGTCAGGTTCTTAAGGGGTCTGCCAGTCAAACCTTTTaGGACAGATATCTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: WCSLCISFIHWGQVLKGSASQTF*DRYLLE
Trigger: TTCGAGGAGATATCTGTCCAAAAAGGTTTGACTGGC...AGACCCCTTAAGAACCTGACCCCAGTGAATGAAGCTGATGCACAGGGAGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTGTGATTCTTGGCTTTaGGCCCCAGGTCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLCDSWL*APGPAN
Trigger: ATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTGTGATTCTTGGCTTTaGGCCCCAGGTCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHCDSWL*APGPAN
Trigger: ATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVKSNSS*RGELLD
Trigger: GTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTT...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAGACCTCTCTCTGGCCTaGGAACCCTTGGGACTCTTC +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELDLSLA*EPLGLF
Trigger: GAAGAGTCCCAAGGGTTCCAAGGCCAGAGAGAGGTC...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATGGCCCTCACATGTGTaGAGGCAAACTCTATACTAT +
Preference number: 5 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYAWPSHV*RQTLYY
Trigger: ATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCCAGTCAAACCTTTTaGGACAGATATCTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYASQTF*DRYLLE
Trigger: TTCGAGGAGATATCTGTCCAAAAAGGTTTGACTGGC...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTGCTTTGAGTGTATTTaGTGTGTATGTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVCFECI*CVCGSG
Trigger: CCCTGACCCACATACACACAAAATACACTCAAAGCA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCACATCTCCAAAACTTCTaGCCGGGTCTCTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: SALSLASSIQVKALHRPPHLQNF*PGLFVF
Trigger: AAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATG...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: SALSLASSIQVKALHRPPSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGACTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp ACGCTGCCCTGTATCTGGACTGGGGATGGTTTGAGTTCAAATTTGTACATGTCCCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TLPCIWTGDGLSSNLYMSQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...GGACATGTACAAATTTGAACTCAAACCATCCCCAGTCCAGATACAGGGCAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGACAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGTCCAGGGCTGTTGCATaGGCAGCAAAGCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKSRAVA*AAKRDR
Trigger: CCTGTCCCGCTTTGCTGCCAATGCAACAGCCCTGGA...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGTTTCTTCCAGGGCTGTaGCATTGGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGFLPGL*HWQQSG
Trigger: CCCGCTTTGCTGCCAATGCAACAGCCCTGGAAGAAA...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 5 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGGGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: RGKLGGSSTVRSHSFLDYESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...ATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGGAAACTAGGAGGCTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCATGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GKLGGSSTVRSHSFLDYACMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...TGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAGCCTCCTAGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGG +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQGSQDS*KGDRIG
Trigger: CCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCC...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGSTPES*VSLLRV
Trigger: CACTCTCAGTAGTGACACCAACGACTCAGGGGTTGA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSTPES*VSLLRV
Trigger: CACTCTCAGTAGTGACACCAACGACTCAGGGGTTGA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATATGTGGGTCAGGGGTaGATCAGAGATTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELYVGQG*IRDLAC
Trigger: GCAGGCCAAATCTCTGATCAACCCCTGACCCACATA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS TCA 90 bp CCAGCATGGAGAGCTGCACTCTCAGCCTTTGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCTCTGTTTATGGTGTTTGGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: PAWRAALSAFAFVRT*AISSLALFMVFGCN
Trigger: ATTACACCCAAACACCATAAACAGAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522548.1
CDS-3UTR CAA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGACATCTCCAAAACTTCTaGCCGGGTCTCTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: LSSNGGYFLITVMAERPGHLQNF*PGLFVF
Trigger: AAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATG...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLERRHLLSSNGGYFLITLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: LSSNGGYFLITVMAERPGISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCAAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 5 (lower is better)
Translates to: SALSLASSIQVKALHRPPKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TCAGCTCTGAGCCTGGCCTCCTCCATACAAGTTAAAGCATTACACAGACCACCATGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SALSLASSIQVKALHRPPCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...TGGTGGTCTGTGTAATGCTTTAACTTGTATGGAGGAGGCCAGGCTCAGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp AGGCCAGGACAATTATCACTTAACGAAGGTCCTTTGGTGCTCCCTGTGCATCAGACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: RPGQLSLNEGPLVLPVHQTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAGTGATAATTGTCCTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTGGCCCTCACATGTGTaGAGGCAAACTCTATACTAT +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHWPSHV*RQTLYY
Trigger: ATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGGAGACTCTCCAACCTaGACTGTGACTATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKGDSPT*TVTIWA
Trigger: TGCCCAGATAGTCACAGTCAAGGTTGGAGAGTCTCC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGATCCAGAGGAGATCCTTaGAGAGGAGAGTCTGTTACA +
Preference number: 5 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRSRGDP*RGESVT
Trigger: TGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGGA...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGG +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHGSQDS*KGDRIG
Trigger: CCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCC...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATGTGATTCTTGGCTTTaGGCCCCAGGTCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQCDSWL*APGPAN
Trigger: ATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAATCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQSTPES*VSLLRV
Trigger: CACTCTCAGTAGTGACACCAACGACTCAGGGGTTGA...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICSTPES*VSLLRV
Trigger: CACTCTCAGTAGTGACACCAACGACTCAGGGGTTGA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCCTCCCAACCAAGCACTaGGTTCCAGGGAAAAGGATG +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSLPTKH*VPGKRM
Trigger: CATCCTTTTCCCTGGAACCAAGTGCTTGGTTGGGAG...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGTGTCTGAGAGGTCATACTaGTCCTTTGTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: VVTREAAKCRSVELTGGVSERSY*SFVHQS
Trigger: TGATTGATGAACAAAGGACAAGTATGACCTCTCAGA...CACTCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518809.5
ENST00000520611.1
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAACTGGGGCTGAAGGACTaGCTTATTTGGCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQLGLKD*LIWLLI
Trigger: GATGAGGAGCCAAATAAGCAAGTCCTTCAGCCCCAG...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAACTGAAACTCAAGGATTaGGTCTCGGCTTGCGAATCC +
Preference number: 5 (lower is better)
Translates to: VFHHHVLLHFLIWAESEELKLKD*VSACES
Trigger: GGATTCGCAAGCCGAGACCAAATCCTTGAGTTTCAG...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGCTGAAACTCAAGGATTaGGTCTCGGCTTGCGAATCC +
Preference number: 5 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGLKLKD*VSACES
Trigger: GGATTCGCAAGCCGAGACCAAATCCTTGAGTTTCAG...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGA +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHTFICS*RSPAWR
Trigger: TCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTACAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGCAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTCTTTTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QHCQVTLLSRLCNPLGFLLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...AAGAAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGACACGTGCCCTTGGTACTATGACCACTAGGACAGCATTCATATTACACCACTGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: ETRALGTMTTRTAFILHHCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...GTGGTGTAATATGAATGCTGTCCTAGTGGTCATAGTACCAAGGGCACGTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAGGGGGAATTGTTCAGTaGGCCTCACGTTGCATTCCC +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQGGIVQ*ASRCIP
Trigger: GGGAATGCAACGTGAGGCCAACTGAACAATTCCCCC...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGACCACTGAGCTGCCCTTaGTTACCTTTATGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRPLSCP*LPLWKM
Trigger: CATTTTCCATAAAGGTAACAAAGGGCAGCTCAGTGG...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCCAGAGGAGATCCTTaGAGAGGAGAGTCTGTTACA +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSRGDP*RGESVT
Trigger: TGTAACAGACTCTCCTCTCAAAGGATCTCCTCTGGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCACCACAGGCCAGCATaGCACACAACATCTCCATAT +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKHHRPA*HTTSPY
Trigger: ATATGGAGATGTTGTGTGCAATGCTGGCCTGTGGTG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCACCACAGGCCAGCATaGCACACAACATCTCCATAT +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICHHRPA*HTTSPY
Trigger: ATATGGAGATGTTGTGTGCAATGCTGGCCTGTGGTG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGG +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTGSQDS*KGDRIG
Trigger: CCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSTPES*VSLLRV
Trigger: CACTCTCAGTAGTGACACCAACGACTCAGGGGTTGA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp CTCCAGCACTGTCAGGTCACACTCCTTTCTAGACTATGCAACCCTCTAGGGTTTGGTCATACTTGTCCTTaGTTCATCAATCATTTGAGC +
Preference number: 5 (lower is better)
Translates to: LQHCQVTLLSRLCNPLGFGHTCP*FINHLS
Trigger: GCTCAAATGATTGATGAACAAAGGACAAGTATGACC...AAACCCTAGAGGGTTGCATAGTCTAGAAAGGAGTGTGACCTGACAGTGCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518809.5
ENST00000520611.1
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTACTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHLHSQP*LLFEPE
Trigger: CTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAG...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAGGAGGGAGTCCCATATaGCCGTTCATGCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQGGSPI*PFMQKA
Trigger: TGCTTTCTGCATGAACGGCAATATGGGACTCCCTCC...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGAGTGTCCAAATACCAGGGCAACAAAACGTCATGGCAAATAGTCTTCTCCAGAAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 5 (lower is better)
Translates to: GVSKYQGNKTSWQIVFSRKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...TCTGGAGAAGACTATTTGCCATGACGTTTTGTTGCCCTGGTATTTGGACACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGGAAACGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: DKSQTQTQQPKGTFIGGNESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...GTTTCCCCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCTTAACGAAGGTCCTTaGGTGCTCCCTGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTLNEGP*VLPVHQ
Trigger: CTGATGCACAGGGAGCACCAAAGGACCTTCGTTAAG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGTGGCCCTCACATGTGTaGAGGCAAACTCTATACTAT +
Preference number: 5 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGWPSHV*RQTLYY
Trigger: ATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCA...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GACATTATTGACCTCCCTGGGGCTAAAGATTGCACCCATGTGAGTAATACACTGTGGACTGGGGATGGTTaGAGTTCAAATTTGTACATG +
Preference number: 5 (lower is better)
Translates to: DIIDLPGAKDCTHVSNTLWTGDG*SSNLYM
Trigger: CATGTACAAATTTGAACTCAAACCATCCCCAGTCCA...CAGTGTATTACTCACATGGGTGCAATCTTTAGCCCCAGGGAGGTCAATAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GTTTTTCACCATCATGTGCTTCTGCACTTCCTAATTTGGGCTGAGTCTGAAGAAAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: VFHHHVLLHFLIWAESEEKSNSS*RGELLD
Trigger: GTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTT...TTCTTCAGACTCAGCCCAAATTAGGAAGTGCAGAAGCACATGATGGTGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317827.9
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKKSNSS*RGELLD
Trigger: GTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTT...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQKSNSS*RGELLD
Trigger: GTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TTAAGTTCGAATGGGGGATATTTCCTCATAACGGTCATGGCTGAGAGGCCAGGAGGTCATACTTGTCCTTaGTTCATCAATCATTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSSNGGYFLITVMAERPGGHTCP*FINHLS
Trigger: GCTCAAATGATTGATGAACAAAGGACAAGTATGACC...TCCTGGCCTCTCAGCCATGACCGTTATGAGGAAATATCCCCCATTCGAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518809.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGATCTGAGAGGTCATACTaGTCCTTTGTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGSERSY*SFVHQS
Trigger: TGATTGATGAACAAAGGACAAGTATGACCTCTCAGA...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518809.5
ENST00000520611.1
ENST00000521866.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTCTGAGTGCAGATCTTaGTCTTTAGCTGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGSECRS*SLAELL
Trigger: AAGCAGCTCAGCTAAAGACAAAGATCTGCACTCAGA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLLLHGQ*LEALLR
Trigger: TCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: RWWRRPQRGVTNLTHLGKASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...CTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: KITGIWRPVKPFWTDISSISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TCTTTGGAGAGGAGGCATCTGTTAAGTTCGAATGGGGGATATTTCCTCATAACGGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 5 (lower is better)
Translates to: SLERRHLLSSNGGYFLITAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...CGTTATGAGGAAATATCCCCCATTCGAACTTAACAGATGCCTCCTCTCCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGACAGGTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 5 (lower is better)
Translates to: RQVVEKTPKRSYKFNTFGAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...CCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCACCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTGGCCCTCACATGTGTaGAGGCAAACTCTATACTAT +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSWPSHV*RQTLYY
Trigger: ATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGGGAAAGGCTATCTACACTTaGGCAAAGTCAAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: IVVTREAAKCRSVELTGGKAIYT*AKSKAK
Trigger: TTTAGCTTTTGACTTTGCCAAAGTGTAGATAGCCTT...TCCCCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTCTGCAGATGCCTTCTTaGACTCTTGCTTTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICLQMPS*TLAFLD
Trigger: ATCCAGAAAAGCAAGAGTCAAAGAAGGCATCTGCAG...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp TTTTCTCTGCAAAGGGGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACTCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: FSLQRGNYSWIRQDNCGHSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...GTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCCCCTTTGCAGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
CDS-3UTR CAA 90 bp AAGGGCTGCCATCACCTCTGTTTAACACATAGCTACTTTCTTAAACACAATAAGCAGTTCTTCAATTTCTaGGTTCTTCTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: KGCHHLCLTHSYFLKHNKQFFNF*VLLLQG
Trigger: GCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTG...CTTATTGTGTTTAAGAAAGTAGCTATGTGTTAAACAGAGGTGATGGCAGCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTACAGTCTTTCCCAGCTTaGCAATCAGCTCATCACAGA +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLQSFPA*QSAHHR
Trigger: TCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTG...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp CCAGAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PEPLLDYKLEVTIGQTVSLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...GGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAATGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTTGGAAAAATTCCATGTaGGGGTTAATGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFWKNSM*GLMAHH
Trigger: GTGGTGGGCCATTAACCCCAACATGGAATTTTTCCA...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GGCAATTATTCCTGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: GNYSWIRQDNCGHKRSSQTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...TTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCAGGAATAATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GTGGTGGAGAAGACCCCAAAGAGGAGTTACAAATTTAACACATTTGGGAAAGTATGGCCCTCACATGTGTaGAGGCAAACTCTATACTAT +
Preference number: 5 (lower is better)
Translates to: VVEKTPKRSYKFNTFGKVWPSHV*RQTLYY
Trigger: ATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCA...TACTTTCCCAAATGTGTTAAATTTGTAACTCCTCTTTGGGGTCTTCTCCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGTGGACTGGGGATGGTTaGAGTTCAAATTTGTACATG +
Preference number: 5 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGWTGDG*SSNLYM
Trigger: CATGTACAAATTTGAACTCAAACCATCCCCAGTCCA...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTKSNSS*RGELLD
Trigger: GTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTT...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317827.9
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTTCTTTTGCTTCAACTaGGCTCAGAAACATCCTGTC +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICFFCFN*AQKHPV
Trigger: GACAGGATGTTTCTGAGCCAAGTTGAAGCAAAAGAA...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519416.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAGGTCATACTTGTCCTTaGTTCATCAATCATTTGAGC +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELGHTCP*FINHLS
Trigger: GCTCAAATGATTGATGAACAAAGGACAAGTATGACC...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518809.5
ENST00000520611.1
ENST00000521866.5
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATCTGAGAGGTCATACTaGTCCTTTGTTCATCAATCA +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELSERSY*SFVHQS
Trigger: TGATTGATGAACAAAGGACAAGTATGACCTCTCAGA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518809.5
ENST00000520611.1
ENST00000521866.5
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGCTTCTTCATTCTTCTaGAACCCTTCCAGAACACCT +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTASSFF*NPSRTP
Trigger: AGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAATCTCTTCATTGGCTTaGTCCAGTTTCTCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLISSLA*SSFSSA
Trigger: CGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGAT...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATCTCAGCCTTTGCTTTaGTTCGAACCTGAGCAATCT +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLSQPLL*FEPEQS
Trigger: AGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
CDS-3UTR CAA 90 bp TGGATAAGGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: WIRQDNCGHKRSSQMQICNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...ACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCCTTATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTTCAGTTGGCCTCACGTaGCATTCCCCACTTAAAATA +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTSVGLT*HSPLKI
Trigger: TATTTTAAGTGGGGAATGCAACGTGAGGCCAACTGA...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTCCACTGAGCTGCCCTTaGTTACCTTTATGGAAAATG +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTPLSCP*LPLWKM
Trigger: CATTTTCCATAAAGGTAACAAAGGGCAGCTCAGTGG...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGTATAATGGGTATCTATaGGCAAACACACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGYNGYL*ANTHLL
Trigger: TAGCAAGTGTGTGTTTGCCAATAGATACCCATTATA...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp GGCAAGATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTATTTGATGGTTTGTCTTaGCATTTGATCTCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: GKIIVVTREAAKCRSVELFDGLS*HLISVY
Trigger: GTACACTGAGATCAAATGCAAAGACAAACCATCAAA...TAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTATCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp ATAATTGTGGTCACAAGAGAAGCAGCCAAATGCAGATCTGTTGAGCTAACAGGGATCTCCAGGTCAGATTaGATTGACTTTTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: IIVVTREAAKCRSVELTGISRSD*IDFSLK
Trigger: CTTAAGAGAAAAGTCAATCAAATCTGACCTGGAGAT...CCCTGTTAGCTCAACAGATCTGCATTTGGCTGCTTCTCTTGTGACCACAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518415.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTATTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAATTGAGGAATTTGGCTTaGTTAGTACAGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQLRNLA*LVQTFS
Trigger: GGAGAAGGTCTGTACTAACAAAGCCAAATTCCTCAA...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GCCCTTTTTCTCTTCTGTAACAGAGTTTATTACTGCCTAGCTAGCAGGTTATTTAAGAGCTTGAGGAATTaGGCTTTGTTAGTACAGACC +
Preference number: 5 (lower is better)
Translates to: ALFLFCNRVYYCLASRLFKSLRN*ALLVQT
Trigger: GGTCTGTACTAACAAAGCCAAATTCCTCAAGCTCTT...AAATAACCTGCTAGCTAGGCAGTAATAAACTCTGTTACAGAAGAGAAAAAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGAGTCCAGTAAGAGCTaGAGGAATTTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTESSKS*RNLALL
Trigger: TAACAAAGCCAAATTCCTCAAGCTCTTACTGGACTC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAATGCATGGATTTGGGTTaGCCTATTCAAATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQCMDLG*PIQMKG
Trigger: CCCTTTCATTTGAATAGGCAAACCCAAATCCATGCA...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AGCTATCCTCCAAAACGAAACATAAATCTTCCCTCAGATTCCATACCATTCTGGAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: SYPPKRNINLPSDSIPFWNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...CCAGAATGGTATGGAATCTGAGGGAAGATTTATGTTTCGTTTTGGAGGATAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAACTAGGCACAATTCATaGCTGAAGTTGGATCATGCA +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQTRHNS*LKLDHA
Trigger: TGCATGATCCAACTTCAGCAATGAATTGTGCCTAGT...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp CAGGTTATTTGGCCCTCACATGTGTTGAGGCAAACTCTATACTATATTCTTACTGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 5 (lower is better)
Translates to: QVIWPSHVLRQTLYYILTAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...AGTAAGAATATAGTATAGAGTTTGCCTCAACACATGTGAGGGCCAAATAACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp GAGCCCCTTCTTGATTATAAATTGGAAGTAACAATAGGCCAAACTGTCTCCTTAGCCCAGTATATTCTCTaGATCTGTACAAGCTACGAT +
Preference number: 5 (lower is better)
Translates to: EPLLDYKLEVTIGQTVSLAQYIL*ICTSYD
Trigger: ATCGTAGCTTGTACAGATCAAGAGAATATACTGGGC...TAAGGAGACAGTTTGGCCTATTGTTACTTCCAATTTATAATCAAGAAGGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS-3UTR CAA 90 bp AAAATAACTGGAATCTGGAGGCCAGTCAAACCTTTTTGGACAGATATCTCCTCGAAGGCTATCTACACTTaGGCAAAGTCAAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: KITGIWRPVKPFWTDISSKAIYT*AKSKAK
Trigger: TTTAGCTTTTGACTTTGCCAAAGTGTAGATAGCCTT...CGAGGAGATATCTGTCCAAAAAGGTTTGACTGGCCTCCAGATTCCAGTTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS-3UTR CAA 90 bp ACTAAAGATAAATCACAAACCCAAACTCAGCAGCCTAAGGGAACCTTCATAGGGTATAATGGGTATCTATaGGCAAACACACACTTGCTA +
Preference number: 5 (lower is better)
Translates to: TKDKSQTQTQQPKGTFIGYNGYL*ANTHLL
Trigger: TAGCAAGTGTGTGTTTGCCAATAGATACCCATTATA...CCCTATGAAGGTTCCCTTAGGCTGCTGAGTTTGGGTTTGTGATTTATCTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS TCA 90 bp AAAATTACCTTCAGAATCCGAGCTTTGATGGTTTGTCTTTGCATTTaGTCTCAGTGTACTTGGAAGAGTAAACATGCCAGCAATCAAGAC +
Preference number: 5 (lower is better)
Translates to: KITFRIRALMVCLCI*SQCTWKSKHASNQD
Trigger: GTCTTGATTGCTGGCATGTTTACTCTTCCAAGTACACTGAGATCAAATGCAAAGACAAACCATCAAAGCTCGGATTCTGAAGGTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520340.5
CDS GCA 90 bp TTACAAACTAAGTTAAAGATATTCTTCTGGGCTCTTCCTAACAGATaGGATCTGACTTTAGACTTTCCTGAGTCAATCCACCCTTTCAGA +
Preference number: 5 (lower is better)
Translates to: LQTKLKIFFWALPNR*DLTLDFPESIHPFR
Trigger: TCTGAAAGGGTGGATTGACTCAGGAAAGTCTAAAGTCAGATCGCATCTGTTAGGAAGAGCCCAGAAGAATATCTTTAACTTAGTTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS-3UTR CAA 90 bp TTAAGTTGGTGTTCTGAGTCAGGACTCTATTTCAAAATAGGGTCTCACATCCAAAACACTTGCATGGATTaGGGTTTGCCTATTCAAATG +
Preference number: 5 (lower is better)
Translates to: LSWCSESGLYFKIGSHIQNTCMD*GLPIQM
Trigger: CATTTGAATAGGCAAACCCAAATCCATGCAAGTGTT...TTGGATGTGAGACCCTATTTTGAAATAGAGTCCTGACTCAGAACACCAACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518809.5
ENST00000519416.5
ENST00000520615.5
CDS GCA 72 bp GGGAGCCTCCCATGGCGCAGAACTTGGGGCCGGGGCTaGACCCTCCTGTGCTGGGCGGCGGGCGGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GSLPWRRTWGRG*TLLCWAAGGCA
Trigger: GGCACAGCCGCCCGCCGCCCAGCACAGGAGGGTGCAGCCCCGGCCCCAAGTTCTGCGCCATGGGAGGCTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521642.5
CDS CCA 72 bp GCGCGGATGTGGTTAAACGAGTGCCGTCGGGGGCCCTaGTGGAGCGCTTCCTCCCGCCGGCAGCCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: ARMWLNECRRGP*WSASSRRQPAL
Trigger: CAGCGCCGGCTGCCGGCGGGAGGAAGCGCTCCACCAGGGCCCCCGACGGCACTCGTTTAACCACATCCGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS CCA 72 bp GGGTCTGAGAGTGGGAGCCTCCCATGGCGCAGAACTTaGGGCCGGGGCTGCACCCTCCTGTGCTGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: GSESGSLPWRRT*GRGCTLLCWAA
Trigger: CGCCGCCCAGCACAGGAGGGTGCAGCCCCGGCCCCAAGTTCTGCGCCATGGGAGGCTCCCACTCTCAGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521050.5
ENST00000521642.5
ENST00000522904.5
CDS GCA 72 bp CCGCCGCGTACCGCAGACCACGTCCATTTCGCCCACTaGACGGGGGACAGGATCTGCCACGGGCTGAACGCC +
Preference number: 6 (lower is better)
Translates to: PPRTADHVHFAH*TGDRICHGLNA
Trigger: GGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGTGCAGTGGGCGAAATGGACGTGGTCTGCGGTACGCGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000524354.5
CDS GCA 72 bp CACGTCCATTTCGCCCACTGCACGGGGGACAGGATCTaGCACGGGCTGAACGCCATGAGCGCGGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: HVHFAHCTGDRI*HGLNAMSAAPP
Trigger: CGGAGGAGCCGCGCTCATGGCGTTCAGCCCGTGGCAGATCCTGTCCCCCGTGCAGTGGGCGAAATGGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000524354.5
CDS CCA 72 bp AGGCGCCAGCAAGCGTTTCCAGCAGAGGCGCGGATGTaGTTAAACGAGTGCCGTCGGGGGCCCTGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: RRQQAFPAEARM*LNECRRGPWWS
Trigger: GCTCCACCAGGGCCCCCGACGGCACTCGTTTAACCACATCCGCGCCTCTGCTGGAAACGCTTGCTGGCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS CCA 72 bp ATGTCCACGGGGCTGGAGCTCAAGTGCGAAGTCAGCTaGGTCTCCGGCTCCTTTCCGAGGGGCGCCTCCTAC +
Preference number: 6 (lower is better)
Translates to: MSTGLELKCEVS*VSGSFPRGASY
Trigger: GTAGGAGGCGCCCCTCGGAAAGGAGCCGGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCCCGTGGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS CCA 72 bp CTGCGCCACCTGCTACCGCTGATTTCGCATCTCTCCTaGGGAAGCCACGGGGCGATCAGGGAGGAGTTCCGA +
Preference number: 6 (lower is better)
Translates to: LRHLLPLISHLS*GSHGAIREEFR
Trigger: TCGGAACTCCTCCCTGATCGCCCCGTGGCTTCCCCAGGAGAGATGCGAAATCAGCGGTAGCAGGTGGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS GCA 72 bp GGGTCTCCGGCTCCTTTCCGAGGGGCGCCTCCTACGTaGTCCCAACGCTGGCCCTGTCTGGAATTTAAAGCT +
Preference number: 6 (lower is better)
Translates to: GSPAPFRGAPPT*SQRWPCLEFKA
Trigger: AGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCCTCGGAAAGGAGCCGGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS GCA 72 bp TCCGAGCTGCGGGAGGCAACTGCGGTCTCTGAGCAGTaGCCTCCTTGGGTTTCTCAGGCTGGCATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SELREATAVSEQ*PPWVSQAGILS
Trigger: AGACAGGATGCCAGCCTGAGAAACCCAAGGAGGGCACTGCTCAGAGACCGCAGTTGCCTCCCGCAGCTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523834.1
CDS GCA 72 bp TCTGACCTGCGGGAGGCAACTGCGGTCTCTGAGCAGTaGCCTCCTTGGGTTTCTCAGGCTGGCATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SDLREATAVSEQ*PPWVSQAGILS
Trigger: AGACAGGATGCCAGCCTGAGAAACCCAAGGAGGGCACTGCTCAGAGACCGCAGTTGCCTCCCGCAGGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521154.1
CDS CAA 72 bp CATGCCAGCAATCAAGACCAGGACCTCTCTCTGGCCTaGGAACCCTTGGGACTCTTCGGCGAGGGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: HASNQDQDLSLA*EPLGLFGEGPQ
Trigger: CTGGGGACCCTCGCCGAAGAGTCCCAAGGGTTCCAAGGCCAGAGAGAGGTCCTGGTCTTGATTGCTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518415.5
ENST00000520340.5
CDS TCA 72 bp TTCAGAATCCGAGCTGCGGGAGGCAACTGCGGTCTCTaGGCAGTGCCCTCCTTGGGTTTCTCAGGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: FRIRAAGGNCGL*AVPSLGFSGWH
Trigger: ATGCCAGCCTGAGAAACCCAAGGAGGGCACTGCTCAGAGACCGCAGTTGCCTCCCGCAGCTCGGATTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523834.1
CDS GCA 72 bp GGGCCCTTTCCAGGGACTCCACCTTCATCTGCTCTTTaGGGAGTCCAGCATGGAGAGCTGCACTCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GPFPGTPPSSAL*GVQHGELHSQP
Trigger: AGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS GCA 72 bp AATGACAATGTCCTTCTGACCCAGTCCGGTGCTGGGTaGTCTGTGAGTCGCATCACGTCCTCCCCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: NDNVLLTQSGAG*SVSRITSSPAL
Trigger: GAGGGCAGGGGAGGACGTGATGCGACTCACAGAGCACCCAGCACCGGACTGGGTCAGAAGGACATTGTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS CAA 72 bp AGGGCCCTTTCCAGGGACTCCACCTTCATCTGCTCTTaGCGGAGTCCAGCATGGAGAGCTGCACTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: RALSRDSTFICS*RSPAWRAALSA
Trigger: GGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS TCA 72 bp GAGAGCCTTTTTCCCTTTCAAAATGGAGGGAACCGGTaGCAGGCGCCAGCAAGCGTTTCCAGCAGAGGCGCG +
Preference number: 6 (lower is better)
Translates to: ESLFPFQNGGNR*QAPASVSSRGA
Trigger: CGCGCCTCTGCTGGAAACGCTTGCTGGCGCCTGTCACCGGTTCCCTCCATTTTGAAAGGGAAAAAGGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276520.12
ENST00000317827.9
CDS TCA 72 bp AAGAATGGTGTCACCTGCCTTCCGCAATCACGCGGATaGCAGCCCGGCAGAGACCACCATTTCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: KNGVTCLPQSRG*QPGRDHHFPAA
Trigger: AGCTGCTGGGAAATGGTGGTCTCTGCCGGGCTGTCATCCGCGTGATTGCGGAAGGCAGGTGACACCATTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521935.5
CDS CCA 72 bp CCTTTCCGAGGGGCGCCTCCTACGTGCTCCCAACGCTaGCCCTGTCTGGAATTTAAAGCTCCGTCTGAATTC +
Preference number: 6 (lower is better)
Translates to: PFRGAPPTCSQR*PCLEFKAPSEF
Trigger: GAATTCAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCCCTCGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS TCA 72 bp AGCCACACTCAAAGCCCCTTGGGACCAGCTGAGTACTaGATCAGGGGAAAGCCCTACCACCGCCTCATAGGA +
Preference number: 6 (lower is better)
Translates to: SHTQSPLGPAEY*IRGKPYHRLIG
Trigger: TCCTATGAGGCGGTGGTAGGGCTTTCCCCTGATTCAGTACTCAGCTGGTCCCAAGGGGCTTTGAGTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522955.5
ENST00000524193.1
CDS TCA 72 bp TTACCTTCAGAATCCGAGCTTCCGCAATCACGCGGATaGCAGCCCGGCAGAGACCACCATTTCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LPSESELPQSRG*QPGRDHHFPAA
Trigger: AGCTGCTGGGAAATGGTGGTCTCTGCCGGGCTGTCATCCGCGTGATTGCGGAAGCTCGGATTCTGAAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520973.5
ENST00000521528.6
CDS CCA 72 bp GGGCGCCTCCTACGTGCTCCCAACGCTGGCCCTGTCTaGAATTTAAAGCTCCGTCTGAATTCTGGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: GRLLRAPNAGPV*NLKLRLNSGAF
Trigger: AAAGGCACCAGAATTCAGACGGAGCTTTAAATTCCAGACAGGGCCAGCGTTGGGAGCACGTAGGAGGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS CCA 72 bp AATTTCCAGAGGCAGAACAGGAAATGTCCACGGGGCTaGAGCTCAAGTGCGAAGTCAGCTGGGTCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: NFQRQNRKCPRG*SSSAKSAGSPA
Trigger: AGCCGGAGACCCAGCTGACTTCGCACTTGAGCTCCAGCCCCGTGGACATTTCCTGTTCTGCCTCTGGAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519416.5
ENST00000520615.5
ENST00000522474.1
CDS CCA 72 bp GTAAACATGCCAGCAATCAAGACCAGGACCTCTCTCTaGCCTTGGAACCCTTGGGACTCTTCGGCGAGGGTC +
Preference number: 6 (lower is better)
Translates to: VNMPAIKTRTSL*PWNPWDSSARV
Trigger: GACCCTCGCCGAAGAGTCCCAAGGGTTCCAAGGCCAGAGAGAGGTCCTGGTCTTGATTGCTGGCATGTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518415.5
ENST00000520340.5
CDS CAA 72 bp CTCCTCGACTCCTCCCCCAGCTCAACCCCTGAGTCGTaGGTGTCACTACTGAGAGTGCCGGGAGTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: LLDSSPSSTPES*VSLLRVPGVSL
Trigger: TAAAGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520340.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000521935.5
ENST00000522904.5
ENST00000522955.5
CDS GCA 72 bp GTTTTGCTCAATAAGTGTGAAGTGGCCTCAGGAACGTaGAGTCCCCCGTTTCCTACCTCTTCGGCGAGGGTC +
Preference number: 6 (lower is better)
Translates to: VLLNKCEVASGT*SPPFPTSSARV
Trigger: GACCCTCGCCGAAGAGGTAGGAAACGGGGGACTGCACGTTCCTGAGGCCACTTCACACTTATTGAGCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522983.1
CDS TCA 72 bp GTCCTGCCAATCCGAGTGATGGATCACAGGACTCCTTaGAAGGTGATCGGATCGGGGTTTCAGCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: VLPIRVMDHRTP*KVIGSGFQLQE
Trigger: CTCCTGAAGCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520340.5
ENST00000520615.5
ENST00000520973.5
ENST00000521154.1
ENST00000521528.6
ENST00000521935.5
ENST00000522544.5
ENST00000522904.5
ENST00000523834.1
ENST00000524354.5
CDS CCA 72 bp CAGCTTCTTGTGATTCACCAGCAGCACACCCTGTGCTaGGCACAGGCACAACGGAGTCCCAAAATAAGTGCA +
Preference number: 6 (lower is better)
Translates to: QLLVIHQQHTLC*AQAQRSPKISA
Trigger: TGCACTTATTTTGGGACTCCGTTGTGCCTGTGCCCAGCACAGGGTGTGCTGCTGGTGAATCACAAGAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522955.5
ENST00000524193.1
CDS CAA 72 bp GGTCCTGCCAATCCGAGTGATGGATCACAGGACTCCTaGAAAGGTGATCGGATCGGGGTTTCAGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GPANPSDGSQDS*KGDRIGVSASG
Trigger: TCCTGAAGCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520340.5
ENST00000520615.5
ENST00000520973.5
ENST00000521154.1
ENST00000521528.6
ENST00000521935.5
ENST00000522544.5
ENST00000522904.5
ENST00000523834.1
ENST00000524354.5
CDS CAA 90 bp GCATCACGTCCTCCCCTGCCCTCAATGGTGGTGCCCCCATCACTTTaGACGTCATATCCAAGTTGGTTATTATGGATGGCTACCGCTCTC +
Preference number: 6 (lower is better)
Translates to: ASRPPLPSMVVPPSL*TSYPSWLLWMATAL
Trigger: GAGAGCGGTAGCCATCCATAATAACCAACTTGGATATGACGTCAAAAGTGATGGGGGCACCACCATTGAGGGCAGGGGAGGACGTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS GCA 72 bp CTTCATCTGCTCTTTGCGGAGTCCAGCATGGAGAGCTaGACTCTCAGCCTTTGCTTTTGTTCGAACCTGAGC +
Preference number: 6 (lower is better)
Translates to: LHLLFAESSMES*TLSLCFCSNLS
Trigger: GCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS GCA 72 bp GTGCTGGGCACAGGCACAACGGAGTCCCAAAATAAGTaGAAGGAGCCTATTCAGCATCCAGTTAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: VLGTGTTESQNK*KEPIQHPVKEA
Trigger: TGCCTCCTTAACTGGATGCTGAATAGGCTCCTTGCACTTATTTTGGGACTCCGTTGTGCCTGTGCCCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522955.5
ENST00000524193.1
CDS GCA 72 bp CATCAGCTTCTTGTGATTCACCAGCAGCACACCCTGTaGTGGGCACAGGCACAACGGAGTCCCAAAATAAGT +
Preference number: 6 (lower is better)
Translates to: HQLLVIHQQHTL*WAQAQRSPKIS
Trigger: ACTTATTTTGGGACTCCGTTGTGCCTGTGCCCAGCACAGGGTGTGCTGCTGGTGAATCACAAGAAGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522955.5
ENST00000524193.1
CDS CCA 72 bp GACTCCACCTTCATCTGCTCTTTGCGGAGTCCAGCATaGAGAGCTGCACTCTCAGCCTTTGCTTTTGTTCGA +
Preference number: 6 (lower is better)
Translates to: DSTFICSLRSPA*RAALSAFAFVR
Trigger: TCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS CCA 72 bp TGGAAGCTTCCTGAGTCCCTCACCAGAAGCAGGCACTaGTGCCATGCTTATTCTACAGTCTGCAGAACCATG +
Preference number: 6 (lower is better)
Translates to: WKLPESLTRSRH*CHAYSTVCRTM
Trigger: CATGGTTCTGCAGACTGTAGAATAAGCATGGCACCAGTGCCTGCTTCTGGTGAGGGACTCAGGAAGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522955.5
CDS CAA 72 bp AAGGTCAGCCAGGGCCTGTTCCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGAGGTCATACTTGTCCT +
Preference number: 6 (lower is better)
Translates to: KVSQGLFLLHGQ*LEALLRGHTCP
Trigger: AGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521568.1
ENST00000521866.5
CDS CAA 90 bp CTGGCCTCTATGTTTCCTGTATCTTCTGTGAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGACTCCTCCCCCAGCTCAACCCCTGAG +
Preference number: 6 (lower is better)
Translates to: LASMFPVSSVKSNSS*RGELLDSSPSSTPE
Trigger: CTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520340.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522904.5
ENST00000522955.5
CDS GCA 72 bp AAGCTTCCTGAGTCCCTCACCAGAAGCAGGCACTGGTaGCATGCTTATTCTACAGTCTGCAGAACCATGAAC +
Preference number: 6 (lower is better)
Translates to: KLPESLTRSRHW*HAYSTVCRTMN
Trigger: GTTCATGGTTCTGCAGACTGTAGAATAAGCATGGCACCAGTGCCTGCTTCTGGTGAGGGACTCAGGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522955.5
CDS CCA 72 bp ATTTTCTTGCTGGGCCTGAACTGCGAGCTCTGTTTCTaGGGAGGCAGCTCTACTCTGAGTGCAGATCTTTGT +
Preference number: 6 (lower is better)
Translates to: IFLLGLNCELCF*GGSSTLSADLC
Trigger: ACAAAGATCTGCACTCAGAGTAGAGCTGCCTCCCCAGAAACAGAGCTCGCAGTTCAGGCCCAGCAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518415.5
ENST00000522983.1
CDS CAA 72 bp TGCGGAGTCCAGCATGGAGAGCTGCACTCTCAGCCTTaGCTTTTGTTCGAACCTGAGCAATCTCTTCATTGG +
Preference number: 6 (lower is better)
Translates to: CGVQHGELHSQP*LLFEPEQSLHW
Trigger: CCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522548.1
CDS CAA 72 bp AAATTACCTTCAGAATCCGAGCTGAAACTCAAGGATTaGGTCTCGGCTTGCGAATCCTCCTCCTCGGGGTCG +
Preference number: 6 (lower is better)
Translates to: KLPSESELKLKD*VSACESSSSGS
Trigger: CGACCCCGAGGAGGAGGATTCGCAAGCCGAGACCAAATCCTTGAGTTTCAGCTCGGATTCTGAAGGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317827.9
ENST00000524354.5
CDS CAA 90 bp CACAGAGTTAAGGTCAGCCAGGGCCTGTTCCTTCTCCATGGTCAGTaGCTGGAAGCTCTTCTGAGAGGTCATACTTGTCCTTTGTTCATC +
Preference number: 6 (lower is better)
Translates to: HRVKVSQGLFLLHGQ*LEALLRGHTCPLFI
Trigger: GATGAACAAAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTTAACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519093.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521568.1
ENST00000521866.5
CDS CAA 90 bp GCCCTCAATGGTGGTGCCCCCATCACTTTTGACGTCATATCCAAGTaGGTTATTATGGATGGCTACCGCTCTCTAAGAGCAGGAATGTCC +
Preference number: 6 (lower is better)
Translates to: ALNGGAPITFDVISK*VIMDGYRSLRAGMS
Trigger: GGACATTCCTGCTCTTAGAGAGCGGTAGCCATCCATAATAACCAACTTGGATATGACGTCAAAAGTGATGGGGGCACCACCATTGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS CAA 72 bp TGCCCCCTAAATCTCATGTTGAAACCTGATCAACAGTaGGAAGTGAGGCCTAATGGGAGGTGGCTGGGTCAT +
Preference number: 6 (lower is better)
Translates to: CPLNLMLKPDQQ*EVRPNGRWLGH
Trigger: ATGACCCAGCCACCTCCCATTAGGCCTCACTTCCAACTGTTGATCAGGTTTCAACATGAGATTTAGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522955.5
CDS TCA 72 bp TCAACCTCTTGGGTTAACCTTTCTTCTAGTGAAGAATaGCAATGTCCTTCTGACCCAGTCCGGTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: STSWVNLSSSEE*QCPSDPVRCWV
Trigger: CACCCAGCACCGGACTGGGTCAGAAGGACATTGTCATTCTTCACTAGAAGAAAGGTTAACCCAAGAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS CAA 72 bp ATGTTTCCTGTATCTTCTGTGAAATCAAACTCAAGCTaGAGAGGTGAGCTCCTCGACTCCTCCCCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: MFPVSSVKSNSS*RGELLDSSPSS
Trigger: TGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317827.9
ENST00000518415.5
ENST00000519416.5
ENST00000520340.5
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000521935.5
ENST00000522904.5
ENST00000522955.5
CDS CAA 72 bp GGTGGTGCCCCCATCACTTTTGACGTCATATCCAAGTaGGTTATTATGGATGGCTACCGCTCTCTAAGAGCA +
Preference number: 6 (lower is better)
Translates to: GGAPITFDVISK*VIMDGYRSLRA
Trigger: TGCTCTTAGAGAGCGGTAGCCATCCATAATAACCAACTTGGATATGACGTCAAAAGTGATGGGGGCACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519093.5
CDS CAA 90 bp CCCTTTGAAATCTACATATTCACAGAGGCTAAAAGTCCAGCACTTTaGTCTAACTTCACAACCAACCGGTCCTCAGCAGGGTCTGACCTG +
Preference number: 6 (lower is better)
Translates to: PFEIYIFTEAKSPAL*SNFTTNRSSAGSDL
Trigger: CAGGTCAGACCCTGCTGAGGACCGGTTGGTTGTGAAGTTAGACAAAAGTGCTGGACTTTTAGCCTCTGTGAATATGTAGATTTCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521154.1
CDS GCA 72 bp TATTTGGCTCCTCATCTTCTGTTCTCCAAGCCAACATaGAACAGCAGAGGCGATCCACTTATGTCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: YLAPHLLFSKPT*NSRGDPLMSSL
Trigger: AAGAGAGGACATAAGTGGATCGCCTCTGCTGTTGCATGTTGGCTTGGAGAACAGAAGATGAGGAGCCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518415.5
ENST00000522474.1
ENST00000522983.1
CDS TCA 72 bp AGAGCTGCACTCTCAGCCTTTGCTTTTGTTCGAACCTaGGCAATCTCTTCATTGGCTCTGTTTATGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RAALSAFAFVRT*AISSLALFMVF
Trigger: AAACACCATAAACAGAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522548.1
CDS GCA 72 bp AGAAGCAGGCACTGGTGCCATGCTTATTCTACAGTCTaGAGAACCATGAACCAAATAAACCTCTTTTTCCTA +
Preference number: 6 (lower is better)
Translates to: RSRHWCHAYSTV*RTMNQINLFFL
Trigger: TAGGAAAAAGAGGTTTATTTGGTTCATGGTTCTGCAGACTGTAGAATAAGCATGGCACCAGTGCCTGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522955.5
CDS CAA 72 bp AGTATGTTCAGGGTGAAAGTGGGCATGGAAGGGAATTaGGGAGGTGATTATGTCAGGATTAGTGTCCTTATA +
Preference number: 6 (lower is better)
Translates to: SMFRVKVGMEGN*GGDYVRISVLI
Trigger: TATAAGGACACTAATCCTGACATAATCACCTCCCAAATTCCCTTCCATGCCCACTTTCACCCTGAACATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522752.5
CDS TCA 72 bp TTCAGAATCCGAGCTTTGATGGTTTGTCTTTGCATTTaGTCTCAGTGTACTTGGAAGAGTAAACATGCCAGC +
Preference number: 6 (lower is better)
Translates to: FRIRALMVCLCI*SQCTWKSKHAS
Trigger: GCTGGCATGTTTACTCTTCCAAGTACACTGAGATCAAATGCAAAGACAAACCATCAAAGCTCGGATTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520340.5
CDS GCA 72 bp CTTCAGGAGTCTCAAAATTACCTTCAGAATCCGAGCTaGCAAGGAGGAAAAATGAGGAATTACCACTTTCAA +
Preference number: 6 (lower is better)
Translates to: LQESQNYLQNPS*QGGKMRNYHFQ
Trigger: TTGAAAGTGGTAATTCCTCATTTTTCCTCCTTGGCAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521154.1
CDS CAA 90 bp GGGCACCTTGAACTCTCCTGTCTCCAGAGCTATGAAAAATGTTTGTaGTTTATAAGCTACCTAGCTTACATATTTTGTTATACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GHLELSCLQSYEKCL*FISYLAYIFCYTRL
Trigger: CAGCCTGGTATAACAAAATATGTAAGCTAGGTAGCTTATAAACAACAAACATTTTTCATAGCTCTGGAGACAGGAGAGTTCAAGGTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522752.5
CDS CCA 72 bp TTTCTTAATGGAACGTCAGCTTCGTTCCTGACATGCTaGAAAAAGTTTCTTTTGCTTCAACTTGGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: FLNGTSASFLTC*KKFLLLQLGSE
Trigger: TTCTGAGCCAAGTTGAAGCAAAAGAAACTTTTTCCAGCATGTCAGGAACGAAGCTGACGTTCCATTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519416.5
ENST00000520615.5
CDS CAA 72 bp AGGAATTACCACTTTCAACGGTATTTCCGACACCCTTaGAAATCTACATATTCACAGAGGCTAAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: RNYHFQRYFRHP*KSTYSQRLKVQ
Trigger: CTGGACTTTTAGCCTCTGTGAATATGTAGATTTCAAAGGGTGTCGGAAATACCGTTGAAAGTGGTAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521154.1
CDS GCA 72 bp TATTCAGCTACAATTTTCCTCATCTCCAAAACTTCTTaGCGGGTCTCTTCGTATTTCTTCTTCCATTCATTT +
Preference number: 6 (lower is better)
Translates to: YSATIFLISKTS*RVSSYFFFHSF
Trigger: AAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522752.5
CDS CAA 72 bp ATATTCAGCTACAATTTTCCTCATCTCCAAAACTTCTaGCCGGGTCTCTTCGTATTTCTTCTTCCATTCATT +
Preference number: 6 (lower is better)
Translates to: IFSYNFPHLQNF*PGLFVFLLPFI
Trigger: AATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000276520.12
ENST00000317827.9
ENST00000518415.5
ENST00000518809.5
ENST00000519416.5
ENST00000520611.1
ENST00000520615.5
ENST00000520973.5
ENST00000521866.5
ENST00000522752.5
CDS CAA 72 bp CTTGAACTCTCCTGTCTCCAGAGCTATGAAAAATGTTaGTTGTTTATAAGCTACCTAGCTTACATATTTTGT +
Preference number: 6 (lower is better)
Translates to: LELSCLQSYEKC*LFISYLAYIFC
Trigger: ACAAAATATGTAAGCTAGGTAGCTTATAAACAACAAACATTTTTCATAGCTCTGGAGACAGGAGAGTTCAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522752.5