RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000176358

Ensembl transcript IDs: ENST00000326219.5, ENST00000334568.8, ENST00000352793.6, ENST00000398154.5, ENST00000436235.5, ENST00000503603.1, ENST00000608380.1, ENST00000608861.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTC +
Preference number: 1 (lower is better)
Translates to: EAQWVQCGPCVKCQR*GQETQRRELACRLV
Trigger: GACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR TCA 90 bp ACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTC +
Preference number: 1 (lower is better)
Translates to: TGDTEKRVGLPACQL*HPGRKKRHRVLWEV
Trigger: GACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CCA 90 bp CTGCTTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAG +
Preference number: 1 (lower is better)
Translates to: LLDTESPGRSPVGSV*ALCEVPAMRTGDTE
Trigger: CTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 90 bp CAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGT +
Preference number: 1 (lower is better)
Translates to: QCSLLRRSCAFMQDC*LTLRVQEEAQWVQC
Trigger: ACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 90 bp AGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTaGTGCTTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: SQCSLLRRSCAFMQD*CLTLRVQEEAQWVQ
Trigger: CTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 90 bp GACACACACACACACACACACACACACACACACACTTCGGAGGTCTaGCAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAGAGAG +
Preference number: 1 (lower is better)
Translates to: DTHTHTHTHTHTSEV*QARAHSLESTHGRE
Trigger: CTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
3UTR-3UTR CCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGACGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: TQRRELACRLVSCDIQVGRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTCGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: RVSAACYGEAVHLCRTAARHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR TCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCAAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGAC +
Preference number: 2 (lower is better)
Translates to: LLCSEMPTLSVREGRVSASVGLV*SASDED
Trigger: GTCCTCATCGCTGGCACTTCACACAAGGCCCACACT...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCACACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CAA 90 bp GACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: DTESPGRSPVGSVWA*CEVPAMRTGDTEKR
Trigger: TCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CAA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: CSLLRRSCAFMQDCC*TLRVQEEAQWVQCG
Trigger: CCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR TCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGAC +
Preference number: 2 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLSVGLV*SASDED
Trigger: GTCCTCATCGCTGGCACTTCACACAAGGCCCACACT...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR GCA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR TCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR TCA 90 bp CAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QCSLLRRSCAFMQDCCLTPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...TGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR TCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGA +
Preference number: 2 (lower is better)
Translates to: RVSAACYGEAVHLCRTAAVKCQR*GQETQR
Trigger: TCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCAC...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR GCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTCACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: RVSAACYGEAVHLCRTAAHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCA +
Preference number: 2 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLPVGSV*ALCEVP
Trigger: TGGCACTTCACACAAGGCCCACACTGAACCCACTGG...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGTTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CAA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCAGTTGGCCTGCCGGCTaGTCAGCTGTGACATCCAGG +
Preference number: 3 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCSWPAG*SAVTSR
Trigger: CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACT...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CAA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCAGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 3 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR TCA 72 bp ACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAGCGGCACCGTGTCCTC +
Preference number: 3 (lower is better)
Translates to: TEKRVGLPACQL*HPGRKKRHRVL
Trigger: GAGGACACGGTGCCGCTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 72 bp CACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: HRIQSVRVSSLL*SEMPTLSVREG
Trigger: GCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CCA 72 bp ACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: TESPGRSPVGSV*ALCEVPAMRTG
Trigger: TCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CAA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 3 (lower is better)
Translates to: RVSAACYGEAVHLCRTAAGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR-3UTR CAA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 3 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR TCA 72 bp AGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGACAGGAGACACAGAGAA +
Preference number: 3 (lower is better)
Translates to: RKKPSGFSVGLV*SASDEDRRHRE
Trigger: TTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 72 bp GATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGCTGTGCATTTATGCAG +
Preference number: 3 (lower is better)
Translates to: DANSECEGGQSQ*SLLRRSCAFMQ
Trigger: CTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR GCA 72 bp ACACACACACACACACACACACACACTTCGGAGGTCTaGCAGGCCAGGGCTCATAGCCTTGAATCTACCCAT +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTSEV*QARAHSLESTH
Trigger: ATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR TCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTTCCTGCAGCTGGAGCTaGATGCTGGGGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGASCSWS*MLGPAP
Trigger: AGGCGCTGGCCCCAGCATTCAGCTCCAGCTGCAGGA...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGGCTGGAGCTGAATGCTaGGGCCAGCGCCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQAGAEC*GQRLPR
Trigger: CCTGGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGC...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCTCCTGCAGCTGGAGCTaGATGCTGGGGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDISCSWS*MLGPAP
Trigger: AGGCGCTGGCCCCAGCATTCAGCTCCAGCTGCAGGA...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCAGCAGCTGGAGCTGAATaGTGGGGCCAGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAAAGAE*WGQRLP
Trigger: GGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGC...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGCAGCTGGAGCTGAATaGTGGGGCCAGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIAAGAE*WGQRLP
Trigger: GGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGGCTGGAGCTGAATGCTaGGGCCAGCGCCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRHREESWPAGLSAVTSRAGAEC*GQRLPR
Trigger: CCTGGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGC...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGTCCTGCAGCTGGAGCTaGATGCTGGGGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVSCSWS*MLGPAP
Trigger: AGGCGCTGGCCCCAGCATTCAGCTCCAGCTGCAGGA...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGTCCTGCAGCTGGAGCTaGATGCTGGGGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMSCSWS*MLGPAP
Trigger: AGGCGCTGGCCCCAGCATTCAGCTCCAGCTGCAGGA...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTCTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGALSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGGCAGCTGGAGCTGAATaGTGGGGCCAGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVAAGAE*WGQRLP
Trigger: GGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGC...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGCAGCTGGAGCTGAATaGTGGGGCCAGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIAAGAE*WGQRLP
Trigger: AGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334568.8
CDS-3UTR GCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGGGCCTCATCCTCTCTaGCTCCCACTCGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIGPHPL*LPLASP
Trigger: TGGGGAAGCGAGTGGGAGGCAGAGAGGATGAGGCCC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352793.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACTTCGGAGGTCTGCCAGGCCAGGGCCACACTTCGGAGGTCTaGCAGGCCAGGGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFGGLPGQGHTSEV*QARAHS
Trigger: GCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTG...GCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGGCTGGAGCTGAATGCTaGGGCCAGCGCCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMAGAEC*GQRLPR
Trigger: CCTGGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGC...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGGCTGGAGCTGAATGCTaGGGCCAGCGCCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVAGAEC*GQRLPR
Trigger: CCTGGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGC...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGCGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTACGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp TGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CEGGQSQCSLLRRSCAFMRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...CATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGAVKCQR*GQETQR
Trigger: TCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCAC...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTCATCACCTGCCACAGTaGACACGGACAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGAHHLPQ*TRTAPS
Trigger: TGATGGAGCTGTCCGTGTGCACTGTGGCAGGTGATG...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGCAGCTGGAGCTGAATaGTGGGGCCAGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVAAGAE*WGQRLP
Trigger: GGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGC...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326219.5
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGARTGLP*PSSPPA
Trigger: TGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCT...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: QETQRRELACRLVSCDIQGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...CTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: RRHREESWPAGLSAVTSRGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTCGGCACCGTGTCCTCTaGGAAGTCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVRHRVL*EVCGGG
Trigger: GCCCCCACCACAGACTTCCCAGAGGACACGGTGCCG...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAGCTGGAGCTGAATGCTaGGGCCAGCGCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQRRELACRLVSCDIQVGAGAEC*GQRLPP
Trigger: TGGAGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGC...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334568.8
CDS-3UTR TCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGAC +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDISVGLV*SASDED
Trigger: GTCCTCATCGCTGGCACTTCACACAAGGCCCACACT...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACAAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGAC +
Preference number: 4 (lower is better)
Translates to: EDRRHREESWPAGLSAVTSVGLV*SASDED
Trigger: GTCCTCATCGCTGGCACTTCACACAAGGCCCACACT...TGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTAACGTGTGTTCCAGCTaGTATGCTCCCACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGANVCSS*YAPTRF
Trigger: GAAGCGAGTGGGAGCATATCAGCTGGAACACACGTT...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398154.5
CDS-3UTR GCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCACTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSALSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTAGAGTCAGTGCAGCTTaGTACGGCGAAGCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGARVSAA*YGEAVH
Trigger: ATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: TQRRELACRLVSCDIQVGGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ACACACACACACACACTTCGGAGGTCTGCCAGGCCAGGGCTCATAGCCTTGAATCTGCCGATTATCCCCTaGCCTCGTCAGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: THTHTLRRSARPGLIALNLPIIP*PRQSLS
Trigger: GGAGAGGCTCTGACGAGGGCAGGGGATAATCGGCAG...ATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACACCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EDRRHREESWPAGLSAVTPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...TGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp CAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: QETQRRELACRLVSCDIQVKCQR*GQETQR
Trigger: TCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCAC...CTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIVKCQR*GQETQR
Trigger: TCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCAC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCACCTCTCTGCCTTCTGTaGACAGGCTTCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAPLCLL*TGFSCP
Trigger: TGGGCAAGAGAAGCCTGTTCACAGAAGGCAGAGAGG...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334568.8
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGACTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: TQRRELACRLVSCDIQVGLSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMLSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QETQRRELACRLVSCDIQRTGLP*PSSPPA
Trigger: TGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCT...CTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACACCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: EDRRHREESWPAGLSAVTPKELA*LARLHL
Trigger: GAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGG...TGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RRHREESWPAGLSAVTSRRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGGCTACGGCGAAGCTGTaGATTTATGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQATAKL*IYAGLL
Trigger: CAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGC...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGAGGGCAGAGTCAGTaGAGCTTGCTACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVGGQSQ*SLLRRS
Trigger: GCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCC...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGTGCGAGTCTCCTCACTaGTGTGCAGTGAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQCESPH*CAVRCQ
Trigger: TTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCA...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACTTCGGAGGTCTGCCAGGCCAGGGCTCAGAGAGTCAGACAACTTaGCTTGCAGACTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHFGGLPGQGSESQTT*LADCLL
Trigger: GAGCAGGCAGTCTGCAAGGCAAGTTGTCTGACTCTC...TGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CCA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RRHREESWPAGLSAVTSRPVGSV*ALCEVP
Trigger: TGGCACTTCACACAAGGCCCACACTGAACCCACTGG...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CAA 72 bp AGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATGAGGACAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: SPGRSPVGSVWA*CEVPAMRTGDT
Trigger: TGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGGGGGCTTTTACTCTaGACCTTGGGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLWGLLL*TLGLIL
Trigger: GAGGATGAGGCCCAAGGTTCAGAGTAAAAGCCCCCA...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTACCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCGGCTTGTCAGCTGTaGCATCCAGGTAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMPACQL*HPGRKK
Trigger: CTTCTTCCTACCTGGATGTCACAGCTGACAAGCCGG...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTAGTGTGGGCCTTGTGTaGAGTGCCAGCGATGAGGAC +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVSVGLV*SASDED
Trigger: GTCCTCATCGCTGGCACTTCACACAAGGCCCACACT...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCATCACCTGCCACAGTaGACACGGACAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMHHLPQ*TRTAPS
Trigger: TGATGGAGCTGTCCGTGTGCACTGTGGCAGGTGATG...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTACATCACCTGCCACAGTaGACACGGACAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLHHLPQ*TRTAPS
Trigger: TGATGGAGCTGTCCGTGTGCACTGTGGCAGGTGATG...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGCATCACCTGCCACAGTaGACACGGACAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVHHLPQ*TRTAPS
Trigger: TGATGGAGCTGTCCGTGTGCACTGTGGCAGGTGATG...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGCTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLLSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCCAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAGAGAGTCAGACAACTCTCTCCACCATCACCTaGCACAGTGCACACGGACAG +
Preference number: 4 (lower is better)
Translates to: ARPGLIALNLPMVESQTTLSTIT*HSAHGQ
Trigger: CTGTCCGTGTGCACTGTGGCAGGTGATGGTGGAGAG...AGTTGTCTGACTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR GCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLRTGLP*PSSPPA
Trigger: TGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCT...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVRTGLP*PSSPPA
Trigger: TGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCT...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVPKELA*LARLHL
Trigger: GAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGG...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMPKELA*LARLHL
Trigger: GAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGG...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCAAGAGTCAGTGCAGCTTaGTACGGCGAAGCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSARVSAA*YGEAVH
Trigger: ATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIVSSLL*SEMPTL
Trigger: CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGAC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: RRHREESWPAGLSAVTSRVSSLL*SEMPTL
Trigger: CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGAC...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCATCAGCCCAAAGAACTaGCTTGCCTTGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQETQRRELACRLVSCDIISPKN*LALPVF
Trigger: GAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGAT...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTACACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGACCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TQRRELACRLVSCDIQVGPVGSV*ALCEVP
Trigger: TGGCACTTCACACAAGGCCCACACTGAACCCACTGG...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCPVGSV*ALCEVP
Trigger: TGGCACTTCACACAAGGCCCACACTGAACCCACTGG...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGGTGAAGTGCCAGCGATaGGGACAGGAGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLVKCQR*GQETQR
Trigger: TCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCAC...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGCCTCTCTGCCTTCTGTaGACAGGCTTCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLPLCLL*TGFSCP
Trigger: TGGGCAAGAGAAGCCTGTTCACAGAAGGCAGAGAGG...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334568.8
ENST00000398154.5
ENST00000436235.5
CDS-3UTR TCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGCCTCTCTGCCTTCTGTaGACAGGCTTCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLPLCLL*TGFSCP
Trigger: TGGGCAAGAGAAGCCTGTTCACAGAAGGCAGAGAGG...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334568.8
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACATCACCTGCCACAGTaGACACGGACAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QCSLLRRSCAFMQDCCLTHHLPQ*TRTAPS
Trigger: TGATGGAGCTGTCCGTGTGCACTGTGGCAGGTGATG...TGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLRTGLP*PSSPPA
Trigger: TGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCT...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLPKELA*LARLHL
Trigger: GAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGG...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGAGAAGAGAGTTGGCCTaGCGGCTTGTCAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLRRELA*RLVSCD
Trigger: GTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCT...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGGCTACGGCGAAGCTGTaGATTTATGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: ARHRIQSVRVSSLLCSEMATAKL*IYAGLL
Trigger: CAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGC...CATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAAGAAGAGTCAGTGCAGCTTaGTACGGCGAAGCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QRRELACRLVSCDIQVGRRVSAA*YGEAVH
Trigger: ATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT...TCTTCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTAGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLVSSLL*SEMPTL
Trigger: CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGAC...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVVSSLL*SEMPTL
Trigger: CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGAC...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCGAGTCTCCTCACTaGTGTGCAGTGAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLCESPH*CAVRCQ
Trigger: TTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCA...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp GCCAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAGAGAGTCAGACAACTGGGATCTTCTGCCTCTaGACTGCCGATTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: ARPGLIALNLPMVESQTTGIFCL*TADYPL
Trigger: CAGGGGATAATCGGCAGTGCAGAGGCAGAAGATCCC...AGTTGTCTGACTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACTTCGGAGGTCTGCCAGGCCAGGGCTCATAATGCAGGGGATCTTCTaGCTCTGCACTGCCGATTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTLRRSARPGLIMQGIF*LCTADY
Trigger: ATAATCGGCAGTGCAGAGGCAGAAGATCCCCTGCAT...TATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CCA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGTTTTACTCTGAACCTTaGGCCTCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQFYSEP*ASSSLP
Trigger: AGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAA...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGCACAGAGAAGAGAGTTaGCCTGCCGGCTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLHREES*PAGLSA
Trigger: AGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTG...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTCCAGTGGGTTCAGTGTaGGCCTTGTGTGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RVSAACYGEAVHLCRTAAPVGSV*ALCEVP
Trigger: TGGCACTTCACACAAGGCCCACACTGAACCCACTGG...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
3UTR CAA 72 bp ACACTTCGGAGGTCTGCCAGGCCAGGGCTCATAGCCTaGAATCTACCCATGGTAGAGAGTCAGACAACTTGC +
Preference number: 4 (lower is better)
Translates to: TLRRSARPGLIA*NLPMVESQTTC
Trigger: GCAAGTTGTCTGACTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR GCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCATTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGTTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CEVPAMRTGDTEKRVGLPFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...CGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGGCTACGGCGAAGCTGTaGATTTATGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLATAKL*IYAGLL
Trigger: CAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGC...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTGCTACGGCGAAGCTGTaGATTTATGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: RVSAACYGEAVHLCRTAAATAKL*IYAGLL
Trigger: CAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGC...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGGCTACGGCGAAGCTGTaGATTTATGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLATAKL*IYAGLL
Trigger: CAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGC...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTAGAGTCAGTGCAGCTTaGTACGGCGAAGCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RVSAACYGEAVHLCRTAARVSAA*YGEAVH
Trigger: ATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT...AGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGTCTCCTCACTGCTGTaGAGTGAGATGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVVSSLL*SEMPTL
Trigger: CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGAC...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGTGCGAGTCTCCTCACTaGTGTGCAGTGAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLCESPH*CAVRCQ
Trigger: TTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCA...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGTGCGAGTCTCCTCACTaGTGTGCAGTGAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLCESPH*CAVRCQ
Trigger: TTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCA...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTTGCGAGTCTCCTCACTaGTGTGCAGTGAGATGCCAA +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVCESPH*CAVRCQ
Trigger: TTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCA...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CACACTTCGGAGGTCTGCCAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAATTACCCAGGTCTCTaGTTCAGTGCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HTSEVCQARAHSLESTHGNYPGL*FSAECL
Trigger: CAGACACTCAGCACTGAAGCAGAGACCTGGGTAATT...ACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR GCA 90 bp GCCAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAGAGAGTCAGACAACTTCAGACAACTTGCCTTaGAGACTGCCTGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ARPGLIALNLPMVESQTTSDNLP*RLPALP
Trigger: TGGGAGAGCAGGCAGTCTGCAAGGCAAGTTGTCTGA...AGTTGTCTGACTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CCA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCATTTTACTCTGAACCTTaGGCCTCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLCSEMPTLSVREGRVSAFYSEP*ASSSLP
Trigger: AGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAA...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SVREGRVSAACYGEAVHLFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGTTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CEGGQSQCSLLRRSCAFMFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...CATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGTTTATGCAGGACTGCTaGTTGACACTGAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVFMQDC*LTLRVQ
Trigger: CTGGACTCTCAGTGTCAAGCAGCAGTCCTGCATAAA...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp ACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAAATTACCCAGGTCTCTaGTTCAGTGCTGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TQRRELACRLVSCDIQVGNYPGL*FSAECL
Trigger: CAGACACTCAGCACTGAAGCAGAGACCTGGGTAATT...TCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334568.8
CDS-3UTR CCA 90 bp TTGACACTGAGAGTCCAGGAAGAAGCCCAGTGGGTTCAGTGTGGGCCTTGTGTGTTTTACTCTGAACCTTaGGCCTCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTLRVQEEAQWVQCGPCVFYSEP*ASSSLP
Trigger: AGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAA...CACACAAGGCCCACACTGAACCCACTGGGCTTCTTCCTGGACTCTCAGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCTTTTACTCTGAACCTTaGGCCTCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCFYSEP*ASSSLP
Trigger: AGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAA...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTTTTTACTCTGAACCTTaGGCCTCATCCTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVFYSEP*ASSSLP
Trigger: AGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAA...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR GCA 90 bp CAGGCCAGGGCTCATAGCCTTGAATCTACCCATGGTAGAGAGTCAGACAACTTGAAGCATTTCAGACAGTaGCAGAGATATACCGTGTGT +
Preference number: 4 (lower is better)
Translates to: QARAHSLESTHGRESDNLKHFRQ*QRYTVC
Trigger: ACACACGGTATATCTCTGGCACTGTCTGAAATGCTT...CAAGTTGTCTGACTCTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS GCA 90 bp TGCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: CLPLASPSAQRTGLP*PSSPPAAGAECWGQ
Trigger: CTGGCCCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352793.6
CDS GCA 90 bp CACCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: HLPLASPSAQRTGLP*PSSPPAAGAECWGQ
Trigger: CTGGCCCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608380.1
ENST00000608861.1
CDS GCA 90 bp TTCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: FLPLASPSAQRTGLP*PSSPPAAGAECWGQ
Trigger: CTGGCCCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000436235.5
CDS GCA 90 bp CTCTCTGCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSASHSLPHQPKELA*LARLHLLQLELNAG
Trigger: CCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGCAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352793.6
CDS GCA 90 bp ATGCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: MLPLASPSAQRTGLP*PSSPPAAGAECWGQ
Trigger: CTGGCCCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398154.5
CDS TCA 90 bp AAGAACTGGCTTGCCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTaGATGCTGGGGCCAGCGCCTTCCTCCAAGGCCACAATTACCCAG +
Preference number: 5 (lower is better)
Translates to: KNWLALPVFTSCSWS*MLGPAPSSKATITQ
Trigger: CTGGGTAATTGTGGCCTTGGAGGAAGGCGCTGGCCCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334568.8
ENST00000608861.1
CDS GCA 90 bp AGGTCTTCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: RSSSHSLPHQPKELA*LARLHLLQLELNAG
Trigger: CCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000436235.5
CDS GCA 90 bp GCTGGGGCCAGCGCCTTCCTCCAAGGCCACAATTACCCAGGTCTCTaGTTCAGTGCTGAGTGTCTGTTCCTCTCCACCATCACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: AGASAFLQGHNYPGL*FSAECLFLSTITCH
Trigger: GTGGCAGGTGATGGTGGAGAGGAACAGACACTCAGCACTGAAGCAGAGACCTGGGTAATTGTGGCCTTGGAGGAAGGCGCTGGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334568.8
ENST00000608861.1
CDS GCA 90 bp TCACTCACCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLTSHSLPHQPKELA*LARLHLLQLELNAG
Trigger: CCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608861.1
CDS GCA 90 bp CTGATATGCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTTaGCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: LICSHSLPHQPKELA*LARLHLLQLELNAG
Trigger: CCCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGCATATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398154.5
CDS-3UTR CAA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCAGTTGGCCTGCCGGCTaGTCAGCTGTGACATCCAGG +
Preference number: 5 (lower is better)
Translates to: GQETQRRELACRLVSCDISWPAG*SAVTSR
Trigger: CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACT...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGACACAGAGAAGAGAGTaGGCCTGCCGGCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQTQRRE*ACRLVS
Trigger: GCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS TCA 90 bp GCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTTTTACTCTaGACCTTGGGCCTCATCCTCTCTGCCTTCTGTGAACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: AAPCPLGSLWWGLLL*TLGLILSAFCEQAS
Trigger: AGAAGCCTGTTCACAGAAGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAAGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334568.8
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGAAGAACTGGCTTGCCTaGCCCGTCTTCACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CEVPAMRTGDTEKRVGLPKNWLA*PVFTSC
Trigger: GCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTT...CGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CTGCTGTGCAGTGAGATGCCAACTCTGAGTGTGAGGGAGGGCAGAGTCAGTGCAACACAGAGAAGAGAGTaGGCCTGCCGGCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LLCSEMPTLSVREGRVSATQRRE*ACRLVS
Trigger: GCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT...TGCACTGACTCTGCCCTCCCTCACACTCAGAGTTGGCATCTCACTGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp GGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: GQETQRRELACRLVSCDIGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...GATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp AGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: RRHREESWPAGLSAVTSRGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...CCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp ATCCAGGTAGGAAGAAGCGGCACCGTGTCCTCTGGGAAGTCTGTGGTGGGGGCTATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: IQVGRSGTVSSGKSVVGAMQDCC*TLRVQE
Trigger: TTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCAT...AGCCCCCACCACAGACTTCCCAGAGGACACGGTGCCGCTTCTTCCTACCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGAAGAACTGGCTTGCCTaGCCCGTCTTCACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CEGGQSQCSLLRRSCAFMKNWLA*PVFTSC
Trigger: GCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTT...CATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGACACAGAGAAGAGAGTaGGCCTGCCGGCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: CEGGQSQCSLLRRSCAFMTQRRE*ACRLVS
Trigger: GCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT...CATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAAGAGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: QRRELACRLVSCDIQVGRGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...TCTTCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: PAMRTGDTEKRVGLPACQMQDCC*TLRVQE
Trigger: TTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCAT...CTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CAGAGAAGAGAGTTGGCCTGCCGGCTTGTCAGCTGTGACATCCAGGTAGGAAGACAGAGTCAGTGCAGCTaGCTACGGCGAAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: QRRELACRLVSCDIQVGRQSQCS*LRRSCA
Trigger: TGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTG...TCTTCCTACCTGGATGTCACAGCTGACAAGCCGGCAGGCCAACTCTCTTCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGAGTCAGTGCAGCTaGCTACGGCGAAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CEGGQSQCSLLRRSCAFMQSQCS*LRRSCA
Trigger: TGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTG...CATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS GCA 90 bp GCCTCTCCCCAAAAGTACCTCCAAGGCCACAATTACCCAGGTCTCTaGTTCAGTGCTGAGTGTCTGTTCCTCTCCACCATCACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ASPQKYLQGHNYPGL*FSAECLFLSTITCH
Trigger: GTGGCAGGTGATGGTGGAGAGGAACAGACACTCAGCACTGAAGCAGAGACCTGGGTAATTGTGGCCTTGGAGGTACTTTTGGGGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CAA 90 bp CAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACAAAGAACTGGCTTGCCTaGCCCGTCTTCACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QCSLLRRSCAFMQDCCLTKNWLA*PVFTSC
Trigger: GCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTT...TGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTAAGAACTGGCTTGCCTaGCCCGTCTTCACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVKNWLA*PVFTSC
Trigger: GCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTT...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGGGCCTTGTGTGAAGTGCCAGCGATGAGGACAGGAGACACAGAGAAGAGAGTTACACAGAGAAGAGAGTaGGCCTGCCGGCTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: WALCEVPAMRTGDTEKRVTQRRE*ACRLVS
Trigger: GCTGACAAGCCGGCAGGCCAACTCTCTTCTCTGTGT...AACTCTCTTCTCTGTGTCTCCTGTCCTCATCGCTGGCACTTCACACAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACAGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: QCSLLRRSCAFMQDCCLTGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...TGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGGGTTCAGTGTGGGCCTaGTGTGAAGTGCCAGCGATG +
Preference number: 5 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLGSVWA*CEVPAM
Trigger: CATCGCTGGCACTTCACACAAGGCCCACACTGAACC...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp TGCAGCTTGCTACGGCGAAGCTGTGCATTTATGCAGGACTGCTGCTTGACACTGCAGAGTCAGTGCAGCTaGCTACGGCGAAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CSLLRRSCAFMQDCCLTLQSQCS*LRRSCA
Trigger: TGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTG...CAGTGTCAAGCAGCAGTCCTGCATAAATGCACAGCTTCGCCGTAGCAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp AGTGTGAGGGAGGGCAGAGTCAGTGCAGCTTGCTACGGCGAAGCTGTGCATTTAATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SVREGRVSAACYGEAVHLMQDCC*TLRVQE
Trigger: TTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCAT...TAAATGCACAGCTTCGCCGTAGCAAGCTGCACTGACTCTGCCCTCCCTCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CTAGGCACAGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LGTGYRVCESPHCCAVRCMQDCC*TLRVQE
Trigger: TTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCAT...GCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCTGTGCCTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS-3UTR CAA 90 bp CACACACACACACTTCGGAGGTCTGCCAGGCCAGGGCTCATAGCCTTGAATCTACCAGGGCTCATAGCCTaGAATCTACCCATGGTAGAG +
Preference number: 5 (lower is better)
Translates to: HTHTLRRSARPGLIALNLPGLIA*NLPMVE
Trigger: CTCTACCATGGGTAGATTCAAGGCTATGAGCCCTGG...TAGATTCAAGGCTATGAGCCCTGGCCTGGCAGACCTCCGAAGTGTGTGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS-3UTR CAA 90 bp AGGATACAGAGTGTGCGAGTCTCCTCACTGCTGTGCAGTGAGATGCCAACTCTGATGCAGGACTGCTGCTaGACACTGAGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: RIQSVRVSSLLCSEMPTLMQDCC*TLRVQE
Trigger: TTCCTGGACTCTCAGTGTCAAGCAGCAGTCCTGCAT...CAGAGTTGGCATCTCACTGCACAGCAGTGAGGAGACTCGCACACTCTGTATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
CDS GCA 72 bp GCTCTCCCAGCAGCCATGCAGGGGATCTTCTGCCTCTaGACTGCCGATTATCCCCTGCCCTCGTCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: ALPAAMQGIFCL*TADYPLPSSEP
Trigger: AGGCTCTGACGAGGGCAGGGGATAATCGGCAGTGCAGAGGCAGAAGATCCCCTGCATGGCTGCTGGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503603.1
CDS CAA 90 bp CCTCTCTGCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTaGCCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGG +
Preference number: 6 (lower is better)
Translates to: PLCLPLASPSAQRTG*PCPSSPPAAGAECW
Trigger: CCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGCAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352793.6
CDS CAA 72 bp CTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTaGCCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: LPLASPSAQRTG*PCPSSPPAAGA
Trigger: AGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
ENST00000608380.1
ENST00000608861.1
CDS CAA 90 bp GAGGTCTTCCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTaGCCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGG +
Preference number: 6 (lower is better)
Translates to: EVFLPLASPSAQRTG*PCPSSPPAAGAECW
Trigger: CCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGGAAGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000436235.5
CDS GCA 72 bp CTCGCTTCCCCATCAGCCCAAAGAACTGGCTTGCCTTaGCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: LASPSAQRTGLP*PSSPPAAGAEC
Trigger: GCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326219.5
ENST00000334568.8
ENST00000352793.6
ENST00000398154.5
ENST00000436235.5
ENST00000608380.1
ENST00000608861.1
CDS CAA 90 bp GCTGATATGCTCCCACTCGCTTCCCCATCAGCCCAAAGAACTGGCTaGCCTTGCCCGTCTTCACCTCCTGCAGCTGGAGCTGAATGCTGG +
Preference number: 6 (lower is better)
Translates to: ADMLPLASPSAQRTG*PCPSSPPAAGAECW
Trigger: CCAGCATTCAGCTCCAGCTGCAGGAGGTGAAGACGGGCAAGGCAAGCCAGTTCTTTGGGCTGATGGGGAAGCGAGTGGGAGCATATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398154.5
CDS TCA 72 bp TGTCCTCTGGGAAGTCTGTGGTGGGGGCTTTTACTCTaGACCTTGGGCCTCATCCTCTCTGCCTTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: CPLGSLWWGLLL*TLGLILSAFCE
Trigger: TTCACAGAAGGCAGAGAGGATGAGGCCCAAGGTTCAGAGTAAAAGCCCCCACCACAGACTTCCCAGAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334568.8
ENST00000398154.5
ENST00000436235.5