RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000166863

Ensembl transcript IDs: ENST00000300108.7, ENST00000357616.7, ENST00000379411.6, ENST00000393867.5, ENST00000415231.1, ENST00000423597.5, ENST00000438756.5, ENST00000441881.5, ENST00000458521.7, ENST00000496757.1

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTTCCTAATGCAGTCCAGGAGTCCGGA +
Preference number: 1 (lower is better)
Translates to: EQGRERVTGACAPGD*DRERGLPNAVQESG
Trigger: TCCGGACTCCTGGACTGCATTAGGAAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR GCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGACAGGGAAAGAGGTCTTCCTAATGCA +
Preference number: 1 (lower is better)
Translates to: TRMLQEQGRERVTGA*APGDWDRERGLPNA
Trigger: TGCATTAGGAAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR GCA 90 bp TTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAG +
Preference number: 1 (lower is better)
Translates to: FNVGHYRNSRVFYSQ*PLGLGIFTMQFPHQ
Trigger: CTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR TCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: QGRERVTGACAPGDWDREVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAATGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 2 (lower is better)
Translates to: QGRERVTGACAPGDWDREWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGACAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR TCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGCCAGGAGTCCGGAAGTaGAGTATCCTGCTCAATAGT +
Preference number: 2 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQPGVRK*SILLNS
Trigger: ACTATTGAGCAGGATACTCCACTTCCGGACTCCTGG...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR TCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVELSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 2 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATAAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR CCA 90 bp AGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCAAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: STRMLQEQGRERVTGACARSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...TGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR TCA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: MLQEQGRERVTGACAPGDLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR TCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTACTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGCCTCTGAAAGAGTCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 2 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRPLKES*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGACTCTTTCAGAGG...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp AGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCATGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: STRMLQEQGRERVTGACACAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...TGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR GCA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGCCTTATGTCCTATTCTaGCTGACACCTAACAGGTTG +
Preference number: 2 (lower is better)
Translates to: LQEQGRERVTGACAPGDWPYVLF*LTPNRL
Trigger: CAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGG...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR GCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 2 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR CCA 90 bp AGGGAAAGAGGTCTTCCTAATGCAGTCCAGGAGTCCGGAAGTGGAGTAAGTTTCCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: RERGLPNAVQESGSGVSFQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...GAAACTTACTCCACTTCCGGACTCCTGGACTGCATTAGGAAGACCTCTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAACAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVEQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 2 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR CAA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATaGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: VGHYRNSRVFYSQCP*GLGIFTMQFPHQGQ
Trigger: CTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: TRMLQEQGRERVTGACAPKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR CAA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTaGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: HYRNSRVFYSQCPLG*GIFTMQFPHQGQVE
Trigger: TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR GCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTACTAACAGGTTGGGAATaGTCCCTCAATGGTAAGATT +
Preference number: 2 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVLTGWE*SLNGKI
Trigger: AATCTTACCATTGAGGGAGCATTCCCAACCTGTTAG...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR GCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCCTAACAGGTTGGGAATaGTCCCTCAATGGTAAGATT +
Preference number: 2 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVLTGWE*SLNGKI
Trigger: AATCTTACCATTGAGGGAGCATTCCCAACCTGTTAG...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR GCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGGTGGAGTACCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 2 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEVEYLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGTACTCCAC...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357616.7
3UTR-3UTR CCA 90 bp GATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTTCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: DERRGMCTNTRASKCLCVQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...AACACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGATGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR GCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DGEGVKAQECYKNREEKGKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACCAGGAGTCCGGAAGTaGAGTAAGTTTCACATGAAT +
Preference number: 2 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIPGVRK*SKFHMN
Trigger: ATTCATGTGAAACTTACTCCACTTCCGGACTCCTGG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp TTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: FNVGHYRNSRVFYSQCPLCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR-3UTR CCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGCCAGGAGTCCGGAAGTaGAGTACCTATTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERPGVRK*STYSAL
Trigger: GAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGG...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357616.7
3UTR-3UTR TCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACACTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: RKDGEGVKAQECYKNREEVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGACCTCTGAAAGAGTCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 2 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRPLKES*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGACTCTTTCAGAGG...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACATGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 2 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR TCA 90 bp AGGGAAAGAGGTCTTCCTAATGCAGTCCAGGAGTCCGGAAGTGGAGTAAGTTTCCACAATGATCTGTGTTaGTCCATCTCATCTAATCTT +
Preference number: 2 (lower is better)
Translates to: RERGLPNAVQESGSGVSFHNDLC*SISSNL
Trigger: AAGATTAGATGAGATGGATCAACACAGATCATTGTG...GAAACTTACTCCACTTCCGGACTCCTGGACTGCATTAGGAAGACCTCTTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR TCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGACACAATGATCTGTGTTaGTCCATCTCATCTAATCTT +
Preference number: 2 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGHNDLC*SISSNL
Trigger: AAGATTAGATGAGATGGATCAACACAGATCATTGTG...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR TCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTGGAGTAAGTTTCACATaGATGAAATCAGATGACACA +
Preference number: 2 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGGVSFT*MKSDDT
Trigger: TGTGTCATCTGATTTCATTCATGTGAAACTTACTCC...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR TCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAATTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 2 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVEFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR GCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGCCTTATGTCCTATTCTaGCTGACACCTAACAGGTTG +
Preference number: 2 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGPYVLF*LTPNRL
Trigger: CAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGG...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DPSHLIFKCQLPETLCPIKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR CCA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 2 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCAGGAGTCCGGAAGTaGAGTATCCTGCTCAATAGT +
Preference number: 2 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCPGVRK*SILLNS
Trigger: ACTATTGAGCAGGATACTCCACTTCCGGACTCCTGG...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR TCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGAATCAGATGACACAATaGTCTGTGTTGATCCATCTC +
Preference number: 2 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKNQMTQ*SVLIHL
Trigger: GAGATGGATCAACACAGATCATTGTGTCATCTGATT...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR TCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGGAGTAAGTTTCACATaGATGAAATCAGATGACACA +
Preference number: 2 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERGVSFT*MKSDDT
Trigger: TGTGTCATCTGATTTCATTCATGTGAAACTTACTCC...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR-3UTR TCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACTTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 2 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR CAA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 3 (lower is better)
Translates to: QGRERVTGACAPGDWDREAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR CAA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 3 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR-3UTR CAA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 3 (lower is better)
Translates to: QEQGRERVTGACAPGDWDAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR TCA 72 bp GGAAGTGGAGTACCTATTCTGCTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGACGTTCTCTTGATTCA +
Preference number: 3 (lower is better)
Translates to: GSGVPILLSGDT*GCQSWGRSLDS
Trigger: TGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAGGTACTCCACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357616.7
3UTR-3UTR CAA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCTACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 3 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR TCA 72 bp ATGCCAGCTCCCAGAAACCTTATGTCCTATTCTGCCTaGCACCTAACAGGTTGGGAATGCTCCCTCAATGGT +
Preference number: 3 (lower is better)
Translates to: MPAPRNLMSYSA*HLTGWECSLNG
Trigger: ACCATTGAGGGAGCATTCCCAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGGTTTCTGGGAGCTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR GCA 72 bp CGTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTATTTCAGGGCAAATCTA +
Preference number: 3 (lower is better)
Translates to: RASKCLCVWPTV*WALAVYFRANL
Trigger: TAGATTTGCCCTGAAATACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR-3UTR CAA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR CCA 72 bp TGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCATTGGCAGTGTATTTC +
Preference number: 3 (lower is better)
Translates to: CTNTRASKCLCV*PTVCWALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCACGTGTGTTTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
3UTR CCA 72 bp ACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTaGGGATATTCACTATGCAGTTTCCACACCAGGGTC +
Preference number: 3 (lower is better)
Translates to: TLGYSTVNAHWG*GYSLCSFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR GCA 72 bp TTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTCTaGCTGACACCTAACAGGTTGGGAATGCTCCCTCAA +
Preference number: 3 (lower is better)
Translates to: LNASSQKPYVLF*LTPNRLGMLPQ
Trigger: TTGAGGGAGCATTCCCAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGGTTTCTGGGAGCTGGCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
3UTR CCA 72 bp ACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTaGGGTTGGGGATATTCACTATGCAGTTTCCACACC +
Preference number: 3 (lower is better)
Translates to: TGTLGYSTVNAH*GWGYSLCSFHT
Trigger: GGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR GCA 72 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATATTCACTATGCAGTTT +
Preference number: 3 (lower is better)
Translates to: GHYRNSRVFYSQ*PLGLGIFTMQF
Trigger: AAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGCCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGRERVTGACAPGDWDRERVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGACCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GRERVTGACAPGDWDRERPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: VTRTGKRKGNRSVRTWGLLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...CAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTGGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LFCSRGILEDAKAGDVLLAPLTH*CCRCSC
Trigger: GCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGC...CAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAATCCGTAGGAGAGTCTaGCTGGACGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGIRRRV*LDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGACTCTCCTACGGAT...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300108.7
ENST00000458521.7
CDS-3UTR TCA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: QEQGRERVTGACAPGDWDPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGACCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GRERVTGACAPGDWDRERPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGCTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGACACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGCTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRAPLTH*CCRCSC
Trigger: GCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGC...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGAGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRERVTGACAPGDWDRERAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RTGKRKGNRSVRTWGLGQQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...CTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAGTAGGAGAGTCTGGCTaGACGCTCCTCTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGVGESG*TLLLPI
Trigger: TATGGGCAAGAGGAGCGTCCAGCCAGACTCTCCTAC...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300108.7
ENST00000458521.7
CDS-3UTR TCA 90 bp ACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TRTGKRKGNRSVRTWGLGLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: PIGVGDIHYAVSTPGSGRGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...TCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: MLQEQGRERVTGACAPGDVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRLCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGACTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGLCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QGRERVTGACAPGDWDREGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTGCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LFCSRGILEDAKAGDVLLPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...CAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR TCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCCCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGILDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRMLQEQGRERVTGACAPAPLTH*CCRCSC
Trigger: GCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGC...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: VTRTGKRKGNRSVRTWGLNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...CAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGAGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GRERVTGACAPGDWDRERGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QEQGRERVTGACAPGDWDGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAACAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QGRERVTGACAPGDWDREQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...TTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGAAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGACAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGCAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGACCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PIGVGDIHYAVSTPGSGRLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGATGTCCTATTCTGCCTaGCACCTAACAGGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRMSYSA*HLTGWE
Trigger: TTCCCAACCTGTTAGGTGTCAGGCAGAATAGGACAT...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTCACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp AGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGCTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RMLQEQGRERVTGACAPGLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...CCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTACTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGCTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCAGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: STRMLQEQGRERVTGACAARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...TGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGATGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEAPLTH*CCRCSC
Trigger: GCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGC...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGAGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAGGAAAGAGATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: EERDERRGMCTNTRASKCGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...ACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATCTCTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATAGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRLCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMLCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: MLQEQGRERVTGACAPGDNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RMLQEQGRERVTGACAPGNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...CCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATACCCTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: NTLFCSRGILEDAKAGDVQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...AACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAGGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LFCSRGILEDAKAGDVLLCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQEQGRERVTGACAPGDWCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGTGCTGCCGGTGCTCCTaGAAAGAGAGAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGCCRCS*KERNRV
Trigger: CACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCA...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTCCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TRMLQEQGRERVTGACAPPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGCCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGACCCACAAAGAAGTCATaGATGTCACGTTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: GRERVTGACAPGDWDRERPTKKS*MSRFSG
Trigger: TCCCGAGAAACGTGACATGCATGACTTCTTTGTGGG...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMELCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRTGKRKGNRSVRTWGLGPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...TCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRNAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGACTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTCTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TRMLQEQGRERVTGACAPLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCCTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAACACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVEHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: DGEGVKAQECYKNREEKGARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGACTAACAGGTTGGGAATaGTCCCTCAATGGTAAGATT +
Preference number: 4 (lower is better)
Translates to: TGKRKGNRSVRTWGLGQGLTGWE*SLNGKI
Trigger: AATCTTACCATTGAGGGAGCATTCCCAACCTGTTAG...TCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGCTAACAGGTTGGGAATaGTCCCTCAATGGTAAGATT +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRLTGWE*SLNGKI
Trigger: AATCTTACCATTGAGGGAGCATTCCCAACCTGTTAG...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGTGGAGTACCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: LQEQGRERVTGACAPGDWVEYLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGTACTCCAC...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERAPLTH*CCRCSC
Trigger: GCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGC...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAAGGAGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: DIHYAVSTPGSGRKDGEGGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...TCCTTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATAAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGINHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GCTTTAATACCCTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: ALIPYSALGGYLRMPKLGGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: MLQEQGRERVTGACAPGDGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGAGGATCTGTGCTAGCCTaGCTCAGGGCTTTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGGSVLA*LRALSN
Trigger: ATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCC...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LQEQGRERVTGACAPGDWKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTGAAGAGAGAAACCGAGTaGAGGGGATCTAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LFCSRGILEDAKAGDVLLKRETE*RGSRKA
Trigger: AGCCTTCCTAGATCCCCTCCACTCGGTTTCTCTCTT...CAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357616.7
CDS-3UTR CCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGTCTTTCCCTCTGGCTaGACGCTCCTCTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWVFPSG*TLLLPI
Trigger: TATGGGCAAGAGGAGCGTCCAGCCAGAGGGAAAGAC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGTCCTGTCTTTCCCTCTaGCTGGACGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMSCLSL*LDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGAGGGAAAGACAGGA...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGAGGGAAGACTTTCCTGTaGATCCAAGCTGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: TRTGKRKGNRSVRTWGLGGKTFL*IQADWD
Trigger: ATCCCAATCAGCTTGGATCCACAGGAAAGTCTTCCC...TCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTCCAGGAGTCCGGAAGTaGAGTACCTATTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGPGVRK*STYSAL
Trigger: GAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGG...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTGAGATGAGTGGCTTTTaGAGAGTCTCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGEMSGF*RVSGAA
Trigger: AGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTC...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGATTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRTGKRKGNRSVRTWGLGFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...TCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTTGCTGCCGGTGCTCCTaGAAAGAGAGAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: TRMLQEQGRERVTGACAPCCRCS*KERNRV
Trigger: CACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCA...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTGCTGCCGGTGCTCCTaGAAAGAGAGAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: EMKDGGCVQTHVPLSVFVCCRCS*KERNRV
Trigger: CACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCA...CACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GAGATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGCACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: EMKDGGCVQTHVPLSVFVHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...CACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCCCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: KESKHKNVTRTGKRKGNRARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...CCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKLDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AATGCAGTCCAGGAGTCCGGAAGTGGAGTACCTATTCTGCTCTCGGGGGATACTCCCACAAAGAAGTCATaGATGTCACGTTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: NAVQESGSGVPILLSGDTPTKKS*MSRFSG
Trigger: TCCCGAGAAACGTGACATGCATGACTTCTTTGTGGG...AGTATCCCCCGAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGGACTGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357616.7
CDS-3UTR GCA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACTTTAATACCCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: QEQGRERVTGACAPGDWDFNTLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAA...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp CACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: HKNVTRTGKRKGNRSVRTVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...GGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: KESKHKNVTRTGKRKGNRGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...CCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNLCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: IGVGDIHYAVSTPGSGRKNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...TTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAACAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGEQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGACCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCGTAGGAGAGTCTGGCTaGACGCTCCTCTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRVGESG*TLLLPI
Trigger: TATGGGCAAGAGGAGCGTCCAGCCAGACTCTCCTAC...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300108.7
ENST00000458521.7
CDS-3UTR CCA 90 bp CTTCCTAATGCAGTCCAGGAGTCCGGAAGTGGAGTATCCTGCTCAATAGTCAGCCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPNAVQESGSGVSCSIVSQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...GCTGACTATTGAGCAGGATACTCCACTTCCGGACTCCTGGACTGCATTAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 4 (lower is better)
Translates to: HKNVTRTGKRKGNRSVRTWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...GGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGAAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: TRTGKRKGNRSVRTWGLGNAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...TCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAATCCTGTCTTTCCCTCTaGCTGGACGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGESCLSL*LDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGAGGGAAAGACAGGA...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATGGATCCAAGCTGATTaGGATGAAGGGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGWIQAD*DEGAEE
Trigger: TTCCTCGGCCCCTTCATCCCAATCAGCTTGGATCCA...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR TCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGAGATGAGTGGCTTTTaGAGAGTCTCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWEMSGF*RVSGAA
Trigger: AGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGILGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGCTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DGEGVKAQECYKNREEKGLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGCACAATGATCTGTGTTaGTCCATCTCATCTAATCTT +
Preference number: 4 (lower is better)
Translates to: EQGRERVTGACAPGDWDRHNDLC*SISSNL
Trigger: AAGATTAGATGAGATGGATCAACACAGATCATTGTG...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTGCTGCCGGTGCTCCTaGAAAGAGAGAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGCCRCS*KERNRV
Trigger: CACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCA...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCCTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGACCCCTCACACACTGGTaGTGCCGGTGCTCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRPLTHW*CRCSCK
Trigger: TTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGG...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTG +
Preference number: 4 (lower is better)
Translates to: RKDGEGVKAQECYKNREEARTAA*SPHTLV
Trigger: CACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGC...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTCTGGATCCCTCTTGCTaGGGCCCCCGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: DPSHLIFKCQLPETLCPILDPSC*GPRQEP
Trigger: TGGTTCCTGGCGGGGGCCGCAGCAAGAGGGATCCAG...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTACCCACAAAGAAGTCATaGATGTCACGTTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVPTKKS*MSRFSG
Trigger: TCCCGAGAAACGTGACATGCATGACTTCTTTGTGGG...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCCCCACAAAGAAGTCATaGATGTCACGTTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVPTKKS*MSRFSG
Trigger: TCCCGAGAAACGTGACATGCATGACTTCTTTGTGGG...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GAAAGAGTCCTGCTCAATAGTCAGCTGCCGTCCATGATCCAGAGGAAAGAGATGCCTCTGAAAGAGTCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ERVLLNSQLPSMIQRKEMPLKES*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGACTCTTTCAGAGG...CATCTCTTTCCTCTGGATCATGGACGGCAGCTGACTATTGAGCAGGACTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGCCTCTGAAAGAGTCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWPLKES*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGACTCTTTCAGAGG...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCCTCTGAAAGAGTCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGPLKES*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGACTCTTTCAGAGG...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCTGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NAHWGWGYSLCSFHTRVRWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...CCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGTGGAGTACCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWVEYLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGTACTCCAC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGCTCTGTGCCGGGGGCTaGGTGGTCTGGCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: RKDGEGVKAQECYKNREELCAGG*VVWQDQ
Trigger: TTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAG...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TGGGAATGCTCCCTCAATGGTAAGATTATGAAAGCTGCAATTATGGGTCCCTCTAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: WECSLNGKIMKAAIMGPSNHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...AGAGGGACCCATAATTGCAGCTTTCATAATCTTACCATTGAGGGAGCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGCCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGACAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAATGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGECAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCNAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: LQEQGRERVTGACAPGDWTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGTCTTTCCCTCTGGCTaGACGCTCCTCTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: IGVGDIHYAVSTPGSGRKVFPSG*TLLLPI
Trigger: TATGGGCAAGAGGAGCGTCCAGCCAGAGGGAAAGAC...TTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTCCTGTCTTTCCCTCTaGCTGGACGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: DGEGVKAQECYKNREEKGSCLSL*LDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGAGGGAAAGACAGGA...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTTGGATCCAAGCTGATTaGGATGAAGGGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TRMLQEQGRERVTGACAPWIQAD*DEGAEE
Trigger: TTCCTCGGCCCCTTCATCCCAATCAGCTTGGATCCA...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATATGGATCCAAGCTGATTaGGATGAAGGGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIWIQAD*DEGAEE
Trigger: TTCCTCGGCCCCTTCATCCCAATCAGCTTGGATCCA...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACCAGGAGTCCGGAAGTaGAGTACCTATTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIPGVRK*STYSAL
Trigger: GAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGACCAGGAGTCCGGAAGTaGAGTATCCTGCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGPGVRK*SILLNS
Trigger: ACTATTGAGCAGGATACTCCACTTCCGGACTCCTGG...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
CDS-3UTR TCA 90 bp AAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KESKHKNVTRTGKRKGNRPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...CCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGCTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KESKHKNVTRTGKRKGNRLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...CCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAGGGTAACAGGAGCGTaGGCACCTGGGGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRRVTGA*APGDWD
Trigger: GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCT...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAAAGAGTCCTGCTCAATAGTCAGCTGCCGTCCATGATCCAGAGGAAAGAGATGTGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ERVLLNSQLPSMIQRKEMWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...CATCTCTTTCCTCTGGATCATGGACGGCAGCTGACTATTGAGCAGGACTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: MLQEQGRERVTGACAPGDVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: RMLQEQGRERVTGACAPGVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...CCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGGAAGTGGAGTATCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMGSGVS*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGATACTCCACTTCC...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAGGGTCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAGCAGGATCAAGGAACTaGCTAGGACCGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QGQVEKMEKESKHKNVTRAGSRN*LGPLPA
Trigger: AGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGC...TCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAGGGGGCTGGGTGGTCTaGCAGGATCAAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: KRWRRSQSTRMLQEQGREGGWVV*QDQGTG
Trigger: GCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCC...TTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGATCCGTAGGAGAGTCTaGCTGGACGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERIRRRV*LDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGACTCTCCTACGGAT...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300108.7
ENST00000458521.7
CDS-3UTR CCA 90 bp GATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTaGGCATTGGCAGTGTATTTC +
Preference number: 4 (lower is better)
Translates to: DERRGMCTNTRASKCLCVWPTVC*ALAVYF
Trigger: GAAATACACTGCCAATGCCCAGCACACTGTCGGCCA...AACACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATAAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VGHYRNSRVFYSQCPLGLKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...CAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DGEGVKAQECYKNREEKGCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: CPLGLGIFTMQFPHQGQVTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...TACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAGGGAAGACTTTCCTGTaGATCCAAGCTGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVEGKTFL*IQADWD
Trigger: ATCCCAATCAGCTTGGATCCACAGGAAAGTCTTCCC...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGCCAGGAGTCCGGAAGTaGAGTACCTATTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGPGVRK*STYSAL
Trigger: GAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGG...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACCAGGAGTCCGGAAGTaGAGTATCCTGCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIPGVRK*SILLNS
Trigger: ACTATTGAGCAGGATACTCCACTTCCGGACTCCTGG...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
CDS-3UTR TCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGCCTGGCTCAGGGCTTTaGGCAATCCCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RKDGEGVKAQECYKNREEPGSGL*AIPPEM
Trigger: CATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGG...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAATTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVEFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGCACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACCACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACACTCACACACTGGTGCTaGCGGTGCTCCTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTLTHWC*RCSCKE
Trigger: CTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAG...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GTCCTGCTCAATAGTCAGCTGCCGTCCATGATCCAGAGGAAAGAGATGAAAGACGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: VLLNSQLPSMIQRKEMKDVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...GTCTTTCATCTCTTTCCTCTGGATCATGGACGGCAGCTGACTATTGAGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AGTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTTCTTATAAAGGTCTCTaGTCCTCTGTTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SQCPLGLGIFTMQFPHQGSYKGL*SSVPRE
Trigger: TTCCCTGGGAACAGAGGAGCAGAGACCTTTATAAGA...ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR GCA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGTCTTATAAAGGTCTCTaGTCCTCTGTTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWSYKGL*SSVPRE
Trigger: TTCCCTGGGAACAGAGGAGCAGAGACCTTTATAAGA...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCAAGGAGCGTGCGCACCTaGGGATTGGGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPRSVRT*GLGQGK
Trigger: CTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCT...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGNAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAAAGAGTCCTGCTCAATAGTCAGCTGCCGTCCATGATCCAGAGGAAAGAGATGACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: ERVLLNSQLPSMIQRKEMTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...CATCTCTTTCCTCTGGATCATGGACGGCAGCTGACTATTGAGCAGGACTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp TGGGAATGCTCCCTCAATGGTAAGATTATGAAAGCTGCAATTATGGGTCCCTCTGAGATGAGTGGCTTTTaGAGAGTCTCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WECSLNGKIMKAAIMGPSEMSGF*RVSGAA
Trigger: AGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTC...AGAGGGACCCATAATTGCAGCTTTCATAATCTTACCATTGAGGGAGCATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGCAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATATTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HYRNSRVFYSQCPLGLGIFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...TATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RWRRSQSTRMLQEQGRERLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...CCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCACTCTCGGGGGATACTTaGGGATGCCAAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPLSGDT*GCQSWG
Trigger: TCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAG...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTGGAGTAAGTTTCACATaGATGAAATCAGATGACACA +
Preference number: 4 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCGVSFT*MKSDDT
Trigger: TGTGTCATCTGATTTCATTCATGTGAAACTTACTCC...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGACACTGGTGCTGCCGGTaGTCCTGCAAAGAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRHWCCR*SCKERN
Trigger: GTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTG...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp CACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTTTAATACCCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: HKNVTRTGKRKGNRSVRTFNTLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAA...GGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGCCTTATGTCCTATTCTaGCTGACACCTAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMPYVLF*LTPNRL
Trigger: CAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGG...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTTTGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DERRGMCTNTRASKCLCVWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...AACACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGTGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: EMKDGGCVQTHVPLSVFVVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...CACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGGAGTACCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSVEYLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGTACTCCAC...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCVPGAG*SGRIKE
Trigger: TTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCAC...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAACCACCTCCTCCTGTaGCTCCTTACAGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: KRWRRSQSTRMLQEQGRENHLLL*LLTDSP
Trigger: GGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTT...TTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGCCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGEGVKAQECYKNREEKGPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...CCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGTGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACATGCGCACCTGGGGATTaGGACAGGGAAAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTCAPGD*DRERGL
Trigger: AAGACCTCTTTCCCTGTCCCAATCCCCAGGTGCGCA...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
3UTR CAA 72 bp AACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTaGGGGATATTCACTATGCAGTTTCCACACCAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRVFYSQCPLG*GIFTMQFPHQG
Trigger: ACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACGAGATGAGTGGCTTTTaGAGAGTCTCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNEMSGF*RVSGAA
Trigger: AGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTC...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAATTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IGVGDIHYAVSTPGSGRKFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...TTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GCTTTAATACCCTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGTTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 4 (lower is better)
Translates to: ALIPYSALGGYLRMPKLGFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393867.5
ENST00000438756.5
CDS-3UTR TCA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGCACAATGATCTGTGTTaGTCCATCTCATCTAATCTT +
Preference number: 4 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGHNDLC*SISSNL
Trigger: AAGATTAGATGAGATGGATCAACACAGATCATTGTG...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp GTCAATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCCACAATGATCTGTGTTaGTCCATCTCATCTAATCTT +
Preference number: 4 (lower is better)
Translates to: VNAHWGWGYSLCSFHTRVHNDLC*SISSNL
Trigger: AAGATTAGATGAGATGGATCAACACAGATCATTGTG...GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAAATCAGATGACACAATaGTCTGTGTTGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGNQMTQ*SVLIHL
Trigger: GAGATGGATCAACACAGATCATTGTGTCATCTGATT...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp GCTTTAATACCCTATTCTGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGGGAGTAAGTTTCACATaGATGAAATCAGATGACACA +
Preference number: 4 (lower is better)
Translates to: ALIPYSALGGYLRMPKLGGVSFT*MKSDDT
Trigger: TGTGTCATCTGATTTCATTCATGTGAAACTTACTCC...CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000393867.5
CDS-3UTR GCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTTGCTGCCGGTGCTCCTaGAAAGAGAGAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: DPSHLIFKCQLPETLCPICCRCS*KERNRV
Trigger: CACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCA...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCTTTAATACCCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRFNTLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAA...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp TCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SGRKDGEGVKAQECYKNRVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...CCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGCCTTATGTCCTATTCTaGCTGACACCTAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGPYVLF*LTPNRL
Trigger: CAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGG...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGCCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACCCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAACCAGGAGTCCGGAAGTaGAGTAAGTTTCACATGAAT +
Preference number: 4 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGEPGVRK*SKFHMN
Trigger: ATTCATGTGAAACTTACTCCACTTCCGGACTCCTGG...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMENAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCAGTCTTTCCCTCTGGCTaGACGCTCCTCTTGCCCATA +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPVFPSG*TLLLPI
Trigger: TATGGGCAAGAGGAGCGTCCAGCCAGAGGGAAAGAC...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
3UTR CAA 72 bp TACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATaGGGGTTGGGGATATTCACTATGCAGTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: YRNSRVFYSQCP*GLGIFTMQFPH
Trigger: GTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCACTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCAATCAGATGACACAATaGTCTGTGTTGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: KHKNVTRTGKRKGNRSVRNQMTQ*SVLIHL
Trigger: GAGATGGATCAACACAGATCATTGTGTCATCTGATT...GCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp TCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGGAAGTGGAGTATCCTaGTCAATAGTCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SGRKDGEGVKAQECYKNRGSGVS*SIVSCR
Trigger: ACGGCAGCTGACTATTGAGCAGGATACTCCACTTCC...CCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACCAGCTGGTAGAGATCTaGATCCCTCTTGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYQLVEI*IPLAAA
Trigger: GGCCGCAGCAAGAGGGATCCAGATCTCTACCAGCTG...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: RKDGEGVKAQECYKNREEQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGCAGTGTGCTGGGCATTaGCAGTGTATTTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKQCAGH*QCISGQ
Trigger: TTGCCCTGAAATACACTGCCAATGCCCAGCACACTG...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGTGTCTTTGTGTTTaGCCGACAGTGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRKCLCV*PTVCWA
Trigger: TGCCCAGCACACTGTCGGCCAAACACAAAGACACTT...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CCA 90 bp GATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAAGGAAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: DIHYAVSTPGSGRKDGEGNAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...TCCTTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGACAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCATTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 4 (lower is better)
Translates to: STRMLQEQGRERVTGACAFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...TGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR TCA 90 bp GATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGTTAATCAGATGACACAATaGTCTGTGTTGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: DERRGMCTNTRASKCLCVNQMTQ*SVLIHL
Trigger: GAGATGGATCAACACAGATCATTGTGTCATCTGATT...AACACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGACCCACAAAGAAGTCATaGATGTCACGTTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRPTKKS*MSRFSG
Trigger: TCCCGAGAAACGTGACATGCATGACTTCTTTGTGGG...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGATGGGGATATTCACTATaGAGTTTCCACACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EKMEKESKHKNVTRTGKRWGYSL*SFHTRV
Trigger: GACCCTGGTGTGGAAACTGCATAGTGAATATCCCCA...TCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACTCTTATAAAGGTCTCTaGTCCTCTGTTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNSYKGL*SSVPRE
Trigger: TTCCCTGGGAACAGAGGAGCAGAGACCTTTATAAGA...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCACCCTCCAGAGATGAGTaGCTTTTGAAGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPPSRDE*LLKSLW
Trigger: CCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGG...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTCCAGGAGTCCGGAAGTaGAGTAAGTTTCACATGAAT +
Preference number: 4 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGPGVRK*SKFHMN
Trigger: ATTCATGTGAAACTTACTCCACTTCCGGACTCCTGG...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGACAGTCAATGCCCATTaGGGTTGGGGATATTCACTA +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGTVNAH*GWGYSL
Trigger: TAGTGAATATCCCCAACCCCAATGGGCATTGACTGT...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCAAAGAGAGAAACCGAGTaGAGGGGATCTAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPKRETE*RGSRKA
Trigger: AGCCTTCCTAGATCCCCTCCACTCGGTTTCTCTCTT...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357616.7
ENST00000458521.7
CDS-3UTR TCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCACAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp AGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACATTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RRSQSTRMLQEQGRERVTFLGRC*FLRICA
Trigger: AGCACAGATCCTAAGGAATCAACATCTCCCGAGAAA...TGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCLGTFS*FTSVGE
Trigger: CTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAG...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp ATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCAATGTCCTATTCTGCCTaGCACCTAACAGGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: IFNVGHYRNSRVFYSQCPMSYSA*HLTGWE
Trigger: TTCCCAACCTGTTAGGTGTCAGGCAGAATAGGACAT...TGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTATGTCCTATTCTGCCTaGCACCTAACAGGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: DPSHLIFKCQLPETLCPIMSYSA*HLTGWE
Trigger: TTCCCAACCTGTTAGGTGTCAGGCAGAATAGGACAT...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp ATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGGAGTAAGTTTCACATaGATGAAATCAGATGACACA +
Preference number: 4 (lower is better)
Translates to: IGVGDIHYAVSTPGSGRKGVSFT*MKSDDT
Trigger: TGTGTCATCTGATTTCATTCATGTGAAACTTACTCC...TTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGTTTAATACCCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGFNTLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAA...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACGTTTGGCCGACAGTGTaGTGGGCATTGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYVWPTV*WALAVY
Trigger: ATACACTGCCAATGCCCAGCACACTGTCGGCCAAAC...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR GCA 90 bp TCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGCCTTATGTCCTATTCTaGCTGACACCTAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGRKDGEGVKAQECYKNRPYVLF*LTPNRL
Trigger: CAACCTGTTAGGTGTCAGGCAGAATAGGACATAAGG...CCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CCA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAATGCCCATTGGGGTTaGGGATATTCACTATGCAGT +
Preference number: 4 (lower is better)
Translates to: RKDGEGVKAQECYKNREENAHWG*GYSLCS
Trigger: ACTGCATAGTGAATATCCCCAACCCCAATGGGCATT...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR TCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCGAGATGAGTGGCTTTTaGAGAGTCTCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCEMSGF*RVSGAA
Trigger: AGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTC...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR GCA 90 bp AAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAGTATTCTACAGTCAATaGCCATTGGGGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: KRWRRSQSTRMLQEQGREVFYSQ*PLGLGI
Trigger: TATCCCCAACCCCAATGGGCATTGACTGTAGAATAC...TTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTCCAGGAGTCCGGAAGTaGAGTAAGTTTCACATGAAT +
Preference number: 4 (lower is better)
Translates to: DPSHLIFKCQLPETLCPIPGVRK*SKFHMN
Trigger: ATTCATGTGAAACTTACTCCACTTCCGGACTCCTGG...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR TCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCQSLQR*VAFEES
Trigger: AGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTG...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CCA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACGGGAAGACTTTCCTGTaGATCCAAGCTGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYGKTFL*IQADWD
Trigger: ATCCCAATCAGCTTGGATCCACAGGAAAGTCTTCCC...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR TCA 90 bp GATCCATCTCATCTAATCTTTAAATGCCAGCTCCCAGAAACCTTATGTCCTATTTTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 4 (lower is better)
Translates to: DPSHLIFKCQLPETLCPIFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...AATAGGACATAAGGTTTCTGGGAGCTGGCATTTAAAGATTAGATGAGATGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR GCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCTTTAATACCCTATTCTaGTCTCGGGGGATACTTGAG +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCFNTLF*SRGILE
Trigger: CTCAAGTATCCCCCGAGAGCAGAATAGGGTATTAAA...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR TCA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACTTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 4 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR TCA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCTTCAGGGCAAATCTATaGGCTTTAATACCCTATTCT +
Preference number: 4 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCFRANL*ALIPYS
Trigger: AGAATAGGGTATTAAAGCTCATAGATTTGCCCTGAA...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS GCA 90 bp GCTGGGTGGTCTGGCAGGATCAAGGAACTGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTGCTGCCGGTGCTCCTGCAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: AGWSGRIKELARTAA*SPHTLVLPVLLQRE
Trigger: CTCTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGCCAGACCACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS CCA 90 bp GGATCAAGGAACTGGCTAGGACCGCTGCCTGCTCCCCTCACACACTaGTGCTGCCGGTGCTCCTGCAAAGAGAGAAACCGAGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GSRNWLGPLPAPLTH*CCRCSCKERNRVEG
Trigger: CCCCTCCACTCGGTTTCTCTCTTTGCAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS-3UTR CAA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: EQGRERVTGACAPGDWDRAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QEQGRERVTGACAPGDWDALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS TCA 90 bp GCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTCTGGCTGGACGCTCCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ALGGYLRMPKLGTFS*FTSVGESGWTLLLP
Trigger: GGGCAAGAGGAGCGTCCAGCCAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000415231.1
ENST00000458521.7
CDS-3UTR CAA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGATCTGGATCCCTCTaGCTGCGGCCCCCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGRSGSL*LRPPPG
Trigger: TCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCT...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QEQGRERVTGACAPGDWDAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...GTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS TCA 90 bp GGAACCACCTCCTCCTGTGGCTCCTTACAGACAGCCCCAAAGCTCTaGGCTAGGCTGAAGGCCAGGATGGCTGTGAATAGCAGCATGATC +
Preference number: 5 (lower is better)
Translates to: GTTSSCGSLQTAPKL*ARLKARMAVNSSMI
Trigger: GATCATGCTGCTATTCACAGCCATCCTGGCCTTCAGCCTAGCTCAGAGCTTTGGGGCTGTCTGTAAGGAGCCACAGGAGGAGGTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000415231.1
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS-3UTR CAA 90 bp TTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LQEQGRERVTGACAPGDWALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...CCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: GRERVTGACAPGDWDRERAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS CCA 90 bp GCTCCTCTGTTCCCAGGGAAGACTTTCCTGTGGATCCAAGCTGATTaGGATGAAGGGGCCGAGGAACCCTCACTGAAGGTAAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: APLFPGKTFLWIQAD*DEGAEEPSLKVRKV
Trigger: GACCTTTCTTACCTTCAGTGAGGGTTCCTCGGCCCCTTCATCCCAATCAGCTTGGATCCACAGGAAAGTCTTCCCTGGGAACAGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CAA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAAAGATCTGGATCCCTCTaGCTGCGGCCCCCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGERSGSL*LRPPPG
Trigger: TCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCT...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGAGATCTGGATCCCTCTaGCTGCGGCCCCCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGRSGSL*LRPPPG
Trigger: TCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCT...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGGAAAGAAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRERVTGACAPGDWDRERRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...TCTTTCCCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: RMLQEQGRERVTGACAPGAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...CCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGGWTLL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCC...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGGWTLL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCC...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGGGACAGGTACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: EQGRERVTGACAPGDWDRYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...CCTGTCCCAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGAGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGGWTLL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCC...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS TCA 90 bp GCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTGTTTCTCGGGAGATGTTGATTCC +
Preference number: 5 (lower is better)
Translates to: ALGGYLRMPKLGTFS*FTSVGECFSGDVDS
Trigger: GGAATCAACATCTCCCGAGAAACACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379411.6
ENST00000423597.5
ENST00000441881.5
CDS-3UTR CAA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAGATCTGGATCCCTCTaGCTGCGGCCCCCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGRSGSL*LRPPPG
Trigger: TCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCT...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CTAATGCAGTCCAGGAGTCCGGAAGTGGAGTACCTATTCTGCTCTCGGGGGATAAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LMQSRSPEVEYLFCSRGIRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...TATCCCCCGAGAGCAGAATAGGTACTCCACTTCCGGACTCCTGGACTGCATTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357616.7
CDS-3UTR CAA 90 bp GAGATGAAAGACGGGGGATGTGTACAAACACACGTGCCTCTAAGTGTCTTTGTGGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: EMKDGGCVQTHVPLSVFVAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...CACAAAGACACTTAGAGGCACGTGTGTTTGTACACATCCCCCGTCTTTCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CAA 90 bp CCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: PIGVGDIHYAVSTPGSGRAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...TCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: RMLQEQGRERVTGACAPGAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...CCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGCTGACACCTAACAGGTaGGGAATGCTCCCTCAATGG +
Preference number: 5 (lower is better)
Translates to: GHYRNSRVFYSQCPLGLGLTPNR*GMLPQW
Trigger: CCATTGAGGGAGCATTCCCAACCTGTTAGGTGTCAG...CCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CAA 90 bp ATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATCTGACACCTAACAGGTaGGGAATGCTCCCTCAATGG +
Preference number: 5 (lower is better)
Translates to: MLQEQGRERVTGACAPGDLTPNR*GMLPQW
Trigger: CCATTGAGGGAGCATTCCCAACCTGTTAGGTGTCAG...ATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CAA 90 bp GTGCCTCTAAGTGTCTTTGTGTTTGGCCGACAGTGTGCTGGGCATTGGCAGTGTCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: VPLSVFVFGRQCAGHWQCQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...ACACTGCCAATGCCCAGCACACTGTCGGCCAAACACAAAGACACTTAGAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
CDS-3UTR CAA 90 bp GTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATTGCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: VTRTGKRKGNRSVRTWGLQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...CAATCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS TCA 90 bp GCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTCTTATAAAGGTCTCTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALGGYLRMPKLGTFS*FTSVGESYKGLCSS
Trigger: AGAGGAGCAGAGACCTTTATAAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS-3UTR CAA 90 bp ATGCCCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MPIGVGDIHYAVSTPGSGRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...ACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: NVGHYRNSRVFYSQCPLGAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...CCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAAAGAGTCCTGCTCAATAGTCAGCTGCCGTCCATGATCCAGAGGAAAGAGATGGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: ERVLLNSQLPSMIQRKEMAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...CATCTCTTTCCTCTGGATCATGGACGGCAGCTGACTATTGAGCAGGACTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000379411.6
ENST00000393867.5
CDS-3UTR CAA 90 bp AAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: KNVTRTGKRKGNRSVRTWAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...CCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAAGGAGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DIHYAVSTPGSGRKDGEGALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...TCCTTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGACAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CCATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PLGLGIFTMQFPHQGQVERDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...TTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TGGGAATGCTCCCTCAATGGTAAGATTATGAAAGCTGCAATTATGGGTCCCTCTGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: WECSLNGKIMKAAIMGPSGWTLL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCC...AGAGGGACCCATAATTGCAGCTTTCATAATCTTACCATTGAGGGAGCATTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300108.7
ENST00000393867.5
CDS-3UTR CAA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: EKESKHKNVTRTGKRKGNALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...GTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTGGGGATACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: NVTRTGKRKGNRSVRTWGYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...TCCCCAGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLGIFTMQFPHQGQVEKMRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...CATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FNVGHYRNSRVFYSQCPLALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...CAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp ACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCGTGCGCACCTCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: TRMLQEQGRERVTGACAPQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...AGGTGCGCACGCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCCCATTGGGGTTGGGGATACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: DTTGTLGYSTVNAHWGWGYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...TCCCCAACCCCAATGGGCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGATCTGGATCCCTCTaGCTGCGGCCCCCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYRSGSL*LRPPPG
Trigger: TCCTGGCGGGGGCCGCAGCAAGAGGGATCCAGATCT...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGAAAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GDIHYAVSTPGSGRKDGERDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...TTCTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKGWTLL*PISPTK
Trigger: CTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCC...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp ATTGGGGTTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAACAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: IGVGDIHYAVSTPGSGRKQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...TTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAACCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KRWRRSQSTRMLQEQGREAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...TTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TTGGGGATATTCACTATGCAGTTTCCACACCAGGGTCAGGTAGAAAAGATGGAGTACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: LGIFTMQFPHQGQVEKMEYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...CTCCATCTTTTCTACCTGACCCTGGTGTGGAAACTGCATAGTGAATATCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp ATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MEKESKHKNVTRTGKRKGRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...ACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACAGTCAATGCGCTCTCGGGGGATACTaGAGGATGCCAAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: YIFNVGHYRNSRVFYSQCALGGY*RMPKLG
Trigger: CCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGC...GCATTGACTGTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp CAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: QVEKMEKESKHKNVTRTGQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...CCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGGGTAACAGGAGCTACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: ESKHKNVTRTGKRKGNRSYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...GCTCCTGTTACCCTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGAAAGAGAGATGAGTGGCTTTaGAAGAGTCTCTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: KMEKESKHKNVTRTGKRKRDEWL*KSLWSS
Trigger: GCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCT...CTTTCTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYAWLRA*SNPSRD
Trigger: ATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGC...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp TCAGGTAGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGCAATGCCCATTGGGGTaGGGGATATTCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: SGRKDGEGVKAQECYKNRQCPLG*GIFTMQ
Trigger: CTGCATAGTGAATATCCCCAACCCCAATGGGCATTG...CCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp AGAAAAGATGGAGAAGGAGTCAAAGCACAAGAATGTTACAAGAACAGGGAAGAGTACAGTCAATGCCCATaGGGGTTGGGGATATTCACT +
Preference number: 5 (lower is better)
Translates to: RKDGEGVKAQECYKNREEYSQCP*GLGIFT
Trigger: AGTGAATATCCCCAACCCCAATGGGCATTGACTGTA...CTCTTCCCTGTTCTTGTAACATTCTTGTGCTTTGACTCCTTCTCCATCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS-3UTR CAA 90 bp GAGAGACATTATATTTTTAATGTAGGACACTACAGGAACTCTAGGGTATTCTACGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: ERHYIFNVGHYRNSRVFYAGDVL*IHIRRR
Trigger: TCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGC...GTAGAATACCCTAGAGTTCCTGTAGTGTCCTACATTAAAAATATAATGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
CDS CCA 72 bp TGGTGCCTGTGGAGCAGCTCTGTGCCGGGGGCTGGGTaGTCTGGCAGGATCAAGGAACTGGCTAGGACCGCT +
Preference number: 6 (lower is better)
Translates to: WCLWSSSVPGAG*SGRIKELARTA
Trigger: AGCGGTCCTAGCCAGTTCCTTGATCCTGCCAGACCACCCAGCCCCCGGCACAGAGCTGCTCCACAGGCACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000415231.1
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS GCA 72 bp TCTGGCAGGATCAAGGAACTGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTGCTGCCGGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SGRIKELARTAA*SPHTLVLPVLL
Trigger: CAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS GCA 72 bp TCTGGCAGGATCAAGGAACTGGCTAGGACCGCTGCCTaGTCCCCTCACACACTGGTGCTGCCGGTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SGRIKELARTAA*SPHTLVLPVLL
Trigger: GAGGAGCACCGGCAGCACCAGTGTGTGAGGGGAGCAGGCAGCGGTCCTAGCCAGTTCCTTGATCCTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415231.1
CDS CAA 90 bp TGCTCTCGGGGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGAGTCTGGCTGGACGCTCCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: CSRGILEDAKAGDVL*IHIRRRVWLDAPLA
Trigger: GGCAAGAGGAGCGTCCAGCCAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCCCCGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000415231.1
ENST00000458521.7
CDS TCA 72 bp TCCTCCTGTGGCTCCTTACAGACAGCCCCAAAGCTCTaGGCTAGGCTGAAGGCCAGGATGGCTGTGAATAGC +
Preference number: 6 (lower is better)
Translates to: SSCGSLQTAPKL*ARLKARMAVNS
Trigger: GCTATTCACAGCCATCCTGGCCTTCAGCCTAGCTCAGAGCTTTGGGGCTGTCTGTAAGGAGCCACAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000415231.1
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS TCA 72 bp AGCCTGGCTCAGGGCTTTGAGCAATCCCTCCAGAGATaGGTGGCTTTTGAAGAGTCTCTGGAGCAGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SLAQGFEQSLQR*VAFEESLEQLV
Trigger: TACCAGCTGCTCCAGAGACTCTTCAAAAGCCACTCATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000415231.1
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS TCA 72 bp GGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTCTGGCTGGACGCTC +
Preference number: 6 (lower is better)
Translates to: GYLRMPKLGTFS*FTSVGESGWTL
Trigger: GAGCGTCCAGCCAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000415231.1
ENST00000458521.7
CDS CCA 72 bp TTCCCAGGGAAGACTTTCCTGTGGATCCAAGCTGATTaGGATGAAGGGGCCGAGGAACCCTCACTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: FPGKTFLWIQAD*DEGAEEPSLKV
Trigger: TACCTTCAGTGAGGGTTCCTCGGCCCCTTCATCCCAATCAGCTTGGATCCACAGGAAAGTCTTCCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS CAA 72 bp GGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGAGTCTGGCTGGACGCT +
Preference number: 6 (lower is better)
Translates to: GILEDAKAGDVL*IHIRRRVWLDA
Trigger: AGCGTCCAGCCAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000415231.1
ENST00000458521.7
CDS TCA 72 bp AGGGAGAAGAGGGTACTTACGTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCTAGCCTGGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: REKRVLTFLGRC*FLRICASLAQG
Trigger: GCCCTGAGCCAGGCTAGCACAGATCCTAAGGAATCAACATCTCCCGAGAAACGTAAGTACCCTCTTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496757.1
CDS TCA 72 bp GTTCTGGATGGCCTCTCCCTTTCAGGAAAGGTTGGCTaGGCAGTGGGAGCTGGCATATTGTTTGTACCAGGT +
Preference number: 6 (lower is better)
Translates to: VLDGLSLSGKVG*AVGAGILFVPG
Trigger: ACCTGGTACAAACAATATGCCAGCTCCCACTGCTCAGCCAACCTTTCCTGAAAGGGAGAGGCCATCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496757.1
CDS CCA 72 bp ATGGCCTCTCCCTTTCAGGAAAGGTTGGCTGAGCAGTaGGAGCTGGCATATTGTTTGTACCAGGTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: MASPFQERLAEQ*ELAYCLYQVRR
Trigger: CCTTCTCACCTGGTACAAACAATATGCCAGCTCCCACTGCTCAGCCAACCTTTCCTGAAAGGGAGAGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496757.1
CDS TCA 72 bp ATTCACATCCGTAGGAGAGTGTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCTAGCCTGGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: IHIRRRVFLGRC*FLRICASLAQG
Trigger: GCCCTGAGCCAGGCTAGCACAGATCCTAAGGAATCAACATCTCCCGAGAAACACTCTCCTACGGATGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379411.6
ENST00000423597.5
ENST00000441881.5
CDS CAA 72 bp GATTCCTTAGGATCTGTGCTAGCCTGGCTCAGGGCTTaGAGCAATCCCTCCAGAGATGAGTGGCTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: DSLGSVLAWLRA*SNPSRDEWLLK
Trigger: CTTCAAAAGCCACTCATCTCTGGAGGGATTGCTCAAAGCCCTGAGCCAGGCTAGCACAGATCCTAAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000379411.6
ENST00000393867.5
ENST00000415231.1
ENST00000423597.5
ENST00000438756.5
ENST00000441881.5
ENST00000458521.7
ENST00000496757.1
CDS CAA 72 bp TTCACATCCGTAGGAGAGTCTGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAGAAGTCATGCATGTCA +
Preference number: 6 (lower is better)
Translates to: FTSVGESGWTLL*PISPTKKSCMS
Trigger: TGACATGCATGACTTCTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCCAGACTCTCCTACGGATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300108.7
ENST00000415231.1
ENST00000458521.7
CDS CAA 72 bp AAAGGTCCTGTCTTTCCCTCTGGCTGGACGCTCCTCTaGCCCATAAGTCCCACAAAGAAGTCATGCATGTCA +
Preference number: 6 (lower is better)
Translates to: KGPVFPSGWTLL*PISPTKKSCMS
Trigger: TGACATGCATGACTTCTTTGTGGGACTTATGGGCAAGAGGAGCGTCCAGCCAGAGGGAAAGACAGGACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5
CDS CAA 72 bp GGGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTaGATTCACATCCGTAGGAGAGTGTTTCTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: GILEDAKAGDVL*IHIRRRVFLGR
Trigger: TCTCCCGAGAAACACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379411.6
ENST00000423597.5
ENST00000441881.5
CDS TCA 72 bp AAAGAAGTCATGCATGTCACGTTTCTCGGGAGATGTTaGTTCCTTAGGATCTGTGCTAGCCTGGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: KEVMHVTFLGRC*FLRICASLAQG
Trigger: GCCCTGAGCCAGGCTAGCACAGATCCTAAGGAATCAACATCTCCCGAGAAACGTGACATGCATGACTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300108.7
ENST00000357616.7
ENST00000393867.5
ENST00000415231.1
ENST00000438756.5
ENST00000458521.7
CDS TCA 72 bp GGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTGTTTCTCGGGAGAT +
Preference number: 6 (lower is better)
Translates to: GYLRMPKLGTFS*FTSVGECFSGD
Trigger: ATCTCCCGAGAAACACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379411.6
ENST00000423597.5
ENST00000441881.5
CDS TCA 72 bp GGATACTTGAGGATGCCAAAGCTGGGGACGTTCTCTTaGTTCACATCCGTAGGAGAGTCTTATAAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: GYLRMPKLGTFS*FTSVGESYKGL
Trigger: GAGACCTTTATAAGACTCTCCTACGGATGTGAATCAAGAGAACGTCCCCAGCTTTGGCATCCTCAAGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357616.7
ENST00000393867.5
ENST00000438756.5