RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SZT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198198

Ensembl transcript IDs: ENST00000357658.4, ENST00000372450.8, ENST00000406439.7, ENST00000460536.1, ENST00000470139.1, ENST00000470897.2, ENST00000471177.1, ENST00000478140.1, ENST00000562955.2, ENST00000634258.3, ENST00000638263.1, ENST00000638631.1, ENST00000638642.1, ENST00000638769.1, ENST00000639197.1, ENST00000639852.1, ENST00000640484.1, ENST00000648058.1, ENST00000649403.1

Found 2314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCGGGCCGCGGGCAGCTCGGGCTTCGAGGCCGTCGAGGTGGCCTaGCCGTACGCGGAGACGCCTGAGGCGCTGGCGCGCGCCGCGCGA +
Preference number: 1 (lower is better)
Translates to: VRAAGSSGFEAVEVA*PYAETPEALARAAR
Trigger: TCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGCTGCCCGCGGCCCGCAC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp AGGCGCTGGCGCGCGCCGCGCGAGAAGCGGGGCTGCGGCTTGTACTaGTCAACACGCCCCCGGGTGCGTCGCGGGCCGGGAGGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: RRWRAPREKRGCGLY*STRPRVRRGPGGLG
Trigger: TCCCAGCCCTCCCGGCCCGCGACGCACCCGGGGGCGTGTTGATCAGTACAAGCCGCAGCCCCGCTTCTCGCGCGGCGCGCGCCAGCGCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp GGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTaGGGCGCTGGCGCGCGCCGCGCGAGAAGCGGGGCTGCGGCTTGT +
Preference number: 1 (lower is better)
Translates to: GLRGRRGGLAVRGDA*GAGARRARSGAAAC
Trigger: ACAAGCCGCAGCCCCGCTTCTCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp CAGGCCCTGGAGCTCGGCCTCCCTACCTTCTCCAGGCGCGGGTCCTaGTCCTTTTCCGGCCGCCCTCGCTCCGCCCCTTCGCCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: QALELGLPTFSRRGS*SFSGRPRSAPSPLP
Trigger: GGGGAGAGGCGAAGGGGCGGAGCGAGGGCGGCCGGAAAAGGAGCAGGACCCGCGCCTGGAGAAGGTAGGGAGGCCGAGCTCCAGGGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GGCTGGGGGCCGTCCCCGGGAGACAGGCGGCCTTCCGAGAGGGACTaGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: GWGPSPGDRRPSERD*SRPCGMPKPWAVPG
Trigger: ACCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCTCCCGGGGACGGCCCCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp GCGTCCCATCATTGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTaGTTCGCGTCCGGCTCTCAGGCCCTGGAGCTCGGCCTCCCTACC +
Preference number: 1 (lower is better)
Translates to: ASHHCNRALGQPALS*FASGSQALELGLPT
Trigger: GGTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGATGGGACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp TCGGGCAGCCAGCTCTCTCTTGCTTCGCGTCCGGCTCTCAGGCCCTaGAGCTCGGCCTCCCTACCTTCTCCAGGCGCGGGTCCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: SGSQLSLASRPALRP*SSASLPSPGAGPAP
Trigger: AGGAGCAGGACCCGCGCCTGGAGAAGGTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp CCTGTGGCCTGGGTGCTGCCGACTGCTTGCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCCTCGGCACCTGGAACGTGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: PVAWVLPTACSFGIP*TPSSGPSAPGTWQV
Trigger: GACCTGCCACGTTCCAGGTGCCGAGGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp GGAGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTaGCCCCCAGTACTTCCTGGACACGCCCCAGCAGGGTACGACCCC +
Preference number: 1 (lower is better)
Translates to: GGPRGTAGAHQHPHH*PPVLPGHAPAGYDP
Trigger: GGGGTCGTACCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GGCTTCGTGGGCTGTGAGTATCAGCCTCGAGGTGAGGCGTGGCCCTaGGGAAGGGAGCTCTGGAGGGACCCGGACAGGGGCTGTTTTCTC +
Preference number: 1 (lower is better)
Translates to: GFVGCEYQPRGEAWP*GRELWRDPDRGCFL
Trigger: GAGAAAACAGCCCCTGTCCGGGTCCCTCCAGAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATACTCACAGCCCACGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GAAGGGAGCTCTGGAGGGACCCGGACAGGGGCTGTTTTCTCCTTGTaGGCTGAGGTGCCGAGGCCTCCCTCTCCCTGCAGGAGACACAGT +
Preference number: 1 (lower is better)
Translates to: EGSSGGTRTGAVFSL*AEVPRPPSPCRRHS
Trigger: ACTGTGTCTCCTGCAGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGCCCCTGTCCGGGTCCCTCCAGAGCTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp TTTCTTGGCTGGGAGCCATGGCCCGGCGAGGACTTAGGTCAACACTaGAGGCACTCACCGGAAGATGAGGTCTCGGGGCGCCTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: FLGWEPWPGEDLGQH*RHSPEDEVSGRLRG
Trigger: CCCCCTCAGGCGCCCCGAGACCTCATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTCCTCGCCGGGCCATGGCTCCCAGCCAAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp GAAAGTGCTGGGATACCTGGGCATCGTGACCCAGGTGCCATGGACTaGAGACCTGGGGAGACGGACGAGGGCTGGCACAGTCAGGGAATC +
Preference number: 1 (lower is better)
Translates to: ESAGIPGHRDPGAMD*RPGETDEGWHSQGI
Trigger: GATTCCCTGACTGTGCCAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCACGATGCCCAGGTATCCCAGCACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp TCTCTGAAAGTGCTGGGATACCTGGGCATCGTGACCCAGGTGCCATaGACTGGAGACCTGGGGAGACGGACGAGGGCTGGCACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: SLKVLGYLGIVTQVP*TGDLGRRTRAGTVR
Trigger: CCTGACTGTGCCAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCACGATGCCCAGGTATCCCAGCACTTTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp GCCCGGCGAGGACTTAGGTCAACACTGAAGGCACTCACCGGAAGATaGGGTCTCGGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTT +
Preference number: 1 (lower is better)
Translates to: ARRGLRSTLKALTGR*GLGAPEGAACQPFV
Trigger: AACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCCGAGACCTCATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTCCTCGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp CTCCATGCTGCTGCTGAAGGGCCCAGGGCTGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAG +
Preference number: 1 (lower is better)
Translates to: LHAAAEGPRAERTRT*GCMRQTPSVATQCK
Trigger: CTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTCAGCCCTGGGCCCTTCAGCAGCAGCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp CTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGACAGGACACCGGGTCCGGGGCCCATC +
Preference number: 1 (lower is better)
Translates to: LRGLHANHLFPQRFQ*TAVDVDRTPGPGPI
Trigger: GATGGGCCCCGGACCCGGTGTCCTGTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp CTGCTGAAGGGCCCAGGGCTGAGAGGACCAGGACTTGGGGGTGCATaGGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGG +
Preference number: 1 (lower is better)
Translates to: LLKGPGLRGPGLGGA*GKPQVWPHNARRNG
Trigger: CCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTCAGCCCTGGGCCCTTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 90 bp GCTGCTGCTGAAGGGCCCAGGGCTGAGAGGACCAGGACTTGGGGGTaGATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: AAAEGPRAERTRTWG*MRQTPSVATQCKEK
Trigger: TTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTCAGCCCTGGGCCCTTCAGCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 90 bp GCCTGGGAGGGAGACTGCTGCCTGTGCCAAATTGGTGAGGAAGGCTaGATGGGAGTCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: AWEGDCCLCQIGEEG*MGVREPATKHYCFS
Trigger: TGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCACCAATTTGGCACAGGCAGCAGTCTCCCTCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 90 bp TCCTGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTaGTGCCAGGCTGGGGCAGCAGACCCTCAAGACATAGTTACAAAG +
Preference number: 1 (lower is better)
Translates to: SWMGQWLWVFGEGGS*CQAGAADPQDIVTK
Trigger: CTTTGTAACTATGTCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp ACACACACGTACTTACATGTCTCTGTGGGTGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGTGAGGCTGCCAGCCTAGGTCAGAGG +
Preference number: 1 (lower is better)
Translates to: THTYLHVSVGVRRRG*TVGTAREAASLGQR
Trigger: CCTCTGACCTAGGCTGGCAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCACACCCACAGAGACATGTAAGTACGTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GGGAGGGAGACTGCTGCCTGTGCCAAATTGGTGAGGAAGGCTGCATaGGAGTCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: GRETAACAKLVRKAA*ESVSRRQSTTASQV
Trigger: CACCTGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCACCAATTTGGCACAGGCAGCAGTCTCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp AGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACCTCGTaGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGT +
Preference number: 1 (lower is better)
Translates to: RSSIHSTRHAARRTS*DCWSPSTPASLTPS
Trigger: ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TCTATTCACAGCACCCGACATGCTGCTAGGAGGACCTCGTGGGACTaGTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTACTTCC +
Preference number: 1 (lower is better)
Translates to: SIHSTRHAARRTSWD*WSPSTPASLTPSTS
Trigger: GGAAGTACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TTCCACCCGTGTTACTCGAGGGCCCTCAGGCTCCAGGGGCCAGGGTaGCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACAGCAG +
Preference number: 1 (lower is better)
Translates to: FHPCYSRALRLQGPG*HSHILNAHVVFPQQ
Trigger: CTGCTGTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAGCCTGAGGGCCCTCGAGTAACACGGGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR CCA 90 bp TCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTaGGGCAGCAGACCCTCAAGACATAGTTACAAAGCCTTTGGTGTC +
Preference number: 1 (lower is better)
Translates to: SVAVGVWGGRFLLPG*GSRPSRHSYKAFGV
Trigger: GACACCAAAGGCTTTGTAACTATGTCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp CCGAGGGAAGGAAAGGTTTTGGAAAGTACTGGAGGCAGGAGGCGGTaGGTGGACACTGAGATGTCTGGGAAAGGGCTTGCCCCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: PREGKVLESTGGRRR*VDTEMSGKGLAPQP
Trigger: TGGCTGAGGGGCAAGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp GCTGTTTTCTCCTTGTGGGCTGAGGTGCCGAGGCCTCCCTCTCCCTaGAGGAGACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTG +
Preference number: 1 (lower is better)
Translates to: AVFSLWAEVPRPPSP*RRHSRGLELATFIL
Trigger: CAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTCTCCTGCAGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GGGAAGGAAAGGTTTTGGAAAGTACTGGAGGCAGGAGGCGGTGGGTaGACACTGAGATGTCTGGGAAAGGGCTTGCCCCTCAGCCATCAC +
Preference number: 1 (lower is better)
Translates to: GKERFWKVLEAGGGG*TLRCLGKGLPLSHH
Trigger: GTGATGGCTGAGGGGCAAGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp AGGTTCAGGGAGTCGAGGACGCCAGATCTGAGACGCTCAGAAGTCTaGGCCCACTGGTTTATCTCTGCCTCTGCGGTCCTGGTCCTTTGT +
Preference number: 1 (lower is better)
Translates to: RFRESRTPDLRRSEV*AHWFISASAVLVLC
Trigger: ACAAAGGACCAGGACCGCAGAGGCAGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCGACTCCCTGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp ACCCATGACCCTGATGCAGGTTCAGGGAGTCGAGGACGCCAGATCTaGGACGCTCAGAAGTCTGAGCCCACTGGTTTATCTCTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: THDPDAGSGSRGRQI*DAQKSEPTGLSLPL
Trigger: CAGAGGCAGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCGACTCCCTGAACCTGCATCAGGGTCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp GAAACCCAGGGTCCGAGAGCAAAGGGACTTGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGGATTGGAACCCAGGTGTCATCTCGA +
Preference number: 1 (lower is better)
Translates to: ETQGPRAKGLDGGHK*FKGRAGIGTQVSSR
Trigger: TCGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGCTCTCGGACCCTGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp TGGGAACCTGACAGGAAACATCCGGGAGTTCCTGCCCATTGTTGGTaGGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCCCACATC +
Preference number: 1 (lower is better)
Translates to: WEPDRKHPGVPAHCW*EDLPLPSHPFNPHI
Trigger: GATGTGGGGATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCCGGATGTTTCCTGTCAGGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp TGCCAGCCTAGGTCAGAGGAACAGGTGAGGGCCTTGACCAGTGACTaGCTGATGGGGGACAAACTTGGGAAGGAGCTCTATTCACAGCAC +
Preference number: 1 (lower is better)
Translates to: CQPRSEEQVRALTSD*LMGDKLGKELYSQH
Trigger: GTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCCCCCATCAGTCAGTCACTGGTCAAGGCCCTCACCTGTTCCTCTGACCTAGGCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp TGGACACTGAGATGTCTGGGAAAGGGCTTGCCCCTCAGCCATCACTaGAGTGTCTCTGAAAGTGCTGGGATACCTGGGCATCGTGACCCA +
Preference number: 1 (lower is better)
Translates to: WTLRCLGKGLPLSHH*SVSESAGIPGHRDP
Trigger: TGGGTCACGATGCCCAGGTATCCCAGCACTTTCAGAGACACTTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGACATCTCAGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp AAAGGTTTTGGAAAGTACTGGAGGCAGGAGGCGGTGGGTGGACACTaGGATGTCTGGGAAAGGGCTTGCCCCTCAGCCATCACTGAAGTG +
Preference number: 1 (lower is better)
Translates to: KGFGKYWRQEAVGGH*DVWERACPSAITEV
Trigger: CACTTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCCAGTACTTTCCAAAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 90 bp GTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGGTCTGTCTGGTTGATGCTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: VLSGSVKCSGTEEKD*RWASIWSVWLMLCS
Trigger: GCTGCAGAGCATCAACCAGACAGACCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR TCA 90 bp CACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTaGGGAGAAGGACTGAAGGTGGGCAAGCATCTGGTCTGTCTGGTT +
Preference number: 1 (lower is better)
Translates to: HSALGAVRKREMLRH*GEGLKVGKHLVCLV
Trigger: AACCAGACAGACCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR TCA 90 bp GGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGGAGAAGGACTGAAGGTGGGCAAGCA +
Preference number: 1 (lower is better)
Translates to: GCRRVALRSWCCQEA*NAQALRRRTEGGQA
Trigger: TGCTTGCCCACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR GCA 90 bp TGGGCATTGCTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGTaGTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAG +
Preference number: 1 (lower is better)
Translates to: WALLDGQEVECSLQG*CGKRRPGVFGSVPE
Trigger: CTCAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TCAAGGAGTGGGCATTGCTTGATGGGCAGGAAGTTGAGTGTTCCTTaGAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCG +
Preference number: 1 (lower is better)
Translates to: SRSGHCLMGRKLSVP*KGAVARGGLVYLAA
Trigger: CGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp CCTATCTGTTTCAACTGCTGGAAGATGAAGGCTACAAAGGCTTCGTaGGCTGTGAGTATCAGCCTCGAGGTGAGGCGTGGCCCTGGGGAA +
Preference number: 1 (lower is better)
Translates to: PICFNCWKMKATKAS*AVSISLEVRRGPGE
Trigger: TTCCCCAGGGCCACGCCTCACCTCGAGGCTGATACTCACAGCCCACGAAGCCTTTGTAGCCTTCATCTTCCAGCAGTTGAAACAGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp CTTACAGAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTaGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGG +
Preference number: 1 (lower is better)
Translates to: LTEGRKTQPPITNGK*KGVLRRSEGGRGLR
Trigger: CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTCTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TATAATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTaGAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTGCTTCGCGTCC +
Preference number: 1 (lower is better)
Translates to: YNQRKDSVLKCASHH*NRALGQPALSCFAS
Trigger: GGACGCGAAGCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp TCTTGTAGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTaGGAGGTCACACTCTGTGCTTGCTGCAAGCTGCGGAATAGCCCA +
Preference number: 1 (lower is better)
Translates to: SCSSSSQASTAVSKS*EVTLCACCKLRNSP
Trigger: TGGGCTATTCCGCAGCTTGCAGCAAGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACTACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp CTCTTCCCTAGGACATATTCCACTGGCAGATCATGGATGGGAACCTaGCAGGAAACATCCGGGAGTTCCTGCCCATTGTTGGTGAGAGGA +
Preference number: 1 (lower is better)
Translates to: LFPRTYSTGRSWMGT*QETSGSSCPLLVRG
Trigger: TCCTCTCACCAACAATGGGCAGGAACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCCTAGGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GTCTGGTTGATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATaGGTACGATACAATGAACGAATGGGCTGCCTTAGTGCACAGGAC +
Preference number: 1 (lower is better)
Translates to: VWLMLCSVFQKRRIT*VRYNERMGCLSAQD
Trigger: GTCCTGTGCACTAAGGCAGCCCATTCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCATCAACCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR TCA 90 bp GAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTaGTGTCTATTTCTTGTAGTAGCTCCTCACAGGCATCTACCGCTG +
Preference number: 1 (lower is better)
Translates to: EANPKCGHTMQGEMG*CLFLVVAPHRHLPL
Trigger: CAGCGGTAGATGCCTGTGAGGAGCTACTACAAGAAATAGACATCACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp CACATAGTGTCTAACACTTCAGTTTCTCTGCTGCTTCCCTCCCATTaGGAAGCCAGTGCCAGGGTTGCTGTGAAGATGGGAGAGCTTCTG +
Preference number: 1 (lower is better)
Translates to: HIVSNTSVSLLLPSH*EASARVAVKMGELL
Trigger: CAGAAGCTCTCCCATCTTCACAGCAACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAGCAGAGAAACTGAAGTGTTAGACACTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TGCTTACAGGTAGTGATGCTTGGACTGTCTTCAAGGAGTGGGCATTaGTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGTGCTGTG +
Preference number: 1 (lower is better)
Translates to: CLQVVMLGLSSRSGH*LMGRKLSVPCKGAV
Trigger: CACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCACTACCTGTAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp GTAGTATCCTCTTCCCTAGGACATATTCCACTGGCAGATCATGGATaGGAACCTGACAGGAAACATCCGGGAGTTCCTGCCCATTGTTGG +
Preference number: 1 (lower is better)
Translates to: VVSSSLGHIPLADHG*EPDRKHPGVPAHCW
Trigger: CCAACAATGGGCAGGAACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCCTAGGGAAGAGGATACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp AGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGCAACTTACCTaGCCACGCCTATTAGTGTGTACTTATTTCTTGGCTGGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: REIKQGASRIWQQLT*PRLLVCTYFLAGSH
Trigger: ATGGCTCCCAGCCAAGAAATAAGTACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp ACTGCTTCTCAGGTGCTTAGATACTACCTTGCACAGTCATTCCCCTaGACTGGAAGGTCCTTGTTTATAGGGACTTGGTCTGTGTACCCC +
Preference number: 1 (lower is better)
Translates to: TASQVLRYYLAQSFP*TGRSLFIGTWSVYP
Trigger: GGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAGCACCTGAGAAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 90 bp CACCCACGTGCCTCCAGACAGCGAGTGACATCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTGAACATTGTCATATGTCTCTGTAAT +
Preference number: 1 (lower is better)
Translates to: HPRASRQRVTSHLLL*IKDDLLNIVICLCN
Trigger: ATTACAGAGACATATGACAATGTTCAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGATGTCACTCGCTGTCTGGAGGCACGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 90 bp TTTGTATTTTATCTGTCTTATGCCACTCTGTTTGCCACTCTTTCATaGTCACCCCATGCTGGGATCCCATGCTGGGAGCTCAGTCTGCCT +
Preference number: 1 (lower is better)
Translates to: FVFYLSYATLFATLS*SPHAGIPCWELSLP
Trigger: AGGCAGACTGAGCTCCCAGCATGGGATCCCAGCATGGGGTGAGCATGAAAGAGTGGCAAACAGAGTGGCATAAGACAGATAAAATACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 90 bp TTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATaGCAGCAACTTACCTGCCCACGCCTATTAGTGTGTACTTATTTC +
Preference number: 1 (lower is better)
Translates to: FKGLLREIKQGASRI*QQLTCPRLLVCTYF
Trigger: GAAATAAGTACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp CCCCATGAAATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTaGATGTCCTCAGAACAAGTCTCTACGTTCACGGTTAGCACCAGG +
Preference number: 1 (lower is better)
Translates to: PHEIHRLVGEIPTIV*MSSEQVSTFTVSTR
Trigger: CCTGGTGCTAACCGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAATTTCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp GCACAGTCATTCCCCTGGACTGGAAGGTCCTTGTTTATAGGGACTTaGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACC +
Preference number: 1 (lower is better)
Translates to: AQSFPWTGRSLFIGT*SVYPLIHHSSIILT
Trigger: GGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAATGACTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp ACACATATCAAGTGTATTCATGGCCTAGCAAGTTCAAGGGTTTGCTaGGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGCAACTTA +
Preference number: 1 (lower is better)
Translates to: THIKCIHGLASSRVC*GKSSKEPAGYGSNL
Trigger: TAAGTTGCTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGAATACACTTGATATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 90 bp CCACACTCCAATGGATCATCTATAGACACATATCAAGTGTATTCATaGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGA +
Preference number: 1 (lower is better)
Translates to: PHSNGSSIDTYQVYS*PSKFKGLLREIKQG
Trigger: TCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGAATACACTTGATATGTGTCTATAGATGATCCATTGGAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp GAGACTGTTCTTTCCCCAATGTATGTTCTTGGCATCTGTCAAAAATaGGTTCATTGTAGATATATGGCTTCTGGGTTCTCTATTCTGTTC +
Preference number: 1 (lower is better)
Translates to: ETVLSPMYVLGICQK*VHCRYMASGFSILF
Trigger: GAACAGAATAGAGAACCCAGAAGCCATATATCTACAATGAACTCATTTTTGACAGATGCCAAGAACATACATTGGGGAAAGAACAGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR TCA 90 bp ATTACAGCCTTAACTTTCATATTTCTTGATGGATGGGGATTTCTATaGAACAGAGTAGCGATAACTCCCAGTTTTCTGACTTGGATCACT +
Preference number: 1 (lower is better)
Translates to: ITALTFIFLDGWGFL*NRVAITPSFLTWIT
Trigger: AGTGATCCAAGTCAGAAAACTGGGAGTTATCGCTACTCTGTTTCATAGAAATCCCCATCCATCAAGAAATATGAAAGTTAAGGCTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 90 bp TTTAGGCAGTGTGGGCATTTTAACAATACTGATTCTTCCAATCCATaGACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTC +
Preference number: 1 (lower is better)
Translates to: FRQCGHFNNTDSSNP*TWNIIPIFGVHFNF
Trigger: GAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAATCAGTATTGTTAAAATGCCCACACTGCCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR GCA 90 bp GAATGTCATTGGTATTTTGATAGGAATTGTACTGAATCTGTAGACTaGTTTAGGCAGTGTGGGCATTTTAACAATACTGATTCTTCCAAT +
Preference number: 1 (lower is better)
Translates to: ECHWYFDRNCTESVD*FRQCGHFNNTDSSN
Trigger: ATTGGAAGAATCAGTATTGTTAAAATGCCCACACTGCCTAAAGCAGTCTACAGATTCAGTACAATTCCTATCAAAATACCAATGACATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCCAGAGGCTGGCCAGTaGGGGCCCGCACACCACCCA +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPPEAGQ*GPAHHP
Trigger: TGGGTGGTGTGCGGGCCCTCACTGGCCAGCCTCTGG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGCTGCGGCTTGTACTaGTCAACACGCCCCCGGGTG +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGCGLY*STRPRV
Trigger: CACCCGGGGGCGTGTTGATCAGTACAAGCCGCAGCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGGGCCCAGAAGGGCTaGTCAGTCCTGCCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGAQKG*SVLPLA
Trigger: TGCCAGAGGCAGGACTGACCAGCCCTTCTGGGCCCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTGTCTGGCTTGCCCTaGGGCCCAGAAGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVSGLP*GPEGLV
Trigger: GACCAGCCCTTCTGGGCCCCAGGGCAAGCCAGACAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTCGAGGCCGTCGAGGTaGCCTGGCCGTACGCGGAGA +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSRPSR*PGRTRR
Trigger: TCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp CGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTaGCTTCGCGTCCGGCTCTCAGGCCCTGGAGCTCGGCCTCCCTAC +
Preference number: 2 (lower is better)
Translates to: RVPSLQPGPRAASSL*LRVRLSGPGARPPY
Trigger: GTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGATGGGACGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGTCCCCAGGGCATGTaGAGGTGGCACAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCPQGM*RWHRSQ
Trigger: CTGGGACCTGTGCCACCTGCACATGCCCTGGGGACA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGCTGGGATCCCATGCTaGGAGCTCAGTCTGCCTAGG +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRAGIPC*ELSLPR
Trigger: CCTAGGCAGACTGAGCTCCCAGCATGGGATCCCAGC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCATGCTCACCCCATGCTaGGATCCCATGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRMLTPC*DPMLGA
Trigger: AGCTCCCAGCATGGGATCCCAGCATGGGGTGAGCAT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGCCAGAGGCTGGCCAGTaGGGGCCCGCACACCACCCA +
Preference number: 2 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKPEAGQ*GPAHHP
Trigger: TGGGTGGTGTGCGGGCCCTCACTGGCCAGCCTCTGG...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGTATCAGCCTCGAGGTaGGGCGTGGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRVSASR*GVALGK
Trigger: CTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATAC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGACTCTCTGGAGTCCTaGATGGGTCAGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRDSLES*MGQWLW
Trigger: CCACAGCCACTGACCCATCCAGGACTCCAGAGAGTC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGACGCCTGAGGCGCTaGCGCGCGCCGCGCGAGAAG +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGRRLRR*RAPREK
Trigger: CTTCTCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCAACACCCGCATCACTaGCCCCCAGTACTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPQHPHH*PPVLPG
Trigger: TCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGAGGGCCTTGACCAGTaGCTGACTGATGGGGGACAA +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPEGLDQ*LTDGGQ
Trigger: TTGTCCCCCATCAGTCAGTCACTGGTCAAGGCCCTC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGGGGAGGGCGGTTCCTaGTGCCAGGCTGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGGEGGS*CQAGAA
Trigger: TGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCCTTGTGGGCTGAGGTaGCGAGGCCTCCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAPCGLR*RGLPLP
Trigger: AGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGGGCCACCCAGAGGCTaGCCAGTGAGGGCCCGCACA +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGGPPRG*PVRART
Trigger: TGTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCAGCCCCGGAGAGCTaGATTTCCCCTATCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAAPES*ISPICF
Trigger: GAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAGACGCTCAGAAGTCTaGGCCCACTGGTTTATCTCT +
Preference number: 2 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRRSEV*AHWFIS
Trigger: AGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGGGCTGGTCAGTCCTaGCTCTGGCAGGCAATCTGG +
Preference number: 2 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRAGQS*LWQAIW
Trigger: CCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGAGGGCGGTTCCTGCTaGCAGGCTGGGGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLREGGSC*QAGAAD
Trigger: GTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGACTGGAGCAGGCCGTaGGGTATGCCAAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPDWSRP*GMPKPW
Trigger: CCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGTGTCACTCAGTGTCTaGCTTGCCCTGGGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VHTGIGGATQRLASEGPHVSLSV*LALGPR
Trigger: TCTGGGCCCCAGGGCAAGCCAGACACTGAGTGACAC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTCACGGTCCCCTCCCTaGCTTCTCTTACAGCGGCAG +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSRSPP*LLLQRQ
Trigger: CTGCCGCTGTAAGAGAAGCCAGGGAGGGGACCGTGA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGAGACGGACGAGGGCTaGCACAGTCAGGGAATCCTG +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRETDEG*HSQGIL
Trigger: CAGGATTCCCTGACTGTGCCAGCCCTCGTCCGTCTC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCACCTCATTAAAGGATaGGAAACCCAGGGTCCGAGA +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRHLIKG*ETQGPR
Trigger: TCTCGGACCCTGGGTTTCTCATCCTTTAATGAGGTG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCTGCTTCCCTCCCATTaGGAAGCCAGTGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: VHTGIGGATQRLASEGPHLLPSH*EASARV
Trigger: AACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGGTTTTGGCTCAGGTaGGAAAGGTGGAAACACACA +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGFWLR*ERWKHT
Trigger: TGTGTGTTTCCACCTTTCTCACCTGAGCCAAAACCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCGGTGGGTGGACACTaGGATGTCTGGGAAAGGGCT +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPAVGGH*DVWERA
Trigger: AGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGGGAGGGCGGTTCCTaGTGCCAGGCTGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGEGGS*CQAGAA
Trigger: TGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCATGGGTCAGTGGCTGTaGGTGTTTGGGGAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPMGQWL*VFGEGG
Trigger: ACCGCCCTCCCCAAACACCCACAGCCACTGACCCAT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTCCTGGATGGGTCAGTaGCTGTGGGTGTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSWMGQ*LWVFGE
Trigger: CTCCCCAAACACCCACAGCCACTGACCCATCCAGGA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCTGTCCTTCAGGCCCTaGCAGGAGCCTGGACCCCAC +
Preference number: 2 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSLSFRP*QEPGPH
Trigger: GTGGGGTCCAGGCTCCTGCCAGGGCCTGAAGGACAG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGGAAGGAAAGGTTTTaGAAAGTACTGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGKERF*KVLEAG
Trigger: TCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGCTGGGATCCCATGCTaGGAGCTCAGTCTGCCTAGG +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAAGIPC*ELSLPR
Trigger: CCTAGGCAGACTGAGCTCCCAGCATGGGATCCCAGC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp CCCACATCTGTCCTTCAGGCCCTGGCAGGAGCCTGGACCCCACATTaGTCCACATCTGTCCCCAGGGCATGTGCAGGTGGCACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: PTSVLQALAGAWTPH*STSVPRACAGGTGP
Trigger: GGGACCTGTGCCACCTGCACATGCCCTGGGGACAGATGTGGACAAATGTGGGGTCCAGGCTCCTGCCAGGGCCTGAAGGACAGATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAGGGCTGGTCAGTCCTaGCTCTGGCAGGCAATCTGG +
Preference number: 2 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKRAGQS*LWQAIW
Trigger: CCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTGTCCCCAGGGCATGTaGAGGTGGCACAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRCPQGM*RWHRSQ
Trigger: CTGGGACCTGTGCCACCTGCACATGCCCTGGGGACA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGTCTGGGAAAGGGCTTaGCCCTCAGCCATCACTGAA +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRVWERA*PSAITE
Trigger: TTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGAC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTTCCTGCTGCCAGGCTaGGGCAGCAGACCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKFLLPG*GSRPSR
Trigger: TCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGTGGCTGTGGGTGTTTaGGGAGGGCGGTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRVAVGV*GGRFLL
Trigger: CAGCAGGAACCGCCCTCCCCAAACACCCACAGCCAC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGACTCTCTGGAGTCCTaGATGGGTCAGTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKADSLES*MGQWLW
Trigger: CCACAGCCACTGACCCATCCAGGACTCCAGAGAGTC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTAGAGGGCTTGAGTTaGCTACGTTCATACTGGGAT +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVEGLS*LRSYWD
Trigger: ATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGATCCACCTGATGGCTaGCCGAGTACCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGDPPDG*PSTPGS
Trigger: GCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCCAGGTGCCATGGACTaGAGACCTGGGGAGACGGAC +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGPGAMD*RPGETD
Trigger: GTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTGGGATGGGGAGGCCTaGAATGTCTGCTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAWDGEA*NVCLEL
Trigger: CAGCTCCAAGCAGACATTCCAGGCCTCCCCATCCCA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCTGCCTCTGCGGTCCTaGTCCTTTGTAAATTGCCTT +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPLPLRS*SFVNCL
Trigger: AAGGCAATTTACAAAGGACCAGGACCGCAGAGGCAG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTATCAGCCTCGAGGTaGGGCGTGGCCCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVSASR*GVALGK
Trigger: CTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGTACCCCAGGGAGCTaGTCGAATAGCAGTCAAGGC +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKASTPGS*SNSSQG
Trigger: GCCTTGACTGCTATTCGATCAGCTCCCTGGGGTACT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGCTAAGATCAGGGGATaGTGGGAGGAGGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGAKIRG*WEEVDG
Trigger: GCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGTCCGAGCCGGGGGCTaGGGCCCGTTCTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGVRAGG*GPFSLQ
Trigger: CTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGAC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGGGGGTTCACAAGCCTTaGATAGCAGCGCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: GAPEGAACQPFVPSALPVGVHKP*IAAPLR
Trigger: CCTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCC...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTG +
Preference number: 2 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSHLLL*IKDDLL
Trigger: CAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGTCAAATGTCAAATCCTaGAGAGGCCAAACAGGCTCA +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRSNVKS*RGQTGS
Trigger: TGAGCCTGTTTGGCCTCTGCAGGATTTGACATTTGA...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTTCATGCTCACCCCATaGTGGGATCCCATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAFMLTP*WDPMLG
Trigger: TCCCAGCATGGGATCCCAGCATGGGGTGAGCATGAA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTTGGCCCCTCGGCACCTaGAACGTGGCAGGTCCGCCG +
Preference number: 2 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAWPLGT*NVAGPP
Trigger: CGGCGGACCTGCCACGTTCCAGGTGCCGAGGGGCCA...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCTCAAGGGACACAGGTaGCTGACAGTGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPLKGHR*LTVVKG
Trigger: GCCTTTGACCACTGTCAGCCACCTGTGTCCCTTGAG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGGGCCACCCAGAGGCTaGCCAGTGAGGGCCCGCACA +
Preference number: 2 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSGPPRG*PVRART
Trigger: TGTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGCCCTGGCAGGAGCCTaGACCCCACATTTGTCCACA +
Preference number: 2 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSALAGA*TPHLST
Trigger: TGTGGACAAATGTGGGGTCCAGGCTCCTGCCAGGGC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGAGACGGACGAGGGCTaGCACAGTCAGGGAATCCTG +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGETDEG*HSQGIL
Trigger: CAGGATTCCCTGACTGTGCCAGCCCTCGTCCGTCTC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGGAGGCAGGAGGCGGTaGGTGGACACTGAGATGTCT +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGGGRRR*VDTEMS
Trigger: AGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTCCTCGGGGTTGACCTaGCTCTCTGGAGTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSSGLT*LSGVLD
Trigger: ATCCAGGACTCCAGAGAGTCAGGTCAACCCCGAGGA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCACCTCATTAAAGGATaGGAAACCCAGGGTCCGAGA +
Preference number: 2 (lower is better)
Translates to: VHTGIGGATQRLASEGPHHLIKG*ETQGPR
Trigger: TCTCGGACCCTGGGTTTCTCATCCTTTAATGAGGTG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCTGCTTCCCTCCCATTaGGAAGCCAGTGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGLLPSH*EASARV
Trigger: AACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGTGGGGACAGCACGTaGGGCTGCCAGCCTAGGTCA +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSGDST*GCQPRS
Trigger: TGACCTAGGCTGGCAGCCTCACGTGCTGTCCCCACT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRDGGHK*FKGRAG
Trigger: CCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCCTATCTGTTTCAACTaGTGGAAGATGAAGGCTACA +
Preference number: 2 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRPICFN*WKMKAT
Trigger: TGTAGCCTTCATCTTCCAGCAGTTGAAACAGATAGG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGAGGCCCGTTCTCTCTaGAGGAGACCAAGAGAAGGG +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGEARSL*RRPREG
Trigger: CCCTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGTGGCTGTGGGTGTTTaGGGAGGGCGGTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEVAVGV*GGRFLL
Trigger: CAGCAGGAACCGCCCTCCCCAAACACCCACAGCCAC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTCCTGGATGGGTCAGTaGCTGTGGGTGTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSWMGQ*LWVFGE
Trigger: CTCCCCAAACACCCACAGCCACTGACCCATCCAGGA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGTTGACCTGACTCTCTaGAGTCCTGGATGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPVDLTL*SPGWVS
Trigger: ACTGACCCATCCAGGACTCCAGAGAGTCAGGTCAAC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTGGCTACGTTCATACTaGGATAGGCGGGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRWLRSY*DRRGHP
Trigger: TGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGCTGTTTTCTCCTTGTaGGCTGAGGTGCCGAGGCCT +
Preference number: 2 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRAVFSL*AEVPRP
Trigger: AGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCCTCGAGGTGAGGCGTaGCCCTGGGGAAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGPRGEA*PWGREL
Trigger: GAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATGTCTGCTTGGAGCTaGATGTGGCTAAGATCAGGG +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRMSAWS*MWLRSG
Trigger: CCCTGATCTTAGCCACATCCAGCTCCAAGCAGACAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCCTGGAATGTCTGCTTaGAGCTGGATGTGGCTAAGA +
Preference number: 2 (lower is better)
Translates to: REGLEQAVRYAKALGCPRPGMSA*SWMWLR
Trigger: TCTTAGCCACATCCAGCTCCAAGCAGACATTCCAGG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTCATGGATGGGAACCTaGCAGGAAACATCCGGGAGT +
Preference number: 2 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKSWMGT*QETSGS
Trigger: ACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTG +
Preference number: 2 (lower is better)
Translates to: VHTGIGGATQRLASEGPHSHLLL*IKDDLL
Trigger: CAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGT +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSVRRRG*TVGTAR
Trigger: ACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCAC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGAATCCTGGAAGAGGTaGAGAGAGAGCCAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGESWKR*RESQGR
Trigger: CCTCCCTTGGCTCTCTCTGCACCTCTTCCAGGATTC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACATCGGCACCTGGAACGTaGCAGGTCCGCCGCAGCACC +
Preference number: 2 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTSAPGT*QVRRST
Trigger: GGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTTCCTGCTGCCAGGCTaGGGCAGCAGACCCTCAAGA +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLFLLPG*GSRPSR
Trigger: TCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGATGGGTCAGTGGCTGTaGGTGTTTGGGGAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLMGQWL*VFGEGG
Trigger: ACCGCCCTCCCCAAACACCCACAGCCACTGACCCAT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGGCAGAGCTGGGATTaGAACCCAGGTGTCATCTCG +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGRQSWD*NPGVIS
Trigger: CGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCCTCGAGGTGAGGCGTaGCCCTGGGGAAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIPRGEA*PWGREL
Trigger: GAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCATGGACTGGAGACCTaGGGAGACGGACGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSHGLET*GDGRGL
Trigger: CAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTGACCCAGGTGCCATaGACTGGAGACCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVTQVP*TGDLGR
Trigger: TCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCACTACTGGTCAATGGTaGGGGCAGAAAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: NHEQCSFVRRASKESPAPTTGQW*GQKTDG
Trigger: CCCATCTGTTTTCTGCCCCCACCATTGACCAGTAGT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGCCGTCGAGGTGGCCTaGCCGTACGCGGAGACGCCT +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSAVEVA*PYAETP
Trigger: AGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCGGCCTCCCCAGGCATaGCGCCGCTGCGCTTCTCCG +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARPPQA*RRCASP
Trigger: CGGAGAAGCGCAGCGGCGCCATGCCTGGGGAGGCCG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp TGCCAGGCTGGGGCAGCAGACCCTCAAGACATAGTTACAAAGCCTTaGGTGTCACTCAGTGTCTGGCTTGCCCTGGGGCCCAGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: CQAGAADPQDIVTKP*VSLSVWLALGPRRA
Trigger: AGCCCTTCTGGGCCCCAGGGCAAGCCAGACACTGAGTGACACCAAAGGCTTTGTAACTATGTCTTGAGGGTCTGCTGCCCCAGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTTTCTCCTTGTGGGCTaGGGTGCCGAGGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGFLLVG*GAEASL
Trigger: GAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGATACCTGGGCATCGTaGCCCAGGTGCCATGGACTG +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSDTWAS*PRCHGL
Trigger: CAGTCCATGGCACCTGGGTCACGATGCCCAGGTATC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCGCACACCACCCACGTaGCTCCAGACAGCGAGTGAC +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRTPPT*LQTASD
Trigger: GTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACGCACACCACCCACGTaGCTCCAGACAGCGAGTGAC +
Preference number: 2 (lower is better)
Translates to: EPSSPGELNFPYLFQLLERTPPT*LQTASD
Trigger: GTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGAGAGGACCTTCCTTTaGCCTCCCACCCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSERTFL*PPTLSI
Trigger: GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTACATCCGGGAGTTCCTaGCCATTGTTGGTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSTSGSS*PLLVRG
Trigger: TCCTCTCACCAACAATGGGCAGGAACTCCCGGATGT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCAGGACCTCGTGGGACTaGTGGAGCCCATCAACACCC +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSRTSWD*WSPSTP
Trigger: GGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCTCTGGAGTCCTGGATaGGTCAGTGGCTGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLWSPG*VSGCGC
Trigger: ACACCCACAGCCACTGACCCATCCAGGACTCCAGAG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGTGAGGCGTGGCCCTaGGGAAGGGAGCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGEAWP*GRELWR
Trigger: CCTCCAGAGCTCCCTTCCCCAGGGCCACGCCTCACC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGCCCTGGCAGGAGCCTaGACCCCACATTTGTCCACA +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSALAGA*TPHLST
Trigger: TGTGGACAAATGTGGGGTCCAGGCTCCTGCCAGGGC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACTGTCCTTCAGGCCCTaGCAGGAGCCTGGACCCCAC +
Preference number: 2 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGLSFRP*QEPGPH
Trigger: GTGGGGTCCAGGCTCCTGCCAGGGCCTGAAGGACAG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGAAGGGGGTGCACAGTaGGGACAGCACGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSEGGAQ*GQHVRL
Trigger: CAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGAGGGGATCACTACTaGTCAATGGTGGGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGRGDHY*SMVGAE
Trigger: TTCTGCCCCCACCATTGACCAGTAGTGATCCCCTCT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTCCTCGGGGTTGACCTaGCTCTCTGGAGTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSSSGLT*LSGVLD
Trigger: ATCCAGGACTCCAGAGAGTCAGGTCAACCCCGAGGA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGTTTGCCACCCTGTGTaGACTCCCGAGACTCTACCA +
Preference number: 2 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEVCHPV*TPETLP
Trigger: TGGTAGAGTCTCGGGAGTTCACACAGGGTGGCAAAC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCCTGCCCATTGTTGGTaGGAGGACCTTCCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSPAHCW*EDLPLP
Trigger: GGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTCCAGGCGCGGGTCCTaGTCCTTTTCCGGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASRRGS*SFSGRP
Trigger: AGGGCGGCCGGAAAAGGAGCAGGACCCGCGCCTGGA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTaGTTCGCGTCCGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQPALS*FASGSQ
Trigger: CTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACACTTGGCTGGGAGCCATaGCCCGGCGAGGACTTAGGT +
Preference number: 2 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTLGWEP*PGEDLG
Trigger: ACCTAAGTCCTCGCCGGGCCATGGCTCCCAGCCAAG...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGGGCCCAGAAGGGCTaGTCAGTCCTGCCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGAQKG*SVLPLA
Trigger: TGCCAGAGGCAGGACTGACCAGCCCTTCTGGGCCCC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGACCCCCAGTACTTCCTaGACACGCCCCAGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGTPSTS*TRPSRV
Trigger: TACCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGCTAGGAGGACCTCGTaGGACTGCTGGAGCCCATCA +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAARRTS*DCWSPS
Trigger: TGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGAAGGGGGTGCACAGTaGGGACAGCACGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QILQRPNRLRRNWQEGITEGGAQ*GQHVRL
Trigger: CAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCAGTCAAGGCTGAGATaGAGGCCGTTTTTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGQSRLR*RPFFWR
Trigger: TCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGATCCACCTGATGGCTaGCCGAGTACCCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: QILQRPNRLRRNWQEGITDPPDG*PSTPGS
Trigger: GCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGGAGGCAGGAGGCGGTaGGTGGACACTGAGATGTCT +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGGGRRR*VDTEMS
Trigger: AGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGGGAAGGAAAGGTTTTaGAAAGTACTGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKGKERF*KVLEAG
Trigger: TCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCATCACTACTGGTCAATaGTGGGGGCAGAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAITTGQ*WGQKTD
Trigger: ATCTGTTTTCTGCCCCCACCATTGACCAGTAGTGAT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: KFKGLLREIKQGASRIWQSFGIP*TPSSGP
Trigger: GGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGA...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCAACACCCGCATCACTaGCCCCCAGTACTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAQHPHH*PPVLPG
Trigger: TCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGGAGGTCACACTCTGTaGTTGCTGCAAGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGGGHTL*LLQAAE
Trigger: TTCCGCAGCTTGCAGCAAGCACAGAGTGTGACCTCC...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCTTGTGGGCTGAGGTaGCGAGGCCTCCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPCGLR*RGLPLP
Trigger: AGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGTGTCTGGCTTGCCCTaGGGCCCAGAAGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRVSGLP*GPEGLV
Trigger: GACCAGCCCTTCTGGGCCCCAGGGCAAGCCAGACAC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGTGTCACTCAGTGTCTaGCTTGCCCTGGGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIVSLSV*LALGPR
Trigger: TCTGGGCCCCAGGGCAAGCCAGACACTGAGTGACAC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGCAGTGATGTCCAAGTaGGAAGTGAAGACCCGAAGG +
Preference number: 2 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEAVMSK*EVKTRR
Trigger: CCTTCGGGTCTTCACTTCCCACTTGGACATCACTGC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCAGGGCATGTGCAGGTaGCACAGGTCCCAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKQGMCR*HRSQAE
Trigger: CTCGGCCTGGGACCTGTGCCACCTGCACATGCCCTG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTTGGGATGGGGAGGCCTaGAATGTCTGCTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAWDGEA*NVCLEL
Trigger: CAGCTCCAAGCAGACATTCCAGGCCTCCCCATCCCA...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCTTGCAAGGGTGCTGTaGCAAGAGGAGGCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGLARVL*QEEAWC
Trigger: ACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp CTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTTaGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCCCACTC +
Preference number: 2 (lower is better)
Translates to: LARVTLRTGTWDFVA*IPVPPRSFRLGAPL
Trigger: GAGTGGGGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGCAGCCCCGGAGAGCTaGATTTCCCCTATCTGTTTC +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGAAPES*ISPICF
Trigger: GAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGAGGGCCTTGACCAGTaGCTGACTGATGGGGGACAA +
Preference number: 2 (lower is better)
Translates to: QILQRPNRLRRNWQEGITEGLDQ*LTDGGQ
Trigger: TTGTCCCCCATCAGTCAGTCACTGGTCAAGGCCCTC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCCTGTGGCCTGGGTGCTaGCGACTGCTTGCTCCTTCG +
Preference number: 2 (lower is better)
Translates to: WDFVALIPVPPRSFRLGALWPGC*RLLAPS
Trigger: CGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAG...GGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACGGAGACTGCTGCCTGTaGCAAATTGGTGAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHGDCCL*QIGEEG
Trigger: GCCTTCCTCACCAATTTGGCACAGGCAGCAGTCTCC...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGAGGGCGGTTCCTGCTaGCAGGCTGGGGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLEGGSC*QAGAAD
Trigger: GTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIDGGHK*FKGRAG
Trigger: CCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCCATTGAGAAGCCAGTaGCAGGGTTGCTGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLPLRSQ*QGCCED
Trigger: ATCTTCACAGCAACCCTGGCACTGGCTTCTCAATGG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGT +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAVRRRG*TVGTAR
Trigger: ACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCAC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGAAGCGGACAGACAGTaGATGAAGTCGCCGGGTGTG +
Preference number: 2 (lower is better)
Translates to: ARPSMENTASTRVYAERGEADRQ*MKSPGV
Trigger: CACACCCGGCGACTTCATCCACTGTCTGTCCGCTTC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR CCA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCCAGGCAGCCAGACGCTaGACATCTGAGAAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLQAARR*TSEKVA
Trigger: AGCTACCTTCTCAGATGTCCAGCGTCTGGCTGCCTG...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTACTTATTTCTTGGCTaGGAGCCATGGCCCGGCGAG +
Preference number: 2 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHYLFLG*EPWPGE
Trigger: CTCGCCGGGCCATGGCTCCCAGCCAAGAAATAAGTA...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCTCTGGAGTCCTGGATaGGTCAGTGGCTGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: QILQRPNRLRRNWQEGITLWSPG*VSGCGC
Trigger: ACACCCACAGCCACTGACCCATCCAGGACTCCAGAG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCAGTGATGTCCAAGTaGGAAGTGAAGACCCGAAGG +
Preference number: 2 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHAVMSK*EVKTRR
Trigger: CCTTCGGGTCTTCACTTCCCACTTGGACATCACTGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGACCCCCAGTACTTCCTaGACACGCCCCAGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSTPSTS*TRPSRV
Trigger: TACCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCCTGAGGCATGCAGCTaGGGTTTTGGCTCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: QILQRPNRLRRNWQEGITPEACS*GFGSGE
Trigger: CTCACCTGAGCCAAAACCCCAGCTGCATGCCTCAGG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCAGTCAAGGCTGAGATaGAGGCCGTTTTTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLQSRLR*RPFFWR
Trigger: TCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGGTATGCCAAAGCCCTaGGCTGTCCCAGGTACCCCG +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAGMPKP*AVPGTP
Trigger: CGGGGTACCTGGGACAGCCCAGGGCTTTGGCATACC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp TTCAAGGAGTGGGCATTGCTTGATGGGCAGGAAGTTGAGTGTTCCTaGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGC +
Preference number: 2 (lower is better)
Translates to: FKEWALLDGQEVECS*QGCCGKRRPGVFGS
Trigger: GCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGCTCCTGTGGCCTGGGTaGTGCCGACTGCTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTLLWPG*CRLLAP
Trigger: AGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAG...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGAGAGGACCTTCCTTTaGCCTCCCACCCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAERTFL*PPTLSI
Trigger: GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCCTCAAGAAGGCAGCCTaGTCAACGGGGGTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: WDFVALIPVPPRSFRLGALKKAA*STGVSG
Trigger: CCCACTGACCCCCGTTGACCAGGCTGCCTTCTTGAG...GGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTCTAGATCTTTCAGACTaGGAGCCCCACTCCAATCCC +
Preference number: 2 (lower is better)
Translates to: SSQASTAVSKSWEVTLCALDLSD*EPHSNP
Trigger: GGGATTGGAGTGGGGCTCCCAGTCTGAAAGATCTAG...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTGGCTACGTTCATACTaGGATAGGCGGGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSWLRSY*DRRGHP
Trigger: TGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTACTTACATGTCTCTGTaGGTGTGCGGAGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSTYMSL*VCGEGG
Trigger: ACCCCCTTCTCCGCACACCCACAGAGACATGTAAGT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTGACTTAGGTCAACACTaGAGGCACTCACCGGAAGAT +
Preference number: 2 (lower is better)
Translates to: SSQASTAVSKSWEVTLCADLGQH*RHSPED
Trigger: ATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTC...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATGTCCAAGTGGGAAGTaGAGACCCGAAGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGCPSGK*RPEGSR
Trigger: CCTTGAGCCTTCGGGTCTTCACTTCCCACTTGGACA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTTTCTCCTTGTGGGCTaGGGTGCCGAGGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLFLLVG*GAEASL
Trigger: GAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATCATGGATGGGAACCTaGCAGGAAACATCCGGGAGT +
Preference number: 2 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGSWMGT*QETSGS
Trigger: ACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTTGGCAGCAACTTACCTaGCCACGCCTATTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAWQQLT*PRLLVC
Trigger: ACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCA...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGTTCAAGACCAGCCTTaGCCTCCCAAAGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ARPSMENTASTRVYAERGVQDQP*PPKVLG
Trigger: TCCCAACACTTTGGGAGGCCAAGGCTGGTCTTGAAC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR CCA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTGTCAGAAACACATGCTaGGGGTTCACAAGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGVRNTC*GFTSLA
Trigger: TGCAAGGCTTGTGAACCCCCAGCATGTGTTTCTGAC...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGGTGTCATCTCGATaGGAATGTCCAGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQVSSR*ECPAVM
Trigger: CATCACTGCTGGACATTCCCATCGAGATGACACCTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp ACCTCATTAAAGGATGAGAAACCCAGGGTCCGAGAGCAAAGGGACTaGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAA +
Preference number: 2 (lower is better)
Translates to: TSLKDEKPRVREQRD*TVATSASKAELGLE
Trigger: TTCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGCTCTCGGACCCTGGGTTTCTCATCCTTTAATGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGAGGCGGGCAAATCATaGTGTCAAGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: ARPSMENTASTRVYAERGEAGKS*CQEFKT
Trigger: GGTCTTGAACTCTTGACATCATGATTTGCCCGCCTC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR TCA 90 bp TCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCAGGTGCTTAGATACTACCTTCCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGAC +
Preference number: 2 (lower is better)
Translates to: SVSRRQSTTASQVLRYYLPQRFQ*TAVDVD
Trigger: GTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGG...AAGGTAGTATCTAAGCACCTGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGCACTCACCGGAAGATaGGGTCTCGGGGCGCCTGAG +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQALTGR*GLGAPE
Trigger: CTCAGGCGCCCCGAGACCTCATCTTCCGGTGAGTGC...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTAGTTCAAGGGTTTGCTaGGGGAAATCAAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: SSQASTAVSKSWEVTLCASSRVC*GKSSKE
Trigger: CTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACT...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAACCAACTCCCTTAAGTaGTACCTCACACTCATTAGC +
Preference number: 2 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGTNSLK*YLTLIS
Trigger: GCTAATGAGTGTGAGGTATCACTTAAGGGAGTTGGT...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGTTTGCCACCCTGTGTaGACTCCCGAGACTCTACCA +
Preference number: 2 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKVCHPV*TPETLP
Trigger: TGGTAGAGTCTCGGGAGTTCACACAGGGTGGCAAAC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTGTCCAAGTGGGAAGTaGAGACCCGAAGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRCPSGK*RPEGSR
Trigger: CCTTGAGCCTTCGGGTCTTCACTTCCCACTTGGACA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTCAAATGTCAAATCCTaGAGAGGCCAAACAGGCTCA +
Preference number: 2 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSSNVKS*RGQTGS
Trigger: TGAGCCTGTTTGGCCTCTGCAGGATTTGACATTTGA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCTCAAGGGACACAGGTaGCTGACAGTGGTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRLKGHR*LTVVKG
Trigger: GCCTTTGACCACTGTCAGCCACCTGTGTCCCTTGAG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGGCAGAGCTGGGATTaGAACCCAGGTGTCATCTCG +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARQSWD*NPGVIS
Trigger: CGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGATGGGGGACAAACTTaGGAAGGAGCTCTATTCACA +
Preference number: 2 (lower is better)
Translates to: RKDSVLKCASHHCNRALGDGGQT*EGALFT
Trigger: TGTGAATAGAGCTCCTTCCCAAGTTTGTCCCCCATC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp TTACAGGTAGTGATGCTTGGACTGTCTTCAAGGAGTGGGCATTGCTaGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGTGCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: LQVVMLGLSSRSGHC*MGRKLSVPCKGAVA
Trigger: TGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCACTACCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 90 bp CTGCTTACAGGTAGTGATGCTTGGACTGTCTTCAAGGAGTGGGCATaGCTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLTGSDAWTVFKEWA*LDGQEVECSLQGCC
Trigger: ACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCACTACCTGTAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACAGGACTTAGCTCTCCTTaGTTCTGGGCATTGTCACTA +
Preference number: 2 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTGLSSP*FWALSL
Trigger: TAGTGACAATGCCCAGAATCAAGGAGAGCTAAGTCC...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCCCCTCAGCCATCACTaGAGTGTCTCTGAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAPLSHH*SVSESA
Trigger: AGCACTTTCAGAGACACTTCAGTGATGGCTGAGGGG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GGGACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACC +
Preference number: 2 (lower is better)
Translates to: GTWSVYPLIHHSSIILTWERTRT*GCMRQT
Trigger: GGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTC...CCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTGAGGAAGGCTGCATaGGAGTCCGTGAGCCGGCGA +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQVRKAA*ESVSRR
Trigger: TCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCAC...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACAGGTGTCATCTCGATaGGAATGTCCAGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGQVSSR*ECPAVM
Trigger: CATCACTGCTGGACATTCCCATCGAGATGACACCTG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGTAGAGGGCTTGAGTTaGCTACGTTCATACTGGGAT +
Preference number: 2 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIVEGLS*LRSYWD
Trigger: ATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACAGTCAGGGAATCCTaGAAGAGGTGCAGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATVRES*KRCRES
Trigger: GCTCTCTCTGCACCTCTTCCAGGATTCCCTGACTGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGACAGTCAGGGAATCCTaGAAGAGGTGCAGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKTVRES*KRCRES
Trigger: GCTCTCTCTGCACCTCTTCCAGGATTCCCTGACTGT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACAAACGCCGGATAACATaGGTACGATACAATGAACGA +
Preference number: 2 (lower is better)
Translates to: EEWHSALGAVRKREMLRHKRRIT*VRYNER
Trigger: TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTT...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTTAAAGATGACCTGCTaGACATTGTCATATGTCTCT +
Preference number: 2 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLKMTC*TLSYVS
Trigger: AGAGACATATGACAATGTTCAGCAGGTCATCTTTAA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTCTGGGTGCTGCCGACTaGTTGCTCCTTCGGGATCCC +
Preference number: 2 (lower is better)
Translates to: TWSVYPLIHHSSIILTWILGAAD*LLLRDP
Trigger: GGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAG...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCTATCTGTTTCAACTaGTGGAAGATGAAGGCTACA +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPICFN*WKMKAT
Trigger: TGTAGCCTTCATCTTCCAGCAGTTGAAACAGATAGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAAGTTGAGTGTTCCTTaGAAGGGTGCTGTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSKLSVP*KGAVAR
Trigger: TCTTGCCACAGCACCCTTGCAAGGAACACTCAACTT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp TGGTTGATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATGAACGAATGGGCTaGCTTAGTGCACAGGACACA +
Preference number: 2 (lower is better)
Translates to: WLMLCSVFQKRRITWVRYNERMG*LSAQDT
Trigger: TGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATT...GTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCATCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTATTACAAATGGTAAGTaGAAGGGGGTACTTCGCAGA +
Preference number: 2 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAITNGK*KGVLRR
Trigger: TCTGCGAAGTACCCCCTTCCACTTACCATTTGTAAT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACTACTGGTCAATGGTaGGGGCAGAAAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATTGQW*GQKTDG
Trigger: CCCATCTGTTTTCTGCCCCCACCATTGACCAGTAGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCGGGTGGTCGAGGAACTaGGTCCTAGGAAACGAAGGG +
Preference number: 2 (lower is better)
Translates to: SSNLGVISISILLVLLFPGWSRN*VLGNEG
Trigger: CCCTTCGTTTCCTAGGACTCAGTTCCTCGACCACCC...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTCAACTGCTGGAAGATaGAGGCTACAAAGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRSTAGR*RLQRLR
Trigger: ACGAAGCCTTTGTAGCCTTCATCTTCCAGCAGTTGA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGTTGACCTGACTCTCTaGAGTCCTGGATGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLVDLTL*SPGWVS
Trigger: ACTGACCCATCCAGGACTCCAGAGAGTCAGGTCAAC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTGGCAGATCATGGATaGGAACCTGACAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLADHG*EPDRKH
Trigger: ATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCTGGCAGATCATGGATaGGAACCTGACAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRLADHG*EPDRKH
Trigger: ATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAATTAAAGATGACCTGCTaGACATTGTCATATGTCTCT +
Preference number: 2 (lower is better)
Translates to: EPSSPGELNFPYLFQLLELKMTC*TLSYVS
Trigger: AGAGACATATGACAATGTTCAGCAGGTCATCTTTAA...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR GCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAACCAGGACTTGGGGGTaGATGAGGCAAACCCCAAGT +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQTRTWG*MRQTPS
Trigger: ACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGT...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 90 bp CTTAGATACTACCTTGCACAGTCATTCCCCTGGACTGGAAGGTCCTaGTTTATAGGGACTTGGTCTGTGTACCCCCTTATCCATCATTCA +
Preference number: 2 (lower is better)
Translates to: LRYYLAQSFPWTGRS*FIGTWSVYPLIHHS
Trigger: TGAATGATGGATAAGGGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 90 bp TTGGCCCCCATGAAATTCACAGATTGGTTGGGGAGATTCCTACTATaGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGGTTAGCA +
Preference number: 2 (lower is better)
Translates to: LAPMKFTDWLGRFLL*CGCPQNKSLRSRLA
Trigger: TGCTAACCGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAATTTCATGGGGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR TCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGATTCTTCCAATCCATaGACATGGAATATCATTCCA +
Preference number: 2 (lower is better)
Translates to: ARPSMENTASTRVYAERGDSSNP*TWNIIP
Trigger: TGGAATGATATTCCATGTTCATGGATTGGAAGAATC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR GCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGATCTCTTTACAATCTaGACAGCCTATTGTGAGTAT +
Preference number: 2 (lower is better)
Translates to: ARPSMENTASTRVYAERGDLFTI*TAYCEY
Trigger: ATACTCACAATAGGCTGTGCAGATTGTAAAGAGATC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR GCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCACACTCTGTGCTTaGTGCAAGCTGCGGAATAGC +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQVTLCA*CKLRNS
Trigger: GCTATTCCGCAGCTTGCAGCAAGCACAGAGTGTGAC...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 90 bp TCCCCTTTGGAAAAAGGTCACAGATGCACAGAAAGGTTAAGTAACTaGCTCAAGGACACACAACCAGTAAGTGGTACTGCCAGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SPLEKGHRCTERLSN*LKDTQPVSGTARKQ
Trigger: TTGCTTCCTGGCAGTACCACTTACTGGTTGTGTGTCCTTGAGCAAGTTACTTAACCTTTCTGTGCATCTGTGACCTTTTTCCAAAGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR CAA 90 bp ATAGACACATATCAAGTGTATTCATGGCCTAGCAAGTTCAAGGGTTaGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: IDTYQVYSWPSKFKG*LREIKQGASRIWQQ
Trigger: TTGCTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGAATACACTTGATATGTGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 90 bp TGCACAGTCATTCCCCTGGACTGGAAGGTCCTTGTTTATAGGGACTaGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAAC +
Preference number: 2 (lower is better)
Translates to: CTVIPLDWKVLVYRD*VCVPPYPSFKYNPN
Trigger: GTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAATGACTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAACTCAGTTCAAATGCTaGTTTGGGCCAGGCACAGTA +
Preference number: 2 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPTQFKC*FGPGTV
Trigger: TACTGTGCCTGGCCCAAAGCAGCATTTGAACTGAGT...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR-3UTR CCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCATTCCCCTGGACTaGAAGGTCCTTGTTTATAGG +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQVIPLD*KVLVYR
Trigger: CCTATAAACAAGGACCTTCCAGTCCAGGGGAATGAC...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR GCA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTAAAAACTCAGTTCAAATaGTGCTTTGGGCCAGGCACA +
Preference number: 2 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLKTQFK*CFGPGT
Trigger: TGTGCCTGGCCCAAAGCAGCATTTGAACTGAGTTTT...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR-3UTR GCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAAAAGTCAGAAACACATaGTGGGGGTTCACAAGCCTT +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQKVRNT*WGFTSL
Trigger: AAGGCTTGTGAACCCCCAGCATGTGTTTCTGACTTT...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAATTGTTTATAGGGACTTaGTCTGTGTACCCCCTTATC +
Preference number: 2 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQLFIGT*SVYPLI
Trigger: GATAAGGGGGTACACAGACCAAGTCCCTATAAACAA...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTCCATCCACACTCCAATaGATCATCTATAGACACATA +
Preference number: 2 (lower is better)
Translates to: TWSVYPLIHHSSIILTWIPSTLQ*IIYRHI
Trigger: TATGTGTCTATAGATGATCCATTGGAGTGTGGATGG...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 90 bp TTCATTCTTCTGCATATGAATATCCAGTCTTCCCAGAACCATTTATaGAAGAGACTGTTCTTTCCCCAATGTATGTTCTTGGCATCTGTC +
Preference number: 2 (lower is better)
Translates to: FILLHMNIQSSQNHL*KRLFFPQCMFLASV
Trigger: GACAGATGCCAAGAACATACATTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCATATGCAGAAGAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCCACATTGTCTGCTGCTaGCATACAGAAATGCTACTG +
Preference number: 2 (lower is better)
Translates to: HEHGISFQFLESTSISLIHIVCC*HTEMLL
Trigger: CAGTAGCATTTCTGTATGTCAGCAGCAGACAATGTG...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR GCA 90 bp CACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTACTCCATGTATTTGCTTTTaGTGGTCCCTCTGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: HLCLQSPLYHPFPHSNFTPCICF*WSLCQK
Trigger: TTTCTGACAGAGGGACCAGCAAAAGCAAATACATGG...AGTAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR CAA 90 bp CAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAATGTATGTTCTaGGCATCTGTCAAAAATGAGTTCATTGTAGATATATGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: QNHLLKRLFFPQCMF*ASVKNEFIVDIWLL
Trigger: CAGAAGCCATATATCTACAATGAACTCATTTTTGACAGATGCCAAGAACATACATTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR-3UTR TCA 90 bp TATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGATGCACAGACCATTTCCCCTTCTTTaGATGGTTAACCTCAATTCT +
Preference number: 2 (lower is better)
Translates to: YDISNVNIPFGKRSQMHRPFPLL*MVNLNS
Trigger: AGAATTGAGGTTAACCATTCAAAGAAGGGGAAATGG...TCTGTGCATCTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR-3UTR GCA 90 bp TATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGATGCACAGAATAGTACCATGTATTTaGTTTTGCTGGTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: YDISNVNIPFGKRSQMHRIVPCI*FCWSLC
Trigger: ACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT...TCTGTGCATCTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR-3UTR CCA 90 bp CCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTATTCCCCTTCTTTGAATaGTTAACCTCAATTCTTTCT +
Preference number: 2 (lower is better)
Translates to: PTYVYSLLFTIPFHIQILFPFFE*LTSILS
Trigger: AGAAAGAATTGAGGTTAACCATTCAAAGAAGGGGAA...TAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR CCA 72 bp AGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTaGCGCGCGCCGCGCGAGAAGCGGGGCTGCGGCTTG +
Preference number: 3 (lower is better)
Translates to: RWPGRTRRRLRR*RAPREKRGCGL
Trigger: CAAGCCGCAGCCCCGCTTCTCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GCGGGCAGCTCGGGCTTCGAGGCCGTCGAGGTGGCCTaGCCGTACGCGGAGACGCCTGAGGCGCTGGCGCGC +
Preference number: 3 (lower is better)
Translates to: AGSSGFEAVEVA*PYAETPEALAR
Trigger: GCGCGCCAGCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGCTGCCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GGGCCGCGGGCAGCTCGGGCTTCGAGGCCGTCGAGGTaGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTGG +
Preference number: 3 (lower is better)
Translates to: GPRAARASRPSR*PGRTRRRLRRW
Trigger: CCAGCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGCTGCCCGCGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp GAGCTCGGCCTCCCTACCTTCTCCAGGCGCGGGTCCTaGTCCTTTTCCGGCCGCCCTCGCTCCGCCCCTTCG +
Preference number: 3 (lower is better)
Translates to: ELGLPTFSRRGS*SFSGRPRSAPS
Trigger: CGAAGGGGCGGAGCGAGGGCGGCCGGAAAAGGAGCAGGACCCGCGCCTGGAGAAGGTAGGGAGGCCGAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp AGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTaGGCTGTCCCAGGTACCCCGCTCCACCCCACCCCC +
Preference number: 3 (lower is better)
Translates to: RDWSRPCGMPKP*AVPGTPLHPTP
Trigger: GGGGGTGGGGTGGAGCGGGGTACCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CCGTCCCCGGGAGACAGGCGGCCTTCCGAGAGGGACTaGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: PSPGDRRPSERD*SRPCGMPKPWA
Trigger: AGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCTCCCGGGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp GGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATaGCAAAGCCCTGGGCTGTCCCAGGTACCCCGCTCC +
Preference number: 3 (lower is better)
Translates to: GLPRGTGAGRAV*QSPGLSQVPRS
Trigger: GGAGCGGGGTACCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp CATTGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTaGTTCGCGTCCGGCTCTCAGGCCCTGGAGCTCGGC +
Preference number: 3 (lower is better)
Translates to: HCNRALGQPALS*FASGSQALELG
Trigger: GCCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GGCTGTGAGTATCAGCCTCGAGGTGAGGCGTGGCCCTaGGGAAGGGAGCTCTGGAGGGACCCGGACAGGGGC +
Preference number: 3 (lower is better)
Translates to: GCEYQPRGEAWP*GRELWRDPDRG
Trigger: GCCCCTGTCCGGGTCCCTCCAGAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATACTCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAAGGCAGAGCTGGGATaGGAACCCAGGTGTCATCTC +
Preference number: 3 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRKAELG*EPRCHL
Trigger: GAGATGACACCTGGGTTCCAATCCCAGCTCTGCCTT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCCTGGACCCCACATTaGTCCACATCTGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAWTPH*STSVPR
Trigger: CCTGGGGACAGATGTGGACAAATGTGGGGTCCAGGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCATGCAGCTGGGGTTTaGGCTCAGGTGAGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRHAAGV*AQVRKV
Trigger: CACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CAGCTCTCTCTTGCTTCGCGTCCGGCTCTCAGGCCCTaGAGCTCGGCCTCCCTACCTTCTCCAGGCGCGGGT +
Preference number: 3 (lower is better)
Translates to: QLSLASRPALRP*SSASLPSPGAG
Trigger: ACCCGCGCCTGGAGAAGGTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp TGGGTGCTGCCGACTGCTTGCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCCTCGGCACCTGGAACG +
Preference number: 3 (lower is better)
Translates to: WVLPTACSFGIP*TPSSGPSAPGT
Trigger: CGTTCCAGGTGCCGAGGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp TCTGGAGTCCTGGATGGGTCAGTGGCTGTGGGTGTTTaGGGAGGGCGGTTCCTGCTGCCAGGCTGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: SGVLDGSVAVGV*GGRFLLPGWGS
Trigger: GCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCAGGACTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp TCTGGAGGGACCCGGACAGGGGCTGTTTTCTCCTTGTaGGCTGAGGTGCCGAGGCCTCCCTCTCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SGGTRTGAVFSL*AEVPRPPSPCR
Trigger: CCTGCAGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGCCCCTGTCCGGGTCCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GTGCTGGGATACCTGGGCATCGTGACCCAGGTGCCATaGACTGGAGACCTGGGGAGACGGACGAGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: VLGYLGIVTQVP*TGDLGRRTRAG
Trigger: GCCAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCACGATGCCCAGGTATCCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGAAGTTGAGTGTTCCTaGCAAGGGTGCTGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: ARASRPSRWPGRTRRRLREVECS*QGCCGK
Trigger: CTTGCCACAGCACCCTTGCAAGGAACACTCAACTTC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp AGGGACCCGGACAGGGGCTGTTTTCTCCTTGTGGGCTaGGGTGCCGAGGCCTCCCTCTCCCTGCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: RDPDRGCFLLVG*GAEASLSLQET
Trigger: TGTCTCCTGCAGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGCCCCTGTCCGGGTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp CGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTaGCCCCCAGTACTTCCTGGACACGCCCCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: RGTAGAHQHPHH*PPVLPGHAPAG
Trigger: CCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp AGAGGCTGGCCAGTGAGGGCCCGCACACCACCCACGTaGCTCCAGACAGCGAGTGACATCCCATCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: RGWPVRARTPPT*LQTASDIPSPP
Trigger: AGGAGGAGATGGGATGTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCGGGCCCTCACTGGCCAGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp ACATTTGTCCACATCTGTCCCCAGGGCATGTGCAGGTaGCACAGGTCCCAGGCCGAGGGGAGCCCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: TFVHICPQGMCR*HRSQAEGSPAA
Trigger: GGCTGCTGGGCTCCCCTCGGCCTGGGACCTGTGCCACCTGCACATGCCCTGGGGACAGATGTGGACAAATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGGGAGTTCCTGCCCATaGTTGGTGAGAGGACCTTCC +
Preference number: 3 (lower is better)
Translates to: REGLEQAVRYAKALGCPRGSSCP*LVRGPS
Trigger: GGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp TGGGAGCCATGGCCCGGCGAGGACTTAGGTCAACACTaGAGGCACTCACCGGAAGATGAGGTCTCGGGGCGC +
Preference number: 3 (lower is better)
Translates to: WEPWPGEDLGQH*RHSPEDEVSGR
Trigger: GCGCCCCGAGACCTCATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTCCTCGCCGGGCCATGGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 72 bp GGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTaGTGCCAGGCTGGGGCAGCAGACCCTCAAGACATA +
Preference number: 3 (lower is better)
Translates to: GQWLWVFGEGGS*CQAGAADPQDI
Trigger: TATGTCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp AGCACCCGACATGCTGCTAGGAGGACCTCGTGGGACTaGTGGAGCCCATCAACACCCGCATCACTGACCCCC +
Preference number: 3 (lower is better)
Translates to: STRHAARRTSWD*WSPSTPASLTP
Trigger: GGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGCAGCATGTCGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GCTGCTGAAGGGCCCAGGGCTGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACA +
Preference number: 3 (lower is better)
Translates to: AAEGPRAERTRT*GCMRQTPSVAT
Trigger: TGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTCAGCCCTGGGCCCTTCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp ACTCAGTGTCTGGCTTGCCCTGGGGCCCAGAAGGGCTaGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGC +
Preference number: 3 (lower is better)
Translates to: TQCLACPGAQKG*SVLPLAGNLVG
Trigger: GCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTCTGGGCCCCAGGGCAAGCCAGACACTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CCTGACTCTCTGGAGTCCTGGATGGGTCAGTGGCTGTaGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: PDSLESWMGQWL*VFGEGGSCCQA
Trigger: AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCAGGACTCCAGAGAGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCAGGTGCTGCCGACTGCTaGCTCCTTCGGGATCCCATG +
Preference number: 3 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAGAADC*LLRDPM
Trigger: CATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACC...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTTAGCAGGTTACAGGTaGCGGAGAAGGACCGAGGGA +
Preference number: 3 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALAGYR*RRRTEG
Trigger: TCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GGCCCAGGGCTGAGAGGACCAGGACTTGGGGGTGCATaGGGCAAACCCCAAGTGTGGCCACACAATGCAAGG +
Preference number: 3 (lower is better)
Translates to: GPGLRGPGLGGA*GKPQVWPHNAR
Trigger: CCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTCAGCCCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGTGGCTGTGGGTGTTaGGGGAGGGCGGTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSGCGC*GRAVPA
Trigger: AGCAGGAACCGCCCTCCCCAAACACCCACAGCCACT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAGTAGAGGGCTTGAGTaGGCTACGTTCATACTGGGA +
Preference number: 3 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSRGLE*ATFILG
Trigger: TCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGCATGCAGCTGGGGTTTaGGCTCAGGTGAGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKHAAGV*AQVRKV
Trigger: CACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATG...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTATACAGTGATGCATTaGAGGACAGGCCTATTCCAG +
Preference number: 3 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPYTVMH*RTGLFQ
Trigger: CTGGAATAGGCCTGTCCTCAAATGCATCACTGTATA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GGACTTAGGTCAACACTGAAGGCACTCACCGGAAGATaGGGTCTCGGGGCGCCTGAGGGGGCTGCATGCCAA +
Preference number: 3 (lower is better)
Translates to: GLRSTLKALTGR*GLGAPEGAACQ
Trigger: TTGGCATGCAGCCCCCTCAGGCGCCCCGAGACCTCATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 72 bp CAAGGCCTCCAGTCCATCTTCCCCACAGGATCCACCTaGTGGCTGGCCGAGTACCCCAGGGAGCTGATCGAA +
Preference number: 3 (lower is better)
Translates to: QGLQSIFPTGST*WLAEYPRELIE
Trigger: TTCGATCAGCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGGGAAGATGGACTGGAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GGCCCGCACACCACCCACGTGCCTCCAGACAGCGAGTaGCATCCCATCTCCTCCTCTGCATTAAAGATGACC +
Preference number: 3 (lower is better)
Translates to: GPHTTHVPPDSE*HPISSSALKMT
Trigger: GGTCATCTTTAATGCAGAGGAGGAGATGGGATGTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp GGAGACTGCTGCCTGTGCCAAATTGGTGAGGAAGGCTaGATGGGAGTCCGTGAGCCGGCGACAAAGCACTAC +
Preference number: 3 (lower is better)
Translates to: GDCCLCQIGEEG*MGVREPATKHY
Trigger: GTAGTGCTTTGTCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCACCAATTTGGCACAGGCAGCAGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 72 bp TACTTACATGTCTCTGTGGGTGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGTGAGGCTGCCAGCCTA +
Preference number: 3 (lower is better)
Translates to: YLHVSVGVRRRG*TVGTAREAASL
Trigger: TAGGCTGGCAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCACACCCACAGAGACATGTAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp ACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTaGGTGCTGCCGACTGCTTGCTCCTTCGGGATCCCA +
Preference number: 3 (lower is better)
Translates to: TLREVKAESPVA*VLPTACSFGIP
Trigger: TGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp CCTCTCCCTGCAGGAGACACAGTAGAGGGCTTGAGTTaGCTACGTTCATACTGGGATAGGCGGGGCCACCCA +
Preference number: 3 (lower is better)
Translates to: PLPAGDTVEGLS*LRSYWDRRGHP
Trigger: TGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTCTCCTGCAGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp ATTCACAGCACCCGACATGCTGCTAGGAGGACCTCGTaGGACTGCTGGAGCCCATCAACACCCGCATCACTG +
Preference number: 3 (lower is better)
Translates to: IHSTRHAARRTS*DCWSPSTPASL
Trigger: CAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGCAGCATGTCGGGTGCTGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTAGGCTTTGTCTCCTCTaGAGGGGGTCCCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGRLCLL*RGSLQA
Trigger: GGCCTGGAGGGACCCCCTCAAGAGGAGACAAAGCCT...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGCTCTAGGGGGTGTTaGCCACCCTGTGTGAACTCC +
Preference number: 3 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSSRGC*PPCVNS
Trigger: GGAGTTCACACAGGGTGGCAAACACCCCCTAGAGCT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCTGCTTCCCTCCCATaGAGAAGCCAGTGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHAASLP*RSQCQG
Trigger: ACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGCCTGGACCCCACATTaGTCCACATCTGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSAWTPH*STSVPR
Trigger: CCTGGGGACAGATGTGGACAAATGTGGGGTCCAGGC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTTGATTCCTGTGCTCTaGAGGCTCACGGTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLIPVL*RLTVPS
Trigger: GGAGGGGACCGTGAGCCTCAAGAGCACAGGAATCAA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTTGATGGGCAGGAAGTaGAGTGTTCCTTGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGLMGRK*SVPCKG
Trigger: ACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GAGTCGAGGACGCCAGATCTGAGACGCTCAGAAGTCTaGGCCCACTGGTTTATCTCTGCCTCTGCGGTCCTG +
Preference number: 3 (lower is better)
Translates to: ESRTPDLRRSEV*AHWFISASAVL
Trigger: CAGGACCGCAGAGGCAGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp GGTCCGAGAGCAAAGGGACTTGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGGATTGGAACCCAGGTG +
Preference number: 3 (lower is better)
Translates to: GPRAKGLDGGHK*FKGRAGIGTQV
Trigger: CACCTGGGTTCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGCTCTCGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp ACTGCTGCCTGTGCCAAATTGGTGAGGAAGGCTGCATaGGAGTCCGTGAGCCGGCGACAAAGCACTACTGCT +
Preference number: 3 (lower is better)
Translates to: TAACAKLVRKAA*ESVSRRQSTTA
Trigger: AGCAGTAGTGCTTTGTCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCACCAATTTGGCACAGGCAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp GTTGGGATGGGGAGGCCTGGAATGTCTGCTTGGAGCTaGATGTGGCTAAGATCAGGGGATGATGGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: VGMGRPGMSAWS*MWLRSGDDGRR
Trigger: CCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCTCCAAGCAGACATTCCAGGCCTCCCCATCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAAGCTCTAGGGGGTGTTaGCCACCCTGTGTGAACTCC +
Preference number: 3 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGSSRGC*PPCVNS
Trigger: GGAGTTCACACAGGGTGGCAAACACCCCCTAGAGCT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGGGAGTTCCTGCCCATaGTTGGTGAGAGGACCTTCC +
Preference number: 3 (lower is better)
Translates to: RKDSVLKCASHHCNRALGGSSCP*LVRGPS
Trigger: GGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTTAGCAGGTTACAGGTaGCGGAGAAGGACCGAGGGA +
Preference number: 3 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLAGYR*RRRTEG
Trigger: TCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp AGGATGAGAAACCCAGGGTCCGAGAGCAAAGGGACTTaGCGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: RMRNPGSESKGT*RWPQVLQRQSW
Trigger: CCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGCTCTCGGACCCTGGGTTTCTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTaGAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTGC +
Preference number: 3 (lower is better)
Translates to: RKDSVLKCASHH*NRALGQPALSC
Trigger: GCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTaGAACCCAGGTGTCATCTCGATGGGAATGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RWPQVLQRQSWD*NPGVISMGMSS
Trigger: GCTGGACATTCCCATCGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GCTTCTCAGGTGCTTAGATACTACCTTGCACAGTCATTCCCCTGGACTGGAAGGGGGGGTTCACAAGCCTaGCATAGCAGCGCCACTGAG +
Preference number: 3 (lower is better)
Translates to: ASQVLRYYLAQSFPWTGRGGSQA*HSSATE
Trigger: CTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCCC...CCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAGCACCTGAGAAGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTGTGTGTACTTATTTCTaGGCTGGGAGCCATGGCCCG +
Preference number: 3 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGVCTYF*AGSHGP
Trigger: CGGGCCATGGCTCCCAGCCAAGAAATAAGTACACAC...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGTGGCTGTGGGTGTTaGGGGAGGGCGGTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASGCGC*GRAVPA
Trigger: AGCAGGAACCGCCCTCCCCAAACACCCACAGCCACT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp CTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGACAGGACACCGGGTCCG +
Preference number: 3 (lower is better)
Translates to: LHANHLFPQRFQ*TAVDVDRTPGP
Trigger: CGGACCCGGTGTCCTGTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 72 bp CCTGATGCAGGTTCAGGGAGTCGAGGACGCCAGATCTaGGACGCTCAGAAGTCTGAGCCCACTGGTTTATCT +
Preference number: 3 (lower is better)
Translates to: PDAGSGSRGRQI*DAQKSEPTGLS
Trigger: AGATAAACCAGTGGGCTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCGACTCCCTGAACCTGCATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp CTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTaGGGAGAAGGACTGAAGGTGGGCAAGCATCTGGTC +
Preference number: 3 (lower is better)
Translates to: LGAVRKREMLRH*GEGLKVGKHLV
Trigger: GACCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR TCA 72 bp AGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGGAGAAGGACTGAAGGT +
Preference number: 3 (lower is better)
Translates to: RVALRSWCCQEA*NAQALRRRTEG
Trigger: ACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR GCA 72 bp CTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGTaGTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: LDGQEVECSLQG*CGKRRPGVFGS
Trigger: GCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp GGGCATTGCTTGATGGGCAGGAAGTTGAGTGTTCCTTaGAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTAT +
Preference number: 3 (lower is better)
Translates to: GHCLMGRKLSVP*KGAVARGGLVY
Trigger: ATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CTGCCCACGCCTATTAGTGTGTACTTATTTCTTGGCTaGGAGCCATGGCCCGGCGAGGACTTAGGTCAACAC +
Preference number: 3 (lower is better)
Translates to: LPTPISVYLFLG*EPWPGEDLGQH
Trigger: GTGTTGACCTAAGTCCTCGCCGGGCCATGGCTCCCAGCCAAGAAATAAGTACACACTAATAGGCGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp GGCAGAGCTGGGATTGGAACCCAGGTGTCATCTCGATaGGAATGTCCAGCAGTGATGTCCAAGTGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: GRAGIGTQVSSR*ECPAVMSKWEV
Trigger: CACTTCCCACTTGGACATCACTGCTGGACATTCCCATCGAGATGACACCTGGGTTCCAATCCCAGCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp TTCAACTGCTGGAAGATGAAGGCTACAAAGGCTTCGTaGGCTGTGAGTATCAGCCTCGAGGTGAGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: FNCWKMKATKAS*AVSISLEVRRG
Trigger: GCCACGCCTCACCTCGAGGCTGATACTCACAGCCCACGAAGCCTTTGTAGCCTTCATCTTCCAGCAGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTaGCAAGAGGGGATCACTACTGGTCAATGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: QILQRPNRLRRN*QEGITTGQWWG
Trigger: CCCCCACCATTGACCAGTAGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGCTGCTTCCCTCCCATaGAGAAGCCAGTGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAAASLP*RSQCQG
Trigger: ACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAGC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GACAGGAAACATCCGGGAGTTCCTGCCCATTGTTGGTaGGAGGACCTTCCTTTGCCCTCCCACCCTTTCAAT +
Preference number: 3 (lower is better)
Translates to: DRKHPGVPAHCW*EDLPLPSHPFN
Trigger: ATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCCGGATGTTTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp AGATGTCTGGGAAAGGGCTTGCCCCTCAGCCATCACTaGAGTGTCTCTGAAAGTGCTGGGATACCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: RCLGKGLPLSHH*SVSESAGIPGH
Trigger: ATGCCCAGGTATCCCAGCACTTTCAGAGACACTTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp GGAAGCGTGAAATGCTCAGGCACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGGTCTGTCTGGTTGATG +
Preference number: 3 (lower is better)
Translates to: GSVKCSGTEEKD*RWASIWSVWLM
Trigger: CATCAACCAGACAGACCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTCACGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR GCA 72 bp GTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTaGTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: VFTALRFSNHEQ*SFVRRASKESP
Trigger: GGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTaGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGG +
Preference number: 3 (lower is better)
Translates to: GRKTQPPITNGK*KGVLRRSEGGR
Trigger: CCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp GGAGGCCGTTTTTCTGGAGAACCTGAGGCATGCAGCTaGGGTTTTGGCTCAGGTGAGAAAGGTGGAAACACA +
Preference number: 3 (lower is better)
Translates to: GGRFSGEPEACS*GFGSGEKGGNT
Trigger: TGTGTTTCCACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATGCCTCAGGTTCTCCAGAAAAACGGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp TATCTGTCTTATGCCACTCTGTTTGCCACTCTTTCATaGTCACCCCATGCTGGGATCCCATGCTGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: YLSYATLFATLS*SPHAGIPCWEL
Trigger: GAGCTCCCAGCATGGGATCCCAGCATGGGGTGAGCATGAAAGAGTGGCAAACAGAGTGGCATAAGACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGACACAGTAGAGGGCTaGAGTTGGCTACGTTCATAC +
Preference number: 3 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGDTVEG*SWLRSY
Trigger: GTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAGGAGTGGGCATTGCTaGATGGGCAGGAAGTTGAGT +
Preference number: 3 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSRSGHC*MGRKLS
Trigger: ACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR TCA 72 bp TGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTaGTTCTGGGCATTGTCACTAGCCAGGGTCACACTG +
Preference number: 3 (lower is better)
Translates to: CKSRRNGGLSSP*FWALSLARVTL
Trigger: CAGTGTGACCCTGGCTAGTGACAATGCCCAGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 72 bp AGGACATATTCCACTGGCAGATCATGGATGGGAACCTaGCAGGAAACATCCGGGAGTTCCTGCCCATTGTTG +
Preference number: 3 (lower is better)
Translates to: RTYSTGRSWMGT*QETSGSSCPLL
Trigger: CAACAATGGGCAGGAACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp TTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATaGCAGCAACTTACCTGCCCACGCCTATTAGTGTGT +
Preference number: 3 (lower is better)
Translates to: LLREIKQGASRI*QQLTCPRLLVC
Trigger: ACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 72 bp GTAGTGATGCTTGGACTGTCTTCAAGGAGTGGGCATTaGTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAAG +
Preference number: 3 (lower is better)
Translates to: VVMLGLSSRSGH*LMGRKLSVPCK
Trigger: CTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CCA 72 bp ATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATaGGTACGATACAATGAACGAATGGGCTGCCTTAGT +
Preference number: 3 (lower is better)
Translates to: MLCSVFQKRRIT*VRYNERMGCLS
Trigger: ACTAAGGCAGCCCATTCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR-3UTR CAA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGTCCCAGAACCATTTATaGAAGAGACTGTTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: ARPSMENTASTRVYAERGSQNHL*KRLFFP
Trigger: GGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGA...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR GCA 72 bp AAGCAAGGAGCCAGCAGGATATGGCAGCAACTTACCTaGCCACGCCTATTAGTGTGTACTTATTTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: KQGASRIWQQLT*PRLLVCTYFLA
Trigger: AGCCAAGAAATAAGTACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCATATCCTGCTGGCTCCTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 72 bp GCCTCCAGACAGCGAGTGACATCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTGAACATTGTCATATGT +
Preference number: 3 (lower is better)
Translates to: ASRQRVTSHLLL*IKDDLLNIVIC
Trigger: ACATATGACAATGTTCAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGATGTCACTCGCTGTCTGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR GCA 72 bp CGGATAACATGGGTACGATACAATGAACGAATGGGCTaGCTTAGTGCACAGGACACATCATGCAAAATGTCG +
Preference number: 3 (lower is better)
Translates to: RITWVRYNERMG*LSAQDTSCKMS
Trigger: CGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATTGTATCGTACCCATGTTATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
3UTR CCA 72 bp TTCCCCTGGACTGGAAGGTCCTTGTTTATAGGGACTTaGTCTGTGTACCCCCTTATCCATCATTCAAGTATA +
Preference number: 3 (lower is better)
Translates to: FPWTGRSLFIGT*SVYPLIHHSSI
Trigger: TATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CCA 72 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTaGATGTCCTCAGAACAAGTCTCTACGTTCACGGTT +
Preference number: 3 (lower is better)
Translates to: IHRLVGEIPTIV*MSSEQVSTFTV
Trigger: AACCGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCCATGAAATTCACAGATaGGTTGGGGAGATTCCTACT +
Preference number: 3 (lower is better)
Translates to: SSNLGVISISILLVLLFPHEIHR*VGEIPT
Trigger: AGTAGGAATCTCCCCAACCAATCTGTGAATTTCATG...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR-3UTR CAA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAAGATTTCTTCTTCACATaGTCTGCTGCTGACATACAG +
Preference number: 3 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQDFFFT*SAADIQ
Trigger: CTGTATGTCAGCAGCAGACAATGTGAAGAAGAAATC...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR CCA 72 bp AATGGATCATCTATAGACACATATCAAGTGTATTCATaGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATC +
Preference number: 3 (lower is better)
Translates to: NGSSIDTYQVYS*PSKFKGLLREI
Trigger: GATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGAATACACTTGATATGTGTCTATAGATGATCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR TCA 72 bp CTTTCCCCAATGTATGTTCTTGGCATCTGTCAAAAATaGGTTCATTGTAGATATATGGCTTCTGGGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSPMYVLGICQK*VHCRYMASGFS
Trigger: AGAGAACCCAGAAGCCATATATCTACAATGAACTCATTTTTGACAGATGCCAAGAACATACATTGGGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR GCA 72 bp GTGATCCTATTTGTCCATTTTTGCTTTGCACGCTTGTaGTTGCAGGGTATTATCAATAAATCTTTGAGCCAA +
Preference number: 3 (lower is better)
Translates to: VILFVHFCFARL*LQGIINKSLSQ
Trigger: TTGGCTCAAAGATTTATTGATAATACCCTGCAAGCACAAGCGTGCAAAGCAAAAATGGACAAATAGGATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR TCA 72 bp TTAACTTTCATATTTCTTGATGGATGGGGATTTCTATaGAACAGAGTAGCGATAACTCCCAGTTTTCTGACT +
Preference number: 3 (lower is better)
Translates to: LTFIFLDGWGFL*NRVAITPSFLT
Trigger: AGTCAGAAAACTGGGAGTTATCGCTACTCTGTTTCATAGAAATCCCCATCCATCAAGAAATATGAAAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR GCA 72 bp TGGTATTTTGATAGGAATTGTACTGAATCTGTAGACTaGTTTAGGCAGTGTGGGCATTTTAACAATACTGAT +
Preference number: 3 (lower is better)
Translates to: WYFDRNCTESVD*FRQCGHFNNTD
Trigger: ATCAGTATTGTTAAAATGCCCACACTGCCTAAAGCAGTCTACAGATTCAGTACAATTCCTATCAAAATACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCGGCCTCCCCAGGCATaGCGCCGCTGCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRPPQA*RRCASP
Trigger: CGGAGAAGCGCAGCGGCGCCATGCCTGGGGAGGCCG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTCCGAGCCGGGGGCTaGGGCCCGTTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVRAGG*GPFSLQ
Trigger: CTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCGCAGGGGCCAGTCCTaGCGGGACACTCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRRGQS*RDTPKP
Trigger: TGGCTTTGGAGTGTCCCGTCAGGACTGGCCCCTGCG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTATCAGCCTCGAGGTaGGGCGTGGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVSASR*GVALGK
Trigger: CTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGCTGCGGCTTGTACTaGTCAACACGCCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGCGLY*STRPRV
Trigger: CACCCGGGGGCGTGTTGATCAGTACAAGCCGCAGCC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGTGTCCCGACGGCAGTaGCCTCCAGCCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPVSRRQ*PPASRT
Trigger: GGTGCGGCTGGCTGGAGGGCACTGCCGTCGGGACAC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCAGATGCCGCTCAGCTaGAGGGCGGGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPQMPLS*RAGRGA
Trigger: GGCCCCTCTCCCCGCCCTGCAGCTGAGCGGCATCTG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTGCGCGTCCCATCATTaGAACCGGGCCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRCASHH*NRALGQ
Trigger: CTGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCA...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCTGGGCAATGGCACTaGGAGGCAGCGCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAGQWH*EAAQGP
Trigger: TGGCCCCTGCGCTGCCTCTCAGTGCCATTGCCCAGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCTCCTGTGGCCTGGGTaGTGCCGACTGCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRLLWPG*CRLLAP
Trigger: AGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVRRRG*TVGTAR
Trigger: ACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCGCCTCACCAGGAGCTaGTGCAGGTGGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRLTRS*CRWRHS
Trigger: TGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGAGGGTCCGAGGCCGTaGGGAGCTCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPEGPRP*GAPLPG
Trigger: CCCTGGAAGTGGAGCTCCCCACGGCCTCGGACCCTC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGCTCCCATCACCTCCTaGCTCGAAGCGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRAPITS*LEALHG
Trigger: GCCATGCAGCGCTTCGAGCCAGGAGGTGATGGGAGC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAGTGGGGACAGCACGTaGGGCTGCCAGCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRSGDST*GCQPRS
Trigger: TGACCTAGGCTGGCAGCCTCACGTGCTGTCCCCACT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCAGCCAGCTCTCTCTTaGTTCGCGTCCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRQPALS*FASGSQ
Trigger: CTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTGCCGGGCCGGTGCTaGTGTGCCAATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVPGRC*CANGKT
Trigger: GGTTTTCCCATTGGCACACCAGCACCGGCCCGGCAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTGGCCCCTCGGCACCTaGAACGTGGCAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHWPLGT*NVAGPP
Trigger: CGGCGGACCTGCCACGTTCCAGGTGCCGAGGGGCCA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCATACTCGTTGTGTTCTaGGCCCCCTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRILVVF*APWPGH
Trigger: ATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTAT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAGGGGGCAGTCTGGGTaGCTTCCGGAAGCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPRGQSG*LPEAAH
Trigger: ATGCGCCGCTTCCGGAAGCCACCCAGACTGCCCCCT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCCAGGTGGTGGTAGGTaGAGACCAGTTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRPGGGR*RPVGQG
Trigger: CCCCTGCCCAACTGGTCTCCACCTACCACCACCTGG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAGGATTCACAGCTTGTaGGGGCCTCTCGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRIHSL*GPLGSQ
Trigger: CTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGCTGGGATCCCATGCTaGGAGCTCAGTCTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRAGIPC*ELSLPR
Trigger: CCTAGGCAGACTGAGCTCCCAGCATGGGATCCCAGC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGACTTGGGGGTGCATaGGGCAAACCCCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGLGGA*GKPQVW
Trigger: CCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGAGGGCCTTGACCAGTaGCTGACTGATGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRREGLDQ*LTDGGQ
Trigger: TTGTCCCCCATCAGTCAGTCACTGGTCAAGGCCCTC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTGGGTAGGGCCAGATaGAGCACCTCTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVGRAR*STSEGR
Trigger: TCTCCCCTCAGAGGTGCTGCATCTGGCCCTACCCAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAGGCCTCCCTCTCCCTaGAGGAGACACAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRRPPSP*RRHSRG
Trigger: CCCTCTACTGTGTCTCCTGCAGGGAGAGGGAGGCCT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCACCTCCTTCTCAGTGTaGTTCTTCCGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRTSFSV*FFRRKA
Trigger: GGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAGGATGGAGAGGAGCTaGGCAATGGCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRMERS*AMALRG
Trigger: GCCTCTCAGTGCCATTGCCCAGCTCCTCTCCATCCT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCAGGCAGCATCCCGTaGGTGGAGAGCTTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAGSIP*VESLRD
Trigger: ATCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGGTCCGTCAGGGTGGTaGGCCAGGAAGTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPGPSGW*ARKCRR
Trigger: TCTGCGACACTTCCTGGCCCACCACCCTGACGGACC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGGTGAGGCGTGGCCCTaGGGAAGGGAGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHGEAWP*GRELWR
Trigger: CCTCCAGAGCTCCCTTCCCCAGGGCCACGCCTCACC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGACCCTCAGAATCCTCTaGGGACCCAGGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRTLRIL*GPRCLG
Trigger: CCCCAAGCACCTGGGTCCCCAGAGGATTCTGAGGGT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCTCTCGCAGTGGGTCTaGGGGCCCCGGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPLSQWV*GPRRGG
Trigger: CCCTCCTCTCCGGGGCCCCCAGACCCACTGCGAGAG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCTCCCATCACCTCCTaGCTCGAAGCGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAPITS*LEALHG
Trigger: GCCATGCAGCGCTTCGAGCCAGGAGGTGATGGGAGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGGTCTCCACTTCCATaGTCGGCAGCAGGAATGGGT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGSPLP*SAAGMG
Trigger: ACCCATTCCTGCTGCCGACCATGGAAGTGGAGACCC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTCGAGGCCGTCGAGGTaGCCTGGCCGTACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSRPSR*PGRTRR
Trigger: TCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCGGCCCGGGCCAGTaGGGGTGTTCCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPAGPGQ*GCSTLD
Trigger: GTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGGGCCACAACGCCAGTaGCAAGGGGGCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAGPQRQ*QGGPSF
Trigger: GAAGGAGGGGCCCCCTTGTCACTGGCGTTGTGGCCC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTCGGCTCCCAGACCCTaGCTCAGGGCGATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQASAPRP*LRAMAP
Trigger: CGGCGCCATCGCCCTGAGTCAGGGTCTGGGAGCCGA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGTAGCGCCCATTGCTaGCCGGGGTGTGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCSAHC*PGCASA
Trigger: AGCACTTGCACACCCCGGGCAGCAATGGGCGCTACA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGACTAGTACGAAGCTaGTCCAGTCCCGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRRLVRS*SSPAAE
Trigger: CTCTGCTGCGGGACTGGAGCAGCTTCGTACTAGTCG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCCTGACACAATCTTGTaGCGGGCCGGTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPPDTIL*RAGAGV
Trigger: CACACCAGCACCGGCCCGGCACAAGATTGTGTCAGG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCGTGGGTGGAGAGCTTaGGGGATCTCAGAATACGTC +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRGWRA*GISEYV
Trigger: GACGTATTCTGAGATCCCGCAAGCTCTCCACCCACG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTGTGCATGCTCCTaGAGCAGGGCACAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRRCACS*SRAQWL
Trigger: TAACCACTGTGCCCTGCTGCAGGAGCATGCACAGCG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGAGGTCACACTCTGTaGTTGCTGCAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGGHTL*LLQAAE
Trigger: TTCCGCAGCTTGCAGCAAGCACAGAGTGTGACCTCC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGTGGGTAGGGCCAGATaGAGCACCTCTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPVGRAR*STSEGR
Trigger: TCTCCCCTCAGAGGTGCTGCATCTGGCCCTACCCAC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGTAGCCGCAGAACGTaGCGCTCAGCCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCSRRT*RSASPC
Trigger: GCAAGGAGAGGCTGAGCGGCACGTTCTGCGGCTACA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCCGTGCTCGTGCCATaGCCACCTCTGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHAVLVP*PPLQPV
Trigger: CACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCTTGTGGGCTGAGGTaGCGAGGCCTCCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPCGLR*RGLPLP
Trigger: AGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTCTGGGAAAGGGCTTaGCCCTCAGCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVWERA*PSAITE
Trigger: TTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTGCGCGTCCCATCATTaGAACCGGGCCCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHCASHH*NRALGQ
Trigger: CTGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTCCTGGGGCTGTACTaGGAAGGGCTCTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVLGLY*EGLSEN
Trigger: GTTTTCCGAGAGCCCTTCCCAGTACAGCCCCAGGAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGTGAGGCGTGGCCCTaGGGAAGGGAGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGEAWP*GRELWR
Trigger: CCTCCAGAGCTCCCTTCCCCAGGGCCACGCCTCACC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTGCCACTGCGAAGCTaGTTCAGCAGTGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVPLRS*FSSVSQ
Trigger: CTGTGAGACACTGCTGAACCAGCTTCGCAGTGGCAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGTGCAGGAAGAGCGGTaGCAGGTCATGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRVQEER*QVMKEA
Trigger: AGCTTCCTTCATGACCTGCCACCGCTCTTCCTGCAC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTTCCTCCTCTCGCAGTaGGTCTGGGGGCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRFLLSQ*VWGPRR
Trigger: TCTCCGGGGCCCCCAGACCCACTGCGAGAGGAGGAA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGATGATGGGAGGAGGTaGACGGCTCAAAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRDDGRR*TAQSGA
Trigger: AGCCCCACTTTGAGCCGTCCACCTCCTCCCATCATC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCGGCCTCCCCAGGCATaGCGCCGCTGCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSRPPQA*RRCASP
Trigger: CGGAGAAGCGCAGCGGCGCCATGCCTGGGGAGGCCG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp TCATTGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTaGCTTCGCGTCCGGCTCTCAGGCCCTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SLQPGPRAASSL*LRVRLSGPGAR
Trigger: CCGAGCTCCAGGGCCTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCCAAGCCAGGAAGGTaGCCCGGGTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHAKPGR*PGWKVP
Trigger: TGGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGAGGTAGCGGGACAGTaGCGCCAGGCTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPREVAGQ*RQARRG
Trigger: GCCTCTTCTAGCCTGGCGTCACTGTCCCGCTACCTC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGGCTGGGCAATGGCACTaGGAGGCAGCGCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GAPEGAACQPFVPSALPVAGQWH*EAAQGP
Trigger: TGGCCCCTGCGCTGCCTCTCAGTGCCATTGCCCAGC...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAASFGIP*TPSSGP
Trigger: GGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGA...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTCCTGGATGACGCTATaGAGGGCACCATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSWMTL*RAPWAS
Trigger: AGAGGCCCATGGTGCCCTTCATAGCGTCATCCAGGA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGTGGAGTCCGCAATGTaGAGGGGGCCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPVESAM*RGPSHQ
Trigger: TTGGTGAGAAGGCCCCCTTCACATTGCGGACTCCAC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGGCAGTGGTGCCCGCTaGCGGGAGTGGAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAGSGAR*REWKGV
Trigger: GACTCCCTTCCACTCCCGTCAGCGGGCACCACTGCC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCCAGCTCTCCAGCACTaGTGGGCATGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPPALQH*WAWWLG
Trigger: CCCCAGCCACCATGCCCATCAGTGCTGGAGAGCTGG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTCGCTGCCAGGAATTTaGATCCATGGACAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRSLPGI*IHGQHW
Trigger: CCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGA...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGACTTGGAGGGAGAGCTaGCCCCACCAGCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRTWRES*PHQHPL
Trigger: TAGGGGGTGCTGGTGGGGGCAGCTCTCCCTCCAAGT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTGTGAGTTGACAGCCTaGCCCATTGGGATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRCELTA*PIGIRE
Trigger: TTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACA...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTGCTCATATATCTGCTaGAGGAACACCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRCSYIC*RNTSRW
Trigger: CCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCA...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAAGCCACAGTGCCACTaGGAAGCTGGTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRKPQCH*EAGSAV
Trigger: CACTGCTGAACCAGCTTCGCAGTGGCACTGTGGCTT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACACGGAGCACGTGAGGTaGAGGAAGAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHTEHVR*RKSGGR
Trigger: CCTGCCACCGCTCTTCCTGCACCTCACGTGCTCCGT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGACTTCCACACGGTCCTaGAGGACCCGGACAATGAGC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPTSTRS*RTRTMS
Trigger: GCTCATTGTCCGGGTCCTGCAGGACCGTGTGGAAGT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCGCCTCACCAGGAGCTaGTGCAGGTGGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRRLTRS*CRWRHS
Trigger: TGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCAGCGCTCGGCCCAATaGTGCCCCCAGGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAQRSAQ*CPQVWS
Trigger: GCTCCAGACCTGGGGGCAGCATTGGGCCGAGCGCTG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGCTGGGGTAGAACGCTaGTGCCAGGTTACAAACAGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRAGVER*CQVTNR
Trigger: CCTGTTTGTAACCTGGCAGCAGCGTTCTACCCCAGC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCAAGGGCAGTGGACCTaGTGGCTCCAATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRQGQWT*WLQCQQ
Trigger: TTGCTGACATTGGAGCCACCAGGTCCACTGCCCTTG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAGACTTCCAGGGGGCTaGATGAACTCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRLPGG*MNSTSA
Trigger: AGCTGATGTGGAGTTCATCCAGCCCCCTGGAAGTCT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGTGGGCAGCAATGAGTaGTGTGGGGAGCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRVGSNE*CGELQC
Trigger: ACATTGGAGCTCCCCACACCACTCATTGCTGCCCAC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCACCTCTGCAGCCAGTaGTGGGAACAGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRHLCSQ*WEQRSR
Trigger: CCGGCTCCTCTGTTCCCACCACTGGCTGCAGAGGTG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCAGGTGGTGGTAGGTaGAGACCAGTTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPGGGR*RPVGQG
Trigger: CCCCTGCCCAACTGGTCTCCACCTACCACCACCTGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGGGCCCAGAAGGGCTaGTCAGTCCTGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGAQKG*SVLPLA
Trigger: TGCCAGAGGCAGGACTGACCAGCCCTTCTGGGCCCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCTCAAGGGACACAGGTaGCTGACAGTGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRLKGHR*LTVVKG
Trigger: GCCTTTGACCACTGTCAGCCACCTGTGTCCCTTGAG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAGGCAGAGCTGGGATTaGAACCCAGGTGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRRQSWD*NPGVIS
Trigger: CGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGCTGCTGCAGCATGGTaGCCACCTTATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRAAAAW*PPYPQR
Trigger: TCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCAGGTGCTTGGGGGCTaGCTGTCAGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHQVLGG*LSGSPL
Trigger: AAGGGGAGACCCTGACAGCCAGCCCCCAAGCACCTG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGACTCCCTCCCTGTaGCACGCGGGGCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALTPSL*HAGQAD
Trigger: ATCAGCCTGCCCCGCGTGCCACAGGGAGGGAGTCAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAGGAGCTGCTGCAGGTaGCGACACTCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPRSCCR*RHSVPG
Trigger: GCCGGGCACTGAGTGTCGCCACCTGCAGCAGCTCCT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGATGCTCACCCCATGCTaGGATCCCATGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPMLTPC*DPMLGA
Trigger: AGCTCCCAGCATGGGATCCCAGCATGGGGTGAGCAT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGCCGGCCCGGGCCAGTaGGGGTGTTCCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSAGPGQ*GCSTLD
Trigger: GTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTCTGGTCTGTCTGGTTaGTGCTCTGCAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSGLSG*CSAACS
Trigger: GGAACACGCTGCAGAGCATCAACCAGACAGACCAGA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGACCAGATTGAGCTCTaGGTCTCCCTCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHDQIEL*VSLQGL
Trigger: GAGGCCCTGGAGGGAGACTCAGAGCTCAATCTGGTC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGTCGCAGAAAGGTGGTaGGGTGGTAGCCGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAVAERW*GGSRAA
Trigger: TGCGGCACGGCTACCACCTCACCACCTTTCTGCGAC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCACCTCATTAAAGGATaGGAAACCCAGGGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRHLIKG*ETQGPR
Trigger: TCTCGGACCCTGGGTTTCTCATCCTTTAATGAGGTG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGTGGGGACAGCACGTaGGGCTGCCAGCCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKASGDST*GCQPRS
Trigger: TGACCTAGGCTGGCAGCCTCACGTGCTGTCCCCACT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGCCGCACGGAGCACGTaGGGTGCAGGAAGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSAARST*GAGRAV
Trigger: CACCGCTCTTCCTGCACCTCACGTGCTCCGTGCGGC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCATCCAGAGTCACACTaGGGTCCCTCAAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPHPESH*GPSREL
Trigger: GAGTTCCCTTGAGGGACCTCAGTGTGACTCTGGATG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCACACTCTCGGTTTTGTaGCGCCTCCGGCCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKATLSVL*RLRPRV
Trigger: CACTCGGGGCCGGAGGCGTCACAAAACCGAGAGTGT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCTGGGCTCCAGAATCTaGGCCTGGCGCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSLGSRI*AWRPLS
Trigger: GCTGAGCGGGCGCCAGGCTCAGATTCTGGAGCCCAG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATGCACCAGGCGGGATaGCTGCTTCAGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRMHQAG*LLQGLQ
Trigger: CTGGAGACCCTGAAGCAGTCATCCCGCCTGGTGCAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCTCAGGAAGCGTGAAATaGTCAGGCACTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRSGSVK*SGTEEK
Trigger: CTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGA...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCGGGCCGGTGCTGGTGTaGCAATGGGAAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAGPVLV*QWENPG
Trigger: GCCTGGGTTTTCCCATTGGCACACCAGCACCGGCCC...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGCCTGACACAATCTTGTaGCGGGCCGGTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGPDTIL*RAGAGV
Trigger: CACACCAGCACCGGCCCGGCACAAGATTGTGTCAGG...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCTTGGTAAATGTGATTaGGGCCAAAGTGGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRLGKCD*GQSGVR
Trigger: ACGGACCCCACTTTGGCCGCAATCACATTTACCAAG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGCCGTGCTCGTGCCATaGCCACCTCTGCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKAVLVP*PPLQPV
Trigger: CACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGACATCCGGGAGTTCCTaGCCATTGTTGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRTSGSS*PLLVRG
Trigger: TCCTCTCACCAACAATGGGCAGGAACTCCCGGATGT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGTGCGGAGAAGGGGGTaGACAGTGGGGACAGCACGT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAVRRRG*TVGTAR
Trigger: ACGTGCTGTCCCCACTGTGCACCCCCTTCTCCGCAC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCTCTGGGGATCGTACTaGTGCTGCAGCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHLWGSY*CCSMVA
Trigger: GGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTACGCCGGCCCGCTTTaGTGGGTGGAGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAYAGPL*WVESQA
Trigger: AGCCTGTGACTCCACCCAGCAAAGCGGGCCGGCGTA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCAGGCCGTGCGGTATaGCAAAGCCCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAAGRAV*QSPGLS
Trigger: GGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGACTGGAGCAGGCCGTaGGGTATGCCAAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKADWSRP*GMPKPW
Trigger: CCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTCCAGGCGCGGGTCCTaGTCCTTTTCCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSRRGS*SFSGRP
Trigger: AGGGCGGCCGGAAAAGGAGCAGGACCCGCGCCTGGA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCCATGGACCAGCAGCTaGATATGTCTGTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRPWTSS*ICLSTW
Trigger: CCAAGTGGACAGACATATCCAGCTGCTGGTCCATGG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGAGCACCGGGGTGGTaGAGCCTGGAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRAPGW*SLEGCR
Trigger: TCTACATCCCTCCAGGCTCCACCACCCCGGTGCTCT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGAGGTCAGGGAGGAGTaGGAGATCCTGCACTGGATA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPEVREE*EILHWI
Trigger: TATCCAGTGCAGGATCTCCCACTCCTCCCTGACCTC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAGCTGCAGCCTGCCCTaGTGGTTCATTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRSCSLP*WFILNW
Trigger: CCAATTCAGAATGAACCACCAGGGCAGGCTGCAGCT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGAGACCCTCGGCTCTaGGGGCAGAGGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKARDPRL*GQRTPF
Trigger: GAATGGGGTCCTCTGCCCCCAGAGCCGAGGGTCTCT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCACCTCTGCAGCCAGTaGTGGGAACAGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPHLCSQ*WEQRSR
Trigger: CCGGCTCCTCTGTTCCCACCACTGGCTGCAGAGGTG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGTCGATGTCCCCAATaGATTTGGCATGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGRCPQ*IWHGLL
Trigger: AAGCAGTCCATGCCAAATCCATTGGGGACATCGACC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGTGGCTGTGGGTGTTTaGGGAGGGCGGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAVAVGV*GGRFLL
Trigger: CAGCAGGAACCGCCCTCCCCAAACACCCACAGCCAC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGATCCACCTGATGGCTaGCCGAGTACCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKADPPDG*PSTPGS
Trigger: GCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGACAGTCAGGGAATCCTaGAAGAGGTGCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRTVRES*KRCRES
Trigger: GCTCTCTCTGCACCTCTTCCAGGATTCCCTGACTGT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGAGACGGACGAGGGCTaGCACAGTCAGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHETDEG*HSQGIL
Trigger: CAGGATTCCCTGACTGTGCCAGCCCTCGTCCGTCTC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGACTGGAAAGCACCTaGCCCAGGCAGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRLEST*PRQVGR
Trigger: CCTGCCTACCTGCCTGGGCCAGGTGCTTTCCAGTCT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTACAGAGCGCAGGGCCTaGATGGCCCGAGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSTERRA*MARETP
Trigger: GGGGGTCTCTCGGGCCATCCAGGCCCTGCGCTCTGT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCCTGGAATGTCTGCTTaGAGCTGGATGTGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRPGMSA*SWMWLR
Trigger: TCTTAGCCACATCCAGCTCCAAGCAGACATTCCAGG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp AGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTGCTaGCTCCTTCGGGATCCCATGAACCCCCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SGVSCGLGAADC*LLRDPMNPQQW
Trigger: CCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAGACTCCGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCGGACTTAGCTCTCCTTaGTTCTGGGCATTGTCACTA +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRGLSSP*FWALSL
Trigger: TAGTGACAATGCCCAGAATCAAGGAGAGCTAAGTCC...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAAGGGTGCAGCACAGTaGCAGACAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPKGAAQ*QTSRDT
Trigger: TGTGTCTCTGCTTGTCTGTCACTGTGCTGCACCCTT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTCCTCGGGGTTGACCTaGCTCTCTGGAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSSGLT*LSGVLD
Trigger: ATCCAGGACTCCAGAGAGTCAGGTCAACCCCGAGGA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCCAGAGGCTGGCCAGTaGGGGCCCGCACACCACCCA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLPEAGQ*GPAHHP
Trigger: TGGGTGGTGTGCGGGCCCTCACTGGCCAGCCTCTGG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTTTCTCCTTGTGGGCTaGGGTGCCGAGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKFLLVG*GAEASL
Trigger: GAGGGAGGCCTCGGCACCTCAGCCCACAAGGAGAAA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGTATCAGCCTCGAGGTaGGGCGTGGCCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGVSASR*GVALGK
Trigger: CTTCCCCAGGGCCACGCCTCACCTCGAGGCTGATAC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCTGCCCATTGTTGGTaGGAGGACCTTCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPAHCW*EDLPLP
Trigger: GGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGTACGGACACAGTGCTaGCCAAGTCGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPVRTQC*PSRLAP
Trigger: AGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTAC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGGGACACGGGTGCTCTaGAACTCAGGCTCGCTTAGG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAGTRVL*NSGSLR
Trigger: CCTAAGCGAGCCTGAGTTTCAGAGCACCCGTGTCCC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGCTGCGGCTTGTACTaGTCAACACGCCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGCGLY*STRPRV
Trigger: CACCCGGGGGCGTGTTGATCAGTACAAGCCGCAGCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCCGGGGTGTGCAAGTaGTTGGGGATTGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPGVCK*LGIGVS
Trigger: TGACACACCAATCCCCAAGCACTTGCACACCCCGGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTTGTGCCGGGCCGGTaGTGGTGTGCCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALVPGR*WCANGK
Trigger: TTTCCCATTGGCACACCAGCACCGGCCCGGCACAAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAAGATGAGCAAGTTCTaGCGTAGGTACCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRKMSKF*RRYHAR
Trigger: CCTGGCATGGTACCTACGGCAGAACTTGCTCATCTT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGTGAGTTGACAGCCTaGCCCATTGGGATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCELTA*PIGIRE
Trigger: TTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCGCTCAGCCTCTCCTTaGTCCTCAAAGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRRSASP*SSKGAA
Trigger: TGCTGCACCCTTTGAGGAGCAAGGAGAGGCTGAGCG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTGTCCCCAGGGCATGTaGAGGTGGCACAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQACPQGM*RWHRSQ
Trigger: CTGGGACCTGTGCCACCTGCACATGCCCTGGGGACA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAGGACCTCGTGGGACTaGTGGAGCCCATCAACACCC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPRTSWD*WSPSTP
Trigger: GGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGCTCATATATCTGCTaGAGGAACACCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCSYIC*RNTSRW
Trigger: CCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTGGGGATCGTACTGCTaGTGCAGCATGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAWGSYC*CSMVAT
Trigger: GGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAGGAACAAGCCACAGTaGCACTGCGAAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPRNKPQ*HCEAGS
Trigger: TGAACCAGCTTCGCAGTGGCACTGTGGCTTGTTCCT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGGCTGTTGGCCAGCTaGCACAAAGAAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPWLLAS*HKEEAT
Trigger: AGTGGCTTCTTCTTTGTGGCAGCTGGCCAACAGCCA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGCAGGCCGTGCGGTATaGCAAAGCCCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRAGRAV*QSPGLS
Trigger: GGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCATCTCCTGGGGTGTaGCCTGCACAGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHASPGV*PAQFGA
Trigger: TGCACCAAACTGTGCAGGCCACACCCCAGGAGATGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCAGCAAACTGGGCATaGGATGAGTCAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAANWA*DESEPL
Trigger: CAGTGGTTCTGACTCATCCCATGCCCAGTTTGCTGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAGAGACCCTCGGCTCTaGGGGCAGAGGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKRDPRL*GQRTPF
Trigger: GAATGGGGTCCTCTGCCCCCAGAGCCGAGGGTCTCT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTCAAGAAGGCAGCCTaGTCAACGGGGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALKKAA*STGVSG
Trigger: CCCACTGACCCCCGTTGACCAGGCTGCCTTCTTGAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRERTRT*GCMRQT
Trigger: GGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGTGTTCTGGGCCCCCTaGCCGGGCCATTCGCAATGG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRVFWAP*PGHSQW
Trigger: CCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACAC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTACTCCCAGGAGCCTCTaGCTCAGGGGGCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGTPRSL*LRGQSG
Trigger: CCCAGACTGCCCCCTGAGCCAGAGGCTCCTGGGAGT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAACAGTGACATTCAGTaGTCCAGTCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRNSDIQ*SSPLPQ
Trigger: CTGAGGGAGTGGACTGGACCACTGAATGTCACTGTT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGTGTCTGGCTTGCCCTaGGGCCCAGAAGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGVSGLP*GPEGLV
Trigger: GACCAGCCCTTCTGGGCCCCAGGGCAAGCCAGACAC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGATCCACCTGATGGCTaGCCGAGTACCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQADPPDG*PSTPGS
Trigger: GCTCCCTGGGGTACTCGGCCAGCCATCAGGTGGATC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCATGGACTGGAGACCTaGGGAGACGGACGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAHGLET*GDGRGL
Trigger: CAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGTGACCCAGGTGCCATaGACTGGAGACCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPVTQVP*TGDLGR
Trigger: TCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCAC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGACTGCTGCTGCAGCATaGTGGCCACCTTATCCTCAA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPTAAAA*WPPYPQ
Trigger: TTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCAGACCCAGGTTGCCTaGCTCCGGCTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPQTQVA*LRLRTS
Trigger: ACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTACATGGCCAGGGAGATaGAGGCGGCGGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQATWPGR*RRRNSS
Trigger: GGAGGAGTTCCGCCGCCTCCATCTCCCTGGCCATGT...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCCCATGGGACCCACCTaGCTGTTGGCCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGPMGPT*LLASCH
Trigger: GTGGCAGCTGGCCAACAGCCAGGTGGGTCCCATGGG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCAGGTGCTTGGGGGCTaGCTGTCAGGGTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAQVLGG*LSGSPL
Trigger: AAGGGGAGACCCTGACAGCCAGCCCCCAAGCACCTG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGACTTAATCCCCGGCTaGGCCCAGGCTGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQADLIPG*AQADSL
Trigger: GAGGGAGTCAGCCTGGGCCCAGCCGGGGATTAAGTC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGCCCGCTTTGCTGGGTaGAGTCACAGGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGARFAG*SHRLPR
Trigger: CCTGGGGAGCCTGTGACTCCACCCAGCAAAGCGGGC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGCCCCGAGTGTCTTCTaGCCGATCCAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRAPSVF*PIQDNV
Trigger: GACATTGTCCTGGATCGGCCAGAAGACACTCGGGGC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCTTGCAAGGGTGCTGTaGCAAGAGGAGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHLARVL*QEEAWC
Trigger: ACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGACGCCTGAGGCGCTaGCGCGCGCCGCGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHRRLRR*RAPREK
Trigger: CTTCTCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRCCQEA*NAQALR
Trigger: CCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCTCTTCCCTCAAGCCTaGCACAATCTTGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPLFPQA*HNLVPG
Trigger: GCCCGGCACAAGATTGTGTCAGGCTTGAGGGAAGAG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCCAGGGCAAACTGTTTaGCACAGAAGTAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPPGQTV*HRSNSP
Trigger: AGGGCTGTTACTTCTGTGTCAAACAGTTTGCCCTGG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCAACACCCGCATCACTaGCCCCCAGTACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAQHPHH*PPVLPG
Trigger: TCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTCACTGAAGTGTCTCTaGAAGTGCTGGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSLKCL*KCWDTW
Trigger: CCAGGTATCCCAGCACTTTCAGAGACACTTCAGTGA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTCAGCCCTGTCCTCATaGCTGTGCCAAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSALSS*LCQAQA
Trigger: GGCCTGGGCTTGGCACAGTCATGAGGACAGGGCTGA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCGGCTGGGCCCAGGCTaGCTCCCTCCCTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKARLGPG*LPPCGT
Trigger: CGTGCCACAGGGAGGGAGTCAGCCTGGGCCCAGCCG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACGGCTGGGCCCAGGCTaGCTCCCTCCCTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLERLGPG*LPPCGT
Trigger: CGTGCCACAGGGAGGGAGTCAGCCTGGGCCCAGCCG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTGCCCTGACTGGACATaGGACTTAATCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPCPDWT*DLIPGW
Trigger: CCAGCCGGGGATTAAGTCTCATGTCCAGTCAGGGCA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGCAGTGGTGCCCGCTaGCGGGAGTGGAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGSGAR*REWKGV
Trigger: GACTCCCTTCCACTCCCGTCAGCGGGCACCACTGCC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTGCTGGGCCCCATTTTaGGGCGTGAATGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKACWAPF*GVNGLG
Trigger: TCCGAGTCCATTCACGCCTCAAAATGGGGCCCAGCA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAACTCCATCCAGCGCTaGGCAACACGGGCAAACACA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHNSIQR*ATRANT
Trigger: TGTGTTTGCCCGTGTTGCTCAGCGCTGGATGGAGTT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGACTTGCACTCCGGATaGGGGTCTCCACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKADLHSG*GSPLPW
Trigger: CCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAGACGCTCAGAAGTCTaGGCCCACTGGTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPRRSEV*AHWFIS
Trigger: AGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCAGGCTGGAAGTCGATaGAAGATCCAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRQAGSR*KIQALG
Trigger: TCCGAGTGCCTGGATCTTGCATCGACTTCCAGCCTG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCCCCGGGGTGTGCAAGTaGTTGGGGATTGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAPGVCK*LGIGVS
Trigger: TGACACACCAATCCCCAAGCACTTGCACACCCCGGG...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGAGGACCCCATTCCTTaGTCTGACACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPEDPIP*SDTAVS
Trigger: TGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCTGGGTGCTGCCGACTaGTTGCTCCTTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSLGAAD*LLLRDP
Trigger: GGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCTCCTGTGGCCTGGGTaGTGCCGACTGCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGLLWPG*CRLLAP
Trigger: AGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAAAGTCAGAAACACATaGTGGGGGTTCACAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRKVRNT*WGFTSL
Trigger: AAGGCTTGTGAACCCCCAGCATGTGTTTCTGACTTT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCAGAACTGTGCCATaGCGACACCAGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPARTVP*RHQGIL
Trigger: GAGTATGCCCTGGTGTCGGCATGGCACAGTTCTGGC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCGCACACCACCCACGTaGCTCCAGACAGCGAGTGAC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRRTPPT*LQTASD
Trigger: GTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTGTCCCCAGGGCATGTaGAGGTGGCACAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGCPQGM*RWHRSQ
Trigger: CTGGGACCTGTGCCACCTGCACATGCCCTGGGGACA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTGCCAGGGACACGGGTaGTCTGAAACTCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQACQGHG*SETQAR
Trigger: GCGAGCCTGAGTTTCAGAGCACCCGTGTCCCTGGCA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTACGGAGCACGTGAGGTaGAGGAAGAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGTEHVR*RKSGGR
Trigger: CCTGCCACCGCTCTTCCTGCACCTCACGTGCTCCGT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTGGGCAGCTGCGCGGTaGAGGGCAGGACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEWAAAR*RAGLCG
Trigger: CCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTGTCTGAGCCACTGCTaGCACCATCATAACCTAGGT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPCLSHC*HHHNLG
Trigger: ACCTAGGTTATGATGGTGGCAGCAGTGGCTCAGACA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAGTAGCAAGAGCCTCTaGCGGGGAGCATTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPSSKSL*RGAFRP
Trigger: AGGGCGAAATGCTCCCCGGCAGAGGCTCTTGCTACT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGCTCAGCGGGGGACTTaGACTCCGGATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGAQRGT*TPDEGL
Trigger: GAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGACAAGATCTCCCCTGTaGAATCATCCACAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRTRSPL*NHPQCQ
Trigger: CTGGCATTGTGGATGATTCCACAGGGGAGATCTTGT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCGCATCCCCTTTCCATaGCCGGTCACTGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKARIPFP*PVTAGC
Trigger: ACATCCTGCAGTGACCGGCCATGGAAAGGGGATGCG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGCCTGCCCAACACCATaGACCAGCAGCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRACPTP*TSSWIC
Trigger: ACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGGGCAGTGGACCTGGTaGCTCCAATGTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRGQWTW*LQCQQE
Trigger: TTCTTGCTGACATTGGAGCCACCAGGTCCACTGCCC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGGTCAACGGGGGTCAGTaGGATCTCCCGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GAPEGAACQPFVPSALPVVNGGQ*DLPVTQ
Trigger: CTGAGTGACCGGGAGATCCCACTGACCCCCGTTGAC...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGAGTGGATGTTGGAAGTaGTTCCGGCTGTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRSGCWK*FRLLLS
Trigger: AGATAGCAACAGCCGGAACCACTTCCAACATCCACT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGACAGCCTGCCCCATTaGGATTCGGGAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHDSLPH*DSGTFQ
Trigger: CTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTCAGGGGGCAGTCTaGGTGGCTTCCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEAQGAV*VASGSG
Trigger: GCCGCTTCCGGAAGCCACCCAGACTGCCCCCTGAGC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGGTCGATGTCCCCAATaGATTTGGCATGGACTGCTT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPGRCPQ*IWHGLL
Trigger: AAGCAGTCCATGCCAAATCCATTGGGGACATCGACC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTGGCTACGTTCATACTaGGATAGGCGGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPWLRSY*DRRGHP
Trigger: TGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCCTCGAGGTGAGGCGTaGCCCTGGGGAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEPRGEA*PWGREL
Trigger: GAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCCCTGGCAGGAGCCTaGACCCCACATTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAALAGA*TPHLST
Trigger: TGTGGACAAATGTGGGGTCCAGGCTCCTGCCAGGGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCCTGAGGCATGCAGCTaGGGTTTTGGCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAPEACS*GFGSGE
Trigger: CTCACCTGAGCCAAAACCCCAGCTGCATGCCTCAGG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCCAGGTGCCATGGACTaGAGACCTGGGGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRPGAMD*RPGETD
Trigger: GTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCAGGAGGCGGTGGGTaGACACTGAGATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAAGGGG*TLRCLG
Trigger: TCCCAGACATCTCAGTGTCCACCCACCGCCTCCTGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGACTGGTCTTCTGCCTaGCTCTGGGGATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPDWSSA*LWGSYC
Trigger: GCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGTC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGAGGGTCCGAGGCCGTaGGGAGCTCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLEGPRP*GAPLPG
Trigger: CCCTGGAAGTGGAGCTCCCCACGGCCTCGGACCCTC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGGGCGTGGCCAAATTaGATAGTCCTGGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGAWPN*IVLGAS
Trigger: AGAGGCACCCAGGACTATCCAATTTGGCCACGCCCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGAGAACTATGGATATaGGCAGCTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGELWI*AAARCR
Trigger: CCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCACCAAGGGTGTCATTaGGACCCTCACTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRHQGCH*DPHCLS
Trigger: GCTCAGACAGTGAGGGTCCCAATGACACCCTTGGTG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCACCAAGGGTGTCATTaGGACCCTCACTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHHQGCH*DPHCLS
Trigger: GCTCAGACAGTGAGGGTCCCAATGACACCCTTGGTG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGGCTGTGGAGGTGCTaGCCCAGGTGGAGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGRLWRC*PRWSPQ
Trigger: TTGCGGACTCCACCTGGGCCAGCACCTCCACAGCCT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGACTACTGGTCAATGGTaGGGGCAGAAAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPTTGQW*GQKTDG
Trigger: CCCATCTGTTTTCTGCCCCCACCATTGACCAGTAGT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCCTGGAATGTCTGCTTaGAGCTGGATGTGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPPGMSA*SWMWLR
Trigger: TCTTAGCCACATCCAGCTCCAAGCAGACATTCCAGG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTTGCAAGGGTGCTGTaGCAAGAGGAGGCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALARVL*QEEAWC
Trigger: ACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGCCGTCGAGGTGGCCTaGCCGTACGCGGAGACGCCT +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSAVEVA*PYAETP
Trigger: AGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACACAGTTTGGTGCAGATaGCTGAGGAACCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHTVWCR*LRNQAR
Trigger: CCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAAACTGGGCATGGGATaGGTCAGAACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPKLGMG*VRTTGL
Trigger: CAGCCCAGTGGTTCTGACTCATCCCATGCCCAGTTT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGCTCTTCCCTCAAGCCTaGCACAATCTTGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GAPEGAACQPFVPSALPVLFPQA*HNLVPG
Trigger: GCCCGGCACAAGATTGTGTCAGGCTTGAGGGAAGAG...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCAGGTGTCTCCTCCCTaGTCCAATCCATCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAQVSPP*SNPSET
Trigger: GGTCTCTGATGGATTGGATCAGGGAGGAGACACCTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGACTTGGGGGTGCATaGGGCAAACCCCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGLGGA*GKPQVW
Trigger: CCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGGCTTAGGAGAACTTTaGTCAGGCTCTGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHGLGEL*SGSGTR
Trigger: CCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTCCTCGGGGTTGACCTaGCTCTCTGGAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQASSGLT*LSGVLD
Trigger: ATCCAGGACTCCAGAGAGTCAGGTCAACCCCGAGGA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTGTCCAAGTGGGAAGTaGAGACCCGAAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPCPSGK*RPEGSR
Trigger: CCTTGAGCCTTCGGGTCTTCACTTCCCACTTGGACA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACCAGAGGCTGGCCAGTaGGGGCCCGCACACCACCCA +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEPEAGQ*GPAHHP
Trigger: TGGGTGGTGTGCGGGCCCTCACTGGCCAGCCTCTGG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAATAGCAGTCAAGGCTaGGATGGAGGCCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPNSSQG*DGGRFS
Trigger: AGAAAAACGGCCTCCATCTCAGCCTTGACTGCTATT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGATACCTGGGCATCGTaGCCCAGGTGCCATGGACTG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSDTWAS*PRCHGL
Trigger: CAGTCCATGGCACCTGGGTCACGATGCCCAGGTATC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGGAACTTCTCCTGGATaGCGCTATGAAGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRGTSPG*RYEGHH
Trigger: ATGGTGCCCTTCATAGCGTCATCCAGGAGAAGTTCC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGCCGCACGGAGCACGTaGGGTGCAGGAAGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQAARST*GAGRAV
Trigger: CACCGCTCTTCCTGCACCTCACGTGCTCCGTGCGGC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTGCTGGGCCCCATTTTaGGGCGTGAATGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKCWAPF*GVNGLG
Trigger: TCCGAGTCCATTCACGCCTCAAAATGGGGCCCAGCA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCAACCGGGCAGCGGATaGCCTGGGTCAGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGQPGSG*PGSVAQ
Trigger: TTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCCAGCTCTCCAGCACTaGTGGGCATGGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEPALQH*WAWWLG
Trigger: CCCCAGCCACCATGCCCATCAGTGCTGGAGAGCTGG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGTCCGAGCCGGGGGCTaGGGCCCGTTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAVRAGG*GPFSLQ
Trigger: CTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGAC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCCCGGGGTGTGCAAGTaGTTGGGGATTGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAPGVCK*LGIGVS
Trigger: TGACACACCAATCCCCAAGCACTTGCACACCCCGGG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCTTGTGCCGGGCCGGTaGTGGTGTGCCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGLVPGR*WCANGK
Trigger: TTTCCCATTGGCACACCAGCACCGGCCCGGCACAAG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGGTGCTTCTCTTCAGCTaGAGCCTGCCCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAPEGAACQPFVPSALPVVLLFS*SLPWWF
Trigger: GAACCACCAGGGCAGGCTGCAGCTGAAGAGAAGCAC...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCACTGTGGCCTGGGTGCTaGCGACTGCTTGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPALWPGC*RLLAPS
Trigger: CGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAG...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGACACTCTGTGCTTGCTaGAAGCTGCGGAATAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGTLCAC*KLRNSP
Trigger: TGGGCTATTCCGCAGCTTGCAGCAAGCACAGAGTGT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGAGGTCACACTCTGTaGTTGCTGCAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGGHTL*LLQAAE
Trigger: TTCCGCAGCTTGCAGCAAGCACAGAGTGTGACCTCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCAGCTGAGCCAGCCGTaGTCGTGCCATGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEQLSQP*SCHAHL
Trigger: GAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGTGTCCCGACGGCAGTaGCCTCCAGCCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSVSRRQ*PPASRT
Trigger: GGTGCGGCTGGCTGGAGGGCACTGCCGTCGGGACAC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCCTTGTGGGCTGAGGTaGCGAGGCCTCCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEPCGLR*RGLPLP
Trigger: AGGGAGAGGGAGGCCTCGGCACCTCAGCCCACAAGG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGAGAGGACCTTCCTTTaGCCTCCCACCCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRERTFL*PPTLSI
Trigger: GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCTCATCTTCTCGCCTaGTGGATGGAGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPHLLA*WMEGNR
Trigger: TCTATTGCCCTCCATCCAGCAGGCGAGAAGATGAGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCTCTGGGGATCGTACTaGTGCTGCAGCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRLWGSY*CCSMVA
Trigger: GGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTGGGGACTGGTCTTCTaGCTGGCTCTGGGGATCGTA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAWGLVF*LALGIV
Trigger: TACGATCCCCAGAGCCAGGCAGAAGACCAGTCCCCA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTGCCAGGGACACGGGTaGTCTGAAACTCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGCQGHG*SETQAR
Trigger: GCGAGCCTGAGTTTCAGAGCACCCGTGTCCCTGGCA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGACAGGTACTGAGCTGTaGTGCCCACGTAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRTGTEL*CPRSRT
Trigger: CGTGCGGCTACGTGGGCAGCACAGCTCAGTACCTGT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGATGGATATGGGCAGCTaGGCGGTGCAGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRMDMGS*AVQGRT
Trigger: AGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCAT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGGTGCTAGCTCGGCCTaGAGAGCTCTTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRGASSA*RALSFQ
Trigger: TTGGAAACTAAGAGCTCTGCAGGCCGAGCTAGCACC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGATGAGATGGGCTCGTaGATTCTGCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPDEMGS*ILPLHQ
Trigger: CTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCCACTGGTTTATCTCTaGCTCTGCGGTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAPLVYL*LCGPGP
Trigger: AGGACCAGGACCGCAGAGGCAGAGATAAACCAGTGG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCTTCCTCAGAGTAGATaGGCTCTTGGCTTCGGGACA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHLPQSR*ALGFGT
Trigger: TGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATATGTCTGTCCACTTaGCCCACAGGACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRICLST*PTGRAA
Trigger: TGCTGCTCGTCCTGTGGGCCAAGTGGACAGACATAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGAGGTGGGCAAGCATCTaGTCTGTCTGGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGRWASI*SVWLML
Trigger: GAGCATCAACCAGACAGACCAGATGCTTGCCCACCT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGGCAGTGGACCTGGTaGCTCCAATGTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGQWTW*LQCQQE
Trigger: TTCTTGCTGACATTGGAGCCACCAGGTCCACTGCCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTGGAAAGGGATCTCATaGACGCAGGTGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAWKGIS*TQVSPP
Trigger: GGGAGGAGACACCTGCGTCCATGAGATCCCTTTCCA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGAAGAGGAAGAACATCTaGAGCTGCTGGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGKRKNI*SCWHCG
Trigger: GCCACAGTGCCAGCAGCTCCAGATGTTCTTCCTCTT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCGGAGCCAGCAGGATATaGCAGCAACTTACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAGASRI*QQLTCP
Trigger: TGGGCAGGTAAGTTGCTGCCATATCCTGCTGGCTCC...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGACTTCCAGGGGGCTaGATGAACTCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRLPGG*MNSTSA
Trigger: AGCTGATGTGGAGTTCATCCAGCCCCCTGGAAGTCT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGACTCCCAGGAGCCTCTaGCTCAGGGGGCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPETPRSL*LRGQSG
Trigger: CCCAGACTGCCCCCTGAGCCAGAGGCTCCTGGGAGT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGGCTCTCGCTGTCCTaGGGCTGTACTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGLSLS*GCTGKG
Trigger: GCCCTTCCCAGTACAGCCCCAGGACAGCGAGAGCCC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCTCTGGAGTCCTGGATaGGTCAGTGGCTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQALWSPG*VSGCGC
Trigger: ACACCCACAGCCACTGACCCATCCAGGACTCCAGAG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGCTGTTTTCTCCTTGTaGGCTGAGGTGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKAVFSL*AEVPRP
Trigger: AGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCAGGGCATGTGCAGGTaGCACAGGTCCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLQGMCR*HRSQAE
Trigger: CTCGGCCTGGGACCTGTGCCACCTGCACATGCCCTG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCAGGCTCCAGGGGCCCCTGTACCAGCACCTaGTGGGACTGCAGTCCAATG +
Preference number: 4 (lower is better)
Translates to: PSIVTSTRVTRGPSGSRGPCTST*WDCSPM
Trigger: CATTGGACTGCAGTCCCACCAGGTGCTGGTACAGGG...GCCCCTGGAGCCTGAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCTGCTGCAGCATGGTaGCCACCTTATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHAAAAW*PPYPQR
Trigger: TCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACACTGCTGCTGCAGCATaGTGGCCACCTTATCCTCAA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHTAAAA*WPPYPQ
Trigger: TTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGCTCAGTGGCAGAGTTTaGCGAAGGCAGGTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKLSGRV*RRQVER
Trigger: ACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAG...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGGTGCTGGCCCAGGTaGAGTCCGCAATGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGRCWPR*SPQCEG
Trigger: CCCTTCACATTGCGGACTCCACCTGGGCCAGCACCT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCCCCGAGTGTCTTCTaGCCGATCCAGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAAPSVF*PIQDNV
Trigger: GACATTGTCCTGGATCGGCCAGAAGACACTCGGGGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGCTCGAAGCGCTGCATaGCTTTGGCAGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGARSAA*LWQPAV
Trigger: CACAGCAGGCTGCCAAAGCCATGCAGCGCTTCGAGC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTTGCTGCCCCCAGGTCTaGAGCCCAGTTGTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSCCPQV*SPVVGQ
Trigger: CTGACCTACAACTGGGCTCCAGACCTGGGGGCAGCA...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACCTGACTCAGGGCGATaGCGCCGCTGCCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGPDSGR*RRCPSG
Trigger: CCCTGACGGGCAGCGGCGCCATCGCCCTGAGTCAGG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTATTCCAGGAAGCTGTaGGAGCAGGGTAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHYSRKL*EQGRHL
Trigger: TAGGTGCCTACCCTGCTCCCACAGCTTCCTGGAATA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAGACGCCTGAGGCGCTaGCGCGCGCCGCGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIRRLRR*RAPREK
Trigger: CTTCTCGCGCGGCGCGCGCCAGCGCCTCAGGCGTCT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp TGCTCCTGCAGCAGGGCACAGTGGTTAGCTGCCTCCTaGTACCGGGGTTCCATCCAGGCTGAGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: CSCSRAQWLAAS*YRGSIQAEDGE
Trigger: CTCCCCATCCTCAGCCTGGATGGAACCCCGGTACAAGGAGGCAGCTAACCACTGTGCCCTGCTGCAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGCCAAGCCAGGAAGGTaGCCCGGGTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEAKPGR*PGWKVP
Trigger: TGGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGGGACTGCAGTCCAATaGTGGAGGAGTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGGTAVQ*WRSRPG
Trigger: TCCAGGCCTACTCCTCCATCATTGGACTGCAGTCCC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGACGCAGGGGCCAGTCCTaGCGGGACACTCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGRRGQS*RDTPKP
Trigger: TGGCTTTGGAGTGTCCCGTCAGGACTGGCCCCTGCG...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGCTGGGCAATGGCACTaGGAGGCAGCGCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSAGQWH*EAAQGP
Trigger: TGGCCCCTGCGCTGCCTCTCAGTGCCATTGCCCAGC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCCTGGTGGTTCATTCTaGATTGGAAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHPGGSF*IGSSRT
Trigger: GGTTCTGGAGCTTCCAATTCAGAATGAACCACCAGG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGCAGGTGTCTCCTCCCTaGTCCAATCCATCAGAGACC +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKQVSPP*SNPSET
Trigger: GGTCTCTGATGGATTGGATCAGGGAGGAGACACCTG...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSFGIP*TPSSGP
Trigger: GGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGA...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGATGGAAGTCATAGCTaGACGAGTGCACGTGCATCA +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHDGSHS*TSARAS
Trigger: TGATGCACGTGCACTCGTTCAGCTATGACTTCCATC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGGATGGAAGTCATAGCTaGACGAGTGCACGTGCATCA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRDGSHS*TSARAS
Trigger: TGATGCACGTGCACTCGTTCAGCTATGACTTCCATC...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGCTCTCGCTGGCTGGTaGGCACCACGAAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSALAGW*APRRTV
Trigger: TACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTGTCCAAGTGGGAAGTaGAGACCCGAAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKCPSGK*RPEGSR
Trigger: CCTTGAGCCTTCGGGTCTTCACTTCCCACTTGGACA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCAGCCCCGGAGAGCTaGATTTCCCCTATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAAAPES*ISPICF
Trigger: GAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTCATGGATGGGAACCTaGCAGGAAACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPSWMGT*QETSGS
Trigger: ACTCCCGGATGTTTCCTGTCAGGTTCCCATCCATGA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCTCCTTTGGCCAGTGTaGCCTCTCGGACACTGTAGC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRLLWPV*PLGHCS
Trigger: GCTACAGTGTCCGAGAGGTCACACTGGCCAAAGGAG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGACTGAGTCCGGAAGATaGGGTCTCGGGGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLTESGR*GLGAPE
Trigger: CTCAGGCGCCCCGAGACCTCATCTTCCGGACTCAGT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGTTGACCGGTGGTGCTaGGGGTCCGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITVDRWC*GSEAVG
Trigger: CCCCACGGCCTCGGACCCTCAGCACCACCGGTCAAC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGGCCCCATTCTGAGCTaGAGAACTGTCCACAACAAC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAGPILS*RTVHNN
Trigger: GTTGTTGTGGACAGTTCTTCAGCTCAGAATGGGGCC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGCAGCTGAAGCTCGATaGTGGCATCGGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEAAEAR*WHRPGP
Trigger: AGGCCCTGGCCGATGCCATCATCGAGCTTCAGCTGC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGACACTCTCGGTTTTGTaGCGCCTCCGGCCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLTLSVL*RLRPRV
Trigger: CACTCGGGGCCGGAGGCGTCACAAAACCGAGAGTGT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAGAGCTTCTGGACACTaGGGCACAACCAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRRASGH*GTTNLN
Trigger: GTTCAGATTGGTTGTGCCTCAGTGTCCAGAAGCTCT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACTGGGGCGGGCAGCCGTaGTATCCCTTAGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHWGGQP*YPLGPR
Trigger: ACGAGGCCCTAAGGGATATCACGGCTGCCCGCCCCA...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTGCGCTCTGCCATCTTaGTCTCTAGGAACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRCALPS*SLGTVV
Trigger: GACAACAGTTCCTAGAGATCAAGATGGCAGAGCGCA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCAGGCTCCAGGGGCCTCCAGGGGCCAGGGTaGCATAGCCACATACTCAAT +
Preference number: 4 (lower is better)
Translates to: PSIVTSTRVTRGPSGSRGLQGPG*HSHILN
Trigger: ATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG...GCCCCTGGAGCCTGAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTACTTGGAGGGAGAGCTaGCCCCACCAGCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTTWRES*PHQHPL
Trigger: TAGGGGGTGCTGGTGGGGGCAGCTCTCCCTCCAAGT...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGACTTGGAGGGAGAGCTaGCCCCACCAGCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLTWRES*PHQHPL
Trigger: TAGGGGGTGCTGGTGGGGGCAGCTCTCCCTCCAAGT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTGGACAACACAGGTGTaGTTCTCTTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAWTTQV*FSSAAA
Trigger: GGCTGCAGCTGAAGAGAAGCACACCTGTGTTGTCCA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCGTGGGTGGAGAGCTTaGGGGATCTCAGAATACGTC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQARGWRA*GISEYV
Trigger: GACGTATTCTGAGATCCCGCAAGCTCTCCACCCACG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTCAGCATGGAGCCTATaGAGGCAGCATCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSAWSL*RQHPVG
Trigger: ACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAAGAACATCTGGAGCTaGTGGCACTGTGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHKNIWS*WHCGSN
Trigger: ATTGCTGCCACAGTGCCAGCAGCTCCAGATGTTCTT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCGCTGTGCATGCTCCTaGAGCAGGGCACAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRRCACS*SRAQWL
Trigger: TAACCACTGTGCCCTGCTGCAGGAGCATGCACAGCG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGCCAGAACTGTGCCATaGCGACACCAGGGCATACTC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGARTVP*RHQGIL
Trigger: GAGTATGCCCTGGTGTCGGCATGGCACAGTTCTGGC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCAGCCAGCCGTGCTCGTaGCATGCCCACCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSSQPCS*HAHLCS
Trigger: GCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGGGGAGGGCGGTTCCTaGTGCCAGGCTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGGEGGS*CQAGAA
Trigger: TGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTCCCC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCCATTGAGAAGCCAGTaGCAGGGTTGCTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRPLRSQ*QGCCED
Trigger: ATCTTCACAGCAACCCTGGCACTGGCTTCTCAATGG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAGCACCTGGTGGGACTaGAGTCCAATGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKSTWWD*SPMMEE
Trigger: CTCCTCCATCATTGGACTGCAGTCCCACCAGGTGCT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCAGTCAGACCCAGGTTaGCTGGCTCCGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEQSDPG*LAPAQD
Trigger: GTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCCTGGAGGGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGCAGTCAGACCCAGGTTaGCTGGCTCCGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLEGCRRVALRSWCCQEAQSDPG*LAPAQD
Trigger: GTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTG...CGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCTCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATATTCAGGGTTCAGTaGTTCCCCACTGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRIFRVQ*FPTAQE
Trigger: TTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCTTGCAGAGACCAGGTaGTCATTAAATAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRLAETR*SLNRRC
Trigger: GCACCGCCTATTTAATGAGCACCTGGTCTCTGCAAG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGGCAGGGTTGCTGCTTaGAGAGACCAGGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAGRVAA*RDQVLI
Trigger: AATGAGCACCTGGTCTCTGCAAGCAGCAACCCTGCC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTGGGCAGCTGCGCGGTaGAGGGCAGGACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGWAAAR*RAGLCG
Trigger: CCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGGTCTCCCCTTCGATaGCTTCAGCCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGSPLR*LQPCPH
Trigger: ATGAGGACAGGGCTGAAGGCATCGAAGGGGAGACCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTACTTCCACACGGTCCTaGAGGACCCGGACAATGAGC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSTSTRS*RTRTMS
Trigger: GCTCATTGTCCGGGTCCTGCAGGACCGTGTGGAAGT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGGAAGGGAGTCTCACTaGGCCACAGATCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPGRESH*ATDLLH
Trigger: GTGAAGAAGATCTGTGGCGCAGTGAGACTCCCTTCC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCAGGGCCTGGCGAGCTaGTCCTCGGAGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLQGLAS*SSEFLL
Trigger: GAGGAGAAACTCCGAGGAGCAGCTCGCCAGGCCCTG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGGTGCTAGCTCGGCCTaGAGAGCTCTTAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAGASSA*RALSFQ
Trigger: TTGGAAACTAAGAGCTCTGCAGGCCGAGCTAGCACC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGGAGAGGGGCCCAGTTaGCCAGGGGAACAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGGEGPS*PGEQGP
Trigger: CGGCCCTTGTTCCCCTGGGCAACTGGGCCCCTCTCC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCAGATGCCGCTCAGCTaGAGGGCGGGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITQMPLS*RAGRGA
Trigger: GGCCCCTCTCCCCGCCCTGCAGCTGAGCGGCATCTG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGTAGCAAGAGCCTCTaGCGGGGAGCATTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSSKSL*RGAFRP
Trigger: AGGGCGAAATGCTCCCCGGCAGAGGCTCTTGCTACT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACAGCGCTCGGCCCAATaGTGCCCCCAGGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGQRSAQ*CPQVWS
Trigger: GCTCCAGACCTGGGGGCAGCATTGGGCCGAGCGCTG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCCACTCAGTCGGCCCTaGTCACGGCTCAGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGPLSRP*SRLSGG
Trigger: TCCCCCGCTGAGCCGTGAGCAGGGCCGACTGAGTGG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCAGGCATGGCGCCGCTaGGCTTCTCCGCCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEQAWRR*ASPPIC
Trigger: ACAGATTGGCGGAGAAGCGCAGCGGCGCCATGCCTG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGCATCTCCTGGGGTGTaGCCTGCACAGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRASPGV*PAQFGA
Trigger: TGCACCAAACTGTGCAGGCCACACCCCAGGAGATGC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGGGATGTAGAAGAGTaGCACTCCGCTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKARDVEE*HSALGA
Trigger: AGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCAAGAGCACCGGGGTGGTaGAGCCTGGAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPARAPGW*SLEGCR
Trigger: TCTACATCCCTCCAGGCTCCACCACCCCGGTGCTCT...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTATGAGTCAGAACCACTaGGCTGGAGGGAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSMSQNH*AGGRAP
Trigger: CGGTGCTCTCCCTCCAGCCCAGTGGTTCTGACTCAT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGAGGTCAGGGAGGAGTaGGAGATCCTGCACTGGATA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAEVREE*EILHWI
Trigger: TATCCAGTGCAGGATCTCCCACTCCTCCCTGACCTC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGGAGCAGTTTGTCCAGTaGCTTATGCAGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGEQFVQ*LMQDHK
Trigger: CTTGTGGTCCTGCATAAGCCACTGGACAAACTGCTC...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTGCAGGCAGCATCCCGTaGGTGGAGAGCTTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTAGSIP*VESLRD
Trigger: ATCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGC...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAACATCTGGAGCTGCTaGCACTGTGGCAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKNIWSC*HCGSNP
Trigger: GGGATTGCTGCCACAGTGCCAGCAGCTCCAGATGTT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGATGAACCCCCAGCAGTaGCCCCTCGGCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLMNPQQ*PLGTWN
Trigger: GTTCCAGGTGCCGAGGGGCCACTGCTGGGGGTTCAT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCAGGCAGCCAGACGCTaGACATCTGAGAAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAQAARR*TSEKVA
Trigger: AGCTACCTTCTCAGATGTCCAGCGTCTGGCTGCCTG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTAGATCTTTCAGACTaGGAGCCCCACTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALDLSD*EPHSNP
Trigger: GGGATTGGAGTGGGGCTCCCAGTCTGAAAGATCTAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTCTTGGCTGGGAGCCATaGCCCGGCGAGGACTTAGGT +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTLGWEP*PGEDLG
Trigger: ACCTAAGTCCTCGCCGGGCCATGGCTCCCAGCCAAG...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCAAACAAGGTCTCCCCTaGTTGCTCAGGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAKQGLP*LLRLVL
Trigger: CAAGACCAGCCTGAGCAACCAGGGGAGACCTTGTTT...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGAACTCCACATCAGCTaGTGTCAGCTTGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAELHIS*CQLAVP
Trigger: CGGAACTGCAAGCTGACACCAGCTGATGTGGAGTTC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGACCCTGTGGTGGGAGTaGATGTTGGAAGTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKTLWWE*MLEVVP
Trigger: CGGAACCACTTCCAACATCCACTCCCACCACAGGGT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATGGGGTCCGTCAGGGTaGTGGGCCAGGAAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQWGPSG*WARKCR
Trigger: GCGACACTTCCTGGCCCACCACCCTGACGGACCCCA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCCGGGCCATTCGCAATaGCTTCATGTGGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAPGHSQ*LHVVRA
Trigger: AGCTCTTACCACATGAAGCCATTGCGAATGGCCCGG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGGGGCCCAGAAGGGCTaGTCAGTCCTGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHGAQKG*SVLPLA
Trigger: TGCCAGAGGCAGGACTGACCAGCCCTTCTGGGCCCC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGTGTCTGGCTTGCCCTaGGGCCCAGAAGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSVSGLP*GPEGLV
Trigger: GACCAGCCCTTCTGGGCCCCAGGGCAAGCCAGACAC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGACTCTCTGGAGTCCTaGATGGGTCAGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSDSLES*MGQWLW
Trigger: CCACAGCCACTGACCCATCCAGGACTCCAGAGAGTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACAGGGCATGTGCAGGTaGCACAGGTCCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQQGMCR*HRSQAE
Trigger: CTCGGCCTGGGACCTGTGCCACCTGCACATGCCCTG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCTGTCCTTCAGGCCCTaGCAGGAGCCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLSFRP*QEPGPH
Trigger: GTGGGGTCCAGGCTCCTGCCAGGGCCTGAAGGACAG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGAAGTAGTGGGGATTaGAAGGCACTGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRSSGD*KALCGS
Trigger: ACTTCCGCACAGTGCCTTCCAATCCCCACTACTTCT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCCCTGTACCAGCACCTaGTGGGACTGCAGTCCAATG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGPCTST*WDCSPM
Trigger: CATTGGACTGCAGTCCCACCAGGTGCTGGTACAGGG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTCTTCTGCCTGGCTCTaGGGATCGTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSSAWL*GSYCCC
Trigger: GCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCAGGCTCCAGGGGCGTGCCACTGCGAAGCTaGTTCAGCAGTGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: PSIVTSTRVTRGPSGSRGVPLRS*FSSVSQ
Trigger: CTGTGAGACACTGCTGAACCAGCTTCGCAGTGGCAC...GCCCCTGGAGCCTGAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGGGCGTGGCCAAATTaGATAGTCCTGGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGAWPN*IVLGAS
Trigger: AGAGGCACCCAGGACTATCCAATTTGGCCACGCCCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTCAATAGCCAGTCTGTaGGGCGTGGCCAAATTGGAT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSIASL*GVAKLD
Trigger: ATCCAATTTGGCCACGCCCCACAGACTGGCTATTGA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCGTCCAGGAGAACTATaGATATGGGCAGCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSRPGEL*IWAAAR
Trigger: CCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCTCAGTGGCAGAGTTTaGCGAAGGCAGGTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGLSGRV*RRQVER
Trigger: ACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGACCCACCTGGCTGTTaGCCAGCTGCCACAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGDPPGC*PAATKK
Trigger: CTTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACCCATGGGACCCACCTaGCTGTTGGCCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQPMGPT*LLASCH
Trigger: GTGGCAGCTGGCCAACAGCCAGGTGGGTCCCATGGG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCTGACTCCCTCCCTGTaGCACGCGGGGCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLTPSL*HAGQAD
Trigger: ATCAGCCTGCCCCGCGTGCCACAGGGAGGGAGTCAG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATTCCTCCTCTCGCAGTaGGTCTGGGGGCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQFLLSQ*VWGPRR
Trigger: TCTCCGGGGCCCCCAGACCCACTGCGAGAGGAGGAA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGCCCGCTTTGCTGGGTaGAGTCACAGGCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQARFAG*SHRLPR
Trigger: CCTGGGGAGCCTGTGACTCCACCCAGCAAAGCGGGC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGCCGGCCCGCTTTGCTaGGTGGAGTCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSAGPLC*VESQAP
Trigger: GGGAGCCTGTGACTCCACCCAGCAAAGCGGGCCGGC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCTTGGAGCTGGATGTaGCTAAGATCAGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHAWSWM*LRSGDD
Trigger: ATCATCCCCTGATCTTAGCCACATCCAGCTCCAAGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGTATGCCAAAGCCCTaGGCTGTCCCAGGTACCCCG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGMPKP*AVPGTP
Trigger: CGGGGTACCTGGGACAGCCCAGGGCTTTGGCATACC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACCGGCTCTCAGGCCCTaGAGCTCGGCCTCCCTACCT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEPALRP*SSASLP
Trigger: AGGTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCACCCTCTGGCTCTCTaGCAAGCAAGAGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAHPLAL*QARGRT
Trigger: TGTTCTTCCTCTTGCTTGCCAGAGAGCCAGAGGGTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTCCACAAAGGCTAGAGTaGTGCAGGCAACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGPQRLE*CRQPLC
Trigger: GCAAAGGGGTTGCCTGCATCACTCTAGCCTTTGTGG...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCACCTAGCACGTGCTaGTGCACGAGGCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHAPSTC*CTRRRW
Trigger: CCATCTGCGCCTCGTGCATCAGCACGTGCTAGGTGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCACCTCATTAAAGGATaGGAAACCCAGGGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPHLIKG*ETQGPR
Trigger: TCTCGGACCCTGGGTTTCTCATCCTTTAATGAGGTG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTCAACTGCTGGAAGATaGAGGCTACAAAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: VHTGIGGATQRLASEGPHSTAGR*RLQRLR
Trigger: ACGAAGCCTTTGTAGCCTTCATCTTCCAGCAGTTGA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCTCACTGAAGTGTCTCTaGAAGTGCTGGGATACCTGG +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKASLKCL*KCWDTW
Trigger: CCAGGTATCCCAGCACTTTCAGAGACACTTCAGTGA...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCATGTTGCCATTGCGATaGACTTCATTAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRMLPLR*TSLIPH
Trigger: ATGTGGAATTAATGAAGTTCATCGCAATGGCAACAT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCCTGGAGGGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGGTACGGACACAGTGCTaGCCAAGTCGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLEGCRRVALRSWCCQEAVRTQC*PSRLAP
Trigger: AGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTAC...CGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCAAGCCCAGGCCGCTaGAGAAGGCTCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPSPGR*RRLPMG
Trigger: TCCCATGGGGAGCCTTCTTCAGCGGCCTGGGCTTGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACCAAGCCCAGGCCGCTaGAGAAGGCTCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGPSPGR*RRLPMG
Trigger: TCCCATGGGGAGCCTTCTTCAGCGGCCTGGGCTTGG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGCAGGACCCGGACAATaGGCCAGAAGTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQAGPGQ*ARSQAG
Trigger: GCCTGCCTGACTTCTGGCTCATTGTCCGGGTCCTGC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCAACCGGGCAGCGGATaGCCTGGGTCAGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLQPGSG*PGSVAQ
Trigger: TTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGCAGCTGAAGCTCGATaGTGGCATCGGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSAAEAR*WHRPGP
Trigger: AGGCCCTGGCCGATGCCATCATCGAGCTTCAGCTGC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATCGGCTCCCAGACCCTaGCTCAGGGCGATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGSAPRP*LRAMAP
Trigger: CGGCGCCATCGCCCTGAGTCAGGGTCTGGGAGCCGA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGACGCTCAGAAGTCTaGGCCCACTGGTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKARRSEV*AHWFIS
Trigger: AGAGATAAACCAGTGGGCTCAGACTTCTGAGCGTCT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTTGTAGCGCCCATTGCTaGCCGGGGTGTGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTCSAHC*PGCASA
Trigger: AGCACTTGCACACCCCGGGCAGCAATGGGCGCTACA...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTGTAGCGCCCATTGCTaGCCGGGGTGTGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPECSAHC*PGCASA
Trigger: AGCACTTGCACACCCCGGGCAGCAATGGGCGCTACA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCTGGGTGCTGCCGACTaGTTGCTCCTTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLGAAD*LLLRDP
Trigger: GGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCTGTGGCCTGGGTGCTaGCGACTGCTTGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLWPGC*RLLAPS
Trigger: CGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGTCACACTCTGTGCTTaGTGCAAGCTGCGGAATAGC +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKVTLCA*CKLRNS
Trigger: GCTATTCCGCAGCTTGCAGCAAGCACAGAGTGTGAC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCAATTGGTGAGGAAGGCTaGATGGGAGTCCGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAIGEEG*MGVREP
Trigger: CGGCTCACGGACTCCCATGCAGCCTTCCTCACCAAT...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATGCAGGCAACCCCTTTaGCCCCAGTGCCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQCRQPL*PQCPVH
Trigger: GTGGACAGGGCACTGGGGGCAAAGGGGTTGCCTGCA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGAGGGCGGTTCCTGCTaGCAGGCTGGGGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIEGGSC*QAGAAD
Trigger: GTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAGGCCTCCCTCTCCCTaGAGGAGACACAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERPPSP*RRHSRG
Trigger: CCCTCTACTGTGTCTCCTGCAGGGAGAGGGAGGCCT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGCCTCATCTTCTCGCCTaGTGGATGGAGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKPHLLA*WMEGNR
Trigger: TCTATTGCCCTCCATCCAGCAGGCGAGAAGATGAGG...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGAGCACCTGGTGGGACTaGAGTCCAATGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSTWWD*SPMMEE
Trigger: CTCCTCCATCATTGGACTGCAGTCCCACCAGGTGCT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGGCACATGGCCAAAACTaGAGTCATAAGAGTAAACTC +
Preference number: 4 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPAHGQN*SHKSKL
Trigger: GAGTTTACTCTTATGACTGCAGTTTTGGCCATGTGC...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCAGGCTCCGTGCATGTaGATACACTTCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRQAPCM*IHFHTV
Trigger: GACCGTGTGGAAGTGTATGCACATGCACGGAGCCTG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCCGAATCAGGCTCCGTaGATGTGCATACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAPNQAP*MCIHFH
Trigger: GTGGAAGTGTATGCACATGCACGGAGCCTGATTCGG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGGAGAGGGGCCCAGTTaGCCAGGGGAACAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITGEGPS*PGEQGP
Trigger: CGGCCCTTGTTCCCCTGGGCAACTGGGCCCCTCTCC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCCAGAAGCAGCAGATaGCGCTCAGCTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPRSSR*RSAAGR
Trigger: CCGCCCTGCAGCTGAGCGGCATCTGCTGCTTCTGGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCCTGGCTCGAAGCGCTaGATGGCTTTGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSPGSKR*MALAAC
Trigger: GCAGGCTGCCAAAGCCATGCAGCGCTTCGAGCCAGG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACGCTCGGCCCAATGCTaGCCCCAGGTCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGRSAQC*PQVWSP
Trigger: TGGGCTCCAGACCTGGGGGCAGCATTGGGCCGAGCG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGATGAGATGGGCTCGTaGATTCTGCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRDEMGS*ILPLHQ
Trigger: CTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGAAGAGCATGGCTGTTaGACAGTAATGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKEEHGC*TVMHQA
Trigger: CGCCTGGTGCATTACTGTGCAACAGCCATGCTCTTC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTACTGCACATATTGCTaGAGGAAAGCCAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRYCTYC*RKAKLS
Trigger: GCTGAGCTTGGCTTTCCTGCAGCAATATGTGCAGTA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTCCAGGCGCGGGTCCTaGTCCTTTTCCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISRRGS*SFSGRP
Trigger: AGGGCGGCCGGAAAAGGAGCAGGACCCGCGCCTGGA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCGGGGTGGTGGAGCCTaGAGGGATGTAGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLRGGGA*RDVEEW
Trigger: CCACTCTTCTACATCCCTCCAGGCTCCACCACCCCG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGCAGCAAACTGGGCATaGGATGAGTCAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKAANWA*DESEPL
Trigger: CAGTGGTTCTGACTCATCCCATGCCCAGTTTGCTGC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTTTCACCTTGGGCGTTaGCTCCTTGCTTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKFHLGR*LLALYP
Trigger: CGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTCAACGGGGGTCAGTaGGATCTCCCGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVNGGQ*DLPVTQ
Trigger: CTGAGTGACCGGGAGATCCCACTGACCCCCGTTGAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGAGTTCCCAAGTCTaGGCTTTGGAAATGGCGACA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALSSQV*ALEMAT
Trigger: TGTCGCCATTTCCAAAGCCCAGACTTGGGAACTCAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGCAGTGATGTCCAAGTaGGAAGTGAAGACCCGAAGG +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAAVMSK*EVKTRR
Trigger: CCTTCGGGTCTTCACTTCCCACTTGGACATCACTGC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGGGCCACCCAGAGGCTaGCCAGTGAGGGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGGPPRG*PVRART
Trigger: TGTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCCTCGAGGTGAGGCGTaGCCCTGGGGAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITPRGEA*PWGREL
Trigger: GAGCTCCCTTCCCCAGGGCCACGCCTCACCTCGAGG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCTGGCAGATCATGGATaGGAACCTGACAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRLADHG*EPDRKH
Trigger: ATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTCACGGTCCCCTCCCTaGCTTCTCTTACAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPESRSPP*LLLQRQ
Trigger: CTGCCGCTGTAAGAGAAGCCAGGGAGGGGACCGTGA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCAGTCAAGGCTGAGATaGAGGCCGTTTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAQSRLR*RPFFWR
Trigger: TCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTTCTCGCCTGCTGGATaGAGGGCAATAGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRFSPAG*RAIEEV
Trigger: TACTTCTTCTATTGCCCTCCATCCAGCAGGCGAGAA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCATCTTCTCGCCTGCTaGATGGAGGGCAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPHLLAC*MEGNRR
Trigger: TCTTCTATTGCCCTCCATCCAGCAGGCGAGAAGATG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCAGGAACACCTCCCGCTaGGAAGGGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVVAAFHRHFHPCYSRALRNTSR*EGSKRQ
Trigger: CTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCT...GAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAGCTTTACCTCCAATTaGGACCCTCCTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPSFTSN*DPPLAS
Trigger: ACTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGATGAACCCCCAGCAGTaGCCCCTCGGCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGMNPQQ*PLGTSG
Trigger: GCCAGAGGTGCCGAGGGGCCACTGCTGGGGGTTCAT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562955.2
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTTGTCAGAGAGATCTCTaGCCCAGGGTCTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSCQRDL*PRVWNA
Trigger: GGCATTCCAGACCCTGGGCCAGAGATCTCTCTGACA...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCTCCTCTTCTGGGGGTaGCAGTGGGGGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSLLFWG*QWGPEA
Trigger: GGCCTCGGGCCCCCACTGCCACCCCCAGAAGAGGAG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACAGGGCAGGACTCTGTaGGATGCCCCCTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQQGRTL*DAPSSE
Trigger: CTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGGTGCTGGCCCAGGTaGAGTCCGCAATGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLRCWPR*SPQCEG
Trigger: CCCTTCACATTGCGGACTCCACCTGGGCCAGCACCT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAAGGCTGTGGAGGTGCTaGCCCAGGTGGAGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQRLWRC*PRWSPQ
Trigger: TTGCGGACTCCACCTGGGCCAGCACCTCCACAGCCT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTAGGAGCTGCTGCAGGTaGCGACACTCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSRSCCR*RHSVPG
Trigger: GCCGGGCACTGAGTGTCGCCACCTGCAGCAGCTCCT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTAGCGCAGGGCCTGGATaGCCCGAGAGACCCCCATGC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITSAGPG*PERPPC
Trigger: GCATGGGGGTCTCTCGGGCCATCCAGGCCCTGCGCT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACTCTCGCAGTGGGTCTaGGGGCCCCGGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGLSQWV*GPRRGG
Trigger: CCCTCCTCTCCGGGGCCCCCAGACCCACTGCGAGAG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGGCAGCGGATGACCTaGGTCAGTTGCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGQRMT*VSCSNS
Trigger: GGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTTGTGGGCAGAGCTTCTaGACACTGAGGCACAACCAA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQACGQSF*TLRHNQ
Trigger: TTGGTTGTGCCTCAGTGTCCAGAAGCTCTGCCCACA...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGGCAGCCTGCTGTGTTaGTCTCCTCCACTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRGSLLC*SPPLQE
Trigger: TTCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGATGGGCATGGTGGCTaGGGTAGAACGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEDGHGG*GRTLLP
Trigger: TGGCAGCAGCGTTCTACCCCAGCCACCATGCCCATC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCTTGGAGCTGGATGTaGCTAAGATCAGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPAWSWM*LRSGDD
Trigger: ATCATCCCCTGATCTTAGCCACATCCAGCTCCAAGC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGGTATGCCAAAGCCCTaGGCTGTCCCAGGTACCCCG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSGMPKP*AVPGTP
Trigger: CGGGGTACCTGGGACAGCCCAGGGCTTTGGCATACC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCCGGCTCTCAGGCCCTaGAGCTCGGCCTCCCTACCT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIPALRP*SSASLP
Trigger: AGGTAGGGAGGCCGAGCTCCAGGGCCTGAGAGCCGG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGGGTGTTCCACTCTTaGCCCCTGACCTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLRVFHS*PLTSLP
Trigger: AGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACGCAGGGGCCAGTCCTaGCGGGACACTCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGRRGQS*RDTPKP
Trigger: TGGCTTTGGAGTGTCCCGTCAGGACTGGCCCCTGCG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISFGIP*TPSSGP
Trigger: GGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCAGTCTTACTCTGTTGCTaGGGTAGGAGTGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAVLLCC*GRSAVA
Trigger: CGCCACTGCACTCCTACCTCAGCAACAGAGTAAGAC...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGTCGCAGAAAGGTGGTaGGGTGGTAGCCGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGVAERW*GGSRAA
Trigger: TGCGGCACGGCTACCACCTCACCACCTTTCTGCGAC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGGCTTAGGAGAACTTTaGTCAGGCTCTGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRGLGEL*SGSGTR
Trigger: CCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCAGTCAGTGAACTTCTaGTTCAGCACAACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAQSVNF*FSTTRY
Trigger: GTACCTGGTTGTGCTGAATCAGAAGTTCACTGACTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCTGGGTCACTCTCAGTaGCCACACAGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLGHSQ*PHSRQM
Trigger: CATCTGCCTGCTGTGTGGTCACTGAGAGTGACCCAG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCTCCTTTGGCCAGTGTaGCCTCTCGGACACTGTAGC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLLWPV*PLGHCS
Trigger: GCTACAGTGTCCGAGAGGTCACACTGGCCAAAGGAG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTACTGAGTCCGGAAGATaGGGTCTCGGGGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKATESGR*GLGAPE
Trigger: CTCAGGCGCCCCGAGACCTCATCTTCCGGACTCAGT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTCCTGGATGACGCTATaGAGGGCACCATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSWMTL*RAPWAS
Trigger: AGAGGCCCATGGTGCCCTTCATAGCGTCATCCAGGA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGGGCAAAGTCAGCATaGAGACATCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGAKSA*RHPESH
Trigger: GTGTGACTCTGGATGTCTTCATGCTGACTTTGCCCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTGGGGATCGTGGAAATaGAGCACTGCTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPWGSWK*STAFRC
Trigger: ACATCTGAAAGCAGTGCTTCATTTCCACGATCCCCA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGCACGAGCTCATCCGTaGTCTCAGGACCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEARAHP*SQDLPA
Trigger: GGCAGGCAGGTCCTGAGATCACGGATGAGCTCGTGC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGGCCCCATTCTGAGCTaGAGAACTGTCCACAACAAC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSGPILS*RTVHNN
Trigger: GTTGTTGTGGACAGTTCTTCAGCTCAGAATGGGGCC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGGGAGCATTTCGCCCTaGGCTCCCATCACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEGSISP*APITSW
Trigger: CCAGGAGGTGATGGGAGCTCAGGGCGAAATGCTCCC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCTAAGATCAGGGGATaGTGGGAGGAGGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHAKIRG*WEEVDG
Trigger: GCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTCCATGGCCGGTCACTaGAGGATGTCTCTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSMAGH*RMSLGA
Trigger: GGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTCGCTGCCAGGAATTTaGATCCATGGACAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSLPGI*IHGQHW
Trigger: CCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTACACTCTGTGCTTGCTaGAAGCTGCGGAATAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGTLCAC*KLRNSP
Trigger: TGGGCTATTCCGCAGCTTGCAGCAAGCACAGAGTGT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCCCCTTTGCCCCCAGTaGCCTGTCCACCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSPLCPQ*PVHQAC
Trigger: ACAAGCCTGGTGGACAGGGCACTGGGGGCAAAGGGG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACCCCTTTGCCCCCAGTaGCCTGTCCACCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEPLCPQ*PVHQAC
Trigger: ACAAGCCTGGTGGACAGGGCACTGGGGGCAAAGGGG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCCATGCCCACCTCTaGAGCCAGTGGTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSCHAHL*SQWWEQ
Trigger: CTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGAGGGCGGTTCCTGCTaGCAGGCTGGGGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGEGGSC*QAGAAD
Trigger: GTCTGCTGCCCCAGCCTGGCAGCAGGAACCGCCCTC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGACATCCGGGAGTTCCTaGCCATTGTTGGTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRTSGSS*PLLVRG
Trigger: TCCTCTCACCAACAATGGGCAGGAACTCCCGGATGT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTGGGGATCGTACTGCTaGTGCAGCATGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHWGSYC*CSMVAT
Trigger: GGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCA...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCTTGCAGAGACCAGGTaGTCATTAAATAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQALAETR*SLNRRC
Trigger: GCACCGCCTATTTAATGAGCACCTGGTCTCTGCAAG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGACCTCCTTCTCAGTGTaGTTCTTCCGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPETSFSV*FFRRKA
Trigger: GGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCACAGGTACTGAGCTGTaGTGCCCACGTAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSTGTEL*CPRSRT
Trigger: CGTGCGGCTACGTGGGCAGCACAGCTCAGTACCTGT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGGGTCTCCCCTTCGATaGCTTCAGCCCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEGSPLR*LQPCPH
Trigger: ATGAGGACAGGGCTGAAGGCATCGAAGGGGAGACCC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCGTGATCTCAGGACCTaGCTGCCCAACACCATGGAC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERDLRT*LPNTMD
Trigger: GTCCATGGTGTTGGGCAGGCAGGTCCTGAGATCACG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAGTTTCTCCTCCAGCTaGACAATACTAATGTTCCCC +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSFSSS*TILMFP
Trigger: GGGGAACATTAGTATTGTGCAGCTGGAGGAGAAACT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCAGGGCCTGGCGAGCTaGTCCTCGGAGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAQGLAS*SSEFLL
Trigger: GAGGAGAAACTCCGAGGAGCAGCTCGCCAGGCCCTG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTGTTGGTCTCCTCCACTaGAAGAAGTTCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAVGLLH*KKFLPR
Trigger: TCTGGGAAGGAACTTCTTGCAGTGGAGGAGACCAAC...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACCACTCAGTCGGCCCTaGTCACGGCTCAGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGPLSRP*SRLSGG
Trigger: TCCCCCGCTGAGCCGTGAGCAGGGCCGACTGAGTGG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGAAGAGCATGGCTGTTaGACAGTAATGCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSEEHGC*TVMHQA
Trigger: CGCCTGGTGCATTACTGTGCAACAGCCATGCTCTTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCATGCTGGGATCCCATaGTGGGAGCTCAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEHAGIP*WELSLP
Trigger: AGGCAGACTGAGCTCCCAGCATGGGATCCCAGCATG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGACTGGAGCAGGCCGTaGGGTATGCCAAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEDWSRP*GMPKPW
Trigger: CCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGGCATGGCGCCGCTaGGCTTCTCCGCCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQAWRR*ASPPIC
Trigger: ACAGATTGGCGGAGAAGCGCAGCGGCGCCATGCCTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGAGGTGGGCAAGCATCTaGTCTGTCTGGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRRWASI*SVWLML
Trigger: GAGCATCAACCAGACAGACCAGATGCTTGCCCACCT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAATCAGAACCACTGGGCTaGAGGGAGAGCACCGGGGTG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLESEPLG*RESTGV
Trigger: CACCCCGGTGCTCTCCCTCCAGCCCAGTGGTTCTGA...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGATCAGAACCACTGGGCTaGAGGGAGAGCACCGGGGTG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGSEPLG*RESTGV
Trigger: CACCCCGGTGCTCTCCCTCCAGCCCAGTGGTTCTGA...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGATCCATGGACAGCACTaGCTTCCAGTAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKIHGQH*LPVGSK
Trigger: TTTGCTGCCTACTGGAAGCCAGTGCTGTCCATGGAT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACGTGCCGGGCCGGTGCTaGTGTGCCAATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHVPGRC*CANGKT
Trigger: GGTTTTCCCATTGGCACACCAGCACCGGCCCGGCAC...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGTGCCGGGCCGGTGCTaGTGTGCCAATGGGAAAACC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGVPGRC*CANGKT
Trigger: GGTTTTCCCATTGGCACACCAGCACCGGCCCGGCAC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAGGATGGAGAGGAGCTaGGCAATGGCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERMERS*AMALRG
Trigger: GCCTCTCAGTGCCATTGCCCAGCTCCTCTCCATCCT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCCACTGCAGGCGAAGTaGAATCCTTCAGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSPLQAK*NPSESR
Trigger: CCGACTTTCTGAAGGATTCCACTTCGCCTGCAGTGG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEERTRT*GCMRQT
Trigger: GGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGCTCAGGGGGCAGTCTaGGTGGCTTCCGGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGAQGAV*VASGSG
Trigger: GCCGCTTCCGGAAGCCACCCAGACTGCCCCCTGAGC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACTCTGCAGCCAGTGGTaGGAACAGAGGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGLCSQW*EQRSRS
Trigger: GGACCGGCTCCTCTGTTCCCACCACTGGCTGCAGAG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAATCGATCAGGCCCCGGTaGCTCCAGCAAGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLESIRPR*LQQEEA
Trigger: CGCCTCTTCTTGCTGGAGCCACCGGGGCCTGATCGA...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATTCCTGCTGCCAGGCTaGGGCAGCAGACCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQFLLPG*GSRPSR
Trigger: TCTTGAGGGTCTGCTGCCCCAGCCTGGCAGCAGGAA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGTGGCTGTGGGTGTTTaGGGAGGGCGGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGVAVGV*GGRFLL
Trigger: CAGCAGGAACCGCCCTCCCCAAACACCCACAGCCAC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAATGGGTCAGTGGCTGTaGGTGTTTGGGGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQMGQWL*VFGEGG
Trigger: ACCGCCCTCCCCAAACACCCACAGCCACTGACCCAT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGGGCCACCCAGAGGCTaGCCAGTGAGGGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRGPPRG*PVRART
Trigger: TGTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCTGTCCTTCAGGCCCTaGCAGGAGCCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSILSFRP*QEPGPH
Trigger: GTGGGGTCCAGGCTCCTGCCAGGGCCTGAAGGACAG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATCACGGTCCCCTCCCTaGCTTCTCTTACAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQSRSPP*LLLQRQ
Trigger: CTGCCGCTGTAAGAGAAGCCAGGGAGGGGACCGTGA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCACCCCCAGTACTTCCTaGACACGCCCCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSTPSTS*TRPSRV
Trigger: TACCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAACCCCCAGTACTTCCTaGACACGCCCCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQTPSTS*TRPSRV
Trigger: TACCCTGCTGGGGCGTGTCCAGGAAGTACTGGGGGT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACACCTCGTGGGACTGCTaGAGCCCATCAACACCCGCA +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHTSWDC*SPSTPA
Trigger: TGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCACCTCGTGGGACTGCTaGAGCCCATCAACACCCGCA +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSTSWDC*SPSTPA
Trigger: TGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGAAGGGGGTGCACAGTaGGGACAGCACGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGEGGAQ*GQHVRL
Trigger: CAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGACAGTCAGGGAATCCTaGAAGAGGTGCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRTVRES*KRCRES
Trigger: GCTCTCTCTGCACCTCTTCCAGGATTCCCTGACTGT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACCAGGTGCCATGGACTaGAGACCTGGGGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGPGAMD*RPGETD
Trigger: GTCCGTCTCCCCAGGTCTCCAGTCCATGGCACCTGG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCTCTGGCCCAGGGTCTaGAATGCCAGGGACACGGGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGLWPRV*NARDTG
Trigger: ACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTCCTCTTCTGGGGGTaGCAGTGGGGGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLLFWG*QWGPEA
Trigger: GGCCTCGGGCCCCCACTGCCACCCCCAGAAGAGGAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGAAGAAGGCTCCCCATaGGACCCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSEEGSP*DPPGCW
Trigger: CCAACAGCCAGGTGGGTCCCATGGGGAGCCTTCTTC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGACTTAATCCCCGGCTaGGCCCAGGCTGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKADLIPG*AQADSL
Trigger: GAGGGAGTCAGCCTGGGCCCAGCCGGGGATTAAGTC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAGCGCAGGGCCTGGATaGCCCGAGAGACCCCCATGC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSSAGPG*PERPPC
Trigger: GCATGGGGGTCTCTCGGGCCATCCAGGCCCTGCGCT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGATGCAGCCAGGCAGCTaGGTCGAAGAGCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEMQPGS*VEEHGC
Trigger: ACAGCCATGCTCTTCGACCCAGCTGCCTGGCTGCAT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCCTGACTCAGGGCGATaGCGCCGCTGCCCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAPDSGR*RRCPSG
Trigger: CCCTGACGGGCAGCGGCGCCATCGCCCTGAGTCAGG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCCTTCCGAGAGGGACTaGAGCAGGCCGTGCGGTATG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSPSERD*SRPCGM
Trigger: CATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGCCGTCGAGGTGGCCTaGCCGTACGCGGAGACGCCT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKAVEVA*PYAETP
Trigger: AGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTCCGCCAATCTGTCCTaGCTATTCCCCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPESANLS*LFPELS
Trigger: GGAGAGCTCGGGGAATAGCCAGGACAGATTGGCGGA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGGGACTGCAGTCCAATaGTGGAGGAGTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQGTAVQ*WRSRPG
Trigger: TCCAGGCCTACTCCTCCATCATTGGACTGCAGTCCC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLCCQEA*NAQALR
Trigger: CCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGATGGGGCCTTGGAAATaGTACGGACCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRMGPWK*YGPCRR
Trigger: CCTTCTACATGGTCCGTATCATTTCCAAGGCCCCAT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCTCTTCCCTCAAGCCTaGCACAATCTTGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHLFPQA*HNLVPG
Trigger: GCCCGGCACAAGATTGTGTCAGGCTTGAGGGAAGAG...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGAGGTAGCGGGACAGTaGCGCCAGGCTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITEVAGQ*RQARRG
Trigger: GCCTCTTCTAGCCTGGCGTCACTGTCCCGCTACCTC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGACCAGATTGAGCTCTaGGTCTCCCTCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGDQIEL*VSLQGL
Trigger: GAGGCCCTGGAGGGAGACTCAGAGCTCAATCTGGTC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTGCTGAGCCCCTAAGGTaGGCTGGGGACTTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAAEPLR*AGDLAV
Trigger: CACTGCTAAGTCCCCAGCTCACCTTAGGGGCTCAGC...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTTCAACAGGGACCTGCTaGGCCCCTAAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVASTGTC*APKVSW
Trigger: CCAGCTCACCTTAGGGGCTCAGCAGGTCCCTGTTGA...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACAACACCCGCATCACTaGCCCCCAGTACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQQHPHH*PPVLPG
Trigger: TCCAGGAAGTACTGGGGGTCAGTGATGCGGGTGTTG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCCCACAGGATCCACCTaGTGGCTGGCCGAGTACCCC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSPTGST*WLAEYP
Trigger: GGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGATACCTGGGCATCGTaGCCCAGGTGCCATGGACTG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKADTWAS*PRCHGL
Trigger: CAGTCCATGGCACCTGGGTCACGATGCCCAGGTATC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGCGGTGGGTGGACACTaGGATGTCTGGGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGAVGGH*DVWERA
Trigger: AGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAGCAGGCCCCAGGTCTaGTTCACGGCTCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISRPQV*FTALPV
Trigger: TACCGGGAGAGCCGTGAATCAGACCTGGGGCCTGCT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACATGGGCCTCTCCTCTaGGCTGGCAGACATCTGTCA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQHGPLL*AGRHLS
Trigger: TGACAGATGTCTGCCAGCTCAGAGGAGAGGCCCATG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGAAGCAGTCGCTGGTTaGCCTCCCTGCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGEAVAG*PPCRSP
Trigger: GGGAGATCTGCAGGGAGGTCAACCAGCGACTGCTTC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGGGCCACAACGCCAGTaGCAAGGGGGCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKGPQRQ*QGGPSF
Trigger: GAAGGAGGGGCCCCCTTGTCACTGGCGTTGTGGCCC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTGGGCTCCAGAATCTaGGCCTGGCGCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRALGSRI*AWRPLS
Trigger: GCTGAGCGGGCGCCAGGCTCAGATTCTGGAGCCCAG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCGGGCAAACACAGGATaGAGGGTCCCCACCTCACCC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIRANTG*RVPTSP
Trigger: GGGTGAGGTGGGGACCCTTCATCCTGTGTTTGCCCG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGTTGTCCATGGTAGGTaGCAGGATCAGGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEVVHGR*QDQEVW
Trigger: CCAGACCTCCTGATCCTGTCACCTACCATGGACAAC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGATGCACCAGGCGGGATaGCTGCTTCAGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGMHQAG*LLQGLQ
Trigger: CTGGAGACCCTGAAGCAGTCATCCCGCCTGGTGCAT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGCTAAGATCAGGGGATaGTGGGAGGAGGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAAKIRG*WEEVDG
Trigger: GCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCGAGGACGCCAGATCTaGGACGCTCAGAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSRGRQI*DAQKSE
Trigger: CTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAACTGGTTCATCTGGCTaGCACCCAGGGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLETGSSG*HPGGRT
Trigger: TGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGT...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCCAGGCTGGAAGTCGATaGAAGATCCAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: NVVAAFHRHFHPCYSRALQAGSR*KIQALG
Trigger: TCCGAGTGCCTGGATCTTGCATCGACTTCCAGCCTG...GAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACTCCATGGCCGGTCACTaGAGGATGTCTCTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSMAGH*RMSLGA
Trigger: GGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGA...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTTCAGGAAGCGTGAAATaGTCAGGCACTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSGSVK*SGTEEK
Trigger: CTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGA...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCCTGACACAATCTTGTaGCGGGCCGGTGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGPDTIL*RAGAGV
Trigger: CACACCAGCACCGGCCCGGCACAAGATTGTGTCAGG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTGGGCGTTGGCTCCTTaGTTTGTACCCGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGWALAP*FVPGGG
Trigger: TCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGTCAGGTCCTGGAGGTaGTTCCAGATTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGVRSWR*FQIPGP
Trigger: TGGCCCTGGAATCTGGAAGCACCTCCAGGACCTGAC...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGAGTGGTTCCGGCTGTTaGTATCTGTGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSGSGC*YLCTWE
Trigger: CTCCCAAGTACACAGATAGCAACAGCCGGAACCACT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHDGGHK*FKGRAG
Trigger: CCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGAATCCTGGAAGAGGTaGAGAGAGAGCCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLESWKR*RESQGR
Trigger: CCTCCCTTGGCTCTCTCTGCACCTCTTCCAGGATTC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACAGCAGCTCTGGGGATCGTACTaGTGCTGCAGCATGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPGCHSHILNAHVVFPQQLWGSY*CCSMVA
Trigger: GGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAG...CTGCTGTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGGACTGGTCTTCTaGCTGGCTCTGGGGATCGTA +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSWGLVF*LALGIV
Trigger: TACGATCCCCAGAGCCAGGCAGAAGACCAGTCCCCA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACAGTCAGACCCAGGTTaGCTGGCTCCGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGQSDPG*LAPAQD
Trigger: GTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTGAGACCTCCTTCTCAGTGTaGTTCTTCCGGCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGTPLLVLSGSVKCSGTETSFSV*FFRRKA
Trigger: GGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGT...CTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGCCCCCTCTTCGGAGTaGCCCCACCATCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEAPSSE*PHHLIF
Trigger: GAAGATGAGATGGTGGGGGCACTCCGAAGAGGGGGC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCAGGACTCTGTGGGATaGCCCCTCTTCGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITQDSVG*PLFGVP
Trigger: GGGCACTCCGAAGAGGGGGCATCCCACAGAGTCCTG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAATGGATATGGGCAGCTaGGCGGTGCAGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGMDMGS*AVQGRT
Trigger: AGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCAT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGAAACTGCATTGTGGCTaGCAGGTACCCACGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGKLHCG*QVPTGR
Trigger: GCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACCCAGAAGCAGCAGATaGCGCTCAGCTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGPRSSR*RSAAGR
Trigger: CCGCCCTGCAGCTGAGCGGCATCTGCTGCTTCTGGG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCGTGCATTCTGCCACTaGACCAGGCGAACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSRAFCH*TRRTSA
Trigger: AGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTGGGCTCGTGCATTCTaGCACTGCACCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSWARAF*HCTRRT
Trigger: GGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGATGGGCTCGTGCATTCTaGCACTGCACCAGGCGAACC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGWARAF*HCTRRT
Trigger: GGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCA...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACACCAGGCGGGATGACTaGTTCAGGGTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHTRRDD*FRVSSS
Trigger: AGAGCTGGAGACCCTGAAGCAGTCATCCCGCCTGGT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATGCTCTGCAGATACTaGACATATTGCTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: REGLEQAVRYAKALGCPRMLCRY*TYCCRK
Trigger: TTTCCTGCAGCAATATGTGCAGTATCTGCAGAGCAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCAGGAGGAATGGCCTTaGGACCACTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEQEEWP*DHWFIW
Trigger: CCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCACAATGCCAGTAGATaGGCTAAGGTCCAACTCAAT +
Preference number: 4 (lower is better)
Translates to: NHEQCSFVRRASKESPAPHNASR*AKVQLN
Trigger: ATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCGGGGTGGTGGAGCCTaGAGGGATGTAGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRGGGA*RDVEEW
Trigger: CCACTCTTCTACATCCCTCCAGGCTCCACCACCCCG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGAGAGCACCGGGGTGGTaGAGCCTGGAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRAPGW*SLEGCR
Trigger: TCTACATCCCTCCAGGCTCCACCACCCCGGTGCTCT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGACCATGTAGAAGGAATTaGGGGGCTGGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGPCRRN*GAGLGH
Trigger: GTGCCCCAGACCAGCCCCCCAATTCCTTCTACATGG...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTTGCTTTGTACCCGGTaGGGGAAACGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSLLCTR*GKRSRR
Trigger: CCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGAGCAGTTTGTCCAGTaGCTTATGCAGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLREQFVQ*LMQDHK
Trigger: CTTGTGGTCCTGCATAAGCCACTGGACAAACTGCTC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTCTCAAGAAGGCAGCCTaGTCAACGGGGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVALKKAA*STGVSG
Trigger: CCCACTGACCCCCGTTGACCAGGCTGCCTTCTTGAG...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTTCGGCACCTGGAACGTaGCAGGTCCGCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSSAPGT*QVRRST
Trigger: GGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGGGAAGAGCTCTCGCTaGCTGGTGAGCACCACGAAG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAGKSSR*LVSTTK
Trigger: CTTCGTGGTGCTCACCAGCCAGCGAGAGCTCTTCCC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATCGATCAGGCCCCGGTaGCTCCAGCAAGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGSIRPR*LQQEEA
Trigger: CGCCTCTTCTTGCTGGAGCCACCGGGGCCTGATCGA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCTGAGTTCCCAAGTCTaGGCTTTGGAAATGGCGACA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRLSSQV*ALEMAT
Trigger: TGTCGCCATTTCCAAAGCCCAGACTTGGGAACTCAG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGGGCTCTCGCTGTCCTaGGGCTGTACTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGGLSLS*GCTGKG
Trigger: GCCCTTCCCAGTACAGCCCCAGGACAGCGAGAGCCC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAACAGTGACATTCAGTaGTCCAGTCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSNSDIQ*SSPLPQ
Trigger: CTGAGGGAGTGGACTGGACCACTGAATGTCACTGTT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGTGTCACTCAGTGTCTaGCTTGCCCTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAVSLSV*LALGPR
Trigger: TCTGGGCCCCAGGGCAAGCCAGACACTGAGTGACAC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATCCTGGATGGGTCAGTaGCTGTGGGTGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQSWMGQ*LWVFGE
Trigger: CTCCCCAAACACCCACAGCCACTGACCCATCCAGGA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGCTAGGAGGACCTCGTaGGACTGCTGGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEARRTS*DCWSPS
Trigger: TGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGCTAGGAGGACCTCGTaGGACTGCTGGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSARRTS*DCWSPS
Trigger: TGATGGGCTCCAGCAGTCCCACGAGGTCCTCCTAGC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGATGGGGGACAAACTTaGGAAGGAGCTCTATTCACA +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKDGGQT*EGALFT
Trigger: TGTGAATAGAGCTCCTTCCCAAGTTTGTCCCCCATC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACCTGAGGCATGCAGCTaGGGTTTTGGCTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQPEACS*GFGSGE
Trigger: CTCACCTGAGCCAAAACCCCAGCTGCATGCCTCAGG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGAGACGGACGAGGGCTaGCACAGTCAGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEETDEG*HSQGIL
Trigger: CAGGATTCCCTGACTGTGCCAGCCCTCGTCCGTCTC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACGACTGGTCTTCTGCCTaGCTCTGGGGATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHDWSSA*LWGSYC
Trigger: GCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGTC...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCCGGCTCAGGACAAGTaGACAGGTAGGACCCAAATG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLPAQDK*TGRTQM
Trigger: CATTTGGGTCCTACCTGTCCACTTGTCCTGAGCCGG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCTCTGGCCCAGGGTCTaGAATGCCAGGGACACGGGT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSILWPRV*NARDTG
Trigger: ACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTGTCAGAGAGATCTCTaGCCCAGGGTCTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPECQRDL*PRVWNA
Trigger: GGCATTCCAGACCCTGGGCCAGAGATCTCTCTGACA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAACTCGGCCTCCAACTaGGGGGCCCTCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSINSASN*GALQTG
Trigger: TCCAGTCTGGAGGGCCCCCCAGTTGGAGGCCGAGTT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCCAGTCTGTGGGGCGTaGCCAAATTGGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLPVCGA*PNWIVL
Trigger: CAGGACTATCCAATTTGGCCACGCCCCACAGACTGG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGGACAAACTGCATTGTaGCTGCCAGGTACCCACGGG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSGQTAL*LPGTHG
Trigger: CCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACAGAGCGCAGGGCCTaGATGGCCCGAGAGACCCCC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATERRA*MARETP
Trigger: GGGGGTCTCTCGGGCCATCCAGGCCCTGCGCTCTGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGCCGGCCCGCTTTGCTaGGTGGAGTCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAAGPLC*VESQAP
Trigger: GGGAGCCTGTGACTCCACCCAGCAAAGCGGGCCGGC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGCAGCCTGCTGTGTTaGTCTCCTCCACTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGSLLC*SPPLQE
Trigger: TTCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTGCTGCCCCCAGGTCTaGAGCCCAGTTGTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSCCPQV*SPVVGQ
Trigger: CTGACCTACAACTGGGCTCCAGACCTGGGGGCAGCA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCAGCAGGAATGGGTTTaGCTCCTTTTCATCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSQQEWV*LLFISH
Trigger: GTGCGAGATGAAAAGGAGCCAAACCCATTCCTGCTG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGGGTCTCCACTTCCATaGTCGGCAGCAGGAATGGGT +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSGSPLP*SAAGMG
Trigger: ACCCATTCCTGCTGCCGACCATGGAAGTGGAGACCC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAAGGATTCACAGCTTGTaGGGGCCTCTCGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGRIHSL*GPLGSQ
Trigger: CTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGACTACTGGTCAATGGTaGGGGCAGAAAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRTTGQW*GQKTDG
Trigger: CCCATCTGTTTTCTGCCCCCACCATTGACCAGTAGT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAGGCTCAGAAGGAACTaGCAAGAGGGGATCACTACT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSRLRRN*QEGITT
Trigger: AGTAGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTCGAGGCCGTCGAGGTaGCCTGGCCGTACGCGGAGA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASRPSR*PGRTRR
Trigger: TCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACGGGACTGCAGTCCAATaGTGGAGGAGTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRGQGAIATYSMRMLCFHGTAVQ*WRSRPG
Trigger: TCCAGGCCTACTCCTCCATCATTGGACTGCAGTCCC...GTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHTEEKD*RWASIW
Trigger: CCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGT...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTGAAATGCTCAGGCACTaGGGAGAAGGACTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTEMLRH*GEGLKV
Trigger: CACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTC...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAAAAGTCGGACTTCAGTaGGGATGGAGAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGKVGLQ*GWRGAG
Trigger: CCCAGCTCCTCTCCATCCTCACTGAAGTCCGACTTT...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCACCCCATTCCTTGCTCTaGCACAGCTGTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAPHSLL*HSCIRY
Trigger: ATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGG...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAAGGGTGCAGCACAGTaGCAGACAAGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEKGAAQ*QTSRDT
Trigger: TGTGTCTCTGCTTGTCTGTCACTGTGCTGCACCCTT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCTGCCCATTGTTGGTaGGAGGACCTTCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPAHCW*EDLPLP
Trigger: GGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAATAGCAGTCAAGGCTaGGATGGAGGCCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSNSSQG*DGGRFS
Trigger: AGAAAAACGGCCTCCATCTCAGCCTTGACTGCTATT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCCACAGGATCCACCTaGTGGCTGGCCGAGTACCCC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPTGST*WLAEYP
Trigger: GGGGTACTCGGCCAGCCATCAGGTGGATCCTGTGGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCATAAGCTCAGCCTCTaGAAACTCCAGGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSHKLSL*KLQVTD
Trigger: ATCAGTGACCTGGAGTTTTCAGAGGCTGAGCTTATG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGCATAAGCTCAGCCTCTaGAAACTCCAGGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRHKLSL*KLQVTD
Trigger: ATCAGTGACCTGGAGTTTTCAGAGGCTGAGCTTATG...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCTGGGTCACTCTCAGTaGCCACACAGCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSLGHSQ*PHSRQM
Trigger: CATCTGCCTGCTGTGTGGTCACTGAGAGTGACCCAG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAGCAGGCCCCAGGTCTaGTTCACGGCTCTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGSRPQV*FTALPV
Trigger: TACCGGGAGAGCCGTGAATCAGACCTGGGGCCTGCT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGTACGGACACAGTGCTaGCCAAGTCGGCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITVRTQC*PSRLAP
Trigger: AGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTAC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CTCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACTCCTTTGGCCAGTGTaGCCTCTCGGACACTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQGPGCHSHILNAHVVFPLLWPV*PLGHCS
Trigger: GCTACAGTGTCCGAGAGGTCACACTGGCCAAAGGAG...TGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGGGACACGGGTGCTCTaGAACTCAGGCTCGCTTAGG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIGTRVL*NSGSLR
Trigger: CCTAAGCGAGCCTGAGTTTCAGAGCACCCGTGTCCC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAGCGGTGGCAGGTCATaGAGGAAGCTCTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISGGRS*RKLSGP
Trigger: TGGGCCTGAGAGCTTCCTTCATGACCTGCCACCGCT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGTTGACCGGTGGTGCTaGGGGTCCGAGGCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLVDRWC*GSEAVG
Trigger: CCCCACGGCCTCGGACCCTCAGCACCACCGGTCAAC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTCAGCCCTGTCCTCATaGCTGTGCCAAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSSALSS*LCQAQA
Trigger: GGCCTGGGCTTGGCACAGTCATGAGGACAGGGCTGA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCCACAGAGAAGGCATTaGGCACAGAGCGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIPQRRH*AQSAGP
Trigger: AGGCCCTGCGCTCTGTGCTCAATGCCTTCTCTGTGG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACCACAGAGAAGGCATTaGGCACAGAGCGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGPQRRH*AQSAGP
Trigger: AGGCCCTGCGCTCTGTGCTCAATGCCTTCTCTGTGG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGAGGCACAACCAATCTaGACCATAAACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSEAQPI*TINSIQ
Trigger: CTGGATGGAGTTTATGGTTCAGATTGGTTGTGCCTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGACTGGTTCATCTGGCTaGCACCCAGGGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGTGSSG*HPGGRT
Trigger: TGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGT...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTACTGGTTCATCTGGCTaGCACCCAGGGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITTGSSG*HPGGRT
Trigger: TGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGAATGAACGAATGGGCTaGCTTAGTGCACAGGACACA +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRNERMG*LSAQDT
Trigger: TGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAATTAGCACCAGGCGATaGATGTGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQISTRR*MCSHRC
Trigger: GCAGCGATGGCTGCACATGCATCGCCTGGTGCTAAT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTTGCTGCCCGGGGTGTaGAAGTGCTTGGGGATTGGT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSLLPGV*KCLGIG
Trigger: ACCAATCCCCAAGCACTTGCACACCCCGGGCAGCAA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTTTGCTGCCCGGGGTGTaGAAGTGCTTGGGGATTGGT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKALLPGV*KCLGIG
Trigger: ACCAATCCCCAAGCACTTGCACACCCCGGGCAGCAA...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCGACTAGTACGAAGCTaGTCCAGTCCCGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRLVRS*SSPAAE
Trigger: CTCTGCTGCGGGACTGGAGCAGCTTCGTACTAGTCG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTGGGCGTTGGCTCCTTaGTTTGTACCCGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIWALAP*FVPGGG
Trigger: TCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGTGCTTCTCTTCAGCTaGAGCCTGCCCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEVLLFS*SLPWWF
Trigger: GAACCACCAGGGCAGGCTGCAGCTGAAGAGAAGCAC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACTGTGGCCTGGGTGCTaGCGACTGCTTGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGLWPGC*RLLAPS
Trigger: CGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGGGGTTCACAAGCCTTaGATAGCAGCGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAGVHKP*IAAPLR
Trigger: CCTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGGGGTTCACAAGCCTTaGATAGCAGCGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEGVHKP*IAAPLR
Trigger: CCTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGGGGTTCACAAGCCTTaGATAGCAGCGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGGVHKP*IAAPLR
Trigger: CCTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTTGTAGCCGCAGAACGTaGCGCTCAGCCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITCSRRT*RSASPC
Trigger: GCAAGGAGAGGCTGAGCGGCACGTTCTGCGGCTACA...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATGCCATGCCCACCTCTaGAGCCAGTGGTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGCHAHL*SQWWEQ
Trigger: CTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGCCAGCCGTGCTCGTaGCATGCCCACCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASQPCS*HAHLCS
Trigger: GCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCAGCTGAGCCAGCCGTaGTCGTGCCATGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRQLSQP*SCHAHL
Trigger: GAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGAGAGGACCTTCCTTTaGCCTCCCACCCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLERTFL*PPTLSI
Trigger: GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAGGACCTCGTGGGACTaGTGGAGCCCATCAACACCC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIRTSWD*WSPSTP
Trigger: GGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACTGGGGACTGGTCTTCTaGCTGGCTCTGGGGATCGTA +
Preference number: 4 (lower is better)
Translates to: SRGQGAIATYSMRMLCFHWGLVF*LALGIV
Trigger: TACGATCCCCAGAGCCAGGCAGAAGACCAGTCCCCA...GTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGCCTGGAGGGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGAGGAACAAGCCACAGTaGCACTGCGAAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SLEGCRRVALRSWCCQEARNKPQ*HCEAGS
Trigger: TGAACCAGCTTCGCAGTGGCACTGTGGCTTGTTCCT...CGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSVLPH*AGRNRG
Trigger: TCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGGCAGGGTTGCTGCTTaGAGAGACCAGGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQGRVAA*RDQVLI
Trigger: AATGAGCACCTGGTCTCTGCAAGCAGCAACCCTGCC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTGAGGGCAGGGTTGCTGCTTaGAGAGACCAGGTGCTCATT +
Preference number: 4 (lower is better)
Translates to: SGTPLLVLSGSVKCSGTEGRVAA*RDQVLI
Trigger: AATGAGCACCTGGTCTCTGCAAGCAGCAACCCTGCC...CTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTCTGAACCCAAATGCTaGTCAAAGATGCGGACACTG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSEPKC*SKMRTL
Trigger: CAGTGTCCGCATCTTTGAGCAGCATTTGGGTTCAGA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACGTGCATTCTGCCACTaGACCAGGCGAACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGRAFCH*TRRTSA
Trigger: AGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCCAGCACAAAACCTATaGTCTGCAGATACTGCACAT +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAPAQNL*SADTAH
Trigger: ATGTGCAGTATCTGCAGAGCATAGGTTTTGTGCTGG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAAGTTGAGTGTTCCTTaGAAGGGTGCTGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSKLSVP*KGAVAR
Trigger: TCTTGCCACAGCACCCTTGCAAGGAACACTCAACTT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATTCATGCTCACCCCATaGTGGGATCCCATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQFMLTP*WDPMLG
Trigger: TCCCAGCATGGGATCCCAGCATGGGGTGAGCATGAA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGAGGCCCGTTCTCTCTaGAGGAGACCAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGEARSL*RRPREG
Trigger: CCCTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCAGCCAGCTCTCTCTTaGTTCGCGTCCGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITQPALS*FASGSQ
Trigger: CTGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTACAAGATCTCCCCTGTaGAATCATCCACAATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGTRSPL*NHPQCQ
Trigger: CTGGCATTGTGGATGATTCCACAGGGGAGATCTTGT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCGCATCCCCTTTCCATaGCCGGTCACTGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRIPFP*PVTAGC
Trigger: ACATCCTGCAGTGACCGGCCATGGAAAGGGGATGCG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGATATGTCTGTCCACTTaGCCCACAGGACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEICLST*PTGRAA
Trigger: TGCTGCTCGTCCTGTGGGCCAAGTGGACAGACATAT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCCTGCCCAACACCATaGACCAGCAGCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHACPTP*TSSWIC
Trigger: ACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGCGGGGTGGTGGAGCCTaGAGGGATGTAGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSRGGGA*RDVEEW
Trigger: CCACTCTTCTACATCCCTCCAGGCTCCACCACCCCG...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTATGAGTCAGAACCACTaGGCTGGAGGGAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGMSQNH*AGGRAP
Trigger: CGGTGCTCTCCCTCCAGCCCAGTGGTTCTGACTCAT...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGGGTGTGCAAGTGCTTaGGGATTGGTGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEGCASA*GLVCHA
Trigger: AGCATGACACACCAATCCCCAAGCACTTGCACACCC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTTTCACCTTGGGCGTTaGCTCCTTGCTTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEFHLGR*LLALYP
Trigger: CGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATGGAAAGGGATCTCATaGACGCAGGTGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQWKGIS*TQVSPP
Trigger: GGGAGGAGACACCTGCGTCCATGAGATCCCTTTCCA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGATGGGTCAGTGGCTGTGGGTGTTTGGGGAGGGCGGTTCCTGCTGCCAGGCTCCCATTAGGTCAAAATaGAAAGGGATCTCATGGACG +
Preference number: 4 (lower is better)
Translates to: WMGQWLWVFGEGGSCCQAPIRSK*KGISWT
Trigger: CGTCCATGAGATCCCTTTCCATTTTGACCTAATGGG...AGCCTGGCAGCAGGAACCGCCCTCCCCAAACACCCACAGCCACTGACCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAAGAGGAAGAACATCTaGAGCTGCTGGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLKRKNI*SCWHCG
Trigger: GCCACAGTGCCAGCAGCTCCAGATGTTCTTCCTCTT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTTCTCAGGTGCTTAGATACTACCTTGCACAGTCATTCCCCTGGACTGGAAGGGTGAGGAAGGCTGCATaGGAGTCCGTGAGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: ASQVLRYYLAQSFPWTGRVRKAA*ESVSRR
Trigger: TCGCCGGCTCACGGACTCCCATGCAGCCTTCCTCAC...CCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAGCACCTGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGATTCCTACTATTGTGTaGATGTCCTCAGAACAAGTC +
Preference number: 4 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGIPTIV*MSSEQV
Trigger: GACTTGTTCTGAGGACATCCACACAATAGTAGGAAT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGAACTCCACATCAGCTaGTGTCAGCTTGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLELHIS*CQLAVP
Trigger: CGGAACTGCAAGCTGACACCAGCTGATGTGGAGTTC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGTGGGGTCCGTCAGGGTaGTGGGCCAGGAAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKWGPSG*WARKCR
Trigger: GCGACACTTCCTGGCCCACCACCCTGACGGACCCCA...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGTGTTCTGGGCCCCCTaGCCGGGCCATTCGCAATGG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKVFWAP*PGHSQW
Trigger: CCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACAC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGACATCAAAGTCATCCTaGTGTCGAAGTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRTSKSS*CRSPSE
Trigger: CTCTGAGGGACTTCGACACCAGGATGACTTTGATGT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGGGGGCAGTCTGGGTaGCTTCCGGAAGCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARGQSG*LPEAAH
Trigger: ATGCGCCGCTTCCGGAAGCCACCCAGACTGCCCCCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACTCTGCAGCCAGTGGTaGGAACAGAGGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGLCSQW*EQRSRS
Trigger: GGACCGGCTCCTCTGTTCCCACCACTGGCTGCAGAG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGACGTCTTTCCTAAGTaGGAGTCCAGAAACACTAGC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGDVFPK*ESRNTS
Trigger: GCTAGTGTTTCTGGACTCCCACTTAGGAAAGACGTC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCTCTGGAGTCCTGGATaGGTCAGTGGCTGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKALWSPG*VSGCGC
Trigger: ACACCCACAGCCACTGACCCATCCAGGACTCCAGAG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCTCAAGGGACACAGGTaGCTGACAGTGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHLKGHR*LTVVKG
Trigger: GCCTTTGACCACTGTCAGCCACCTGTGTCCCTTGAG...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGCTGTTTTCTCCTTGTaGGCTGAGGTGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSAVFSL*AEVPRP
Trigger: AGGCCTCGGCACCTCAGCCCACAAGGAGAAAACAGC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGATGGGGGACAAACTTaGGAAGGAGCTCTATTCACA +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSDGGQT*EGALFT
Trigger: TGTGAATAGAGCTCCTTCCCAAGTTTGTCCCCCATC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGAAGGGGGTGCACAGTaGGGACAGCACGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGEGGAQ*GQHVRL
Trigger: CAGCCTCACGTGCTGTCCCCACTGTGCACCCCCTTC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGCAGGAGGCGGTGGGTaGACACTGAGATGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGAGGGG*TLRCLG
Trigger: TCCCAGACATCTCAGTGTCCACCCACCGCCTCCTGC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGGAGGCAGGAGGCGGTaGGTGGACACTGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGGGRRR*VDTEMS
Trigger: AGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTGGGAAGGAAAGGTTTTaGAAAGTACTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGGKERF*KVLEAG
Trigger: TCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCC...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAGGAACACCTCCCGCTaGGAAGGGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGRNTSR*EGSKRQ
Trigger: CTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGACTGGTCTTCTGCCTaGCTCTGGGGATCGTACTGC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGDWSSA*LWGSYC
Trigger: GCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGTC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGCAGACCCAGGTTGCCTaGCTCCGGCTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSQTQVA*LRLRTS
Trigger: ACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTG...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGCCCCTCGGCACCTCTaGCAAGCAAGAGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEAPRHL*QARGRT
Trigger: TGTTCTTCCTCTTGCTTGCCAGAGGTGCCGAGGGGC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562955.2
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGGAGAACTATGGATATaGGCAGCTGCGCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSGELWI*AAARCR
Trigger: CCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAAATACAAAACTCAGTaGCAGAGTTTGGCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAKYKTQ*QSLAKA
Trigger: TGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGACCCACCTGGCTGTTaGCCAGCTGCCACAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGDPPGC*PAATKK
Trigger: CTTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTAGCGCTGCATGGCTTTaGCAGCCTGCTGTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSSAAWL*QPAVLV
Trigger: GACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGCTCGAAGCGCTGCATaGCTTTGGCAGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIARSAA*LWQPAV
Trigger: CACAGCAGGCTGCCAAAGCCATGCAGCGCTTCGAGC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGATGATGGGAGGAGGTaGACGGCTCAAAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGDDGRR*TAQSGA
Trigger: AGCCCCACTTTGAGCCGTCCACCTCCTCCCATCATC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGCTGGGATCCCATGCTaGGAGCTCAGTCTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGAGIPC*ELSLPR
Trigger: CCTAGGCAGACTGAGCTCCCAGCATGGGATCCCAGC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACCTTCCGAGAGGGACTaGAGCAGGCCGTGCGGTATG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGPSERD*SRPCGM
Trigger: CATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp GAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATaGCAACCGGGCCCTCGGGCAGCCAGCTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: EERLSIKVRVPS*QPGPRAASSLL
Trigger: CAAGAGAGAGCTGGCTGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQGAGH*GLPIPV
Trigger: AACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGGGACTGCAGTCCAATaGTGGAGGAGTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGGTAVQ*WRSRPG
Trigger: TCCAGGCCTACTCCTCCATCATTGGACTGCAGTCCC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAGGACGAGCAGCATCTaGACTGCGGCTAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKARTSSI*TAARDH
Trigger: ATGGTCTCTAGCCGCAGTTCAGATGCTGCTCGTCCT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTAGGACGAGCAGCATCTaGACTGCGGCTAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSRTSSI*TAARDH
Trigger: ATGGTCTCTAGCCGCAGTTCAGATGCTGCTCGTCCT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTCTGGTCTGTCTGGTTaGTGCTCTGCAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGSGLSG*CSAACS
Trigger: GGAACACGCTGCAGAGCATCAACCAGACAGACCAGA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACTCTGGTCTGTCTGGTTaGTGCTCTGCAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SRGQGAIATYSMRMLCFHSGLSG*CSAACS
Trigger: GGAACACGCTGCAGAGCATCAACCAGACAGACCAGA...GTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLETEEKD*RWASIW
Trigger: CCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGT...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGAAATGCTCAGGCACTaGGGAGAAGGACTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHEMLRH*GEGLKV
Trigger: CACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHCCQEA*NAQALR
Trigger: CCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCA...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCGAGGTAGCGGGACAGTaGCGCCAGGCTAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFEVAGQ*RQARRG
Trigger: GCCTCTTCTAGCCTGGCGTCACTGTCCCGCTACCTC...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTCCTGGTGGTTCATTCTaGATTGGAAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTPGGSF*IGSSRT
Trigger: GGTTCTGGAGCTTCCAATTCAGAATGAACCACCAGG...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TCATGGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCGGACTTGGGGGTGCATaGGGCAAACCCCAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SWPSKFKGLLREIKQGASGLGGA*GKPQVW
Trigger: CCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCC...GCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACATCACCACTTGCCTTCTaGGTAGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTSPLAF*VAGTTG
Trigger: GCCTGTGGTCCCAGCTACTCAGAAGGCAAGTGGTGA...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGCACCTAGCACGTGCTaGTGCACGAGGCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKAPSTC*CTRRRW
Trigger: CCATCTGCGCCTCGTGCATCAGCACGTGCTAGGTGC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGTTTGCCACCCTGTGTaGACTCCCGAGACTCTACCA +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEVCHPV*TPETLP
Trigger: TGGTAGAGTCTCGGGAGTTCACACAGGGTGGCAAAC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGGGTTTTGGCTCAGGTaGGAAAGGTGGAAACACACA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLGFWLR*ERWKHT
Trigger: TGTGTGTTTCCACCTTTCTCACCTGAGCCAAAACCC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACCCCTCAGCCATCACTaGAGTGTCTCTGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQPLSHH*SVSESA
Trigger: AGCACTTTCAGAGACACTTCAGTGATGGCTGAGGGG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGCGGTGGGTGGACACTaGGATGTCTGGGAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSAVGGH*DVWERA
Trigger: AGCCCTTTCCCAGACATCTCAGTGTCCACCCACCGC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAGCGGTGGCAGGTCATaGAGGAAGCTCTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGSGGRS*RKLSGP
Trigger: TGGGCCTGAGAGCTTCCTTCATGACCTGCCACCGCT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCCCATTTTGAGGCGTaGATGGACTCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHPHFEA*MDSDHS
Trigger: ACTGTGATCCGAGTCCATTCACGCCTCAAAATGGGG...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGCACGAGCTCATCCGTaGTCTCAGGACCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKARAHP*SQDLPA
Trigger: GGCAGGCAGGTCCTGAGATCACGGATGAGCTCGTGC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAAACTCCATCCAGCGCTaGGCAACACGGGCAAACACA +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGNSIQR*ATRANT
Trigger: TGTGTTTGCCCGTGTTGCTCAGCGCTGGATGGAGTT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACCTCCAGGGGCCAGGGTaGCATAGCCACATACTCAAT +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHLQGPG*HSHILN
Trigger: ATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGGGATTGGTGTGTCATaGTCCAGGATTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQGIGVS*SRISTR
Trigger: CCTGGTGCTAATCCTGGAGCATGACACACCAATCCC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGGGCCGGTGCTGGTGTaGCAATGGGAAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKGPVLV*QWENPG
Trigger: GCCTGGGTTTTCCCATTGGCACACCAGCACCGGCCC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATGTCAGCAAGAAGGGTaGCCGGTAGTCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGCQQEG*PVVQGQ
Trigger: CTGCCCTTGGACTACCGGGCACCCTTCTTGCTGACA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGTGCTTGCTGCAAGCTaGGGAATAGCCCACGGACAT +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAVLAAS*GIAHGH
Trigger: ATGTCCGTGGGCTATTCCGCAGCTTGCAGCAAGCAC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGTGCTTGCTGCAAGCTaGGGAATAGCCCACGGACAT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEVLAAS*GIAHGH
Trigger: ATGTCCGTGGGCTATTCCGCAGCTTGCAGCAAGCAC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACGGAGGTCACACTCTGTaGTTGCTGCAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHGGHTL*LLQAAE
Trigger: TTCCGCAGCTTGCAGCAAGCACAGAGTGTGACCTCC...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACACCAGGACTTGGGGGTaGATGAGGCAAACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHTRTWG*MRQTPS
Trigger: ACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGT...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGACCAGGACTTGGGGGTaGATGAGGCAAACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGTRTWG*MRQTPS
Trigger: ACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTGGAGACTGCTGCCTGTaGCAAATTGGTGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAGDCCL*QIGEEG
Trigger: GCCTTCCTCACCAATTTGGCACAGGCAGCAGTCTCC...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTTGGGAGGGAGACTGCTaGCTGTGCCAAATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAWEGDC*LCQIGE
Trigger: CTCACCAATTTGGCACAGGCAGCAGTCTCCCTCCCA...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGTGCAGGCAACCCCTTTaGCCCCAGTGCCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKCRQPL*PQCPVH
Trigger: GTGGACAGGGCACTGGGGGCAAAGGGGTTGCCTGCA...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACTGAACGAGTGCACGTaGATCAGGTCCCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGLNECT*IRSRTL
Trigger: CAAGGTGCGGGACCTGATGCACGTGCACTCGTTCAG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCGCACACCACCCACGTaGCTCCAGACAGCGAGTGAC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARTPPT*LQTASD
Trigger: GTCACTCGCTGTCTGGAGGCACGTGGGTGGTGTGCG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGAATCCTGGAAGAGGTaGAGAGAGAGCCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEESWKR*RESQGR
Trigger: CCTCCCTTGGCTCTCTCTGCACCTCTTCCAGGATTC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGTCTGGGAAAGGGCTTaGCCCTCAGCCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGVWERA*PSAITE
Trigger: TTCAGTGATGGCTGAGGGGCAAGCCCTTTCCCAGAC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGCTGCTCATATATCTaGTGCAGGAACACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSCSYI*CRNTSR
Trigger: GCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTGGGGATCGTACTGCTaGTGCAGCATGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSWGSYC*CSMVAT
Trigger: GGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAAAGCCACAGTGCCACTaGGAAGCTGGTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEKPQCH*EAGSAV
Trigger: CACTGCTGAACCAGCTTCGCAGTGGCACTGTGGCTT...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAAGGAACAAGCCACAGTaGCACTGCGAAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQRNKPQ*HCEAGS
Trigger: TGAACCAGCTTCGCAGTGGCACTGTGGCTTGTTCCT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGA +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHSVLPH*AGRNRG
Trigger: TCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGA...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CTCAGGCTCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGCTTGCAGAGACCAGGTaGTCATTAAATAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LRLQGPGCHSHILNAHVVLAETR*SLNRRC
Trigger: GCACCGCCTATTTAATGAGCACCTGGTCTCTGCAAG...CACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAGGCCAGGGCAGGGTTaGTGCTTGCAGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSRPGQG*CLQRPG
Trigger: ACCTGGTCTCTGCAAGCAGCAACCCTGCCCTGGCCT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCAAGGCCAGGGCAGGGTTaGTGCTTGCAGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: ALVHRTHHAKCRSRLPSSRPGQG*CLQRPG
Trigger: ACCTGGTCTCTGCAAGCAGCAACCCTGCCCTGGCCT...TGACGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTTGGATAGTCCTGGGTaGCTCTCCTCTTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGLDSPG*LSSSGG
Trigger: ACCCCCAGAAGAGGAGAGGCACCCAGGACTATCCAA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGCCCCCTCTTCGGAGTaGCCCCACCATCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGAPSSE*PHHLIF
Trigger: GAAGATGAGATGGTGGGGGCACTCCGAAGAGGGGGC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCAGGACTCTGTGGGATaGCCCCTCTTCGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKQDSVG*PLFGVP
Trigger: GGGCACTCCGAAGAGGGGGCATCCCACAGAGTCCTG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CTCCCCGTGATCCCTCTCTCGCTAACCGTAGGCGCTTTTCGTGAAGGCCCGGGTAGTTTCTCCTCCAGCTaGACAATACTAATGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPVIPLSLTVGAFREGPGSFSSS*TILMFP
Trigger: GGGGAACATTAGTATTGTGCAGCTGGAGGAGAAACT...ACCCGGGCCTTCACGAAAAGCGCCTACGGTTAGCGAGAGAGGGATCACGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTACGCCGGCCCGCTTTaGTGGGTGGAGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAYAGPL*WVESQA
Trigger: AGCCTGTGACTCCACCCAGCAAAGCGGGCCGGCGTA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTTGGTCTCCTCCACTaGAAGAAGTTCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVGLLH*KKFLPR
Trigger: TCTGGGAAGGAACTTCTTGCAGTGGAGGAGACCAAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCTGGCTCGAAGCGCTaGATGGCTTTGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPGSKR*MALAAC
Trigger: GCAGGCTGCCAAAGCCATGCAGCGCTTCGAGCCAGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGATTCATGCTCACCCCATaGTGGGATCCCATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGFMLTP*WDPMLG
Trigger: TCCCAGCATGGGATCCCAGCATGGGGTGAGCATGAA...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTTTGCCACTCTTTCATaGTCACCCCATGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLFATLS*SPHAGI
Trigger: GATCCCAGCATGGGGTGAGCATGAAAGAGTGGCAAA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGAGGCCCGTTCTCTCTaGAGGAGACCAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGEARSL*RRPREG
Trigger: CCCTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTCTAACCACGAACAGTaGTCGTTCGTTCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGSNHEQ*SFVRRA
Trigger: GGCCCTGCGAACGAACGAGCACTGTTCGTGGTTAGA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGATCTAACCACGAACAGTaGTCGTTCGTTCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGSNHEQ*SFVRRA
Trigger: GGCCCTGCGAACGAACGAGCACTGTTCGTGGTTAGA...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGACTCAGTATTAAAGTaGGCGTCCCATCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSDSVLK*ASHHCN
Trigger: GTTGCAATGATGGGACGCGCACTTTAATACTGAGTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGGAGGAATGGCCTTaGGACCACTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQEEWP*DHWFIW
Trigger: CCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGTGTTTGGGGGCTGGGTaGTCGGCCTTACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGCLGAG*SALHRK
Trigger: CTTCCTGTGTAAGGCCGACCACCCAGCCCCCAAACA...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAAACGCCGGATAACATaGGTACGATACAATGAACGA +
Preference number: 4 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKKRRIT*VRYNER
Trigger: TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAATGAGTCAGAACCACTaGGCTGGAGGGAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGMSQNH*AGGRAP
Trigger: CGGTGCTCTCCCTCCAGCCCAGTGGTTCTGACTCAT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGAGGTCAGGGAGGAGTaGGAGATCCTGCACTGGATA +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAEVREE*EILHWI
Trigger: TATCCAGTGCAGGATCTCCCACTCCTCCCTGACCTC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGGGCAGTGGACCTGGTaGCTCCAATGTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAGQWTW*LQCQQE
Trigger: TTCTTGCTGACATTGGAGCCACCAGGTCCACTGCCC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTTCATTCTGAATTaGAAGCTCCAGAACCATGTT +
Preference number: 4 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAWFILN*KLQNHV
Trigger: AACATGGTTCTGGAGCTTCCAATTCAGAATGAACCA...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGCAGGCAGCATCCCGTaGGTGGAGAGCTTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRAGSIP*VESLRD
Trigger: ATCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGAGAGACCCTCGGCTCTaGGGGCAGAGGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQRDPRL*GQRTPF
Trigger: GAATGGGGTCCTCTGCCCCCAGAGCCGAGGGTCTCT...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTCGGCACCTGGAACGTaGCAGGTCCGCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLSAPGT*QVRRST
Trigger: GGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR CCA 90 bp AGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTTGGCCCCTCGGCACCTaGAACGTGGCAGGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RLVGEIPTIVWMSSEQVSWPLGT*NVAGPP
Trigger: CGGCGGACCTGCCACGTTCCAGGTGCCGAGGGGCCA...AGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTCAGGCAGCCAGACGCTaGACATCTGAGAAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAQAARR*TSEKVA
Trigger: AGCTACCTTCTCAGATGTCCAGCGTCTGGCTGCCTG...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGGCAGCCAGACGCTaGACATCTGAGAAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQAARR*TSEKVA
Trigger: AGCTACCTTCTCAGATGTCCAGCGTCTGGCTGCCTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTGCAGCAGGGCACAGTaGTTAGCTGCCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSCSRAQ*LAASLY
Trigger: GTACAAGGAGGCAGCTAACCACTGTGCCCTGCTGCA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTGCAGCAGGGCACAGTaGTTAGCTGCCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGCSRAQ*LAASLY
Trigger: GTACAAGGAGGCAGCTAACCACTGTGCCCTGCTGCA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGGAGATGGGGAGAGCCTaGGAGGGAGACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQEMGRA*EGDCCL
Trigger: CAGGCAGCAGTCTCCCTCCCAGGCTCTCCCCATCTC...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGGTGGGAGTGGATGTTaGAAGTGGTTCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGGGSGC*KWFRLL
Trigger: CAACAGCCGGAACCACTTCCAACATCCACTCCCACC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTACCCTGTGGTGGGAGTaGATGTTGGAAGTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSTLWWE*MLEVVP
Trigger: CGGAACCACTTCCAACATCCACTCCCACCACAGGGT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCGGGCCATTCGCAATaGCTTCATGTGGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHPGHSQ*LHVVRA
Trigger: AGCTCTTACCACATGAAGCCATTGCGAATGGCCCGG...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGGAAGAGCTCTCGCTaGCTGGTGAGCACCACGAAG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGKSSR*LVSTTK
Trigger: CTTCGTGGTGCTCACCAGCCAGCGAGAGCTCTTCCC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGTGTCACTCAGTGTCTaGCTTGCCCTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGVSLSV*LALGPR
Trigger: TCTGGGCCCCAGGGCAAGCCAGACACTGAGTGACAC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGACTCTCTGGAGTCCTaGATGGGTCAGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGDSLES*MGQWLW
Trigger: CCACAGCCACTGACCCATCCAGGACTCCAGAGAGTC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATGGCTACGTTCATACTaGGATAGGCGGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGWLRSY*DRRGHP
Trigger: TGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACACTTACATGTCTCTGTaGGTGTGCGGAGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHTYMSL*VCGEGG
Trigger: ACCCCCTTCTCCGCACACCCACAGAGACATGTAAGT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCATGGACTGGAGACCTaGGGAGACGGACGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAHGLET*GDGRGL
Trigger: CAGCCCTCGTCCGTCTCCCCAGGTCTCCAGTCCATG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGGCACTGTGCGGAAGTaGAGACGACTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGGTVRK*RRLISR
Trigger: CCTAGAGATCAGTCGTCTCCACTTCCGCACAGTGCC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTACCAGCACCTGGTaGGACTGCAGTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSCTSTW*DCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGGTGCTGGTACA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACTGTACCAGCACCTGGTaGGACTGCAGTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHCTSTW*DCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGGTGCTGGTACA...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp CTCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACCGGCTCAGGACAAGTaGACAGGTAGGACCCAAATG +
Preference number: 4 (lower is better)
Translates to: LQGPGCHSHILNAHVVFPPAQDK*TGRTQM
Trigger: CATTTGGGTCCTACCTGTCCACTTGTCCTGAGCCGG...TGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACAGACCCAGGTTGCCTaGCTCCGGCTCAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGQTQVA*LRLRTS
Trigger: ACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAGCTTTACCTCCAATTaGGACCCTCCTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSFTSN*DPPLAS
Trigger: ACTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAACTCGGCCTCCAACTaGGGGGCCCTCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRANSASN*GALQTG
Trigger: TCCAGTCTGGAGGGCCCCCCAGTTGGAGGCCGAGTT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTCAATAGCCAGTCTGTaGGGCGTGGCCAAATTGGAT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLSIASL*GVAKLD
Trigger: ATCCAATTTGGCCACGCCCCACAGACTGGCTATTGA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCAGGGCAGGACTCTGTaGGATGCCCCCTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRQGRTL*DAPSSE
Trigger: CTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACAGCATAATCATCACTaGGCAGTGGTGCCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGQHNHH*AVVPAD
Trigger: GTCAGCGGGCACCACTGCCCAGTGATGATTATGCTG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGGACAAACTGCATTGTaGCTGCCAGGTACCCACGGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGGQTAL*LPGTHG
Trigger: CCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAAACCGGGACACCATGTaGGCAGAGCTTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLENRDTM*AELLDT
Trigger: AGTGTCCAGAAGCTCTGCCCACATGGTGTCCCGGTT...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTAGCGCTGCATGGCTTTaGCAGCCTGCTGTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITSAAWL*QPAVLV
Trigger: GACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCAGGATCAGGAGGTCTaGGCACAGGACCAAGTACGG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIQDQEV*AQDQVR
Trigger: CCGTACTTGGTCCTGTGCCCAGACCTCCTGATCCTG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTATCACTACTGGTCAATaGTGGGGGCAGAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSITTGQ*WGQKTD
Trigger: ATCTGTTTTCTGCCCCCACCATTGACCAGTAGTGAT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGAGGGGATCACTACTaGTCAATGGTGGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHRGDHY*SMVGAE
Trigger: TTCTGCCCCCACCATTGACCAGTAGTGATCCCCTCT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTATTCCAGGAAGCTGTaGGAGCAGGGTAGGCACCTA +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSYSRKL*EQGRHL
Trigger: TAGGTGCCTACCCTGCTCCCACAGCTTCCTGGAATA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp ACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATaGGAACCCAGGTGTCATCTCGATGGGAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVATSASKAELG*EPRCHLDGNVQ
Trigger: CTGGACATTCCCATCGAGATGACACCTGGGTTCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp AAGGATGAGAAACCCAGGGTCCGAGAGCAAAGGGACTaGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KDEKPRVREQRD*TVATSASKAEL
Trigger: CAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGCTCTCGGACCCTGGGTTTCTCATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAACAGTTTGGTGCAGATaGCTGAGGAACCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGTVWCR*LRNQAR
Trigger: CCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIQGAGH*GLPIPV
Trigger: AACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCATGGGGCCTTGGAAATaGTACGGACCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSMGPWK*YGPCRR
Trigger: CCTTCTACATGGTCCGTATCATTTCCAAGGCCCCAT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAAAGTCGGACTTCAGTaGGGATGGAGAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIKVGLQ*GWRGAG
Trigger: CCCAGCTCCTCTCCATCCTCACTGAAGTCCGACTTT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCGACCAGATTGAGCTCTaGGTCTCCCTCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WDFVALIPVPPRSFRLGADQIEL*VSLQGL
Trigger: GAGGCCCTGGAGGGAGACTCAGAGCTCAATCTGGTC...GGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGGACTTAGCTCTCCTTaGTTCTGGGCATTGTCACTA +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEGLSSP*FWALSL
Trigger: TAGTGACAATGCCCAGAATCAAGGAGAGCTAAGTCC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGPQRFQ*TAVDVD
Trigger: GTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEPQRFQ*TAVDVD
Trigger: GTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGAGAGTGCAGGAAGATaGGCAAGTTCTGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGESAGR*ASSAVG
Trigger: ACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGCTCTCGCTGGCTGGTaGGCACCACGAAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSALAGW*APRRTV
Trigger: TACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACTGCTTCCCTCCCATTaGGAAGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGLLPSH*EASARV
Trigger: AACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGCAGCCCCGGAGAGCTaGATTTCCCCTATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIAAPES*ISPICF
Trigger: GAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGAGGGCCTTGACCAGTaGCTGACTGATGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGEGLDQ*LTDGGQ
Trigger: TTGTCCCCCATCAGTCAGTCACTGGTCAAGGCCCTC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAGTACCCCAGGGAGCTaGTCGAATAGCAGTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGSTPGS*SNSSQG
Trigger: GCCTTGACTGCTATTCGATCAGCTCCCTGGGGTACT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGGAAGTGGAGACGACTaGTCTCTAGGAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQGSGDD*SLGTSP
Trigger: AGGAGAAGTTCCTAGAGATCAGTCGTCTCCACTTCC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAGTGCCAAGATGCCCTaGCGAATCATACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKASAKMP*RIILTS
Trigger: GCTGGTCAGTATGATTCGTCAGGGCATCTTGGCACT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACAGCAGAGTGCCAAGATGCCCTaGCGAATCATACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GPGCHSHILNAHVVFPQQSAKMP*RIILTS
Trigger: GCTGGTCAGTATGATTCGTCAGGGCATCTTGGCACT...CTGCTGTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGGAACTTCTCCTGGATaGCGCTATGAAGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEGTSPG*RYEGHH
Trigger: ATGGTGCCCTTCATAGCGTCATCCAGGAGAAGTTCC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCATCCAGAGTCACACTaGGGTCCCTCAAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIHPESH*GPSREL
Trigger: GAGTTCCCTTGAGGGACCTCAGTGTGACTCTGGATG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGGGGCAAAGTCAGCATaGAGACATCCAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGGAKSA*RHPESH
Trigger: GTGTGACTCTGGATGTCTTCATGCTGACTTTGCCCC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATGCCCTGACTGGACATaGGACTTAATCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGCPDWT*DLIPGW
Trigger: CCAGCCGGGGATTAAGTCTCATGTCCAGTCAGGGCA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGGTGTCTCCAGCCATTaGGGTGACCAGTGCGGTGAA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGGVSSH*GDQCGE
Trigger: TTCACCGCACTGGTCACCTCAATGGCTGGAGACACC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGACTTGCACTCCGGATaGGGGTCTCCACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGDLHSG*GSPLPW
Trigger: CCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTGGGGCGGGCAGCCGTaGTATCCCTTAGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLWGGQP*YPLGPR
Trigger: ACGAGGCCCTAAGGGATATCACGGCTGCCCGCCCCA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGTTGTCCATGGTAGGTaGCAGGATCAGGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIVVHGR*QDQEVW
Trigger: CCAGACCTCCTGATCCTGTCACCTACCATGGACAAC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAATGCGCTCTGCCATCTTaGTCTCTAGGAACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQCALPS*SLGTVV
Trigger: GACAACAGTTCCTAGAGATCAAGATGGCAGAGCGCA...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACGAGGACGCCAGATCTaGGACGCTCAGAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGRGRQI*DAQKSE
Trigger: CTCAGACTTCTGAGCGTCTCAGATCTGGCGTCCTCG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCTCCAGGGGCCAGGGTaGCATAGCCACATACTCAAT +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITLQGPG*HSHILN
Trigger: ATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCGTCTGGTTGATGCTCTaGAGCGTGTTCCAGAAACGC +
Preference number: 4 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLVWLML*SVFQKR
Trigger: GCGTTTCTGGAACACGCTGCAGAGCATCAACCAGAC...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCAGGTGCTTAGATACTACCTTTTGCTGCCCGGGGTGTaGAAGTGCTTGGGGATTGGT +
Preference number: 4 (lower is better)
Translates to: SVSRRQSTTASQVLRYYLLLPGV*KCLGIG
Trigger: ACCAATCCCCAAGCACTTGCACACCCCGGGCAGCAA...AAGGTAGTATCTAAGCACCTGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTGTCAGCAAGAAGGGTaGCCGGTAGTCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSCQQEG*PVVQGQ
Trigger: CTGCCCTTGGACTACCGGGCACCCTTCTTGCTGACA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTGGACAACACAGGTGTaGTTCTCTTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHWTTQV*FSSAAA
Trigger: GGCTGCAGCTGAAGAGAAGCACACCTGTGTTGTCCA...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGTCAGGTCCTGGAGGTaGTTCCAGATTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGVRSWR*FQIPGP
Trigger: TGGCCCTGGAATCTGGAAGCACCTCCAGGACCTGAC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGTGCTTGCTGCAAGCTaGGGAATAGCCCACGGACAT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIVLAAS*GIAHGH
Trigger: ATGTCCGTGGGCTATTCCGCAGCTTGCAGCAAGCAC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTACCAGGACTTGGGGGTaGATGAGGCAAACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITTRTWG*MRQTPS
Trigger: ACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTGGT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGTGGTTCCGGCTGTTaGTATCTGTGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSGSGC*YLCTWE
Trigger: CTCCCAAGTACACAGATAGCAACAGCCGGAACCACT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACGCTCAGCCTCTCCTTaGTCCTCAAAGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGRSASP*SSKGAA
Trigger: TGCTGCACCCTTTGAGGAGCAAGGAGAGGCTGAGCG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGGGCTGGTCAGTCCTaGCTCTGGCAGGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARAGQS*LWQAIW
Trigger: CCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCAGGGCTGGTCAGTCCTaGCTCTGGCAGGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRRAGQS*LWQAIW
Trigger: CCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAAGCCACAGTGCCACTaGGAAGCTGGTTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DVEEWHSALGAVRKREMLKPQCH*EAGSAV
Trigger: CACTGCTGAACCAGCTTCGCAGTGGCACTGTGGCTT...GAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKASVLPH*AGRNRG
Trigger: TCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGA...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACCGAATCAGGCTCCGTaGATGTGCATACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGPNQAP*MCIHFH
Trigger: GTGGAAGTGTATGCACATGCACGGAGCCTGATTCGG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGAAACTGCATTGTGGCTaGCAGGTACCCACGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKKLHCG*QVPTGR
Trigger: GCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCGTGATCTCAGGACCTaGCTGCCCAACACCATGGAC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSRDLRT*LPNTMD
Trigger: GTCCATGGTGTTGGGCAGGCAGGTCCTGAGATCACG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGGGGTAGAACGCTGCTaGCAGGTTACAAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHGVERC*QVTNRF
Trigger: AAACCTGTTTGTAACCTGGCAGCAGCGTTCTACCCC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGCTGGGGTAGAACGCTaGTGCCAGGTTACAAACAGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGAGVER*CQVTNR
Trigger: CCTGTTTGTAACCTGGCAGCAGCGTTCTACCCCAGC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTATGCTCTGCAGATACTaGACATATTGCTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSMLCRY*TYCCRK
Trigger: TTTCCTGCAGCAATATGTGCAGTATCTGCAGAGCAT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACCACTGGTTTATCTCTaGCTCTGCGGTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGPLVYL*LCGPGP
Trigger: AGGACCAGGACCGCAGAGGCAGAGATAAACCAGTGG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCCATGGACCAGCAGCTaGATATGTCTGTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGPWTSS*ICLSTW
Trigger: CCAAGTGGACAGACATATCCAGCTGCTGGTCCATGG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACAGGTGGGCAAGCATCTaGTCTGTCTGGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: SRGQGAIATYSMRMLCFHRWASI*SVWLML
Trigger: GAGCATCAACCAGACAGACCAGATGCTTGCCCACCT...GTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCAGGGATGTAGAAGAGTaGCACTCCGCTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLRDVEE*HSALGA
Trigger: AGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCT...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGAGGGATGTAGAAGAGTaGCACTCCGCTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRDVEE*HSALGA
Trigger: AGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCCGGGGTGGTGGAGCCTaGAGGGATGTAGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFRGGGA*RDVEEW
Trigger: CCACTCTTCTACATCCCTCCAGGCTCCACCACCCCG...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACGGGTGTGCAAGTGCTTaGGGATTGGTGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHGCASA*GLVCHA
Trigger: AGCATGACACACCAATCCCCAAGCACTTGCACACCC...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGGGTGTGCAAGTGCTTaGGGATTGGTGTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGGCASA*GLVCHA
Trigger: AGCATGACACACCAATCCCCAAGCACTTGCACACCC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGACCATGTAGAAGGAATTaGGGGGCTGGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGPCRRN*GAGLGH
Trigger: GTGCCCCAGACCAGCCCCCCAATTCCTTCTACATGG...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGCGAAGAACCATGCATaGGGCCTTGGAAATGATACG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSAKNHA*GLGNDT
Trigger: CGTATCATTTCCAAGGCCCCATGCATGGTTCTTCGC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGCGAAGAACCATGCATaGGGCCTTGGAAATGATACG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHAKNHA*GLGNDT
Trigger: CGTATCATTTCCAAGGCCCCATGCATGGTTCTTCGC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTTTTCACCTTGGGCGTTaGCTCCTTGCTTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAFHLGR*LLALYP
Trigger: CGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAA...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTCTTTTCGTTTCACCTTaGGCGTTGGCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTLFVSP*ALAPCF
Trigger: AAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAG...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGAGCAGTTTGTCCAGTaGCTTATGCAGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHEQFVQ*LMQDHK
Trigger: CTTGTGGTCCTGCATAAGCCACTGGACAAACTGCTC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCAAGGGCAGTGGACCTaGTGGCTCCAATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITQGQWT*WLQCQQ
Trigger: TTGCTGACATTGGAGCCACCAGGTCCACTGCCCTTG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGTCAGAAACACATGCTaGGGGTTCACAAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSVRNTC*GFTSLA
Trigger: TGCAAGGCTTGTGAACCCCCAGCATGTGTTTCTGAC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGCCATCCACACTCCAATaGATCATCTATAGACACATA +
Preference number: 4 (lower is better)
Translates to: GAPEGAACQPFVPSALPVPSTLQ*IIYRHI
Trigger: TATGTGTCTATAGATGATCCATTGGAGTGTGGATGG...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCACCCAGTTTTCTGACTTaGATCACTAGATTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAPSFLT*ITRLRV
Trigger: CACCCTCAATCTAGTGATCCAAGTCAGAAAACTGGG...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGGTGGGAGTGGATGTTaGAAGTGGTTCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIGGSGC*KWFRLL
Trigger: CAACAGCCGGAACCACTTCCAACATCCACTCCCACC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTACCAGGAGACCGTCATaGATAGGAAGCAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSTRRPS*IGSSPA
Trigger: AGCTGGACTGCTTCCTATCCATGACGGTCTCCTGGT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTAAATGGCGACAGCTCTaGGGGAAGCGGCTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITKWRQL*GKRLRR
Trigger: TCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCCATTT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTCCTGGATGGGTCAGTaGCTGTGGGTGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSSWMGQ*LWVFGE
Trigger: CTCCCCAAACACCCACAGCCACTGACCCATCCAGGA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGTTGACCTGACTCTCTaGAGTCCTGGATGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAVDLTL*SPGWVS
Trigger: ACTGACCCATCCAGGACTCCAGAGAGTCAGGTCAAC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACAGGTGTCATCTCGATaGGAATGTCCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQQVSSR*ECPAVM
Trigger: CATCACTGCTGGACATTCCCATCGAGATGACACCTG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTAGAGGGCTTGAGTTaGCTACGTTCATACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVEGLS*LRSYWD
Trigger: ATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGCCCTGGCAGGAGCCTaGACCCCACATTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKALAGA*TPHLST
Trigger: TGTGGACAAATGTGGGGTCCAGGCTCCTGCCAGGGC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGCTGGCAGATCATGGATaGGAACCTGACAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLADHG*EPDRKH
Trigger: ATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAG...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGTGACCCAGGTGCCATaGACTGGAGACCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRVTQVP*TGDLGR
Trigger: TCTCCCCAGGTCTCCAGTCCATGGCACCTGGGTCAC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGGAGGCAGGAGGCGGTaGGTGGACACTGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKGGRRR*VDTEMS
Trigger: AGACATCTCAGTGTCCACCCACCGCCTCCTGCCTCC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGAGGAACACCTCCCGCTaGGAAGGGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKRNTSR*EGSKRQ
Trigger: CTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTTCCACAGCAGGCTGCTGCAGCATGGTaGCCACCTTATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPGCHSHILNAHVVFPQQAAAAW*PPYPQR
Trigger: TCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGC...CTGCTGTGGAAACACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTCTTCTGCCTGGCTCTaGGGATCGTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSSSAWL*GSYCCC
Trigger: GCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp ATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGTCTTCTGCCTGGCTCTaGGGATCGTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IMQNVVAAFHRHFHPCYSSSAWL*GSYCCC
Trigger: GCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGA...CGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCCGGCTCAGGACAAGTaGACAGGTAGGACCCAAATG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIPAQDK*TGRTQM
Trigger: CATTTGGGTCCTACCTGTCCACTTGTCCTGAGCCGG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCAGCTGACCAAGTCGGCTaGCACCTCCTTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ALVHRTHHAKCRSRLPSSADQVG*HLLLSV
Trigger: CACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGC...TGACGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGTGCAGGAAGAGCGGTaGCAGGTCATGAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIVQEER*QVMKEA
Trigger: AGCTTCCTTCATGACCTGCCACCGCTCTTCCTGCAC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCAGACTGGAAAGCACCTaGCCCAGGCAGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRRLEST*PRQVGR
Trigger: CCTGCCTACCTGCCTGGGCCAGGTGCTTTCCAGTCT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGAAGAAGGCTCCCCATaGGACCCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLREEGSP*DPPGCW
Trigger: CCAACAGCCAGGTGGGTCCCATGGGGAGCCTTCTTC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAAAGATGCGGACACTaGTGTCTCCAGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQRCGH*CLQPLR
Trigger: CCTCAATGGCTGGAGACACCAGTGTCCGCATCTTTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAGGCAGAAGATGAGATaGGCTCGTGCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKARQKMR*ARAFCH
Trigger: GTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGAGGCAGAAGATGAGATaGGCTCGTGCATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRQKMR*ARAFCH
Trigger: GTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGGTCGGCAGCAGGAATaGGTTTGGCTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEGRQQE*VWLLFI
Trigger: GATGAAAAGGAGCCAAACCCATTCCTGCTGCCGACC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGATGGGCATGGTGGCTaGGGTAGAACGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKDGHGG*GRTLLP
Trigger: TGGCAGCAGCGTTCTACCCCAGCCACCATGCCCATC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATGGGATGGGGAGGCCTaGAATGTCTGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGWDGEA*NVCLEL
Trigger: CAGCTCCAAGCAGACATTCCAGGCCTCCCCATCCCA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACAGCACCATGTCGTTaGCAGGACAGGACCCCTCGG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATAPCR*QDRTPR
Trigger: CCGAGGGGTCCTGTCCTGCCAACGACATGGTGCTGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS-3UTR TCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGGGTGTTCCACTCTTaGCCCCTGACCTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARVFHS*PLTSLP
Trigger: AGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAGCCGGCCCGGGCCAGTaGGGGTGTTCCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPAGPGQ*GCSTLD
Trigger: GTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGC...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSTEEKD*RWASIW
Trigger: CCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAAACTGGGCATGGGATaGGTCAGAACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSKLGMG*VRTTGL
Trigger: CAGCCCAGTGGTTCTGACTCATCCCATGCCCAGTTT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAAAGTCGGACTTCAGTaGGGATGGAGAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGKVGLQ*GWRGAG
Trigger: CCCAGCTCCTCTCCATCCTCACTGAAGTCCGACTTT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCCTGGTGGTTCATTCTaGATTGGAAGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSPGGSF*IGSSRT
Trigger: GGTTCTGGAGCTTCCAATTCAGAATGAACCACCAGG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTGCACTCACCGGAAGATaGGGTCTCGGGGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RLVGEIPTIVWMSSEQVSALTGR*GLGAPE
Trigger: CTCAGGCGCCCCGAGACCTCATCTTCCGGTGAGTGC...AGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAACCAGGGCAAACTGTTTaGCACAGAAGTAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEPGQTV*HRSNSP
Trigger: AGGGCTGTTACTTCTGTGTCAAACAGTTTGCCCTGG...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTGCTTCCCTCCCATTaGGAAGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLLPSH*EASARV
Trigger: AACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCATGGGCCTCTCCTCTaGGCTGGCAGACATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKHGPLL*AGRHLS
Trigger: TGACAGATGTCTGCCAGCTCAGAGGAGAGGCCCATG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGTGGAGTCCGCAATGTaGAGGGGGCCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAVESAM*RGPSHQ
Trigger: TTGGTGAGAAGGCCCCCTTCACATTGCGGACTCCAC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACCCCATTTTGAGGCGTaGATGGACTCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGPHFEA*MDSDHS
Trigger: ACTGTGATCCGAGTCCATTCACGCCTCAAAATGGGG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGGGCAAACACAGGATaGAGGGTCCCCACCTCACCC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLRANTG*RVPTSP
Trigger: GGGTGAGGTGGGGACCCTTCATCCTGTGTTTGCCCG...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TGGGCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATTAAATAGGCGGTGCTaGGAGCCTCAGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: WAALVHRTHHAKCRSRLPLNRRC*EPQCAS
Trigger: AGAGGCACACTGAGGCTCTCAGCACCGCCTATTTAA...TGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCAGGCTGGAAGTCGATaGAAGATCCAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSQAGSR*KIQALG
Trigger: TCCGAGTGCCTGGATCTTGCATCGACTTCCAGCCTG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAAATGAACGAATGGGCTaGCTTAGTGCACAGGACACA +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQNERMG*LSAQDT
Trigger: TGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGTCTGGTTGATGCTCTaGAGCGTGTTCCAGAAACGC +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGVWLML*SVFQKR
Trigger: GCGTTTCTGGAACACGCTGCAGAGCATCAACCAGAC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGGTCTGGTTGATGCTCTaGAGCGTGTTCCAGAAACGC +
Preference number: 4 (lower is better)
Translates to: RTHHAKCRSRLPSSLPPVVWLML*SVFQKR
Trigger: GCGTTTCTGGAACACGCTGCAGAGCATCAACCAGAC...CACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAATGTGCAGCCATCGCTaGCAGGAATTTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEMCSHR*QEFASM
Trigger: CATGGATGCAAATTCCTGGCAGCGATGGCTGCACAT...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCTCAGCATGGAGCCTATaGAGGCAGCATCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFSAWSL*RQHPVG
Trigger: ACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGA...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTCAGCATGGAGCCTATaGAGGCAGCATCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRSAWSL*RQHPVG
Trigger: ACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCGAGGACCCCATTCCTTaGTCTGACACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLEDPIP*SDTAVS
Trigger: TGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTC...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTGAGGACCCCATTCCTTaGTCTGACACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAEDPIP*SDTAVS
Trigger: TGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTC...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGGACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGCTCCTGTGGCCTGGGTaGTGCCGACTGCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTWSVYPLIHHSSIILTWLLWPG*CRLLAP
Trigger: AGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGGAG...CCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTAAAGTCAGAAACACATaGTGGGGGTTCACAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTKVRNT*WGFTSL
Trigger: AAGGCTTGTGAACCCCCAGCATGTGTTTCTGACTTT...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGTCACACTCTGTGCTTaGTGCAAGCTGCGGAATAGC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITVTLCA*CKLRNS
Trigger: GCTATTCCGCAGCTTGCAGCAAGCACAGAGTGTGAC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTCTACTGCTTCTCAGGTaGTTAGATACTACCTTGCAC +
Preference number: 4 (lower is better)
Translates to: PTLREVKAESPVAWVLPTLLLLR*LDTTLH
Trigger: GTGCAAGGTAGTATCTAAGCACCTGAGAAGCAGTAG...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTGAACGAGTGCACGTaGATCAGGTCCCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLNECT*IRSRTL
Trigger: CAAGGTGCGGGACCTGATGCACGTGCACTCGTTCAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACTCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSHLLL*IKDDLL
Trigger: CAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGA...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp ATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGAGCACCTGGTGGGACTaGAGTCCAATGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IMQNVVAAFHRHFHPCYSSTWWD*SPMMEE
Trigger: CTCCTCCATCATTGGACTGCAGTCCCACCAGGTGCT...CGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATGGCTGTTGGCCAGCTaGCACAAAGAAGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGWLLAS*HKEEAT
Trigger: AGTGGCTTCTTCTTTGTGGCAGCTGGCCAACAGCCA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAATGCTGCTCAAAGATaGGGACACTGGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKANAAQR*GHWCLQ
Trigger: CTGGAGACACCAGTGTCCGCATCTTTGAGCAGCATT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTCTGAACCCAAATGCTaGTCAAAGATGCGGACACTG +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSSEPKC*SKMRTL
Trigger: CAGTGTCCGCATCTTTGAGCAGCATTTGGGTTCAGA...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGGCTCTGAACCCAAATaGTGCTCAAAGATGCGGACA +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSGSEPK*CSKMRT
Trigger: TGTCCGCATCTTTGAGCAGCATTTGGGTTCAGAGCC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGCTCAGCGGGGGACTTaGACTCCGGATGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLAQRGT*TPDEGL
Trigger: GAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAAGGGGTAGAACGCTGCTaGCAGGTTACAAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEGVERC*QVTNRF
Trigger: AAACCTGTTTGTAACCTGGCAGCAGCGTTCTACCCC...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAGATACTGCACATATTaGTGCAGGAAAGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERYCTY*CRKAKL
Trigger: GAGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAAGTTGAGTGTTCCTTaGAAGGGTGCTGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHKLSVP*KGAVAR
Trigger: TCTTGCCACAGCACCCTTGCAAGGAACACTCAACTT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCATGCTGGGATCCCATaGTGGGAGCTCAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKHAGIP*WELSLP
Trigger: AGGCAGACTGAGCTCCCAGCATGGGATCCCAGCATG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp ACAACCAGTAAGTGGTACTGCCAGGAAGCAAACACAGGCAATGTGATTCCAGATGACCACTGGTTCATCTaGCTGCCACCCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TTSKWYCQEANTGNVIPDDHWFI*LPPRGQ
Trigger: CTGCCCCCTGGGTGGCAGCCAGATGAACCAGTGGTC...ATCTGGAATCACATTGCCTGTGTTTGCTTCCTGGCAGTACCACTTACTGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAGGTACCAGGAGGAATaGCCTTGGGACCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGRYQEE*PWDHWF
Trigger: GAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAGGTGGGCAAGCATCTaGTCTGTCTGGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGRWASI*SVWLML
Trigger: GAGCATCAACCAGACAGACCAGATGCTTGCCCACCT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGAGGGATGTAGAAGAGTaGCACTCCGCTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSRDVEE*HSALGA
Trigger: AGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCT...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp TTGATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATAGAGCACCGGGGTGGTaGAGCCTGGAGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LMLCSVFQKRRITWVRYNRAPGW*SLEGCR
Trigger: TCTACATCCCTCCAGGCTCCACCACCCCGGTGCTCT...ATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTATCCATGGACAGCACTaGCTTCCAGTAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGIHGQH*LPVGSK
Trigger: TTTGCTGCCTACTGGAAGCCAGTGCTGTCCATGGAT...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCATGTAGAAGGAATTaGGGGGCTGGTCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPCRRN*GAGLGH
Trigger: GTGCCCCAGACCAGCCCCCCAATTCCTTCTACATGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCTTTTCGTTTCACCTTaGGCGTTGGCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSLFVSP*ALAPCF
Trigger: AAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGAGGATGGAGAGGAGCTaGGCAATGGCACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQRMERS*AMALRG
Trigger: GCCTCTCAGTGCCATTGCCCAGCTCCTCTCCATCCT...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAGCTGCAGCCTGCCCTaGTGGTTCATTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGSCSLP*WFILNW
Trigger: CCAATTCAGAATGAACCACCAGGGCAGGCTGCAGCT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAAGAGGAAGAACATCTaGAGCTGCTGGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIKRKNI*SCWHCG
Trigger: GCCACAGTGCCAGCAGCTCCAGATGTTCTTCCTCTT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATGAACCCCCAGCAGTaGCCCCTCGGCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GTWSVYPLIHHSSIILTWMNPQQ*PLGTWN
Trigger: GTTCCAGGTGCCGAGGGGCCACTGCTGGGGGTTCAT...CCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGTGGATGTTGGAAGTaGTTCCGGCTGTTGCTATCT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSGCWK*FRLLLS
Trigger: AGATAGCAACAGCCGGAACCACTTCCAACATCCACT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGGTCCGTCAGGGTGGTaGGCCAGGAAGTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLGPSGW*ARKCRR
Trigger: TCTGCGACACTTCCTGGCCCACCACCCTGACGGACC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTACTTTGATCAGGCTCTaGTACCAGGAGACCGTCATG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKATLIRL*YQETVM
Trigger: CATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAAATGGCGACAGCTCTaGGGGAAGCGGCTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGKWRQL*GKRLRR
Trigger: TCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCCATTT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGACGTCTTTCCTAAGTaGGAGTCCAGAAACACTAGC +
Preference number: 4 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSDVFPK*ESRNTS
Trigger: GCTAGTGTTTCTGGACTCCCACTTAGGAAAGACGTC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGTCCTGGGGCTGTACTaGGAAGGGCTCTCGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKVLGLY*EGLSEN
Trigger: GTTTTCCGAGAGCCCTTCCCAGTACAGCCCCAGGAC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGCAGTGATGTCCAAGTaGGAAGTGAAGACCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITAVMSK*EVKTRR
Trigger: CCTTCGGGTCTTCACTTCCCACTTGGACATCACTGC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGGTGTCATCTCGATaGGAATGTCCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQVSSR*ECPAVM
Trigger: CATCACTGCTGGACATTCCCATCGAGATGACACCTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGTCAAGGCTGAGATaGAGGCCGTTTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQSRLR*RPFFWR
Trigger: TCTCCAGAAAAACGGCCTCCATCTCAGCCTTGACTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGCACTGTGCGGAAGTaGAGACGACTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGTVRK*RRLISR
Trigger: CCTAGAGATCAGTCGTCTCCACTTCCGCACAGTGCC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCATCTTCTCGCCTGCTaGATGGAGGGCAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAHLLAC*MEGNRR
Trigger: TCTTCTATTGCCCTCCATCCAGCAGGCGAGAAGATG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGACTGCTGCTGCAGCATaGTGGCCACCTTATCCTCAA +
Preference number: 4 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSTAAAA*WPPYPQ
Trigger: TTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGT...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGTGCCACTGCGAAGCTaGTTCAGCAGTGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSVPLRS*FSSVSQ
Trigger: CTGTGAGACACTGCTGAACCAGCTTCGCAGTGGCAC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGCTGACCAAGTCGGCTaGCACCTCCTTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKADQVG*HLLLSV
Trigger: CACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGCTGACCAAGTCGGCTaGCACCTCCTTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAADQVG*HLLLSV
Trigger: CACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCGTCCAGGAGAACTATaGATATGGGCAGCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRRPGEL*IWAAAR
Trigger: CCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTACATGGCCAGGGAGATaGAGGCGGCGGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLTWPGR*RRRNSS
Trigger: GGAGGAGTTCCGCCGCCTCCATCTCCCTGGCCATGT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACATTTTGAGGCGTGAATaGACTCGGATCACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHILRRE*TRITVP
Trigger: GGGAACTGTGATCCGAGTCCATTCACGCCTCAAAAT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACAAAGATGCGGACACTaGTGTCTCCAGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGQRCGH*CLQPLR
Trigger: CCTCAATGGCTGGAGACACCAGTGTCCGCATCTTTG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTAAGAGGCCAAGCTTCTaGCTGAGTAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSKRPSF*LSRQKM
Trigger: CATCTTCTGCCTACTCAGCCAGAAGCTTGGCCTCTT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAAGAGGCCAAGCTTCTaGCTGAGTAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAKRPSF*LSRQKM
Trigger: CATCTTCTGCCTACTCAGCCAGAAGCTTGGCCTCTT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCTGGGTCGAAGAGCATaGCTGTTGCACAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKALGRRA*LLHSNA
Trigger: TGCATTACTGTGCAACAGCCATGCTCTTCGACCCAG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGATGCAGCCAGGCAGCTaGGTCGAAGAGCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKMQPGS*VEEHGC
Trigger: ACAGCCATGCTCTTCGACCCAGCTGCCTGGCTGCAT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTGGGATGGGGAGGCCTaGAATGTCTGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAWDGEA*NVCLEL
Trigger: CAGCTCCAAGCAGACATTCCAGGCCTCCCCATCCCA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCATGCTCACCCCATGCTaGGATCCCATGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAMLTPC*DPMLGA
Trigger: AGCTCCCAGCATGGGATCCCAGCATGGGGTGAGCAT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACTGCCTCTGCGGTCCTaGTCCTTTGTAAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGLPLRS*SFVNCL
Trigger: AAGGCAATTTACAAAGGACCAGGACCGCAGAGGCAG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp TCTTCAAGGAGTGGGCATTGCTTGATGGGCAGGAAGTaGAGTGTTCCTTGCAAGGGTGCTGTGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSRSGHCLMGRK*SVPCKGAVARG
Trigger: TCCTCTTGCCACAGCACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTACTGAGGAGAAGGACTaGAGGTGGGCAAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSTEEKD*RWASIW
Trigger: CCAGATGCTTGCCCACCTTCAGTCCTTCTCCTCAGT...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATGAACGATGCTGTCAGGAAGCGTaGAATGCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LCSVFQKRRITWVRYNERCCQEA*NAQALR
Trigger: CCTCAGTGCCTGAGCATTTCACGCTTCCTGACAGCA...TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp CCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATAAAACTGGGCATGGGATaGGTCAGAACCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSKFKGLLREIKQGASRIKLGMG*VRTTGL
Trigger: CAGCCCAGTGGTTCTGACTCATCCCATGCCCAGTTT...TATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCCAGGTGTCTCCTCCCTaGTCCAATCCATCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFQVSPP*SNPSET
Trigger: GGTCTCTGATGGATTGGATCAGGGAGGAGACACCTG...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTGTGCTGGACTTAGCTCTCCTTaGTTCTGGGCATTGTCACTA +
Preference number: 4 (lower is better)
Translates to: SSQASTAVSKSWEVTLCAGLSSP*FWALSL
Trigger: TAGTGACAATGCCCAGAATCAAGGAGAGCTAAGTCC...AGCACAGAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGGGGACTCCCTATCCCTaGCTCAGCTCATCACTCAAC +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQGTPYP*LSSSLN
Trigger: GTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCC...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCCACAAAGGCTAGAGTaGTGCAGGCAACCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRPQRLE*CRQPLC
Trigger: GCAAAGGGGTTGCCTGCATCACTCTAGCCTTTGTGG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGTCAGTGAACTTCTaGTTCAGCACAACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQSVNF*FSTTRY
Trigger: GTACCTGGTTGTGCTGAATCAGAAGTTCACTGACTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGTTAAAGATGACCTGCTaGACATTGTCATATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRLKMTC*TLSYVS
Trigger: AGAGACATATGACAATGTTCAGCAGGTCATCTTTAA...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGGAAGTGGAGACGACTaGTCTCTAGGAACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGGSGDD*SLGTSP
Trigger: AGGAGAAGTTCCTAGAGATCAGTCGTCTCCACTTCC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAGTGCCAAGATGCCCTaGCGAATCATACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSSAKMP*RIILTS
Trigger: GCTGGTCAGTATGATTCGTCAGGGCATCTTGGCACT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTCCAGGGGCCAGGGTaGCATAGCCACATACTCAAT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLQGPG*HSHILN
Trigger: ATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCATGTGCAGCCATCGCTaGCAGGAATTTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIMCSHR*QEFASM
Trigger: CATGGATGCAAATTCCTGGCAGCGATGGCTGCACAT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCATTAGCACCAGGCGATaGATGTGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAISTRR*MCSHRC
Trigger: GCAGCGATGGCTGCACATGCATCGCCTGGTGCTAAT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TCATGGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCGGGATTGGTGTGTCATaGTCCAGGATTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SWPSKFKGLLREIKQGASGIGVS*SRISTR
Trigger: CCTGGTGCTAATCCTGGAGCATGACACACCAATCCC...GCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGGGATTGGTGTGTCATaGTCCAGGATTAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGGIGVS*SRISTR
Trigger: CCTGGTGCTAATCCTGGAGCATGACACACCAATCCC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGCGACTAGTACGAAGCTaGTCCAGTCCCGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTRLVRS*SSPAAE
Trigger: CTCTGCTGCGGGACTGGAGCAGCTTCGTACTAGTCG...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCCGTGGGTGGAGAGCTTaGGGGATCTCAGAATACGTC +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFRGWRA*GISEYV
Trigger: GACGTATTCTGAGATCCCGCAAGCTCTCCACCCACG...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCAGGTGCTTAGATACTACCTTGTCACACTCTGTGCTTaGTGCAAGCTGCGGAATAGC +
Preference number: 4 (lower is better)
Translates to: SVSRRQSTTASQVLRYYLVTLCA*CKLRNS
Trigger: GCTATTCCGCAGCTTGCAGCAAGCACAGAGTGTGAC...AAGGTAGTATCTAAGCACCTGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGTGTACTTGGGAGAGTaGAGGAAGATGAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSVYLGE*RKMSKF
Trigger: GAACTTGCTCATCTTCCTGCACTCTCCCAAGTACAC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCTTGGTAAATGTGATTaGGGCCAAAGTGGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSILGKCD*GQSGVR
Trigger: ACGGACCCCACTTTGGCCGCAATCACATTTACCAAG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TGGTTGATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACTGCTCATATATCTGCTaGAGGAACACCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WLMLCSVFQKRRITWVRYCSYIC*RNTSRW
Trigger: CCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCA...GTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCATCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp ATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGAGCTGCTCATATATCTaGTGCAGGAACACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IMQNVVAAFHRHFHPCYSSCSYI*CRNTSR
Trigger: GCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCT...CGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp AGCCTGGAGGGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGGTAGGACCCAAATGTTaGCATTGCGATGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: SLEGCRRVALRSWCCQEAVGPKC*HCDELH
Trigger: ATGAAGTTCATCGCAATGGCAACATTTGGGTCCTAC...CGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCTCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTAGGCCAGGGCAGGGTTaGTGCTTGCAGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLRPGQG*CLQRPG
Trigger: ACCTGGTCTCTGCAAGCAGCAACCCTGCCCTGGCCT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTTGGATAGTCCTGGGTaGCTCTCCTCTTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRALDSPG*LSSSGG
Trigger: ACCCCCAGAAGAGGAGAGGCACCCAGGACTATCCAA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTGTCTGAGCCACTGCTaGCACCATCATAACCTAGGT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSICLSHC*HHHNLG
Trigger: ACCTAGGTTATGATGGTGGCAGCAGTGGCTCAGACA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCAGGCTCCGTGCATGTaGATACACTTCCACACGGTC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAQAPCM*IHFHTV
Trigger: GACCGTGTGGAAGTGTATGCACATGCACGGAGCCTG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGAAGGGAGTCTCACTaGGCCACAGATCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGRESH*ATDLLH
Trigger: GTGAAGAAGATCTGTGGCGCAGTGAGACTCCCTTCC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTAATGCTGCTCAAAGATaGGGACACTGGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITNAAQR*GHWCLQ
Trigger: CTGGAGACACCAGTGTCCGCATCTTTGAGCAGCATT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGAGGTACCAGGAGGAATaGCCTTGGGACCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKRYQEE*PWDHWF
Trigger: GAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCAGCGGGACAGGGCATaGAAAACTTCATCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAQRDRA*KTSSNK
Trigger: CTTGTTTGATGAAGTTTTCCATGCCCTGTCCCGCTG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTATCCATGGACAGCACTaGCTTCCAGTAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITIHGQH*LPVGSK
Trigger: TTTGCTGCCTACTGGAAGCCAGTGCTGTCCATGGAT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTTGCTTTGTACCCGGTaGGGGAAACGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLLLCTR*GKRSRR
Trigger: CCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TCTACGTTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACATTCAAAGCTCAGCATaGAGCCTATGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: STFTVSTRGLPIPDSAHHIQSSA*SLCRQH
Trigger: ATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAAT...GTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAACGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAATTCAAAGCTCAGCATaGAGCCTATGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGIQSSA*SLCRQH
Trigger: ATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAAT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAACATCTGGAGCTGCTaGCACTGTGGCAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFNIWSC*HCGSNP
Trigger: GGGATTGCTGCCACAGTGCCAGCAGCTCCAGATGTT...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGAACATCTGGAGCTGCTaGCACTGTGGCAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKNIWSC*HCGSNP
Trigger: GGGATTGCTGCCACAGTGCCAGCAGCTCCAGATGTT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCTGCCCCAGGCAGCTCTaGCAAGCAAGAGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFCPRQL*QARGRT
Trigger: TGTTCTTCCTCTTGCTTGCCAGAGCTGCCTGGGGCA...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGTCAGAAACACATGCTaGGGGTTCACAAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGVRNTC*GFTSLA
Trigger: TGCAAGGCTTGTGAACCCCCAGCATGTGTTTCTGAC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGTCATTCCCCTGGACTaGAAGGTCCTTGTTTATAGG +
Preference number: 4 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAVIPLD*KVLVYR
Trigger: CCTATAAACAAGGACCTTCCAGTCCAGGGGAATGAC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCGCCCCTAAGGTGAGCTaGGGACTTAGCAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: WDFVALIPVPPRSFRLGAAPKVS*GLSSEQ
Trigger: TTGCTCACTGCTAAGTCCCCAGCTCACCTTAGGGGC...GGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGTGGGCAGCAATGAGTaGTGTGGGGAGCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAVGSNE*CGELQC
Trigger: ACATTGGAGCTCCCCACACCACTCATTGCTGCCCAC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTATACTCGTTGTGTTCTaGGCCCCCTGGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLILVVF*APWPGH
Trigger: ATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTAT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTGTCCCCAATGGATTTaGCATGGACTGCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSCPQWI*HGLLLG
Trigger: TCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTTGTCCCCAATGGATTTaGCATGGACTGCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKACPQWI*HGLLLG
Trigger: TCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACA...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGATTACAAATGGTAAGTaGAAGGGGGTACTTCGCAGA +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLITNGK*KGVLRR
Trigger: TCTGCGAAGTACCCCCTTCCACTTACCATTTGTAAT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TGGGCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCAAGCTTTACCTCCAATTaGGACCCTCCTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WAALVHRTHHAKCRSRLPSFTSN*DPPLAS
Trigger: ACTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCT...TGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAATGTGAGGGAACGCTCTaGCCCAAATACAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: EPSSPGELNFPYLFQLLECEGTL*PKYKTQ
Trigger: CTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACA...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTACCCTCAGAATCCTCTaGGGACCCAGGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLTLRIL*GPRCLG
Trigger: CCCCAAGCACCTGGGTCCCCAGAGGATTCTGAGGGT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTATTTTGAGGCGTGAATaGACTCGGATCACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSILRRE*TRITVP
Trigger: GGGAACTGTGATCCGAGTCCATTCACGCCTCAAAAT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGGGCAGCGGATGACCTaGGTCAGTTGCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAGQRMT*VSCSNS
Trigger: GGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATGTGGGCAGAGCTTCTaGACACTGAGGCACAACCAA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGCGQSF*TLRHNQ
Trigger: TTGGTTGTGCCTCAGTGTCCAGAAGCTCTGCCCACA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACAGCAGGAATGGGTTTaGCTCCTTTTCATCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGQQEWV*LLFISH
Trigger: GTGCGAGATGAAAAGGAGCCAAACCCATTCCTGCTG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCTGGGTCGAAGAGCATaGCTGTTGCACAGTAATGCA +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSILGRRA*LLHSNA
Trigger: TGCATTACTGTGCAACAGCCATGCTCTTCGACCCAG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACTGCCTCTGCGGTCCTaGTCCTTTGTAAATTGCCTT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGLPLRS*SFVNCL
Trigger: AAGGCAATTTACAAAGGACCAGGACCGCAGAGGCAG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp ATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCGCCAAGCCAGGAAGGTaGCCCGGGTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: IVPCICFCWSLCQKSPFPAKPGR*PGWKVP
Trigger: TGGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGC...GGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp ACAACCAGTAAGTGGTACTGCCAGGAAGCAAACACAGGCAATGTGATTCCAGATGGGACTGCAGTCCAATaGTGGAGGAGTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TTSKWYCQEANTGNVIPDGTAVQ*WRSRPG
Trigger: TCCAGGCCTACTCCTCCATCATTGGACTGCAGTCCC...ATCTGGAATCACATTGCCTGTGTTTGCTTCCTGGCAGTACCACTTACTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTATCCACTCTTGACCCCTaGCCTCGCTACCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLSTLDP*PRYLGT
Trigger: GGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGA...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp AACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAGGGTGTTCCACTCTTaGCCCCTGACCTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: NQLPLMSTVSSLPSLSTFRVFHS*PLTSLP
Trigger: AGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCT...GAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp CTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATGAACGAGAAATGCTCAGGCACTaGGGAGAAGGACTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LCSVFQKRRITWVRYNEREMLRH*GEGLKV
Trigger: CACCTTCAGTCCTTCTCCTCAGTGCCTGAGCATTTC...TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR TCA 90 bp TCCGTGAGCCGGCGACAAAGCACTACTGCTTCTCAGGTGCTTAGATACTACCTTATGGGGCCTTGGAAATaGTACGGACCATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SVSRRQSTTASQVLRYYLMGPWK*YGPCRR
Trigger: CCTTCTACATGGTCCGTATCATTTCCAAGGCCCCAT...AAGGTAGTATCTAAGCACCTGAGAAGCAGTAGTGCTTTGTCGCCGGCTCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCCCCATTCCTTGCTCTaGCACAGCTGTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSPHSLL*HSCIRY
Trigger: ATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCCCTCAGCGCTTCCAGTaGACAGCTGTAGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFPQRFQ*TAVDVD
Trigger: GTCTACATCTACAGCTGTTCACTGGAAGCGCTGAGG...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGAGAGTGCAGGAAGATaGGCAAGTTCTGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKESAGR*ASSAVG
Trigger: ACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCCCCTCAGCCATCACTaGAGTGTCTCTGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRPLSHH*SVSESA
Trigger: AGCACTTTCAGAGACACTTCAGTGATGGCTGAGGGG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGAGGCACAACCAATCTaGACCATAAACTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITEAQPI*TINSIQ
Trigger: CTGGATGGAGTTTATGGTTCAGATTGGTTGTGCCTC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGGTGTCTCCAGCCATTaGGGTGACCAGTGCGGTGAA +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLGVSSH*GDQCGE
Trigger: TTCACCGCACTGGTCACCTCAATGGCTGGAGACACC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGTCTGGTTGATGCTCTaGAGCGTGTTCCAGAAACGC +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRVWLML*SVFQKR
Trigger: GCGTTTCTGGAACACGCTGCAGAGCATCAACCAGAC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTTCGCTGCCAGGAATTTaGATCCATGGACAGCACTGG +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSSLPGI*IHGQHW
Trigger: CCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGA...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TCATGGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAAGAACATCTGGAGCTaGTGGCACTGTGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SWPSKFKGLLREIKQGASKNIWS*WHCGSN
Trigger: ATTGCTGCCACAGTGCCAGCAGCTCCAGATGTTCTT...GCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAAGAACATCTGGAGCTaGTGGCACTGTGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGKNIWS*WHCGSN
Trigger: ATTGCTGCCACAGTGCCAGCAGCTCCAGATGTTCTT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAACTGGGTGCTGCCGACTaGTTGCTCCTTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQLGAAD*LLLRDP
Trigger: GGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAG...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAAAAGTCAGAAACACATaGTGGGGGTTCACAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGKVRNT*WGFTSL
Trigger: AAGGCTTGTGAACCCCCAGCATGTGTTTCTGACTTT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACACTCTGTGCTTGCTaGAAGCTGCGGAATAGCCCA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATLCAC*KLRNSP
Trigger: TGGGCTATTCCGCAGCTTGCAGCAAGCACAGAGTGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGACGGTGGCCACAAGTaGTTCAAAGGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLDGGHK*FKGRAG
Trigger: CCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTCCCATCTCCTCCTCTaGATTAAAGATGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISHLLL*IKDDLL
Trigger: CAGCAGGTCATCTTTAATGCAGAGGAGGAGATGGGA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCTATCTGTTTCAACTaGTGGAAGATGAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHPICFN*WKMKAT
Trigger: TGTAGCCTTCATCTTCCAGCAGTTGAAACAGATAGG...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGCACATGGCCAAAACTaGAGTCATAAGAGTAAACTC +
Preference number: 4 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQAHGQN*SHKSKL
Trigger: GAGTTTACTCTTATGACTGCAGTTTTGGCCATGTGC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGTGGAAATGAAGCACTaGTTTCAGATGTTGACCGGT +
Preference number: 4 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGVEMKH*FQMLTG
Trigger: ACCGGTCAACATCTGAAAGCAGTGCTTCATTTCCAC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGTACACAGCCTTTGTTaGTCGCTCCTGGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: RKDSVLKCASHHCNRALGVHSLC*SLLVNK
Trigger: TTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTAC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTACCAGGCGGGATGACTaGTTCAGGGTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLTRRDD*FRVSSS
Trigger: AGAGCTGGAGACCCTGAAGCAGTCATCCCGCCTGGT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCAGCACAAAACCTATaGTCTGCAGATACTGCACAT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPAQNL*SADTAH
Trigger: ATGTGCAGTATCTGCAGAGCATAGGTTTTGTGCTGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTTCAAATGTCAAATCCTaGAGAGGCCAAACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKASNVKS*RGQTGS
Trigger: TGAGCCTGTTTGGCCTCTGCAGGATTTGACATTTGA...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTTTGCCACTCTTTCATaGTCACCCCATGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSFATLS*SPHAGI
Trigger: GATCCCAGCATGGGGTGAGCATGAAAGAGTGGCAAA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTTTATGCCACTCTGTTTaGCACTCTTTCATGCTCACC +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSLCHSV*HSFMLT
Trigger: GGTGAGCATGAAAGAGTGGCAAACAGAGTGGCATAA...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCACAATGCCAGTAGATaGGCTAAGGTCCAACTCAAT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAHNASR*AKVQLN
Trigger: ATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGACAAGATCTCCCCTGTaGAATCATCCACAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGTRSPL*NHPQCQ
Trigger: CTGGCATTGTGGATGATTCCACAGGGGAGATCTTGT...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCAGCGGGACAGGGCATaGAAAACTTCATCAAACAAG +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIQRDRA*KTSSNK
Trigger: CTTGTTTGATGAAGTTTTCCATGCCCTGTCCCGCTG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCTTCCTCAGAGTAGATaGGCTCTTGGCTTCGGGACA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKLPQSR*ALGFGT
Trigger: TGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCCTTTTCGTTTCACCTTaGGCGTTGGCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FLPIVGERTFLCPPTLSILFVSP*ALAPCF
Trigger: AAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAG...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGCAAGGGCAGTGGACCTaGTGGCTCCAATGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTQGQWT*WLQCQQ
Trigger: TTGCTGACATTGGAGCCACCAGGTCCACTGCCCTTG...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTCCACTGCAGGCGAAGTaGAATCCTTCAGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSPLQAK*NPSESR
Trigger: CCGACTTTCTGAAGGATTCCACTTCGCCTGCAGTGG...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCACTGCAGGCGAAGTaGAATCCTTCAGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPLQAK*NPSESR
Trigger: CCGACTTTCTGAAGGATTCCACTTCGCCTGCAGTGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTAGCTGCAGCCTGCCCTaGTGGTTCATTCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSSCSLP*WFILNW
Trigger: CCAATTCAGAATGAACCACCAGGGCAGGCTGCAGCT...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTAGATCTTTCAGACTaGGAGCCCCACTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRALDLSD*EPHSNP
Trigger: GGGATTGGAGTGGGGCTCCCAGTCTGAAAGATCTAG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGACCAGGAGACCGTCATaGATAGGAAGCAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKTRRPS*IGSSPA
Trigger: AGCTGGACTGCTTCCTATCCATGACGGTCTCCTGGT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGACTTTGATCAGGCTCTaGTACCAGGAGACCGTCATG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSTLIRL*YQETVM
Trigger: CATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGTAGAGGGCTTGAGTTaGCTACGTTCATACTGGGAT +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITVEGLS*LRSYWD
Trigger: ATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGATCTGTTTCAACTGCTaGAAGATGAAGGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLICFNC*KMKATK
Trigger: CTTTGTAGCCTTCATCTTCCAGCAGTTGAAACAGAT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACTTACATGTCTCTGTaGGTGTGCGGAGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATYMSL*VCGEGG
Trigger: ACCCCCTTCTCCGCACACCCACAGAGACATGTAAGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGGGAAGGAAAGGTTTTaGAAAGTACTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITGKERF*KVLEAG
Trigger: TCCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAAGAAGTAGTGGGGATTaGAAGGCACTGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGRSSGD*KALCGS
Trigger: ACTTCCGCACAGTGCCTTCCAATCCCCACTACTTCT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGATTCTCGCCTGCTGGATaGAGGGCAATAGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGFSPAG*RAIEEV
Trigger: TACTTCTTCTATTGCCCTCCATCCAGCAGGCGAGAA...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTGTACCAGCACCTGGTaGGACTGCAGTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRCTSTW*DCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGGTGCTGGTACA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGGTCGGCAGCAGGAATaGGTTTGGCTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRGRQQE*VWLLFI
Trigger: GATGAAAAGGAGCCAAACCCATTCCTGCTGCCGACC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGAGGGGATCACTACTaGTCAATGGTGGGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARGDHY*SMVGAE
Trigger: TTCTGCCCCCACCATTGACCAGTAGTGATCCCCTCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAGGCTCAGAAGGAACTaGCAAGAGGGGATCACTACT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSRLRRN*QEGITT
Trigger: AGTAGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGATGTCTGCTTGGAGCTaGATGTGGCTAAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSMSAWS*MWLRSG
Trigger: CCCTGATCTTAGCCACATCCAGCTCCAAGCAGACAT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTCCGCCAATCTGTCCTaGCTATTCCCCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLSANLS*LFPELS
Trigger: GGAGAGCTCGGGGAATAGCCAGGACAGATTGGCGGA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp GTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTTaGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGA +
Preference number: 4 (lower is better)
Translates to: VTLRTGTWDFVA*IPVPPRSFRLG
Trigger: TCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 72 bp GTGATGCTTGGACTGTCTTCAAGGAGTGGGCATTGCTaGATGGGCAGGAAGTTGAGTGTTCCTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VMLGLSSRSGHC*MGRKLSVPCKG
Trigger: ACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCCCCATTCCTTGCTCTaGCACAGCTGTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAPHSLL*HSCIRY
Trigger: ATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTGACTTAGGTCAACACTaGAGGCACTCACCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSDLGQH*RHSPED
Trigger: ATCTTCCGGTGAGTGCCTTCAGTGTTGACCTAAGTC...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCCTGCATGGGAGTCCGTaGGCCGGCGACAAAGCACTA +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPLHGSP*AGDKAL
Trigger: TAGTGCTTTGTCGCCGGCTCACGGACTCCCATGCAG...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGGGTTTTGGCTCAGGTaGGAAAGGTGGAAACACACA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKGFWLR*ERWKHT
Trigger: TGTGTGTTTCCACCTTTCTCACCTGAGCCAAAACCC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATGGGGATCGTGGAAATaGAGCACTGCTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGWGSWK*STAFRC
Trigger: ACATCTGAAAGCAGTGCTTCATTTCCACGATCCCCA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCAGAGCTTCTGGACACTaGGGCACAACCAATCTGAAC +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRRASGH*GTTNLN
Trigger: GTTCAGATTGGTTGTGCCTCAGTGTCCAGAAGCTCT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGAAGATCTCTGGCTCTaGACCCAAATGCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSEDLWL*TQMLLK
Trigger: TTTGAGCAGCATTTGGGTTCAGAGCCAGAGATCTTC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTAACTGGTTCATCTGGCTaGCACCCAGGGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLTGSSG*HPGGRT
Trigger: TGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGT...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp ATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGTTACTCGAATGAACGAATGGGCTaGCTTAGTGCACAGGACACA +
Preference number: 4 (lower is better)
Translates to: IMQNVVAAFHRHFHPCYSNERMG*LSAQDT
Trigger: TGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATT...CGAGTAACACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATGAACGATCAGGAAGCGTGAAATaGTCAGGCACTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LCSVFQKRRITWVRYNERSGSVK*SGTEEK
Trigger: CTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGA...TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp CCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATAATGTGCAGCCATCGCTaGCAGGAATTTGCATCCATG +
Preference number: 4 (lower is better)
Translates to: PSKFKGLLREIKQGASRIMCSHR*QEFASM
Trigger: CATGGATGCAAATTCCTGGCAGCGATGGCTGCACAT...TATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCCTTGTGCCGGGCCGGTaGTGGTGTGCCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPLVPGR*WCANGK
Trigger: TTTCCCATTGGCACACCAGCACCGGCCCGGCACAAG...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCTGGCAGCAACTTACCTaGCCACGCCTATTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFWQQLT*PRLLVC
Trigger: ACACACTAATAGGCGTGGGCAGGTAAGTTGCTGCCA...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTCGCTGTGCATGCTCCTaGAGCAGGGCACAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RLVGEIPTIVWMSSEQVSRCACS*SRAQWL
Trigger: TAACCACTGTGCCCTGCTGCAGGAGCATGCACAGCG...AGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTGCCTGGGAGGGAGACTaGTGCCTGTGCCAAATTGGT +
Preference number: 4 (lower is better)
Translates to: RLVGEIPTIVWMSSEQVSAWEGD*CLCQIG
Trigger: ACCAATTTGGCACAGGCAGCAGTCTCCCTCCCAGGC...AGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGAGACCCATAGCTGTCTaGCTGCTTGCCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQRPIAV*LLAFLL
Trigger: AAGGAGAAAGGCAAGCAGGCAGACAGCTATGGGTCT...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCAAGATGAGCAAGTTCTaGCGTAGGTACCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRKMSKF*RRYHAR
Trigger: CCTGGCATGGTACCTACGGCAGAACTTGCTCATCTT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCATTGAGAAGCCAGTaGCAGGGTTGCTGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPLRSQ*QGCCED
Trigger: ATCTTCACAGCAACCCTGGCACTGGCTTCTCAATGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGATATTCAGGGTTCAGTaGTTCCCCACTGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKIFRVQ*FPTAQE
Trigger: TTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATAT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGTACACAGCCTTTGTTaGTCGCTCCTGGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGVHSLC*SLLVNK
Trigger: TTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTAC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGGCTCTGAACCCAAATaGTGCTCAAAGATGCGGACA +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAGSEPK*CSKMRT
Trigger: TGTCCGCATCTTTGAGCAGCATTTGGGTTCAGAGCC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTACTGCACATATTGCTaGAGGAAAGCCAAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSYCTYC*RKAKLS
Trigger: GCTGAGCTTGGCTTTCCTGCAGCAATATGTGCAGTA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGACTCAGTATTAAAGTaGGCGTCCCATCATTGCAAC +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITDSVLK*ASHHCN
Trigger: GTTGCAATGATGGGACGCGCACTTTAATACTGAGTC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGATCATATCATCTGGTaGGACTGCAGTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGDHIIW*DCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGATGATATGATC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTTCAGAACCACTGGGCTaGAGGGAGAGCACCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TWSVYPLIHHSSIILTWISEPLG*RESTGV
Trigger: CACCCCGGTGCTCTCCCTCCAGCCCAGTGGTTCTGA...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp CAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTTAGCTCTCCTTGATTCTGCGAAGAACCATGCATaGGGCCTTGGAAATGATACG +
Preference number: 4 (lower is better)
Translates to: QRKPVSLDGMVDLALLDSAKNHA*GLGNDT
Trigger: CGTATCATTTCCAAGGCCCCATGCATGGTTCTTCGC...AGAATCAAGGAGAGCTAAGTCCACCATTCCGTCGAGACTTACAGGCTTACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTTGCTTTGTACCCGGTaGGGGAAACGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPLLCTR*GKRSRR
Trigger: CCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGATTCAAAGCTCAGCATaGAGCCTATGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSIQSSA*SLCRQH
Trigger: ATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAAT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCCCATTAGGTCAAAATaGAAAGGGATCTCATGGACG +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITPIRSK*KGISWT
Trigger: CGTCCATGAGATCCCTTTCCATTTTGACCTAATGGG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGTGTGTACTTATTTCTTaGCTGGGAGCCATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTCVLIS*LGAMAR
Trigger: CCGGGCCATGGCTCCCAGCCAAGAAATAAGTACACA...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGACAGCCTGCCCCATTaGGATTCGGGAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLDSLPH*DSGTFQ
Trigger: CTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTCATGTGGTAAGAGCTaGCGTGATCAGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASCGKS*RDQPRS
Trigger: ACTACGTGGCTGATCACGCCAGCTCTTACCACATGA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGTCATGTGGTAAGAGCTaGCGTGATCAGCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKSCGKS*RDQPRS
Trigger: ACTACGTGGCTGATCACGCCAGCTCTTACCACATGA...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTGTGAGGGAACGCTCTaGCCCAAATACAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSCEGTL*PKYKTQ
Trigger: CTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCAGCATAATCATCACTaGGCAGTGGTGCCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLQHNHH*AVVPAD
Trigger: GTCAGCGGGCACCACTGCCCAGTGATGATTATGCTG...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTAACCGGGACACCATGTaGGCAGAGCTTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLNRDTM*AELLDT
Trigger: AGTGTCCAGAAGCTCTGCCCACATGGTGTCCCGGTT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTATCACTACTGGTCAATaGTGGGGGCAGAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: QILQRPNRLRRNWQEGITITTGQ*WGQKTD
Trigger: ATCTGTTTTCTGCCCCCACCATTGACCAGTAGTGAT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGCACCTAACCCTGTCTaGATCAGAGAAAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGAPNPV*IRESCL
Trigger: TAAGCAGCTTTCTCTGATCCAGACAGGGTTAGGTGC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGCACCTAACCCTGTCTaGATCAGAGAAAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSAPNPV*IRESCL
Trigger: TAAGCAGCTTTCTCTGATCCAGACAGGGTTAGGTGC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGAAAGGGACACCCTCTaGCTCTCTGGCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLERDTL*LSGKQE
Trigger: CTCTTGCTTGCCAGAGAGCCAGAGGGTGTCCCTTTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634258.3
3UTR CAA 72 bp TACCTTGCACAGTCATTCCCCTGGACTGGAAGGTCCTaGTTTATAGGGACTTGGTCTGTGTACCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: YLAQSFPWTGRS*FIGTWSVYPLI
Trigger: GATAAGGGGGTACACAGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCAGGGGAATGACTGTGCAAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
3UTR CAA 72 bp GGTAGTGATGCTTGGACTGTCTTCAAGGAGTGGGCATaGCTTGATGGGCAGGAAGTTGAGTGTTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: GSDAWTVFKEWA*LDGQEVECSLQ
Trigger: TTGCAAGGAACACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCTTGAAGACAGTCCAAGCATCACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAAGCCGGCCCGGGCCAGTaGGGGTGTTCCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQAGPGQ*GCSTLD
Trigger: GTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGC...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp AGGACAGGGACGTGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGTTCAAGGGTTTGCTaGGGGAAATCAAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RTGTWDFVALIPVPPRSFSSRVC*GKSSKE
Trigger: CTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACT...GAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCACGTCCCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACTTAAAGATGACCTGCTaGACATTGTCATATGTCTCT +
Preference number: 4 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHLKMTC*TLSYVS
Trigger: AGAGACATATGACAATGTTCAGCAGGTCATCTTTAA...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGTGAAATGCTCAGGCACATGTTGCCATTGCGATaGACTTCATTAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: EEWHSALGAVRKREMLRHMLPLR*TSLIPH
Trigger: ATGTGGAATTAATGAAGTTCATCGCAATGGCAACAT...GTGCCTGAGCATTTCACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGTGCTTTGCACGCTTGTaGTTGCAGGGTATTATCAAT +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGCFARL*LQGIIN
Trigger: ATTGATAATACCCTGCAAGCACAAGCGTGCAAAGCA...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGAATGAACGAATGGGCTaGCTTAGTGCACAGGACACA +
Preference number: 4 (lower is better)
Translates to: KFKGLLREIKQGASRIWQNERMG*LSAQDT
Trigger: TGTGTCCTGTGCACTAAGGCAGCCCATTCGTTCATT...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTTGGGCGTTGGCTCCTTaGTTTGTACCCGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TWSVYPLIHHSSIILTWIWALAP*FVPGGG
Trigger: TCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCA...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAATGTCAGCAAGAAGGGTaGCCGGTAGTCCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQCQQEG*PVVQGQ
Trigger: CTGCCCTTGGACTACCGGGCACCCTTCTTGCTGACA...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTAGCTGCTCATATATCTaGTGCAGGAACACCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLSCSYI*CRNTSR
Trigger: GCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTGATGCTCTGCAGCGTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATATATTCAGGGTTCAGTaGTTCCCCACTGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LMLCSVFQKRRITWVRYNIFRVQ*FPTAQE
Trigger: TTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATAT...ATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACACGCTGCAGAGCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTAGCATCTCCTGGGGTGTaGCCTGCACAGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLASPGV*PAQFGA
Trigger: TGCACCAAACTGTGCAGGCCACACCCCAGGAGATGC...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp ACAACCAGTAAGTGGTACTGCCAGGAAGCAAACACAGGCAATGTGATTCCAGATGTGAAACCCTGTCTCTaGTGGGACTGCAGTCCAATG +
Preference number: 4 (lower is better)
Translates to: TTSKWYCQEANTGNVIPDVKPCL*WDCSPM
Trigger: CATTGGACTGCAGTCCCACCAGAGACAGGGTTTCAC...ATCTGGAATCACATTGCCTGTGTTTGCTTCCTGGCAGTACCACTTACTGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGCCCTTGTCAGATGGGTaGTTTGCAAATATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGPLSDG*FANIFS
Trigger: GGAGAAAATATTTGCAAACCACCCATCTGACAAGGG...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAAACGCCGGATAACATaGGTACGATACAATGAACGA +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGKRRIT*VRYNER
Trigger: TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCACTTCCACCCGTGAAACGCCGGATAACATaGGTACGATACAATGAACGA +
Preference number: 4 (lower is better)
Translates to: RTHHAKCRSRLPSSLPPVKRRIT*VRYNER
Trigger: TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTT...CACGGGTGGAAGTGACGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CCA 90 bp GGGACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGGCAGCAAACTGGGCATaGGATGAGTCAGAACCACTG +
Preference number: 4 (lower is better)
Translates to: GTWSVYPLIHHSSIILTWAANWA*DESEPL
Trigger: CAGTGGTTCTGACTCATCCCATGCCCAGTTTGCTGC...CCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GCTTCTCAGGTGCTTAGATACTACCTTGCACAGTCATTCCCCTGGACTGGAAGGCCCATTAGGTCAAAATaGAAAGGGATCTCATGGACG +
Preference number: 4 (lower is better)
Translates to: ASQVLRYYLAQSFPWTGRPIRSK*KGISWT
Trigger: CGTCCATGAGATCCCTTTCCATTTTGACCTAATGGG...CCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAGCACCTGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCTATCAAGTGTATTCATaGCCTAGCAAGTTCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLYQVYS*PSKFKG
Trigger: ACCCTTGAACTTGCTAGGCCATGAATACACTTGATA...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACATTGTTTATAGGGACTTaGTCTGTGTACCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTLFIGT*SVYPLI
Trigger: GATAAGGGGGTACACAGACCAAGTCCCTATAAACAA...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCACATCAAAGTCATCCTaGTGTCGAAGTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRTSKSS*CRSPSE
Trigger: CTCTGAGGGACTTCGACACCAGGATGACTTTGATGT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTATCTGTTTCAACTGCTaGAAGATGAAGGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSICFNC*KMKATK
Trigger: CTTTGTAGCCTTCATCTTCCAGCAGTTGAAACAGAT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTCTGGTCTGTCTGGTTaGTGCTCTGCAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPSGLSG*CSAACS
Trigger: GGAACACGCTGCAGAGCATCAACCAGACAGACCAGA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCCCTGTGCCAAATTGGTaGGGAAGGCTGCATGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPPVPNW*GRLHGS
Trigger: ACTCCCATGCAGCCTTCCTCACCAATTTGGCACAGG...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTTTGGGATTACAGGAGTaGGTGACTGTAATATTTCAT +
Preference number: 4 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGLGLQE*VTVIFH
Trigger: ATGAAATATTACAGTCACTCACTCCTGTAATCCCAA...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAAAAACTCCAGGTCACTaGTTTTTCTGTCTACTGTGT +
Preference number: 4 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGKTPGH*FFCLLC
Trigger: ACACAGTAGACAGAAAAATCAGTGACCTGGAGTTTT...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTATGTTGCCATTGCGATaGACTTCATTAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAMLPLR*TSLIPH
Trigger: ATGTGGAATTAATGAAGTTCATCGCAATGGCAACAT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGTAGGACCCAAATGTTaGCATTGCGATGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGVGPKC*HCDELH
Trigger: ATGAAGTTCATCGCAATGGCAACATTTGGGTCCTAC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGGTGGAAATGAAGCACTaGTTTCAGATGTTGACCGGT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKVEMKH*FQMLTG
Trigger: ACCGGTCAACATCTGAAAGCAGTGCTTCATTTCCAC...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGATACTGCACATATTaGTGCAGGAAAGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARYCTY*CRKAKL
Trigger: GAGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTCAAATGTCAAATCCTaGAGAGGCCAAACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRSNVKS*RGQTGS
Trigger: TGAGCCTGTTTGGCCTCTGCAGGATTTGACATTTGA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCACAGGAGGAATGGCCTTaGGACCACTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPQEEWP*DHWFIW
Trigger: CCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTG...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAAGGTACCAGGAGGAATaGCCTTGGGACCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPRYQEE*PWDHWF
Trigger: GAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCT...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp AACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAACCCTGTCTCTGGTaGGACTGCAGTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: NQLPLMSTVSSLPSLSTFKPCLW*DCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGAGACAGGGTTT...GAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp TCATGGCCTAGCAAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAAACGCCGGATAACATaGGTACGATACAATGAACGA +
Preference number: 4 (lower is better)
Translates to: SWPSKFKGLLREIKQGASKRRIT*VRYNER
Trigger: TCGTTCATTGTATCGTACCCATGTTATCCGGCGTTT...GCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTGGAAAGGGATCTCATaGACGCAGGTGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPWKGIS*TQVSPP
Trigger: GGGAGGAGACACCTGCGTCCATGAGATCCCTTTCCA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTACTTATTTCTTGGCTaGGAGCCATGGCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPYLFLG*EPWPGE
Trigger: CTCGCCGGGCCATGGCTCCCAGCCAAGAAATAAGTA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTGCAGCAGGGCACAGTaGTTAGCTGCCTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPCSRAQ*LAASLY
Trigger: GTACAAGGAGGCAGCTAACCACTGTGCCCTGCTGCA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTGAGAGGACCAGGACTTaGGGGTGCATGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TWSVYPLIHHSSIILTWIERTRT*GCMRQT
Trigger: GGTTTGCCTCATGCACCCCCAAGTCCTGGTCCTCTC...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGATTACAAATGGTAAGTaGAAGGGGGTACTTCGCAGA +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSITNGK*KGVLRR
Trigger: TCTGCGAAGTACCCCCTTCCACTTACCATTTGTAAT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTATGTCTGCTTGGAGCTaGATGTGGCTAAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLMSAWS*MWLRSG
Trigger: CCCTGATCTTAGCCACATCCAGCTCCAAGCAGACAT...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAAGCCAAGCCAGGAAGGTaGCCCGGGTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQAKPGR*PGWKVP
Trigger: TGGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGC...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGAAACTAAAAATTAGCTaGGTGGTGAAATGCACCTGT +
Preference number: 4 (lower is better)
Translates to: ARPSMENTASTRVYAERGKLKIS*VVKCTC
Trigger: ACAGGTGCATTTCACCACTCAGCTAATTTTTAGTTT...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp TGGGACTTTGTAGCTTTGATCCCAGTTCCTCCTAGATCTTTCAGACTGGGAGCCAGGGAAAATGGAACTTaGCCAACTCCCTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: WDFVALIPVPPRSFRLGARENGT*PTPLSD
Trigger: ATCACTTAAGGGAGTTGGTCAAGTTCCATTTTCCCT...GGCTCCCAGTCTGAAAGATCTAGGAGGAACTGGGATCAAAGCTACAAAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTCAACTGCTGGAAGATaGAGGCTACAAAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLSTAGR*RLQRLR
Trigger: ACGAAGCCTTTGTAGCCTTCATCTTCCAGCAGTTGA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGAAAACTCCAGGTCACTaGTTTTTCTGTCTACTGTGT +
Preference number: 4 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSKTPGH*FFCLLC
Trigger: ACACAGTAGACAGAAAAATCAGTGACCTGGAGTTTT...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGAAGATCTCTGGCTCTaGACCCAAATGCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLEDLWL*TQMLLK
Trigger: TTTGAGCAGCATTTGGGTTCAGAGCCAGAGATCTTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp ATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCTGTCTCTGGTGGGACTaGAGTCCAATGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IVPCICFCWSLCQKSPFPCLWWD*SPMMEE
Trigger: CTCCTCCATCATTGGACTGCAGTCCCACCAGAGACA...GGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTATTAGCACCAGGCGATaGATGTGCAGCCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: TWSVYPLIHHSSIILTWIISTRR*MCSHRC
Trigger: GCAGCGATGGCTGCACATGCATCGCCTGGTGCTAAT...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCCTATCTGTTTCAACTaGTGGAAGATGAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKPICFN*WKMKAT
Trigger: TGTAGCCTTCATCTTCCAGCAGTTGAAACAGATAGG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR GCA 90 bp GTGTTCCAGAAACGCCGGATAACATGGGTACGATACAATGAACGAATGGGCTGCGCACATGGCCAAAACTaGAGTCATAAGAGTAAACTC +
Preference number: 4 (lower is better)
Translates to: VFQKRRITWVRYNERMGCAHGQN*SHKSKL
Trigger: GAGTTTACTCTTATGACTGCAGTTTTGGCCATGTGC...GCAGCCCATTCGTTCATTGTATCGTACCCATGTTATCCGGCGTTTCTGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR GCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGTAGGACCCAAATGTTaGCATTGCGATGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRVGPKC*HCDELH
Trigger: ATGAAGTTCATCGCAATGGCAACATTTGGGTCCTAC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAAGAAGCGGACAGACAGTaGATGAAGTCGCCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQEADRQ*MKSPGV
Trigger: CACACCCGGCGACTTCATCCACTGTCTGTCCGCTTC...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCAAATACAAAACTCAGTaGCAGAGTTTGGCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRKYKTQ*QSLAKA
Trigger: TGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR TCA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGGGATGGGGATTTCTATaGAACAGAGTAGCGATAACT +
Preference number: 4 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTGWGFL*NRVAIT
Trigger: AGTTATCGCTACTCTGTTTCATAGAAATCCCCATCC...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAATGACAAACCGATACTaGCAAGCCAGGAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPMTNRY*QARKVT
Trigger: GGTCACCTTCCTGGCTTGGCAGTATCGGTTTGTCAT...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp GCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCCTTCTTTGAATGGTTAACCTCAAAAACTCAGTTCAAATaGTGCTTTGGGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: AGPSVRKVHFPFFEWLTSKTQFK*CFGPGT
Trigger: TGTGCCTGGCCCAAAGCAGCATTTGAACTGAGTTTT...TGAGGTTAACCATTCAAAGAAGGGGAAATGGACTTTTCTGACAGAGGGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAACCAGTAAGTGGTACTaGCAGGAAGCAAACACAGGC +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPTSKWY*QEANTG
Trigger: GCCTGTGTTTGCTTCCTGGCAGTACCACTTACTGGT...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp AGTTCCAATCTAGGAGTCATCAGCATATCCATCCTTCTAGTTCTTCTGTTTCCCTCAGGAAGCGTGAAATaGTCAGGCACTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSNLGVISISILLVLLFPSGSVK*SGTEEK
Trigger: CTTCTCCTCAGTGCCTGAGCATTTCACGCTTCCTGA...GGGAAACAGAAGAACTAGAAGGATGGATATGCTGATGACTCCTAGATTGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CCA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGTGGTTCATTCTGAATTaGAAGCTCCAGAACCATGTT +
Preference number: 4 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKWFILN*KLQNHV
Trigger: AACATGGTTCTGGAGCTTCCAATTCAGAATGAACCA...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CCA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTGGTTCATTCTGAATTaGAAGCTCCAGAACCATGTT +
Preference number: 4 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAWFILN*KLQNHV
Trigger: AACATGGTTCTGGAGCTTCCAATTCAGAATGAACCA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
3UTR CAA 72 bp TATCAAGTGTATTCATGGCCTAGCAAGTTCAAGGGTTaGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: YQVYSWPSKFKG*LREIKQGASRI
Trigger: TATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTTGCTAGGCCATGAATACACTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAAAGGGTGTTCCACTCTTaGCCCCTGACCTCGCTACCT +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQRVFHS*PLTSLP
Trigger: AGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCT...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp CACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTACTCAGGCTGGAAGTCGATaGAAGATCCAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: HLCLQSPLYHPFPHSNFTQAGSR*KIQALG
Trigger: TCCGAGTGCCTGGATCTTGCATCGACTTCCAGCCTG...AGTAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp ATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCACTCAGTTCAAATGCTaGTTTGGGCCAGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: IVPCICFCWSLCQKSPFPTQFKC*FGPGTV
Trigger: TACTGTGCCTGGCCCAAAGCAGCATTTGAACTGAGT...GGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCGCATCTCCTGGGGTGTaGCCTGCACAGTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIASPGV*PAQFGA
Trigger: TGCACCAAACTGTGCAGGCCACACCCCAGGAGATGC...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAACAAGATCTCCCCTGTaGAATCATCCACAATGCCAG +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPTRSPL*NHPQCQ
Trigger: CTGGCATTGTGGATGATTCCACAGGGGAGATCTTGT...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTACAGCGGGACAGGGCATaGAAAACTTCATCAAACAAG +
Preference number: 4 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLQRDRA*KTSSNK
Trigger: CTTGTTTGATGAAGTTTTCCATGCCCTGTCCCGCTG...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR CAA 72 bp GAAAAAGGTCACAGATGCACAGAAAGGTTAAGTAACTaGCTCAAGGACACACAACCAGTAAGTGGTACTGCC +
Preference number: 4 (lower is better)
Translates to: EKGHRCTERLSN*LKDTQPVSGTA
Trigger: GGCAGTACCACTTACTGGTTGTGTGTCCTTGAGCAAGTTACTTAACCTTTCTGTGCATCTGTGACCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp CAATCACCATATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QSPYDISNVNIPFGKRSQQGAGH*GLPIPV
Trigger: AACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTG...CTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATATGGTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIQGAGH*GLPIPV
Trigger: AACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTG...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCGATGGGAAGATCGCTTaGGCCCAGGAGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIDGKIA*AQELET
Trigger: GGTCTCTAACTCCTGGGCTCAAGCGATCTTCCCATC...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAACCAACTCCCTTAAGTaGTACCTCACACTCATTAGC +
Preference number: 4 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQTNSLK*YLTLIS
Trigger: GCTAATGAGTGTGAGGTATCACTTAAGGGAGTTGGT...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR GCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAACAGGCTGGAAGTCGATaGAAGATCCAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQQAGSR*KIQALG
Trigger: TCCGAGTGCCTGGATCTTGCATCGACTTCCAGCCTG...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp ACAACCAGTAAGTGGTACTGCCAGGAAGCAAACACAGGCAATGTGATTCCAGATATAGTACCATGTATTTaGTTTTGCTGGTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TTSKWYCQEANTGNVIPDIVPCI*FCWSLC
Trigger: ACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT...ATCTGGAATCACATTGCCTGTGTTTGCTTCCTGGCAGTACCACTTACTGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAACAGGAGGAATGGCCTTaGGACCACTGGTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQQEEWP*DHWFIW
Trigger: CCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTG...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCAGGTACCAGGAGGAATaGCCTTGGGACCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIRYQEE*PWDHWF
Trigger: GAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAACAGCGAGACCTTCTATaGAGAACACAGCCAGTACCA +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQQRDLL*RTQPVP
Trigger: TGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGCTG...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR CAA 72 bp TTGAGAGTACAGGTTCATAGTACCATGTATTTGCTTTaGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LRVQVHSTMYLL*LVPLSEKSISP
Trigger: AGGGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCTGTACTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp TATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGATGCACAGAACAGTTTGGTGCAGATaGCTGAGGAACCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: YDISNVNIPFGKRSQMHRTVWCR*LRNQAR
Trigger: CCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGT...TCTGTGCATCTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCACAGTTTGGTGCAGATaGCTGAGGAACCAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLITVWCR*LRNQAR
Trigger: CCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCGGCAGGCAGTTCCTCTaGCTGTTTCAGGAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIGRQFL*LFQERF
Trigger: AAACCTCTCCTGAAACAGGCAGAGGAACTGCCTGCC...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
3UTR CAA 72 bp ATGAAATTCACAGATTGGTTGGGGAGATTCCTACTATaGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCA +
Preference number: 4 (lower is better)
Translates to: MKFTDWLGRFLL*CGCPQNKSLRS
Trigger: TGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCAATTCCTGTTCAGACTaGAGCAGCATCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLINSCSD*SSISWG
Trigger: ACCCCAGGAGATGCTGCTTCAGTCTGAACAGGAATT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAACACATTGTCTGCTGCTaGCATACAGAAATGCTACTG +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQHIVCC*HTEMLL
Trigger: CAGTAGCATTTCTGTATGTCAGCAGCAGACAATGTG...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR TCA 90 bp ATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCCCATTTCCCCTTCTTTaGATGGTTAACCTCAATTCT +
Preference number: 4 (lower is better)
Translates to: IVPCICFCWSLCQKSPFPPFPLL*MVNLNS
Trigger: AGAATTGAGGTTAACCATTCAAAGAAGGGGAAATGG...GGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR TCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCGAGGCGGGCAAATCATaGTGTCAAGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIEAGKS*CQEFKT
Trigger: GGTCTTGAACTCTTGACATCATGATTTGCCCGCCTC...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCATCATCTGGTGGGACTaGAGTCCAATGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIIIWWD*SPMMEE
Trigger: CTCCTCCATCATTGGACTGCAGTCCCACCAGATGAT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCCCAAGAGATCAAGGCTaGAGTGAGCTGTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIPRDQG*SELCSH
Trigger: GTGTGAACACAGCTCACTGCAGCCTTGATCTCTTGG...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAACACAATGCCAGTAGATaGGCTAAGGTCCAACTCAAT +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQHNASR*AKVQLN
Trigger: ATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTG...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp AGGTTCATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCAGAAAAAGGTCACAGATaGACAGAAAGGTTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: RFIVPCICFCWSLCQKSPEKGHR*TERLSN
Trigger: GTTACTTAACCTTTCTGTGCATCTGTGACCTTTTTC...TGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTATGAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR GCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCTGTCCATTTTTGCTTTaGACGCTTGTGCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLICPFLL*TLVLAG
Trigger: CCCTGCAAGCACAAGCGTGCAAAGCAAAAATGGACA...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAACAGCGGGACAGGGCATaGAAAACTTCATCAAACAAG +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQQRDRA*KTSSNK
Trigger: CTTGTTTGATGAAGTTTTCCATGCCCTGTCCCGCTG...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp CAATCACCATATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGCACACAACCAGTAAGTaGTACTGCCAGGAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QSPYDISNVNIPFGKRSQHTTSK*YCQEAN
Trigger: GTTTGCTTCCTGGCAGTACCACTTACTGGTTGTGTG...CTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATATGGTGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp TATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGATGCACAGACACAATGCCAGTAGATaGGCTAAGGTCCAACTCAAT +
Preference number: 4 (lower is better)
Translates to: YDISNVNIPFGKRSQMHRHNASR*AKVQLN
Trigger: ATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTG...TCTGTGCATCTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp ATAGTACCATGTATTTGCTTTTGCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCTTCCCCTTCTTTGAATaGTTAACCTCAATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: IVPCICFCWSLCQKSPFPFPFFE*LTSILS
Trigger: AGAAAGAATTGAGGTTAACCATTCAAAGAAGGGGAA...GGGAAATGGACTTTTCTGACAGAGGGACCAGCAAAAGCAAATACATGGTACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CCA 90 bp CACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTACTTTAGTGTCACATTCATaGCCTTTCATAACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLCLQSPLYHPFPHSNFTLVSHS*PFITSS
Trigger: GGAGCTGGTTATGAAAGGCCATGAATGTGACACTAA...AGTAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
3UTR CAA 72 bp GATGTGATCCTATTTGTCCATTTTTGCTTTGCACGCTaGTGCTTGCAGGGTATTATCAATAAATCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DVILFVHFCFAR*CLQGIINKSLS
Trigger: GCTCAAAGATTTATTGATAATACCCTGCAAGCACAAGCGTGCAAAGCAAAAATGGACAAATAGGATCACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR GCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAAGATCTCTTTACAATCTaGACAGCCTATTGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQDLFTI*TAYCEY
Trigger: ATACTCACAATAGGCTGTGCAGATTGTAAAGAGATC...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCAAAGATCATATCATCTaGTGGGACTGCAGTCCAATG +
Preference number: 4 (lower is better)
Translates to: HEHGISFQFLESTSISLIKDHII*WDCSPM
Trigger: CATTGGACTGCAGTCCCACCAGATGATATGATCTTT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAATTCATTGTAGATATATaGCTTCTGGGTTCTCTATTC +
Preference number: 4 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQFIVDI*LLGSLF
Trigger: GAATAGAGAACCCAGAAGCCATATATCTACAATGAA...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CCA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAACCCAATGTATGTTCTTaGCATCTGTCAAAAATGAGT +
Preference number: 4 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQPNVCS*HLSKMS
Trigger: ACTCATTTTTGACAGATGCCAAGAACATACATTGGG...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCTACGCCGGCCCGCTTaGCTGGGTGGAGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPLRRPA*LGGVTG
Trigger: GCCTGTGACTCCACCCAGCAAAGCGGGCCGGCGTAG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp GCCCTCCAGCCAGCCGCACCAGCTGAGCCAGCCGTGCTCGTGCCATaGCCACCTCTGCAGCCAGTGGTGGGAACAGAGGAGCCGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ALQPAAPAEPAVLVP*PPLQPVVGTEEPVQ
Trigger: CTGGACCGGCTCCTCTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTGGTGCGGCTGGCTGGAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp GCAGTGCCCTCCAGCCAGCCGCACCAGCTGAGCCAGCCGTGCTCGTaGCATGCCCACCTCTGCAGCCAGTGGTGGGAACAGAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: AVPSSQPHQLSQPCS*HAHLCSQWWEQRSR
Trigger: CCGGCTCCTCTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTGGTGCGGCTGGCTGGAGGGCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp CCGACGGCAGTGCCCTCCAGCCAGCCGCACCAGCTGAGCCAGCCGTaGTCGTGCCATGCCCACCTCTGCAGCCAGTGGTGGGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: PTAVPSSQPHQLSQP*SCHAHLCSQWWEQR
Trigger: CCTCTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTGGTGCGGCTGGCTGGAGGGCACTGCCGTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCGTTGGCTCCTTGCTTaGTACCCGGTGGGGGAAACG +
Preference number: 5 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRRWLLA*YPVGET
Trigger: CGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGTGCTGCCGACTGCTaGCTCCTTCGGGATCCCATG +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGAADC*LLRDPM
Trigger: CATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGATGCAGGCAACCCCTTaGCCCCCAGTGCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRMQATP*PPVPCP
Trigger: TGGACAGGGCACTGGGGGCAAAGGGGTTGCCTGCAT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGACAGTCAGACCCAGGTaGCCTGGCTCCGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRTVRPR*PGSGSG
Trigger: TCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGT...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CAAAGGGTGTCCCGACGGCAGTGCCCTCCAGCCAGCCGCACCAGCTaGGCCAGCCGTGCTCGTGCCATGCCCACCTCTGCAGCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: QRVSRRQCPPASRTS*ASRARAMPTSAASG
Trigger: ACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTGGTGCGGCTGGCTGGAGGGCACTGCCGTCGGGACACCCTTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp CCTCACGGGCTCCCGGGGGCGACACATCCAAGGATTCACAGCTTGTaGGGGCCTCTCGGCTCCCAGACCCTGACTCAGGGCGATGGCGCC +
Preference number: 5 (lower is better)
Translates to: PHGLPGATHPRIHSL*GPLGSQTLTQGDGA
Trigger: GGCGCCATCGCCCTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGGATGTGTCGCCCCCGGGAGCCCGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCAAGCGCTGCATGGCTTaGGCAGCCTGCTGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRKRCMA*AACCVG
Trigger: ACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCTT...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTACGCCGGCCCGCTTaGCTGGGTGGAGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKALRRPA*LGGVTG
Trigger: GCCTGTGACTCCACCCAGCAAAGCGGGCCGGCGTAG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CCTGTGGCCTGGGTGCTGCCGACTGCTTGCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCCTCGGCACCTCTGGCAAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PVAWVLPTACSFGIP*TPSSGPSAPLASKR
Trigger: CCTCTTGCTTGCCAGAGGTGCCGAGGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCAGGCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562955.2
CDS TCA 90 bp ATCCAAGGATTCACAGCTTGTGGGGGCCTCTCGGCTCCCAGACCCTaGCTCAGGGCGATGGCGCCGCTGCCCGTCAGGGGGTCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: IQGFTACGGLSAPRP*LRAMAPLPVRGSRG
Trigger: ACCTCTGGACCCCCTGACGGGCAGCGGCGCCATCGCCCTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCCTTTTCGTTTCACCTaGGGCGTTGGCTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRPFRFT*GVGSLL
Trigger: AAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGGTGCTGCCGACTGCTaGCTCCTTCGGGATCCCATG +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHGAADC*LLRDPM
Trigger: CATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGGCTCCCATCAGTCTaGGTTTTAGGGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGLPSV*VLGQEK
Trigger: CTTCTCCTGCCCTAAAACCAAGACTGATGGGAGCCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAGTGGCTGTGGGTGTTaGGGGAGGGCGGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRSGCGC*GRAVPA
Trigger: AGCAGGAACCGCCCTCCCCAAACACCCACAGCCACT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCACTGCTTTCAGATGTaGACCGGTGGTGCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRHCFQM*TGGAEG
Trigger: ACCCTCAGCACCACCGGTCAACATCTGAAAGCAGTG...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAAGCGCTGCATGGCTTaGGCAGCCTGCTGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPKRCMA*AACCVG
Trigger: ACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCTT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp GGGGTCCGTCAGGGTGGTGGGCCAGGAAGTGTCGCAGAAAGGTGGTaGGGTGGTAGCCGTGCCGCAGCACCAGATGGGCACCTAGCACGT +
Preference number: 5 (lower is better)
Translates to: GVRQGGGPGSVAERW*GGSRAAAPDGHLAR
Trigger: ACGTGCTAGGTGCCCATCTGGTGCTGCGGCACGGCTACCACCTCACCACCTTTCTGCGACACTTCCTGGCCCACCACCCTGACGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp CAGGTGGAGCGTCCAGGAGAACTATGGATATGGGCAGCTGCGCGGTaGAGGGCAGGACTCTGTGGGATGCCCCCTCTTCGGAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: QVERPGELWIWAAAR*RAGLCGMPPLRSAP
Trigger: GGGGGCACTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 90 bp GCCTGGTCAACGGGGGTCAGTGGGATCTCCCGGTCACTCAGCTCCTaGCCCAGGCAGCTGTGCAGCAGGCACAGCACCATGTCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: AWSTGVSGISRSLSS*PRQLCSRHSTMSLA
Trigger: TGCCAACGACATGGTGCTGTGCCTGCTGCACAGCTGCCTGGGGCAGGAGCTGAGTGACCGGGAGATCCCACTGACCCCCGTTGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS CCA 90 bp CCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGTCAGTaGGATCTCCCGGTCACTCAGCTCCTGCCCCAGGCAGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PQHLTQEGSLVNGGQ*DLPVTQLLPQAALA
Trigger: TGCCAGAGCTGCCTGGGGCAGGAGCTGAGTGACCGGGAGATCCCACTGACCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGAGTGGCACTCCGCTCTaGGTGCTGTCAGGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGSGTPL*VLSGSV
Trigger: CACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGCCTGGACCCCACATTaGTCCACATCTGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHAWTPH*STSVPR
Trigger: CCTGGGGACAGATGTGGACAAATGTGGGGTCCAGGC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp GCGAAGGCAGGTGGAGCGTCCAGGAGAACTATGGATATGGGCAGCTaGGCGGTGCAGGGCAGGACTCTGTGGGATGCCCCCTCTTCGGAG +
Preference number: 5 (lower is better)
Translates to: AKAGGASRRTMDMGS*AVQGRTLWDAPSSE
Trigger: CTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 90 bp AGAGGACCCACTCAGTCGGCCCTGCTCACGGCTCAGCGGGGGACTTaGACTCCGGATGAGGGTCTCCACTTCCATGGTCGGCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: RGPTQSALLTAQRGT*TPDEGLHFHGRQQE
Trigger: TTCCTGCTGCCGACCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGCCGTGAGCAGGGCCGACTGAGTGGGTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp CGGAAGCGGCGCATGTCAGCAGTGAGCCTGGGGAAGAGCTCTCGCTaGCTGGTGAGCACCACGAAGAACTGTAGCCGCAGAACGTGCCGC +
Preference number: 5 (lower is better)
Translates to: RKRRMSAVSLGKSSR*LVSTTKNCSRRTCR
Trigger: GCGGCACGTTCTGCGGCTACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGCTCTTCCCCAGGCTCACTGCTGACATGCGCCGCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000648058.1
ENST00000649403.1
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCCGTTGGCTCCTTGCTTaGTACCCGGTGGGGGAAACG +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPRWLLA*YPVGET
Trigger: CGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACG...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCTGCTTCCCTCCCATaGAGAAGCCAGTGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPAASLP*RSQCQG
Trigger: ACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAGC...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCGGCGGAACTCCTCCTaGAATTGTGTGAGGGAACGC +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHRRNSS*NCVRER
Trigger: GCGTTCCCTCACACAATTCAAGGAGGAGTTCCGCCG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGATGCTGGGCCCCATTTaGAGGCGTGAATGGACTCGG +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRMLGPI*RREWTR
Trigger: CCGAGTCCATTCACGCCTCAAAATGGGGCCCAGCAT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGCCTCTTCTAGCTGTGTaGTCCGGCGCTTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPPLLAV*SGAFVS
Trigger: AGAGACAAAAGCGCCGGACAACACAGCTAGAAGAGG...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGCGCCAGATACTGCACATATaGCTGCAGGAAAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RASRPSRWPGRTRRRLRRQILHI*LQESQA
Trigger: AGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCTG...GCGCCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGTTGATGGGCAGGAAGTaGAGTGTTCCTTGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRLMGRK*SVPCKG
Trigger: ACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAA...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CTGGCTGTCAGGGTCTCCCCTTCGATGCCTTCAGCCCTGTCCTCATaGCTGTGCCAAGCCCAGGCCGCTGAAGAAGGCTCCCCATGGGAC +
Preference number: 5 (lower is better)
Translates to: LAVRVSPSMPSALSS*LCQAQAAEEGSPWD
Trigger: GTCCCATGGGGAGCCTTCTTCAGCGGCCTGGGCTTGGCACAGTCATGAGGACAGGGCTGAAGGCATCGAAGGGGAGACCCTGACAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp TCAGTCGGCCCTGCTCACGGCTCAGCGGGGGACTTGCACTCCGGATaGGGGTCTCCACTTCCATGGTCGGCAGCAGGAATGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SVGPAHGSAGDLHSG*GSPLPWSAAGMGLA
Trigger: AGCCAAACCCATTCCTGCTGCCGACCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGCCGTGAGCAGGGCCGACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp GGTGACCCGGGTGGAAGGTACCAGGAGGAATGGCCTTGGGACCACTaGTTCATCTGGCTGCCACCCAGGGGGCAGGACACTGAGGACTTC +
Preference number: 5 (lower is better)
Translates to: GDPGGRYQEEWPWDH*FIWLPPRGQDTEDF
Trigger: GAAGTCCTCAGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCTTCCACCCGGGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS CCA 90 bp AGCCAGGAAGGTGACCCGGGTGGAAGGTACCAGGAGGAATGGCCTTaGGACCACTGGTTCATCTGGCTGCCACCCAGGGGGCAGGACACT +
Preference number: 5 (lower is better)
Translates to: SQEGDPGGRYQEEWP*DHWFIWLPPRGQDT
Trigger: AGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCTTCCACCCGGGTCACCTTCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS CCA 90 bp GTAGCCCTCTCGAAGCCGTACGGACACAGTGCTGACCAAGTCGGCTaGCACCTCCTTCTCAGTGTGCTTCTTCCGGCGCAAGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: VALSKPYGHSADQVG*HLLLSVLLPAQGQG
Trigger: GCCCTGGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTACGGCTTCGAGAGGGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 90 bp ATCCAGAGTCACACTGAGGTCCCTCAAGGGAACTCGGCCTCCAACTaGGGGGCCCTCCAGACTGGAAAGCACCTGGCCCAGGCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: IQSHTEVPQGNSASN*GALQTGKHLAQAGR
Trigger: CCTACCTGCCTGGGCCAGGTGCTTTCCAGTCTGGAGGGCCCCCCAGTTGGAGGCCGAGTTCCCTTGAGGGACCTCAGTGTGACTCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGGGGTGTGCAAGTGCTaGGGGATTGGTGTGTCATGC +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAGVCKC*GIGVSC
Trigger: GCATGACACACCAATCCCCAAGCACTTGCACACCCC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGTACCTGATGAGCAGTTaGTCCAGTGGCTTATGCAGG +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPYLMSS*SSGLCR
Trigger: CCTGCATAAGCCACTGGACAAACTGCTCATCAGGTA...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAGCTCCAGAACCATGTaGATGATTCCTTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSSRTM*MIPSPL
Trigger: CAGTGGGGAAGGAATCATCAACATGGTTCTGGAGCT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACCTGCATGCCAACCATTaGTTCCCTCAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHLHANH*FPQRFQ
Trigger: CTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAG...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TCGGCACCTGGAACGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCCAAGGTCTCCCCTGGTaGCTCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SAPGTWQVRRSTSLKKAAQGLPW*LRLVLN
Trigger: GTTCAAGACCAGCCTGAGCAACCAGGGGAGACCTTG...GGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACGTTCCAGGTGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTATGCAGGCAACCCCTTaGCCCCCAGTGCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSMQATP*PPVPCP
Trigger: TGGACAGGGCACTGGGGGCAAAGGGGTTGCCTGCAT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACATCAGGTCCCGCACCTaGTCACACTCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHIRSRT*SHSSVN
Trigger: GTTCACAGAGGAGTGTGACAAGGTGCGGGACCTGAT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCCGCTCAGCCTCTCCTaGCTCCTCAAAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSPLSLS*LLKGCS
Trigger: GCTGCACCCTTTGAGGAGCAAGGAGAGGCTGAGCGG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGCTCTAGGGGGTGTTaGCCACCCTGTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKASSRGC*PPCVNS
Trigger: GGAGTTCACACAGGGTGGCAAACACCCCCTAGAGCT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAAGGCAGAGCTGGGATaGGAACCCAGGTGTCATCTC +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRKAELG*EPRCHL
Trigger: GAGATGACACCTGGGTTCCAATCCCAGCTCTGCCTT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCGCCCGAGTAGAGGGCTTGAGTaGGCTACGTTCATACTGGGA +
Preference number: 5 (lower is better)
Translates to: RTVLVRSQGQQGEPRPRPSRGLE*ATFILG
Trigger: TCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACT...CGGGCGGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCAATTGGGACCCTCCTTaGGCCAGTGTGACCTCTCGG +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPNWDPP*ASVTSR
Trigger: CCGAGAGGTCACACTGGCCAAAGGAGGGTCCCAATT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGACTCAGTGGCAGAGTTaGGCGAAGGCAGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKTQWQS*AKAGGA
Trigger: CGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGGGAGAGGGGCCCAGTaGCCCAGGGGAACAAGGGCC +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSGRGAQ*PRGTRA
Trigger: GGCCCTTGTTCCCCTGGGCAACTGGGCCCCTCTCCC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTGGCAGCCTGCTGTGTaGGTCTCCTCCACTGCAAGA +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPWQPAV*VSSTAR
Trigger: TCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCCA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCGAAGAGCATGGCTGTaGCACAGTAATGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRRRAWL*HSNAPG
Trigger: GCCTGGTGCATTACTGTGCAACAGCCATGCTCTTCG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGTGCGCGTCCCATCATaGCAACCGGGCCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLVRVPS*QPGPRA
Trigger: TGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCAC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp ACGGACACAGTGCTGACCAAGTCGGCTGGCACCTCCTTCTCAGTGTaGTTCTTCCGGCGCAAGGCCAGGGCAGGGTTGCTGCTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: TDTVLTKSAGTSFSV*FFRRKARAGLLLAE
Trigger: CTCTGCAAGCAGCAACCCTGCCCTGGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 90 bp TGGCTGAGTAGGCAGAAGATGAGATGGGCTCGTGCATTCTGCCACTaGACCAGGCGAACCAGCGCTCGGCCCAATGCTGCCCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: WLSRQKMRWARAFCH*TRRTSARPNAAPRS
Trigger: AGACCTGGGGGCAGCATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCTACTCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp AGCTTCTGGCTGAGTAGGCAGAAGATGAGATGGGCTCGTGCATTCTaGCACTGCACCAGGCGAACCAGCGCTCGGCCCAATGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: SFWLSRQKMRWARAF*HCTRRTSARPNAAP
Trigger: GGGGGCAGCATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCTACTCAGCCAGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp GTGCCATGCCGACACCAGGGCATACTCGTTGTGTTCTGGGCCCCCTaGCCGGGCCATTCGCAATGGCTTCATGTGGTAAGAGCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: VPCRHQGILVVFWAP*PGHSQWLHVVRAGV
Trigger: CACGCCAGCTCTTACCACATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGTGTCGGCATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp AGAGTTTGGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATGGATATaGGCAGCTGCGCGGTGCAGGGCAGGACTCTGTGGGATGCCCCCT +
Preference number: 5 (lower is better)
Translates to: RVWRRQVERPGELWI*AAARCRAGLCGMPP
Trigger: AGGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS-3UTR CAA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGAGGGTGTTCCACTCTaGACCCCTGACCTCGCTACC +
Preference number: 5 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLREGVPL*TPDLAT
Trigger: GGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGAGGGTGTTCCACTCTaGACCCCTGACCTCGCTACC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSEGVPL*TPDLAT
Trigger: GGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGATCTGGTCTGTCTGGTaGATGCTCTGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGIWSVW*MLCSVF
Trigger: GAACACGCTGCAGAGCATCAACCAGACAGACCAGAT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGACCATGCATGGGGCCTaGGAAATGATACGGACCATG +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRTMHGA*EMIRTM
Trigger: CATGGTCCGTATCATTTCCAAGGCCCCATGCATGGT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGGGAGAGCTAGTGCTCTaGGGGCTCCCATCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKGELVL*GLPSVL
Trigger: CAAGACTGATGGGAGCCCCAAGAGCACTAGCTCTCC...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCACTGCTTTCAGATGTaGACCGGTGGTGCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAHCFQM*TGGAEG
Trigger: ACCCTCAGCACCACCGGTCAACATCTGAAAGCAGTG...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACGATGACCTGGGTCAGTaGCTCAAATTCCTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHDDLGQ*LKFLLS
Trigger: CGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATC...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTCGGGCTTCGAGGCCGTCGAGGTGGCCTGGCCGTACGCGGAGACGCCTGAGGGGACAATGTCATCAGTaGTTTTGGGGGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: ARASRPSRWPGRTRRRLRGQCHQ*FWGNPN
Trigger: ATTTGGGTTCCCCCAAAACAACTGATGACATTGTCC...CCTCAGGCGTCTCCGCGTACGGCCAGGCCACCTCGACGGCCTCGAAGCCCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CATGGACAGCACTGGCTTCCAGTAGGCAGCAAACTGGGCATGGGATaGGTCAGAACCACTGGGCTGGAGGGAGAGCACCGGGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: HGQHWLPVGSKLGMG*VRTTGLEGEHRGGG
Trigger: TCCACCACCCCGGTGCTCTCCCTCCAGCCCAGTGGTTCTGACTCATCCCATGCCCAGTTTGCTGCCTACTGGAAGCCAGTGCTGTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CCTCTCGGACACTGTAGCCCTCTCGAAGCCGTACGGACACAGTGCTaGCCAAGTCGGCTGGCACCTCCTTCTCAGTGTGCTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: PLGHCSPLEAVRTQC*PSRLAPPSQCASSG
Trigger: GCCGGAAGAAGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTACGGCTTCGAGAGGGCTACAGTGTCCGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 90 bp GGGTGGAGAGCTTGCGGGATCTCAGAATACGTCAGGTCCTGGAGGTaGTTCCAGATTCCAGGGCCAGGTCCCACTCGCCCATACTGTGGC +
Preference number: 5 (lower is better)
Translates to: GWRACGISEYVRSWR*FQIPGPGPTRPYCG
Trigger: GCCACAGTATGGGCGAGTGGGACCTGGCCCTGGAATCTGGAAGCACCTCCAGGACCTGACGTATTCTGAGATCCCGCAAGCTCTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp GAGCGAGGGAAGGGGGCAGCGCATCCCCTTTCCATGGCCGGTCACTaGAGGATGTCTCTAGGAGCCTGGGAAAGAGCAGCATGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: ERGKGAAHPLSMAGH*RMSLGAWERAACLW
Trigger: CCAAAGACATGCTGCTCTTTCCCAGGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGAAAGGGGATGCGCTGCCCCCTTCCCTCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp TGGGTCTGGCTGTCTCCACTCAGTGCTCCTCCTGCTTACCTGGAATaGCAGTTCCATGAGGATGATGCCCCCAGGCAGTGCCCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WVWLSPLSAPPAYLE*QFHEDDAPRQCPLQ
Trigger: CTGCAGCGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAGGTAAGCAGGAGGAGCACTGAGTGGAGACAGCCAGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp AGGAAGCAGTCCAGCTGGGGGTCGATGTCCCCAATGGATTTGGCATaGACTGCTTCTAGGAGTTCCTCCAGCTCTGCCAGGGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RKQSSWGSMSPMDLA*TASRSSSSSARARR
Trigger: GCGCCTGGCCCTGGCAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp GCCCAGGCCGCTGAAGAAGGCTCCCCATGGGACCCACCTGGCTGTTaGCCAGCTGCCACAAAGAAGAAGCCACTGTCAGGGTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: AQAAEEGSPWDPPGC*PAATKKKPLSGSSR
Trigger: TCTTGAAGACCCTGACAGTGGCTTCTTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTCCCATGGGGAGCCTTCTTCAGCGGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp ACAGGTGGGTCTGGCTGTCTCCACTCAGTGCTCCTCCTGCTTACCTaGAATGCCAGTTCCATGAGGATGATGCCCCCAGGCAGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: TGGSGCLHSVLLLLT*NASSMRMMPPGSAR
Trigger: GCGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAGGTAAGCAGGAGGAGCACTGAGTGGAGACAGCCAGACCCACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp GCCAGCCCGCCTACTGCATTACTCTACTGCCCAGCAAATGGGACATaGAGCCATGCTGCCCACAGCACACTGGGGTGCACTGACTGTGCC +
Preference number: 5 (lower is better)
Translates to: ASPPTALLYCPANGT*SHAAHSTLGCTDCA
Trigger: GGCACAGTCAGTGCACCCCAGTGTGCTGTGGGCAGCATGGCTCCATGTCCCATTTGCTGGGCAGTAGAGTAATGCAGTAGGCGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp GCTGCAAGCTGCGGAATAGCCCACGGACATAGCACCGCTGTGCATGCTCCTGCAAAGCCTGACACAATCTaGTGCCGGGCCGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: AASCGIAHGHSTAVHAPAKPDTI*CRAGAG
Trigger: ACCAGCACCGGCCCGGCACAAGATTGTGTCAGGCTT...TGCAGGAGCATGCACAGCGGTGCTATGTCCGTGGGCTATTCCGCAGCTTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTTGGGCGTTGGCTCCTaGCTTTGTACCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLLGVGS*LCTRWG
Trigger: CCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGTACCTGATGAGCAGTTaGTCCAGTGGCTTATGCAGG +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRYLMSS*SSGLCR
Trigger: CCTGCATAAGCCACTGGACAAACTGCTCATCAGGTA...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGTGGCAGGTCCGCCGCAGCACCTCACTCAAGAAGGCAGCCTGGTCAACGGGGGAGCTCCAGAACCATGTaGATGATTCCTTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RGRSAAAPHSRRQPGQRGSSRTM*MIPSPL
Trigger: CAGTGGGGAAGGAATCATCAACATGGTTCTGGAGCT...CCCCCGTTGACCAGGCTGCCTTCTTGAGTGAGGTGCTGCGGCGGACCTGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGCTGCATGCCAACCATTaGTTCCCTCAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GAPEGAACQPFVPSALPVLHANH*FPQRFQ
Trigger: CTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAG...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGGGGCTGTTTTCTCCTaGTGGGCTGAGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEGAVFS*WAEVPR
Trigger: CCTCGGCACCTCAGCCCACAAGGAGAAAACAGCCCC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGAGGGAAGGAAAGGTTTaGGAAAGTACTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRREGKV*ESTGGR
Trigger: CCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCCT...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGTTAGCAGGTTACAGGTaGCGGAGAAGGACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKLAGYR*RRRTEG
Trigger: TCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTCCATCGTCACTTCCACCCGTGTTACTCGAGGGCCCTCAGGCTCCAGGGGCCAGCTTTACCTCCAATaGGGACCCTCCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PSIVTSTRVTRGPSGSRGQLYLQ*GPSFGQ
Trigger: CTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCTG...GCCCCTGGAGCCTGAGGGCCCTCGAGTAACACGGGTGGAAGTGACGATGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAGAAGCAGTCGCTGGTaGACCTCCCTGCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSRSSRW*TSLQIS
Trigger: GGAGATCTGCAGGGAGGTCAACCAGCGACTGCTTCT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCGCAGCAGGAATGGGTTaGGCTCCTTTTCATCTCGCA +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKAAAGMG*APFHLA
Trigger: TGCGAGATGAAAAGGAGCCAAACCCATTCCTGCTGC...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGTGCGCGTCCCATCATaGCAACCGGGCCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSVRVPS*QPGPRA
Trigger: TGCCCGAGGGCCCGGTTGCAATGATGGGACGCGCAC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCACAGCACCATGTCGTaGGCAGGACAGGACCCCTCG +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEHSTMS*AGQDPS
Trigger: CGAGGGGTCCTGTCCTGCCAACGACATGGTGCTGTG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS TCA 90 bp AGAGTGAAGGCTGTGGAGGTGCTGGCCCAGGTGGAGTCCGCAATGTaGAGGGGGCCTTCTCACCAAGGGTGTCATTGGGACCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: RVKAVEVLAQVESAM*RGPSHQGCHWDPHC
Trigger: ACAGTGAGGGTCCCAATGACACCCTTGGTGAGAAGGCCCCCTTCACATTGCGGACTCCACCTGGGCCAGCACCTCCACAGCCTTCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp CACCCCGCCTGCACCCTGAGGTCACATAGGACCGTGTCTCCAAATTaGGCCTCAGTCCTCATCCTCGCTGGCTTGCTGGTCAGCCTGTCT +
Preference number: 5 (lower is better)
Translates to: HPACTLRSHRTVSPN*ASVLILAGLLVSLS
Trigger: AGACAGGCTGACCAGCAAGCCAGCGAGGATGAGGACTGAGGCTCAATTTGGAGACACGGTCCTATGTGACCTCAGGGTGCAGGCGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp CTTCCCTCAAGCCTGACACAATCTTGTGCCGGGCCGGTGCTGGTGTaGCAATGGGAAAACCCAGGCGAAGAACCATGCATGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LPSSLTQSCAGPVLV*QWENPGEEPCMGPW
Trigger: CCAAGGCCCCATGCATGGTTCTTCGCCTGGGTTTTCCCATTGGCACACCAGCACCGGCCCGGCACAAGATTGTGTCAGGCTTGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp ACAGCCCTGGAATGCCAGTTCCATGAGGATGATGCCCCCAGGCAGTaGCCGCTGCAGGTGGTAGGTGGTTACCGGAGAGCTAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: TALECQFHEDDAPRQ*PLQVVGGYRRASAL
Trigger: AAGAGCACTAGCTCTCCGGTAACCACCTACCACCTGCAGCGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp TGCGCGGTGCAGGGCAGGACTCTGTGGGATGCCCCCTCTTCGGAGTaGCCCCACCATCTCATCTTCCAACAACCAGCGGATCTCATTCAT +
Preference number: 5 (lower is better)
Translates to: CAVQGRTLWDAPSSE*PHHLIFQQPADLIH
Trigger: ATGAATGAGATCCGCTGGTTGTTGGAAGATGAGATGGTGGGGGCACTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 90 bp CACTGGGCAGTGGTGCCCGCTGACGGGAGTGGAAGGGAGTCTCACTaGGCCACAGATCTTCTTCACTCTCGGCCACCAGAAGAGAGTTAC +
Preference number: 5 (lower is better)
Translates to: HWAVVPADGSGRESH*ATDLLHSRPPEESY
Trigger: GTAACTCTCTTCTGGTGGCCGAGAGTGAAGAAGATCTGTGGCGCAGTGAGACTCCCTTCCACTCCCGTCAGCGGGCACCACTGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp CCACCCGCAGGAGCACCTGCCTCCATTCACAACCGCCGACACTACTaGAGCCTCATCCTAACTGACCTTGGCTTCTCTGGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: PPAGAPASIHNRRHY*SLILTDLGFSGRPF
Trigger: GAAGGGTCTCCCAGAGAAGCCAAGGTCAGTTAGGATGAGGCTGCAGTAGTGTCGGCGGTTGTGAATGGAGGCAGGTGCTCCTGCGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp GGTGGAAGGTACCAGGAGGAATGGCCTTGGGACCACTGGTTCATCTaGCTGCCACCCAGGGGGCAGGACACTGAGGACTTCCAATTCCTG +
Preference number: 5 (lower is better)
Translates to: GGRYQEEWPWDHWFI*LPPRGQDTEDFQFL
Trigger: CAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCTTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS CCA 90 bp GCCAGAACTGTGCCATGCCGACACCAGGGCATACTCGTTGTGTTCTaGGCCCCCTGGCCGGGCCATTCGCAATGGCTTCATGTGGTAAGA +
Preference number: 5 (lower is better)
Translates to: ARTVPCRHQGILVVF*APWPGHSQWLHVVR
Trigger: TCTTACCACATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGTGTCGGCATGGCACAGTTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp AAGAGGCAGAGCTGCTCATATATCTGCTGCAGGAACACCTCCCGCTaGGAAGGGTCCAAGAGGCAGCCCTGTACCAGCACCTGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: KRQSCSYICCRNTSR*EGSKRQPCTSTWWD
Trigger: GTCCCACCAGGTGCTGGTACAGGGCTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCTCTGCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 90 bp AGCTCTCGCTGGCTGGTGAGCACCACGAAGAACTGTAGCCTGGGGTaGGGAGCAGGGCAGGAGAGTGGTGGTTGTAGCAAGAGACACACA +
Preference number: 5 (lower is better)
Translates to: SSRWLVSTTKNCSLG*GAGQESGGCSKRHT
Trigger: TGTGTGTCTCTTGCTACAACCACCACTCTCCTGCCCTGCTCCCCACCCCAGGCTACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640484.1
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGATCTGGTCTGTCTGGTaGATGCTCTGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKIWSVW*MLCSVF
Trigger: GAACACGCTGCAGAGCATCAACCAGACAGACCAGAT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TCTGGGAAGCCTGACGCCCAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACCGTTGGCTCCTTGCTTaGTACCCGGTGGGGGAAACG +
Preference number: 5 (lower is better)
Translates to: SGKPDAQRKPVSLDGMVDRWLLA*YPVGET
Trigger: CGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACG...GTCCACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAGGCTTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTGTTTCACCTTGGGCGTaGGCTCCTTGCTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSVSPWA*APCFVP
Trigger: GGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAAC...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGTCGAGAAGCTGTCTTaGGTGGAGGTAGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRVEKLS*VEVECG
Trigger: CCCACACTCTACCTCCACCAAAGACAGCTTCTCGAC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTACCTCAGTGACCAGATaGAGCTCTGAGTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSTSVTR*SSESPS
Trigger: GGAGGGAGACTCAGAGCTCAATCTGGTCACTGAGGT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TCTGGGAAGCCTGACGCCCAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACGGGGGTTCACAAGCCTaGCATAGCAGCGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: SGKPDAQRKPVSLDGMVDGGSQA*HSSATE
Trigger: CTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCCC...GTCCACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAGGCTTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCATGTCCCCAATGGATTaGGCATGGACTGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPMSPMD*AWTASR
Trigger: CCTAGAAGCAGTCCATGCCAAATCCATTGGGGACAT...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGTGGCTGTGGGTGTTaGGGGAGGGCGGTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHSGCGC*GRAVPA
Trigger: AGCAGGAACCGCCCTCCCCAAACACCCACAGCCACT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGCTGCTTCCCTCCCATaGAGAAGCCAGTGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLAASLP*RSQCQG
Trigger: ACCCTGGCACTGGCTTCTCAATGGGAGGGAAGCAGC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTCATGCAGCTGGGGTTTaGGCTCAGGTGAGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSHAAGV*AQVRKV
Trigger: CACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATG...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGGACCCACCTGGCTGTaGGCCAGCTGCCACAAAGAA +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEGPTWL*ASCHKE
Trigger: TTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTCC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAA +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHSTQPL*LAPGKQ
Trigger: TTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACT...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTTGTTGTCCGGCGCTTTaGTCTCTGGGCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSCCPAL*SLGSRI
Trigger: GATTCTGGAGCCCAGAGACAAAAGCGCCGGACAACA...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCCCAAGGATTCACAGCTaGTGGGGGCCTCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSPRIHS*WGPLGS
Trigger: GGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGG...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAGGAGTGGGCATTGCTaGATGGGCAGGAAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKRSGHC*MGRKLS
Trigger: ACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGTCCCAGGCTTATGCCACTCTGTTaGCCACTCTTTCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: REGLEQAVRYAKALGCPRLMPLC*PLFHAH
Trigger: GTGAGCATGAAAGAGTGGCAAACAGAGTGGCATAAG...CCTGGGACAGCCCAGGGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CATCATAACCTAGGTGGTCTGAGTCCACACTGCCCTGACTGGACATaGGACTTAATCCCCGGCTGGGCCCAGGCTGACTCCCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: HHNLGGLSPHCPDWT*DLIPGWAQADSLPV
Trigger: CACAGGGAGGGAGTCAGCCTGGGCCCAGCCGGGGATTAAGTCTCATGTCCAGTCAGGGCAGTGTGGACTCAGACCACCTAGGTTATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638769.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp GTGTGTCCTCTGTACATAGTGAAGCTGGCAGCAGCTGAAGCTCGATaGTGGCATCGGCCAGGGCCTGGCGAGCTGCTCCTCGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: VCPLYIVKLAAAEAR*WHRPGPGELLLGVS
Trigger: AGAAACTCCGAGGAGCAGCTCGCCAGGCCCTGGCCGATGCCATCATCGAGCTTCAGCTGCTGCCAGCTTCACTATGTACAGAGGACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp TCAGAGAGATCTCTGGCCCAGGGTCTGGAATGCCAGGGACACGGGTaGTCTGAAACTCAGGCTCGCTTAGGTCCTCGGTCTCTATGCTGG +
Preference number: 5 (lower is better)
Translates to: SERSLAQGLECQGHG*SETQARLGPRSLCW
Trigger: CCAGCATAGAGACCGAGGACCTAAGCGAGCCTGAGTTTCAGAGCACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAGATCTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp GCTGGCAGACATCTGTCAGAGAGATCTCTGGCCCAGGGTCTGGAATaGCAGGGACACGGGTGCTCTGAAACTCAGGCTCGCTTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: AGRHLSERSLAQGLE*QGHGCSETQARLGP
Trigger: AGGACCTAAGCGAGCCTGAGTTTCAGAGCACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAGATCTCTCTGACAGATGTCTGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp CAGCAGCTGAAGCTCGATGATGGCATCGGCCAGGGCCTGGCGAGCTaGTCCTCGGAGTTTCTCCTCCAGCTGCACAATACTAATGTTCCC +
Preference number: 5 (lower is better)
Translates to: QQLKLDDGIGQGLAS*SSEFLLQLHNTNVP
Trigger: GGGAACATTAGTATTGTGCAGCTGGAGGAGAAACTCCGAGGAGCAGCTCGCCAGGCCCTGGCCGATGCCATCATCGAGCTTCAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp CTGGGTGAGGGGGAGCAGGGATTAGAAATGGGACACACCACCCTCTaGCCTCCACAGACTTCTCACCTGGGAACTGGCCTACTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LGEGEQGLEMGHTTL*PPQTSHLGTGLLVL
Trigger: GAGGACAAGTAGGCCAGTTCCCAGGTGAGAAGTCTGTGGAGGGCAGAGGGTGGTGTGTCCCATTTCTAATCCCTGCTCCCCCTCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp GCTTACCTGGAATGCCAGTTCCATGAGGATGATGCCCCCAGGCAGTaGCCGCTGCAGGTGGTAGGTGGTTACCGGAGAGCTAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: AYLECQFHEDDAPRQ*PLQVVGGYRRASAL
Trigger: AAGAGCACTAGCTCTCCGGTAACCACCTACCACCTGCAGCGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAGGTAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp ACCTGCAGATCCCGAGTCAACAGTCTGAAATGTGGCCGGAGAGCCTaGATTTCAGCAAGCTCCCAGGTGCTGCGGCTGCTGGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: TCRSRVNSLKCGRRA*ISASSQVLRLLVCG
Trigger: TCCACAGACCAGCAGCCGCAGCACCTGGGAGCTTGCTGAAATGCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp TGGGAGCATGAGGGTGCAGGCCCTGGCTTCTACTTACCGTGCATGTaGATACACTTCCACACGGTCCTGCAGGACCCGGACAATGAGCCA +
Preference number: 5 (lower is better)
Translates to: WEHEGAGPGFYLPCM*IHFHTVLQDPDNEP
Trigger: TGGCTCATTGTCCGGGTCCTGCAGGACCGTGTGGAAGTGTATGCACATGCACGGTAAGTAGAAGCCAGGGCCTGCACCCTCATGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp GCCTGCCCAACACCATGGACCAGCAGCTGGATATGTCTGTCCACTTaGCCCACAGGACGAGCAGCATCTGAACTGCGGCTAGAGACCATG +
Preference number: 5 (lower is better)
Translates to: ACPTPWTSSWICLST*PTGRAASELRLETM
Trigger: CATGGTCTCTAGCCGCAGTTCAGATGCTGCTCGTCCTGTGGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470897.2
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp AGGGAGGAAACAGACCCACAAAGCTGCCACTGTGAGTGGCAAGGCTaGGCTTGGAGTCCAGGTCTAGACTGCAAGGCTGGGCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: REETDPQSCHCEWQG*AWSPGLDCKAGLSP
Trigger: TGGAGAGAGCCCAGCCTTGCAGTCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGTTTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS CCA 90 bp CGACAGCTCTGGGGGAAGCGGCTTAGGAGAACTTTGATCAGGCTCTaGTACCAGGAGACCGTCATGGATAGGAAGCAGTCCAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RQLWGKRLRRTLIRL*YQETVMDRKQSSWG
Trigger: CCCCCAGCTGGACTGCTTCCTATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCAGAGCTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp CCCACACAACGTCACAGGAGAAATGGCCAGGGACAAACTGCATTGTaGCTGCCAGGTACCCACGGGGCGCACAGCTCTCATCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PTQRHRRNGQGQTAL*LPGTHGAHSSHQQH
Trigger: ATGCTGCTGATGAGAGCTGTGCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTGGCCATTTCTCCTGTGACGTTGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAGAGTAGATGGGCTCTaGGCTTCGGGACAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERVDGL*ASGQSE
Trigger: CTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAAGTGGCACTCCGCTCTaGGTGCTGTCAGGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQSGTPL*VLSGSV
Trigger: CACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCAAGCCTGACACAATCTaGTGCCGGGCCGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSKPDTI*CRAGAG
Trigger: ACCAGCACCGGCCCGGCACAAGATTGTGTCAGGCTT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGGGCGCCTGAGGGGGCTGCATGCCAACCATTTGTTCCCTCAGCGCTTCCAGTGTACCTGATGAGCAGTTaGTCCAGTGGCTTATGCAGG +
Preference number: 5 (lower is better)
Translates to: GAPEGAACQPFVPSALPVYLMSS*SSGLCR
Trigger: CCTGCATAAGCCACTGGACAAACTGCTCATCAGGTA...CACTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAGCCCCCTCAGGCGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTGGTGCTGCCGACTGCTaGCTCCTTCGGGATCCCATG +
Preference number: 5 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAGAADC*LLRDPM
Trigger: CATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACC...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp TCTGGGAAGCCTGACGCCCAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACTGGTTAGCTGCCTCCTaGTACCGGGGTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: SGKPDAQRKPVSLDGMVDWLAAS*YRGSIQ
Trigger: CTGGATGGAACCCCGGTACAAGGAGGCAGCTAACCA...GTCCACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAGGCTTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTCCGCTCAGCCTCTCCTaGCTCCTCAAAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAPLSLS*LLKGCS
Trigger: GCTGCACCCTTTGAGGAGCAAGGAGAGGCTGAGCGG...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGGGGCTGTTTTCTCCTaGTGGGCTGAGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGGAVFS*WAEVPR
Trigger: CCTCGGCACCTCAGCCCACAAGGAGAAAACAGCCCC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAGTGTCCGAGCCGGGGGCTGAGGCCCGTTCTCTCTGCAGGAGACCAAGAGAAGAGGGAAGGAAAGGTTTaGGAAAGTACTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ECPSRGLRPVLSAGDQEKREGKV*ESTGGR
Trigger: CCTGCCTCCAGTACTTTCCAAAACCTTTCCTTCCCT...CTTCTCTTGGTCTCCTGCAGAGAGAACGGGCCTCAGCCCCCGGCTCGGACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCACTCAGTGGCAGAGTTaGGCGAAGGCAGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSTQWQS*AKAGGA
Trigger: CGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCGGCGGAACTCCTCCTaGAATTGTGTGAGGGAACGC +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPERRNSS*NCVRER
Trigger: GCGTTCCCTCACACAATTCAAGGAGGAGTTCCGCCG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGACAGGCGGCCTTCCGAGAGGGACTGGAGCAGGCCGTGCGGTATGCCAAAGCCAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAA +
Preference number: 5 (lower is better)
Translates to: RQAAFREGLEQAVRYAKASTQPL*LAPGKQ
Trigger: TTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACT...GGCTTTGGCATACCGCACGGCCTGCTCCAGTCCCTCTCGGAAGGCCGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGGGAGAGGGGCCCAGTaGCCCAGGGGAACAAGGGCC +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAGRGAQ*PRGTRA
Trigger: GGCCCTTGTTCCCCTGGGCAACTGGGCCCCTCTCCC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGGAAGTTGAGTGTTCCTaGCAAGGGTGCTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLREVECS*QGCCGK
Trigger: CTTGCCACAGCACCCTTGCAAGGAACACTCAACTTC...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGGCAGCCAGCTCTCTCTaGCTTCGCGTCCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGAASSL*LRVRLS
Trigger: TGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGC...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CACCTAGCACGTGCTGATGCACGAGGCGCAGATGGAAGTCATAGCTaGACGAGTGCACGTGCATCAGGTCCCGCACCTTGTCACACTCCT +
Preference number: 5 (lower is better)
Translates to: HLARADARGADGSHS*TSARASGPAPCHTP
Trigger: AGGAGTGTGACAAGGTGCGGGACCTGATGCACGTGCACTCGTTCAGCTATGACTTCCATCTGCGCCTCGTGCATCAGCACGTGCTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp TGGGTCGAAGAGCATGGCTGTTGCACAGTAATGCACCAGGCGGGATaGCTGCTTCAGGGTCTCCAGCTCTCCAGCACTGATGGGCATGGT +
Preference number: 5 (lower is better)
Translates to: WVEEHGCCTVMHQAG*LLQGLQLSSTDGHG
Trigger: ACCATGCCCATCAGTGCTGGAGAGCTGGAGACCCTGAAGCAGTCATCCCGCCTGGTGCATTACTGTGCAACAGCCATGCTCTTCGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp ACACTGGGGTGCACTGACTGTGCCCGCAGCTCATTCACATACCTGTaGGTTGACAGCCTGCCCCATTGGGATTCGGGAACATTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TLGCTDCARSSFTYL*VDSLPHWDSGTFQG
Trigger: GCCCTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGGCACAGTCAGTGCACCCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 90 bp AGGAGAGGCCTACTTCCATCTCCACACCTCACCCCGCCTGCACCCTaGGGTCACATAGGACCGTGTCTCCAAATTGAGCCTCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RRGLLPSPHLTPPAP*GHIGPCLQIEPQSS
Trigger: TGAGGACTGAGGCTCAATTTGGAGACACGGTCCTATGTGACCTCAGGGTGCAGGCGGGGTGAGGTGTGGAGATGGAAGTAGGCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp GAAGGTACCAGGAGGAATGGCCTTGGGACCACTGGTTCATCTGGCTaGCACCCAGGGGGCAGGACACTGAGGACTTCCAATTCCTGTTCA +
Preference number: 5 (lower is better)
Translates to: EGTRRNGLGTTGSSG*HPGGRTLRTSNSCS
Trigger: TGAACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTGGTACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS GCA 90 bp GTGGCCACCTTATCCTCAAAGAGGCAGAGCTGCTCATATATCTGCTaGAGGAACACCTCCCGCTGGGAAGGGTCCAAGAGGCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VATLSSKRQSCSYIC*RNTSRWEGSKRQPC
Trigger: ACAGGGCTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 90 bp ATGGTGGCCACCTTATCCTCAAAGAGGCAGAGCTGCTCATATATCTaGTGCAGGAACACCTCCCGCTGGGAAGGGTCCAAGAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: MVATLSSKRQSCSYI*CRNTSRWEGSKRQP
Trigger: GGGCTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 90 bp AAGCGCTGCATGGCTTTGGCAGCCTGCTGTGTTGGTCTCCTCCACTaGAAGAAGTTCCTTCCCAGAAGCAGCAGATGCCGCTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KRCMALAACCVGLLH*KKFLPRSSRCRSAA
Trigger: TGCAGCTGAGCGGCATCTGCTGCTTCTGGGAAGGAACTTCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp CTGCCACAGACTCTAGATGACTACAGGCCAGACCAGGCACTGTGCTaGCTCAGGGCTACAGCTGAACACGCTTTGGATGACCGATGGGGT +
Preference number: 5 (lower is better)
Translates to: LPQTLDDYRPDQALC*LRATAEHALDDRWG
Trigger: ACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGTCTGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp GGTCTGCCACAGACTCTAGATGACTACAGGCCAGACCAGGCACTGTaGTGCCTCAGGGCTACAGCTGAACACGCTTTGGATGACCGATGG +
Preference number: 5 (lower is better)
Translates to: GLPQTLDDYRPDQAL*CLRATAEHALDDRW
Trigger: CCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGTCTGTGGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp CTCAGCTCTGGCTGGGCCCATCTCTGTGGGCTCCTTAATGCCCTGTaGTCGTGTCCACCACCACAGTTCTCTCTACCTGTCCTTTACAGC +
Preference number: 5 (lower is better)
Translates to: LSSGWAHLCGLLNAL*SCPPPQFSLPVLYS
Trigger: GCTGTAAAGGACAGGTAGAGAGAACTGTGGTGGTGGACACGAGCACAGGGCATTAAGGAGCCCACAGAGATGGGCCCAGCCAGAGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp CCTTTTCGTTTCACCTTGGGCGTTGGCTCCTTGCTTTGTACCCGGTaGGGGAAACGCAGCCGCAGGATCTCTTCCCTCAAGCCTGACACA +
Preference number: 5 (lower is better)
Translates to: PFRFTLGVGSLLCTR*GKRSRRISSLKPDT
Trigger: TGTGTCAGGCTTGAGGGAAGAGATCCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp GGCATACTCGTTGTGTTCTGGGCCCCCTGGCCGGGCCATTCGCAATaGCTTCATGTGGTAAGAGCTGGCGTGATCAGCCACGTAGTTGTA +
Preference number: 5 (lower is better)
Translates to: GILVVFWAPWPGHSQ*LHVVRAGVISHVVV
Trigger: TACAACTACGTGGCTGATCACGCCAGCTCTTACCACATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp TGGATAGGAAGCAGTCCAGCTGGGGGTCGATGTCCCCAATGGATTTaGCATGGACTGCTTCTAGGAGTTCCTCCAGCTCTGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: WIGSSPAGGRCPQWI*HGLLLGVPPALPGP
Trigger: TGGCCCTGGCAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTTCCTATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp GAATGGACTCGGATCACAGTTCCCCACACAACGTCACAGGAGAAATaGCCAGGGACAAACTGCATTGTGGCTGCCAGGTACCCACGGGGC +
Preference number: 5 (lower is better)
Translates to: EWTRITVPHTTSQEK*PGTNCIVAARYPRG
Trigger: GCCCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTGGCCATTTCTCCTGTGACGTTGTGTGGGGAACTGTGATCCGAGTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp TCCGTGATCTCAGGACCTGCCTGCCCAACACCATGGACCAGCAGCTaGATATGTCTGTCCACTTGGCCCACAGGACGAGCAGCATCTGAA +
Preference number: 5 (lower is better)
Translates to: SVISGPACPTPWTSS*ICLSTWPTGRAASE
Trigger: TTCAGATGCTGCTCGTCCTGTGGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGCAGGTCCTGAGATCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp CATCCCCTTTCCATGGCCGGTCACTGCAGGATGTCTCTAGGAGCCTaGGAAAGAGCAGCATGTCTTTGGACATGCCTCCTCCCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: HPLSMAGHCRMSLGA*ERAACLWTCLLPGH
Trigger: ATGGCCTGGGAGGAGGCATGTCCAAAGACATGCTGCTCTTTCCCAGGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGAAAGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp CCCTGGAGGGAAGGTGAAGATGAGATCAGGAAGGCGAGAGACAGGTaGGTCTGGCTGTCTCCACTCAGTGCTCCTCCTGCTTACCTGGAA +
Preference number: 5 (lower is better)
Translates to: PWREGEDEIRKARDR*VWLSPLSAPPAYLE
Trigger: TTCCAGGTAAGCAGGAGGAGCACTGAGTGGAGACAGCCAGACCCACCTGTCTCTCGCCTTCCTGATCTCATCTTCACCTTCCCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp CAGACCAGGCACTGTGCTGCCTCAGGGCTACAGCTGAACACGCTTTaGATGACCGATGGGGTCAGCCTTGTAGTGAGTGCAGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: QTRHCAASGLQLNTL*MTDGVSLVVSAVMA
Trigger: TGCCATGACTGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTAGTGGCACTCCGCTCTaGGTGCTGTCAGGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKASGTPL*VLSGSV
Trigger: CACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGGGGTGTGCAAGTGCTaGGGGATTGGTGTGTCATGC +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQGVCKC*GIGVSC
Trigger: GCATGACACACCAATCCCCAAGCACTTGCACACCCC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGTTTCACCTTGGGCGTaGGCTCCTTGCTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEVSPWA*APCFVP
Trigger: GGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAAC...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGACCTCGTGGGACTGCTGGAGCCCATCAACACCCGCATCACTGACCCCCAGTAGCTCCAGAACCATGTaGATGATTCCTTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RTSWDCWSPSTPASLTPSSSRTM*MIPSPL
Trigger: CAGTGGGGAAGGAATCATCAACATGGTTCTGGAGCT...ACTGGGGGTCAGTGATGCGGGTGTTGATGGGCTCCAGCAGTCCCACGAGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTAGGCTTTGTCTCCTCTaGAGGGGGTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QILQRPNRLRRNWQEGITRLCLL*RGSLQA
Trigger: GGCCTGGAGGGACCCCCTCAAGAGGAGACAAAGCCT...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTGGTGGGAGTGGATGTaGGAAGTGGTTCCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEWWEWM*EVVPAV
Trigger: AACAGCCGGAACCACTTCCAACATCCACTCCCACCA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTGGTGGGAGTGGATGTaGGAAGTGGTTCCGGCTGTT +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLWWEWM*EVVPAV
Trigger: AACAGCCGGAACCACTTCCAACATCCACTCCCACCA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGGAGAGCTAGTGCTCTaGGGGCTCCCATCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSGELVL*GLPSVL
Trigger: CAAGACTGATGGGAGCCCCAAGAGCACTAGCTCTCC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACATGGACAGCTGTGAGTaGACAGCCTGCCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHMDSCE*TACPIG
Trigger: CCCAATGGGGCAGGCTGTCAACTCACAGCTGTCCAT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAAGCTCTAGGGGGTGTTaGCCACCCTGTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQSSRGC*PPCVNS
Trigger: GGAGTTCACACAGGGTGGCAAACACCCCCTAGAGCT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATGGTAAGTGGAAGGGGGTACTTCGCAGATCGGAAGGAGGGCGGGGCCTGCGGAGTAGAGGGCTTGAGTaGGCTACGTTCATACTGGGA +
Preference number: 5 (lower is better)
Translates to: NGKWKGVLRRSEGGRGLRSRGLE*ATFILG
Trigger: TCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACT...CCGCAGGCCCCGCCCTCCTTCCGATCTGCGAAGTACCCCCTTCCACTTACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGACAGTCAGACCCAGGTaGCCTGGCTCCGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSTVRPR*PGSGSG
Trigger: TCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGT...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGGACCCACCTGGCTGTaGGCCAGCTGCCACAAAGAA +
Preference number: 5 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGGPTWL*ASCHKE
Trigger: TTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTCC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCGCAGCCAGCTCTCTCTaGCTTCGCGTCCGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIAASSL*LRVRLS
Trigger: TGAGAGCCGGACGCGAAGCAAGAGAGAGCTGGCTGC...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp GGTTCCGGCTGTTGCTATCTGTGTACTTGGGAGAGTGCAGGAAGATaGGCAAGTTCTGCCGTAGGTACCATGCCAGGGCTGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GSGCCYLCTWESAGR*ASSAVGTMPGLEAR
Trigger: CCTGGCTTCCAGCCCTGGCATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACACAGATAGCAACAGCCGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp CCTGGTAAACAAACATGTTTTTCCGGTTCACCACAGAGAAGGCATTaGGCACAGAGCGCAGGGCCTGGATGGCCCGAGAGACCCCCATGC +
Preference number: 5 (lower is better)
Translates to: PGKQTCFSGSPQRRH*AQSAGPGWPERPPC
Trigger: GCATGGGGGTCTCTCGGGCCATCCAGGCCCTGCGCTCTGTGCTCAATGCCTTCTCTGTGGTGAACCGGAAAAACATGTTTGTTTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp CCCCATTCTGAGCTGAAGAACTGTCCACAACAACCGGGCAGCGGATaGCCTGGGTCAGTTGCTCAAATTCCTCCTCTCGCAGTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: PHSELKNCPQQPGSG*PGSVAQIPPLAVGL
Trigger: CAGACCCACTGCGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTGTTGTGGACAGTTCTTCAGCTCAGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp AGTCCAAGGGGTCCTTTCTGGGGCTCCAGCCTACTGACAAAGTTCTaGCAGCTCCTTGGGTTGTCAGTTCCAGAGCCTGGCCCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SPRGPFWGSSLLTKF*QLLGLSVPEPGPQD
Trigger: ATCCTGAGGGCCAGGCTCTGGAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGTAGGCTGGAGCCCCAGAAAGGACCCCTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 90 bp ATCACCTGGGGAGACTGTCAACCTGCAGATCCCGAGTCAACAGTCTaGAATGTGGCCGGAGAGCCTGCATTTCAGCAAGCTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: ITWGDCQPADPESTV*NVAGEPAFQQAPRC
Trigger: GCACCTGGGAGCTTGCTGAAATGCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGTTGACAGTCTCCCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp CACCAAGGGCAGTGGACCTGGTGGCTCCAATGTCAGCAAGAAGGGTaGCCGGTAGTCCAAGGGCAGCTTCTCATACCTGATGAGCAGTTT +
Preference number: 5 (lower is better)
Translates to: HQGQWTWWLQCQQEG*PVVQGQLLIPDEQF
Trigger: AAACTGCTCATCAGGTATGAGAAGCTGCCCTTGGACTACCGGGCACCCTTCTTGCTGACATTGGAGCCACCAGGTCCACTGCCCTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp CGTGATCTCAGGACCCTGAACATGGCAGAAGCCAGTCCCTTCCCATaGAGCTCCTGCTTGAGGAAAGACCCGAGCACAGCAGGAACTAGA +
Preference number: 5 (lower is better)
Translates to: RDLRTLNMAEASPFP*SSCLRKDPSTAGTR
Trigger: TCTAGTTCCTGCTGTGCTCGGGTCTTTCCTCAAGCAGGAGCTGCATGGGAAGGGACTGGCTTCTGCCATGTTCAGGGTCCTGAGATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471177.1
CDS GCA 90 bp TTGCTATCTGTGTACTTGGGAGAGTGCAGGAAGATGAGCAAGTTCTaGCGTAGGTACCATGCCAGGGCTGGAAGCCAGGGCCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LLSVYLGECRKMSKF*RRYHARAGSQGLQE
Trigger: CTCCTGCAGGCCCTGGCTTCCAGCCCTGGCATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACACAGATAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp AGGAATAGAGGAGAAATGCCCGGTGGTAGACAGTCAGACCCAGGTTaGCTGGCTCCGGCTCAGGACAAGTGGACAGGTAGGACCCAAATG +
Preference number: 5 (lower is better)
Translates to: RNRGEMPGGRQSDPG*LAPAQDKWTGRTQM
Trigger: CATTTGGGTCCTACCTGTCCACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGTCTACCACCGGGCATTTCTCCTCTATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 90 bp CACAACGTCACAGGAGAAATGGCCAGGGACAAACTGCATTGTGGCTaGCAGGTACCCACGGGGCGCACAGCTCTCATCAGCAGCATAATC +
Preference number: 5 (lower is better)
Translates to: HNVTGEMARDKLHCG*QVPTGRTALISSII
Trigger: GATTATGCTGCTGATGAGAGCTGTGCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTGGCCATTTCTCCTGTGACGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp TCGGCCAGGGCCTGGCGAGCTGCTCCTCGGAGTTTCTCCTCCAGCTaGACAATACTAATGTTCCCCTTTTCCCACACATCCAATCGAAGC +
Preference number: 5 (lower is better)
Translates to: SARAWRAAPRSFSSS*TILMFPFSHTSNRS
Trigger: GCTTCGATTGGATGTGTGGGAAAAGGGGAACATTAGTATTGTGCAGCTGGAGGAGAAACTCCGAGGAGCAGCTCGCCAGGCCCTGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp AGCTCTCCAGCACTGATGGGCATGGTGGCTGGGGTAGAACGCTGCTaGCAGGTTACAAACAGGTTTTCCATCTTCATCTGGCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSPALMGMVAGVERC*QVTNRFSIFIWRSS
Trigger: GCTGGAGCGCCAGATGAAGATGGAAAACCTGTTTGTAACCTGGCAGCAGCGTTCTACCCCAGCCACCATGCCCATCAGTGCTGGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp AGCCAGGCCATAGCAGTGAATCAATCACTGGGCCAGCCCGCCTACTaGATTACTCTACTGCCCAGCAAATGGGACATGGAGCCATGCTGC +
Preference number: 5 (lower is better)
Translates to: SQAIAVNQSLGQPAY*ITLLPSKWDMEPCC
Trigger: GCAGCATGGCTCCATGTCCCATTTGCTGGGCAGTAGAGTAATGCAGTAGGCGGGCTGGCCCAGTGATTGATTCACTGCTATGGCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp TCACGCCTCAGTGTGCACACAAATCACCTGGGGAGACTGTCAACCTaGAGATCCCGAGTCAACAGTCTGAAATGTGGCCGGAGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SRLSVHTNHLGRLST*RSRVNSLKCGRRAC
Trigger: GCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGTTGACAGTCTCCCCAGGTGATTTGTGTGCACACTGAGGCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp CCGTCATGGATAGGAAGCAGTCCAGCTGGGGGTCGATGTCCCCAATaGATTTGGCATGGACTGCTTCTAGGAGTTCCTCCAGCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSWIGSSPAGGRCPQ*IWHGLLLGVPPALP
Trigger: TGGCAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTTCCTATCCATGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 90 bp ATAGAGGAGAAATGCCCGGTGGTAGACAGTCAGACCCAGGTTGCCTaGCTCCGGCTCAGGACAAGTGGACAGGTAGGACCCAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: IEEKCPVVDSQTQVA*LRLRTSGQVGPKCC
Trigger: GCAACATTTGGGTCCTACCTGTCCACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGTCTACCACCGGGCATTTCTCCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 90 bp CTGGCCCAAATACAAAACTCAGTGGCAGAGTTTGGCGAAGGCAGGTaGAGCGTCCAGGAGAACTATGGATATGGGCAGCTGCGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: LAQIQNSVAEFGEGR*SVQENYGYGQLRGA
Trigger: TGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 90 bp TTCCGGTTCACCACAGAGAAGGCATTGAGCACAGAGCGCAGGGCCTaGATGGCTGGGGGAATAACATGGGCTCAGGAAACTGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: FRFTTEKALSTERRA*MAGGITWAQETAFS
Trigger: GGAAAAGGCAGTTTCCTGAGCCCATGTTATTCCCCCAGCCATCCAGGCCCTGCGCTCTGTGCTCAATGCCTTCTCTGTGGTGAACCGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp AGGGAAGGTGAAGATGAGATCAGGAAGGCGAGAGACAGGTGGGTCTaGCTGTCTCCACTCAGTGCTCCTCCTGCTTACCTGGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: REGEDEIRKARDRWV*LSPLSAPPAYLECQ
Trigger: CTGGCATTCCAGGTAAGCAGGAGGAGCACTGAGTGGAGACAGCCAGACCCACCTGTCTCTCGCCTTCCTGATCTCATCTTCACCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp CTGTGCTGCCTCAGGGCTACAGCTGAACACGCTTTGGATGACCGATaGGGTCAGCCTTGTAGTGAGTGCAGTCATGGCACCAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: LCCLRATAEHALDDR*GQPCSECSHGTRMS
Trigger: GCTCATTCTGGTGCCATGACTGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp TTCCCTCCTTCCGTGGGAAGAAGCACAAGATTTCCCCTGCTGCTGTaGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCTGTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: FPPSVGRSTRFPLLL*PSGTPSARMVSVGR
Trigger: CCTTCCCACAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGTGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLCGLHS*VQMTEE
Trigger: TTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACA...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGAGGGTGTTCCACTCTaGACCCCTGACCTCGCTACC +
Preference number: 5 (lower is better)
Translates to: ARPSMENTASTRVYAERGEGVPL*TPDLAT
Trigger: GGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGAGAGTAGATGGGCTCTaGGCTTCGGGACAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGRVDGL*ASGQSE
Trigger: CTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAGATATGTCTGTCCACTaGGCCCACAGGACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGDMSVH*AHRTSS
Trigger: GCTGCTCGTCCTGTGGGCCAAGTGGACAGACATATC...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGCCTGGAGGGATGTAGAAGAGTGGCACTCCGCTCTTGGTGCTGTCAGGAAGCGATCTGGTCTGTCTGGTaGATGCTCTGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: SLEGCRRVALRSWCCQEAIWSVW*MLCSVF
Trigger: GAACACGCTGCAGAGCATCAACCAGACAGACCAGAT...CGCTTCCTGACAGCACCAAGAGCGGAGTGCCACTCTTCTACATCCCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp GCTGCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGAGTGGCACTCCGCTCTaGGTGCTGTCAGGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: AALVHRTHHAKCRSRLPSSGTPL*VLSGSV
Trigger: CACGCTTCCTGACAGCACCAAGAGCGGAGTGCCACT...CGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp TCTGGGAAGCCTGACGCCCAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGACATCGCTGCCAGGAATTaGCATCCATGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: SGKPDAQRKPVSLDGMVDIAARN*HPWTAL
Trigger: CAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGAT...GTCCACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAGGCTTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCAAGCCTGACACAATCTaGTGCCGGGCCGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: FLPIVGERTFLCPPTLSIKPDTI*CRAGAG
Trigger: ACCAGCACCGGCCCGGCACAAGATTGTGTCAGGCTT...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATTGGGCGTTGGCTCCTaGCTTTGTACCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGLGVGS*LCTRWG
Trigger: CCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGCCTTTTCGTTTCACCTaGGGCGTTGGCTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEPFRFT*GVGSLL
Trigger: AAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGG...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTCCGTGGGTGGAGAGCTaGCGGGATCTCAGAATACGT +
Preference number: 5 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAPWVES*RDLRIR
Trigger: ACGTATTCTGAGATCCCGCAAGCTCTCCACCCACGG...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GAGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTGCTGGAATGGTTAGCTGCCTCCTaGTACCGGGGTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: EPSSPGELNFPYLFQLLEWLAAS*YRGSIQ
Trigger: CTGGATGGAACCCCGGTACAAGGAGGCAGCTAACCA...TTCCAGCAGTTGAAACAGATAGGGGAAATTCAGCTCTCCGGGGCTGCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACGGGCTCCCATCAGTCTaGGTTTTAGGGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHGLPSV*VLGQEK
Trigger: CTTCTCCTGCCCTAAAACCAAGACTGATGGGAGCCC...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTATGGACAGCTGTGAGTaGACAGCCTGCCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAMDSCE*TACPIG
Trigger: CCCAATGGGGCAGGCTGTCAACTCACAGCTGTCCAT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAACCAGGGCATACTCGTaGTGTTCTGGGCCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGTRAYS*CSGPPG
Trigger: GCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTTGATTCCTGTGCTCTaGAGGCTCACGGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGLIPVL*RLTVPS
Trigger: GGAGGGGACCGTGAGCCTCAAGAGCACAGGAATCAA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAACAGTCAGACCCAGGTaGCCTGGCTCCGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGTVRPR*PGSGSG
Trigger: TCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGT...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAAATTGGGACCCTCCTTaGGCCAGTGTGACCTCTCGG +
Preference number: 5 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGNWDPP*ASVTSR
Trigger: CCGAGAGGTCACACTGGCCAAAGGAGGGTCCCAATT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAACAGCTTTACCTCCAATaGGGACCCTCCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQQLYLQ*GPSFGQ
Trigger: CTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCTG...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTAGAAGCAGTCGCTGGTaGACCTCCCTGCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSRSSRW*TSLQIS
Trigger: GGAGATCTGCAGGGAGGTCAACCAGCGACTGCTTCT...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTCAGGGACAAACTGCATaGTGGCTGCCAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSQGQTA*WLPGTH
Trigger: GTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTG...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAGCCTGGAATGTCTGCTaGGAGCTGGATGTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQAWNVC*ELDVAK
Trigger: CTTAGCCACATCCAGCTCCAAGCAGACATTCCAGGC...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CCCGTGGCCGGCTGGTGCTATAGAAAAGGAGGAGGGATAAGAGGATaGGGCAGGCTAGTGGCATGCAGTCATGGTGATCAGACCCAGAAT +
Preference number: 5 (lower is better)
Translates to: PVAGWCYRKGGGIRG*GRLVACSHGDQTQN
Trigger: ATTCTGGGTCTGATCACCATGACTGCATGCCACTAGCCTGCCTCATCCTCTTATCCCTCCTCCTTTTCTATAGCACCAGCCGGCCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 90 bp TTTGCTCTATCCCAGATTCCATCAGGGTCTGCCACAGACTCTAGATaGCTACAGGCCAGACCAGGCACTGTGCTGCCTCAGGGCTACAGC +
Preference number: 5 (lower is better)
Translates to: FALSQIPSGSATDSR*LQARPGTVLPQGYS
Trigger: GCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGTCTGTGGCAGACCCTGATGGAATCTGGGATAGAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp ATCCATCAGAGACCCTCGGCTCTGGGGGCAGAGGACCCCATTCCTTaGTCTGACACAGCTGTATCAGGTATTCAAAGCTCAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: IHQRPSALGAEDPIP*SDTAVSGIQSSAWS
Trigger: GCTCCATGCTGAGCTTTGAATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTCTGCCCCCAGAGCCGAGGGTCTCTGATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp GGCAGTGGGGGCCCGAGGCCATCATCTGACCTTAAAGATGATGGCTaGCCTGGGGATCGTGGAAATGAAGCACTGCTTTCAGATGTTGAC +
Preference number: 5 (lower is better)
Translates to: GSGGPRPSSDLKDDG*PGDRGNEALLSDVD
Trigger: GTCAACATCTGAAAGCAGTGCTTCATTTCCACGATCCCCAGGGCAGCCATCATCTTTAAGGTCAGATGATGGCCTCGGGCCCCCACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638642.1
ENST00000648058.1
CDS GCA 90 bp GAGAGCCTCAGTGTGCCTCTCACCGCAGTAATATTCAGGGTTCAGTaGTTCCCCACTGCGCAGGAAGGAATAGAGGAGAAATGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: ESLSVPLTAVIFRVQ*FPTAQEGIEEKCPV
Trigger: CACCGGGCATTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGTGAGAGGCACACTGAGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS GCA 90 bp CACATTTCCCTCCTTCCGTGGGAAGAAGCACAAGATTTCCCCTGCTaGTGTGGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: HISLLPWEEAQDFPC*CGLVERPLPEWFLW
Trigger: CCACAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGAAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp ATCTGCTCCCTAACGCTCTGCTTGGTGATCCATCCCGGGATGATTTaGTCTCCCAAGGCTTCAGTTACCGCCTGTTCACAGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ICSLTLCLVIHPGMI*SPKASVTACSQSCC
Trigger: GCAGCAGCTCTGTGAACAGGCGGTAACTGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp CTGGTGGGAAATGGAAGAGACGGAATTCTCAAGAGCAGTTCTGGATaGCGAGGCTCCACGCTTGCTTCACCAGCTCCCATACGGGTACCA +
Preference number: 5 (lower is better)
Translates to: LVGNGRDGILKSSSG*RGSTLASPAPIRVP
Trigger: TGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATTTCCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp ACTCGGAAGGGCCGAAGCAGCCCGCCTAAGCAGCGGGACAGGGCATaGAAAACTTCATCAAACAAGATCTCCCCTGTGGAATCATCCACA +
Preference number: 5 (lower is better)
Translates to: TRKGRSSPPKQRDRA*KTSSNKISPVESST
Trigger: TGTGGATGATTCCACAGGGGAGATCTTGTTTGATGAAGTTTTCCATGCCCTGTCCCGCTGCTTAGGCGGGCTGCTTCGGCCCTTCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp GGTCTTCTGCCTGGCTCTGGGGATCGTACTGCTGCTGCAGCATGGTaGCCACCTTATCCTCAAAGAGGCAGAGCTGCTCATATATCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLPGSGDRTAAAAW*PPYPQRGRAAHISA
Trigger: AGCAGATATATGAGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 90 bp TCCTTTCTGGGGCTCCAGCCTACTGACAAAGTTCTGACAGCTCCTTaGGTTGTCAGTTCCAGAGCCTGGCCCTCAGGATCTCAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: SFLGLQPTDKVLTAP*VVSSRAWPSGSQAK
Trigger: CTTGGCTTGAGATCCTGAGGGCCAGGCTCTGGAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGTAGGCTGGAGCCCCAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCACCATGCATGGGGCCTaGGAAATGATACGGACCATG +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSTMHGA*EMIRTM
Trigger: CATGGTCCGTATCATTTCCAAGGCCCCATGCATGGT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGAGAAATGGGGTGTCGAGAAGCTGTCTTaGGTGGAGGTAGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GCMRQTPSVATQCKEKWGVEKLS*VEVECG
Trigger: CCCACACTCTACCTCCACCAAAGACAGCTTCTCGAC...ACCCCATTTCTCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGACCTCAGTGACCAGATaGAGCTCTGAGTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGTSVTR*SSESPS
Trigger: GGAGGGAGACTCAGAGCTCAATCTGGTCACTGAGGT...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACCGTGGGTGGAGAGCTaGCGGGATCTCAGAATACGT +
Preference number: 5 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGPWVES*RDLRIR
Trigger: ACGTATTCTGAGATCCCGCAAGCTCTCCACCCACGG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTCCGTGGGTGGAGAGCTaGCGGGATCTCAGAATACGT +
Preference number: 5 (lower is better)
Translates to: QILQRPNRLRRNWQEGITPWVES*RDLRIR
Trigger: ACGTATTCTGAGATCCCGCAAGCTCTCCACCCACGG...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGGGGGTTCACAAGCCTaGCATAGCAGCGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSGGSQA*HSSATE
Trigger: CTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCCC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGAGGCTTTGTCTCCTCTaGAGGGGGTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: KFKGLLREIKQGASRIWQRLCLL*RGSLQA
Trigger: GGCCTGGAGGGACCCCCTCAAGAGGAGACAAAGCCT...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCAGGCTTTGTCTCCTCTaGAGGGGGTCCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRARLCLL*RGSLQA
Trigger: GGCCTGGAGGGACCCCCTCAAGAGGAGACAAAGCCT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCTGCATGCCAACCATTaGTTCCCTCAGCGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGLHANH*FPQRFQ
Trigger: CTGGAAGCGCTGAGGGAACAAATGGTTGGCATGCAG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGAAGTGGTTCCGGCTGTaGCTATCTGTGTACTTGGGA +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLKWFRL*LSVYLG
Trigger: TCCCAAGTACACAGATAGCAACAGCCGGAACCACTT...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGAAGTGGTTCCGGCTGTaGCTATCTGTGTACTTGGGA +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEKWFRL*LSVYLG
Trigger: TCCCAAGTACACAGATAGCAACAGCCGGAACCACTT...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTATCAGGTCCCGCACCTaGTCACACTCCTCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAIRSRT*SHSSVN
Trigger: GTTCACAGAGGAGTGTGACAAGGTGCGGGACCTGAT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCACCAGGGCATACTCGTaGTGTTCTGGGCCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRATRAYS*CSGPPG
Trigger: GCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGT...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCGTGAAACAGGCTGTGTaGATGACAGACTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSVKQAV*MTDSRW
Trigger: CCACCTGGAGTCTGTCATCAACACAGCCTGTTTCAC...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGGGAGTTCCTGCCCATaGTTGGTGAGAGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: QILQRPNRLRRNWQEGITGSSCP*LVRGPS
Trigger: GGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGCAGCTTTACCTCCAATaGGGACCCTCCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGQLYLQ*GPSFGQ
Trigger: CTGGCCAAAGGAGGGTCCCAATTGGAGGTAAAGCTG...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCCAAGGATTCACAGCTaGTGGGGGCCTCTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAPRIHS*WGPLGS
Trigger: GGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGG...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GACACAGTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACAGGAGTGGGCATTGCTaGATGGGCAGGAAGTTGAGT +
Preference number: 5 (lower is better)
Translates to: DTVEGLSWLRSYWDRRGHRSGHC*MGRKLS
Trigger: ACTCAACTTCCTGCCCATCAAGCAATGCCCACTCCT...GTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTTCATACTGGGATAGGCGGGGCCACCCAGAGGCTGGCCAGTGAGGGCCCGCACTACAGCTTTCAAATGTaGCTTAACGAACAGATAGCA +
Preference number: 5 (lower is better)
Translates to: VHTGIGGATQRLASEGPHYSFQM*LNEQIA
Trigger: TGCTATCTGTTCGTTAAGCAACATTTGAAAGCTGTA...GTGCGGGCCCTCACTGGCCAGCCTCTGGGTGGCCCCGCCTATCCCAGTATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp GAATCATTTTGCAAGGGAGGAAACAGACCCACAAAGCTGCCACTGTaGGTGGCAAGGCTGGGCTTGGAGTCCAGGTCTAGACTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ESFCKGGNRPTKLPL*VARLGLESRSRLQG
Trigger: GCCTTGCAGTCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGTTTCCTCCCTTGCAAAATGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 90 bp ACGTGCCGCTCAGCCTCTCCTTGCTCCTCAAAGGGTGCAGCACAGTaGCAGACAAGCAGAGACACATCAAAGTCATCCTGGTGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: TCRSASPCSSKGAAQ*QTSRDTSKSSWCRS
Trigger: ACTTCGACACCAGGATGACTTTGATGTGTCTCTGCTTGTCTGTCACTGTGCTGCACCCTTTGAGGAGCAAGGAGAGGCTGAGCGGCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp GAGAGCAAAGTGCAAGAGGAACACAGGGGCATCAGAGAGTGGGAGTaGTACATGCCGAGGCTTCCTCAGAGTAGATGGGCTCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ESKVQEEHRGIREWE*YMPRLPQSRWALGF
Trigger: GAAGCCAAGAGCCCATCTACTCTGAGGAAGCCTCGGCATGTATCACTCCCACTCTCTGATGCCCCTGTGTTCCTCTTGCACTTTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 90 bp CAAGGCTTCAAAGTCCAAGGGGTCCTTTCTGGGGCTCCAGCCTACTaGCAAAGTTCTGACAGCTCCTTGGGTTGTCAGTTCCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: QGFKVQGVLSGAPAY*QSSDSSLGCQFQSL
Trigger: CAGGCTCTGGAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGTAGGCTGGAGCCCCAGAAAGGACCCCTTGGACTTTGAAGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp GGTGCTGAGAGCCGCAGTAATATTCAGGGTTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGAGAAATGCCCGGTGGTAGACAGTCA +
Preference number: 5 (lower is better)
Translates to: GAESRSNIQGSVLPH*AGRNRGEMPGGRQS
Trigger: TGACTGTCTACCACCGGGCATTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGCTCTCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp AGACGGAATTCTCAAGAGCAGTTCTGGATGCCGAGGCTCCACGCTTaGTTCACCAGCTCCCATACGGGTACCACACTGAGGCTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: RRNSQEQFWMPRLHA*FTSSHTGTTLRLLY
Trigger: ATAAAGGAGCCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp ATTCCTTGCTCTGACACAGCTGTATCAGGTATTCAAAGCTCAGCATaGAGCCTATGCAGGCAGCATCCCGTGGGTGGAGAGCTTGCGGGA +
Preference number: 5 (lower is better)
Translates to: IPCSDTAVSGIQSSA*SLCRQHPVGGELAG
Trigger: TCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAATACCTGATACAGCTGTGTCAGAGCAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp ACTGGTCTTCTGCCTGGCTCTGGGGATCGTACTGCTGCTGCAGCATaGTGGCCACCTTATCCTCAAAGAGGCAGAGCTGCTCATATATCT +
Preference number: 5 (lower is better)
Translates to: TGLLPGSGDRTAAAA*WPPYPQRGRAAHIS
Trigger: AGATATATGAGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 90 bp GTGAGGGAACGCTCTGGCCCAAATACAAAACTCAGTGGCAGAGTTTaGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATGGATATGGGCA +
Preference number: 5 (lower is better)
Translates to: VRERSGPNTKLSGRV*RRQVERPGELWIWA
Trigger: TGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 90 bp ATGGAGGCGGCGGAACTCCTCCTTGAATTGTGTGAGGGAACGCTCTaGCCCAAATACAAAACTCAGTGGCAGAGTTTGGCGAAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: MEAAELLLELCEGTL*PKYKTQWQSLAKAG
Trigger: ACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACACAATTCAAGGAGGAGTTCCGCCGCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp GCTGCCACAAAGAAGAAGCCACTGTCAGGGTCTTCAAGAAGAACATaGCCAGGGAGATGGAGGCGGCGGAACTCCTCCTTGAATTGTGTG +
Preference number: 5 (lower is better)
Translates to: AATKKKPLSGSSRRT*PGRWRRRNSSLNCV
Trigger: CACACAATTCAAGGAGGAGTTCCGCCGCCTCCATCTCCCTGGCCATGTTCTTCTTGAAGACCCTGACAGTGGCTTCTTCTTTGTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp AGGTATGGCTGCACTGGCTGCCCAAAACACATTTCCCTCCTTCCGTaGGAAGAAGCACAAGATTTCCCCTGCTGCTGTGGCCTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: RYGCTGCPKHISLLP*EEAQDFPCCCGLVE
Trigger: TTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGAAATGTGTTTTGGGCAGCCAGTGCAGCCATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp AAGTCTTCTCTTGTAATGCCTCCTCTCTTGAACCTCAGCTCTGGCTaGGCCCATCTCTGTGGGCTCCTTAATGCCCTGTGCTCGTGTCCA +
Preference number: 5 (lower is better)
Translates to: KSSLVMPPLLNLSSG*AHLCGLLNALCSCP
Trigger: TGGACACGAGCACAGGGCATTAAGGAGCCCACAGAGATGGGCCCAGCCAGAGCTGAGGTTCAAGAGAGGAGGCATTACAAGAGAAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp AAACCTGGTGGGAAATGGAAGAGACGGAATTCTCAAGAGCAGTTCTaGATGCCGAGGCTCCACGCTTGCTTCACCAGCTCCCATACGGGT +
Preference number: 5 (lower is better)
Translates to: KPGGKWKRRNSQEQF*MPRLHACFTSSHTG
Trigger: ACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATTTCCCACCAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGAATCTGGTCTGTCTGGTaGATGCTCTGCAGCGTGTTC +
Preference number: 5 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGIWSVW*MLCSVF
Trigger: GAACACGCTGCAGAGCATCAACCAGACAGACCAGAT...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCTTCTCAGGTGCTTAGATACTACCTTGCACAGTCATTCCCCTGGACTGGAAGGGGGGTGTGCAAGTGCTaGGGGATTGGTGTGTCATGC +
Preference number: 5 (lower is better)
Translates to: ASQVLRYYLAQSFPWTGRGVCKC*GIGVSC
Trigger: GCATGACACACCAATCCCCAAGCACTTGCACACCCC...CCTTCCAGTCCAGGGGAATGACTGTGCAAGGTAGTATCTAAGCACCTGAGAAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GCATTGTCACTAGCCAGGGTCACACTGAGGACAGGGACGTGGGACTTTGTAGCTCCTTTTCGTTTCACCTaGGGCGTTGGCTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: ALSLARVTLRTGTWDFVAPFRFT*GVGSLL
Trigger: AAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGG...AGCTACAAAGTCCCACGTCCCTGTCCTCAGTGTGACCCTGGCTAGTGACAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGTCGAGAAGCTGTCTTaGGTGGAGGTAGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGVEKLS*VEVECG
Trigger: CCCACACTCTACCTCCACCAAAGACAGCTTCTCGAC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGGGGGTTCACAAGCCTaGCATAGCAGCGCCACTGAG +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAGGSQA*HSSATE
Trigger: CTCAGTGGCGCTGCTATGCAAGGCTTGTGAACCCCC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTGGTTAGCTGCCTCCTaGTACCGGGGTTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSWLAAS*YRGSIQ
Trigger: CTGGATGGAACCCCGGTACAAGGAGGCAGCTAACCA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTACACTCAGGGAAGTAAAAGCGGAGTCTCCTGTGGCCTGGGTGCTGCCGACTGGGAGATTCCTACTATaGTGTGGATGTCCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: PTLREVKAESPVAWVLPTGRFLL*CGCPQN
Trigger: GTTCTGAGGACATCCACACAATAGTAGGAATCTCCC...AGTCGGCAGCACCCAGGCCACAGGAGACTCCGCTTTTACTTCCCTGAGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GAAGGGCTGGTCAGTCCTGCCTCTGGCAGGCAATCTGGTAGGCCCATGATTCAAATGTCCCCAATGGATTaGGCATGGACTGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: EGLVSPASGRQSGRPMIQMSPMD*AWTASR
Trigger: CCTAGAAGCAGTCCATGCCAAATCCATTGGGGACAT...TTGAATCATGGGCCTACCAGATTGCCTGCCAGAGGCAGGACTGACCAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTGCCCATTGTTGGTGAGAGGACCTTCCTTTGCCCTCCCACCCTTTCAATCTCCCAAGTCTGGGCTTaGGAAATGGCGACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: FLPIVGERTFLCPPTLSISQVWA*EMATAL
Trigger: CAGAGCTGTCGCCATTTCCAAAGCCCAGACTTGGGA...GATTGAAAGGGTGGGAGGGCAAAGGAAGGTCCTCTCACCAACAATGGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGCCTGGACCCCACATTaGTCCACATCTGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRAWTPH*STSVPR
Trigger: CCTGGGGACAGATGTGGACAAATGTGGGGTCCAGGC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGGGAGTTCCTGCCCATaGTTGGTGAGAGGACCTTCC +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGGSSCP*LVRGPS
Trigger: GGAAGGTCCTCTCACCAACAATGGGCAGGAACTCCC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGTTGATTCCTGTGCTCTaGAGGCTCACGGTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSLIPVL*RLTVPS
Trigger: GGAGGGGACCGTGAGCCTCAAGAGCACAGGAATCAA...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCCTTAGTGCACAGGACACATCATGCAAAATGTCGTAGCCGCCTTCCATCGTCAAATTGGGACCCTCCTTaGGCCAGTGTGACCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ALVHRTHHAKCRSRLPSSNWDPP*ASVTSR
Trigger: CCGAGAGGTCACACTGGCCAAAGGAGGGTCCCAATT...TGACGATGGAAGGCGGCTACGACATTTTGCATGATGTGTCCTGTGCACTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGTGGGGCGTGGCCAAATaGGATAGTCCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKWGVAK*DSPGCL
Trigger: GAGGCACCCAGGACTATCCAATTTGGCCACGCCCCA...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTGGGGCGTGGCCAAATaGGATAGTCCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRWGVAK*DSPGCL
Trigger: GAGGCACCCAGGACTATCCAATTTGGCCACGCCCCA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCTGGATAGTACACAGCCTTaGTTGCTCGCTCCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: PCKGAVARGGLVYLAAFLDSTQP*LLAPGK
Trigger: TTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATC...CAGGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GCAAAGGGACTTGACGGTGGCCACAAGTGCTTCAAAGGCAGAGCTGGGATTGGACCTCTTCTAGCTGTGTaGTCCGGCGCTTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: AKGLDGGHKCFKGRAGIGPLLAV*SGAFVS
Trigger: AGAGACAAAAGCGCCGGACAACACAGCTAGAAGAGG...TCCAATCCCAGCTCTGCCTTTGAAGCACTTGTGGCCACCGTCAAGTCCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AACCACGAACAGTGCTCGTTCGTTCGCAGGGCCAGCAAGGAGAGCCCCGCCCCCTACAGCTTTCAAATGTaGCTTAACGAACAGATAGCA +
Preference number: 5 (lower is better)
Translates to: NHEQCSFVRRASKESPAPYSFQM*LNEQIA
Trigger: TGCTATCTGTTCGTTAAGCAACATTTGAAAGCTGTA...GGGGGCGGGGCTCTCCTTGCTGGCCCTGCGAACGAACGAGCACTGTTCGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp TTTGGAAATGGCGACAGCTCTGGGGGAAGCGGCTTAGGAGAACTTTaGTCAGGCTCTGGTACCAGGAGACCGTCATGGATAGGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: FGNGDSSGGSGLGEL*SGSGTRRPSWIGSS
Trigger: ACTGCTTCCTATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCCATTTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 90 bp CAGAGCCTGGCCCTCAGGATCTCAAGCCAAGGCTTGTATTCTTGGTaGGTCTTTGAGGGCAGAGCTGCTCAGAGAATCACATGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: QSLALRISSQGLYSW*VFEGRAAQRITCCS
Trigger: GCTACAGCATGTGATTCTCTGAGCAGCTCTGCCCTCAAAGACTCACCAAGAATACAAGCCTTGGCTTGAGATCCTGAGGGCCAGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 90 bp CGAGGCTCCACGCTTGCTTCACCAGCTCCCATACGGGTACCACACTaGGGCTCCTTTATGCTGTGCACCTCTTCTTTCTTCTCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: RGSTLASPAPIRVPH*GSFMLCTSSFFSSL
Trigger: AAGACTTGAGAAGAAAGAAGAGGTGCACAGCATAAAGGAGCCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS GCA 90 bp ATGCCAGTAGATGGGCTAAGGTCCAACTCAATGACAAACCGATACTaGCAAGCCAGGAAGGTGACCCGGGTGGAAGGTACCAGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: MPVDGLRSNSMTNRY*QARKVTRVEGTRRN
Trigger: ATTCCTCCTGGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGCAGTATCGGTTTGTCATTGAGTTGGACCTTAGCCCATCTACTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS GCA 90 bp GGGGAAGAGGATGTACTGGACAACACAGGTGTGCTTCTCTTCAGCTaGAGCCTGCCCTGGTGGTTCATTCTGAATTGGAAGCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GEEDVLDNTGVLLFS*SLPWWFILNWKLQN
Trigger: GTTCTGGAGCTTCCAATTCAGAATGAACCACCAGGGCAGGCTGCAGCTGAAGAGAAGCACACCTGTGTTGTCCAGTACATCCTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp TCTGACACAGCTGTATCAGGTATTCAAAGCTCAGCATGGAGCCTATaGAGGCAGCATCCCGTGGGTGGAGAGCTTGCGGGATCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SDTAVSGIQSSAWSL*RQHPVGGELAGSQN
Trigger: ATTCTGAGATCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAATACCTGATACAGCTGTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp TGTTGGAAGTGGTTCCGGCTGTTGCTATCTGTGTACTTGGGAGAGTaGAGGAAGATGAGCAAGTTCTGCCGTAGGTACCATGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: CWKWFRLLLSVYLGE*RKMSKFCRRYHARA
Trigger: AGCCCTGGCATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACACAGATAGCAACAGCCGGAACCACTTCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp GGTACCAGCACAAAACCTATGCTCTGCAGATACTGCACATATTGCTaGAGGAAAGCCAAGCTCAGCTCCTTCAGCCAAGGCTCCTCACGG +
Preference number: 5 (lower is better)
Translates to: GTSTKPMLCRYCTYC*RKAKLSSFSQGSSR
Trigger: CCGTGAGGAGCCTTGGCTGAAGGAGCTGAGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCTGCAGAGCATAGGTTTTGTGCTGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 90 bp TGTGCCTCTCACCGCAGTAATATTCAGGGTTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGAGAAATGCCCGGTGGTAGACAGTCA +
Preference number: 5 (lower is better)
Translates to: CASHRSNIQGSVLPH*AGRNRGEMPGGRQS
Trigger: TGACTGTCTACCACCGGGCATTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGTGAGAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS GCA 90 bp GGAATAACATGGGCTCAGGAAACTGCCTTTTCCAGATCCTTCCAATaGTCACCTGCCCTCTCATGCCAATCACATACCCCGAGAGACCCC +
Preference number: 5 (lower is better)
Translates to: GITWAQETAFSRSFQ*SPALSCQSHTPRDP
Trigger: GGGGTCTCTCGGGGTATGTGATTGGCATGAGAGGGCAGGTGAGCATTGGAAGGATCTGGAAAAGGCAGTTTCCTGAGCCCATGTTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp CTGACTGTGCCCGCAGCTCATTCACATACCTGTGAGTTGACAGCCTaGCCCATTGGGATTCGGGAACATTCCAGGGCAAACTGTTTGACA +
Preference number: 5 (lower is better)
Translates to: LTVPAAHSHTCELTA*PIGIREHSRANCLT
Trigger: TGTCAAACAGTTTGCCCTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGGCACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp AAACACATTTCCCTCCTTCCGTGGGAAGAAGCACAAGATTTCCCCTaGTGCTGTGGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KHISLLPWEEAQDFP*CCGLVERPLPEWFL
Trigger: CAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGAAATGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp GTTCTCTCTACCTGTCCTTTACAGCAGTGCTTTCACGCCTCAGTGTaGACACAAATCACCTGGGGAGACTGTCAACCTGCAGATCCCGAG +
Preference number: 5 (lower is better)
Translates to: VLSTCPLQQCFHASV*TQITWGDCQPADPE
Trigger: CTCGGGATCTGCAGGTTGACAGTCTCCCCAGGTGATTTGTGTGCACACTGAGGCGTGAAAGCACTGCTGTAAAGGACAGGTAGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp CTCGTGTCCACCACCACAGTTCTCTCTACCTGTCCTTTACAGCAGTaGTTTCACGCCTCAGTGTGCACACAAATCACCTGGGGAGACTGT +
Preference number: 5 (lower is better)
Translates to: LVSTTTVLSTCPLQQ*FHASVCTQITWGDC
Trigger: ACAGTCTCCCCAGGTGATTTGTGTGCACACTGAGGCGTGAAAGCACTGCTGTAAAGGACAGGTAGAGAGAACTGTGGTGGTGGACACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 90 bp GGATTGTCTTGTCGTCCCCTTATGTCCATCTGCTCCCTAACGCTCTaGTTGGTGATCCATCCCGGGATGATTTGCTCTCCCAAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GLSCRPLMSICSLTL*LVIHPGMICSPKAS
Trigger: TGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACGACAAGACAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 90 bp AACAACCAGCGGATCTCATTCATGGTGGTCTCAATAGCCAGTCTGTaGGGCGTGGCCAAATTGGATAGTCCTGGGTGCCTCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NNQRISFMVVSIASL*GVAKLDSPGCLSSS
Trigger: AGAAGAGGAGAGGCACCCAGGACTATCCAATTTGGCCACGCCCCACAGACTGGCTATTGAGACCACCATGAATGAGATCCGCTGGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638642.1
ENST00000648058.1
CDS CCA 90 bp CTGGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTACTTGGGAACTaGCCCGCTTGTTCTCACTCTCCCAAACTCCTCATTCCTGACTAT +
Preference number: 5 (lower is better)
Translates to: LAFRLLPSGFLLLGN*PACSHSPKLLIPDY
Trigger: ATAGTCAGGAATGAGGAGTTTGGGAGAGTGAGAACAAGCGGGCCAGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp GTGGCTGCCTGTCTGGAGGAACAGCCAATCAGAAGGCAATTCTACTaGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTACTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: VAACLEEQPIRRQFY*PSGSSPLDFSYLGT
Trigger: AGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCCAGTAGAATTGCCTTCTGATTGGCTGTTCCTCCAGACAGGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp ACGCCAATAAACCCAAAGGGTAGTGTGGCAGTACACAGGAGCCCATaGCCACAGTACAATGCCTCCTTCGACCCTTTTCAGGTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TPINPKGSVAVHRSP*PQYNASFDPFQVSR
Trigger: CCTGGAAACCTGAAAAGGGTCGAAGGAGGCATTGTACTGTGGCCATGGGCTCCTGTGTACTGCCACACTACCCTTTGGGTTTATTGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp TGCTGCTGTGGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCTGTaGGAAGGCCTCCCCATTCTAGCCTCCCTTTTTCATACTGTATTG +
Preference number: 5 (lower is better)
Translates to: CCCGLVERPLPEWFL*EGLPILASLFHTVL
Trigger: CAATACAGTATGAAAAAGGGAGGCTAGAATGGGGAGGCCTTCCCACAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp CAGGACTTGGGGGTGCATGAGGCAAACCCCAAGTGTGGCCACACAATGCAAGGATGGACTGGAAGGTCCTaGTTTATAGGGACTTGGTCT +
Preference number: 5 (lower is better)
Translates to: QDLGVHEANPKCGHTMQGWTGRS*FIGTWS
Trigger: AGACCAAGTCCCTATAAACAAGGACCTTCCAGTCCA...TCCTTGCATTGTGTGGCCACACTTGGGGTTTGCCTCATGCACCCCCAAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCCTCGGGTCAGCTGGTGTCAGCTaGCAGTTCCGAACAAGCATA +
Preference number: 5 (lower is better)
Translates to: RKDSVLKCASHHCNRALGSAGVS*QFRTSI
Trigger: TATGCTTGTTCGGAACTGCAAGCTGACACCAGCTGA...CCCGAGGGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGTGAAACAGGCTGTGTaGATGACAGACTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGVKQAV*MTDSRW
Trigger: CCACCTGGAGTCTGTCATCAACACAGCCTGTTTCAC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGCTGGATGTGGCTAAGATCAGGGGATGATGGGAGGAGGTGGACGGCTCAAAGTGACACAGTAGAGGGCTaGAGTTGGCTACGTTCATAC +
Preference number: 5 (lower is better)
Translates to: SWMWLRSGDDGRRWTAQSDTVEG*SWLRSY
Trigger: GTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC...ACTTTGAGCCGTCCACCTCCTCCCATCATCCCCTGATCTTAGCCACATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTCCTTGCAAGGGTGCTGTGGCAAGAGGAGGCCTGGTGTATTTGGCAGCGTTCCATGTCATCAGTTGTTTaGGGGGAACCCAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: FLARVLWQEEAWCIWQRSMSSVV*GEPKSP
Trigger: TGGGGATTTGGGTTCCCCCAAAACAACTGATGACAT...GGAACGCTGCCAAATACACCAGGCCTCCTCTTGCCACAGCACCCTTGCAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGCGAAGAGCATGGCTGTaGCACAGTAATGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSRRAWL*HSNAPG
Trigger: GCCTGGTGCATTACTGTGCAACAGCCATGCTCTTCG...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTATACAGTGATGCATTaGAGGACAGGCCTATTCCAG +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEYTVMH*RTGLFQ
Trigger: CTGGAATAGGCCTGTCCTCAAATGCATCACTGTATA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp GAAGCTGCTGTCAAGTGTGAACAGCACACAGGCTACCCAGGAGGCTaGAGTTTCTGTGTAAAGGCAGAGGCTCTGGAATGGAATGCTGGT +
Preference number: 5 (lower is better)
Translates to: EAAVKCEQHTGYPGG*SFCVKAEALEWNAG
Trigger: ACCAGCATTCCATTCCAGAGCCTCTGCCTTTACACAGAAACTTCAGCCTCCTGGGTAGCCTGTGTGCTGTTCACACTTGACAGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 90 bp TTACCCTGCATATGCCACCCACCCGAGATGAGAGCAGTAGTGAACTaGTGCCTATGCAGGAATCCTGGCTCTGTCACTTACTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LPCICHPPEMRAVVN*CLCRNPGSVTYCGL
Trigger: AAGGCCACAGTAAGTGACAGAGCCAGGATTCCTGCATAGGCATCAGTTCACTACTGCTCTCATCTCGGGTGGGTGGCATATGCAGGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp AGCTCCAGAACCATGTTGATGATTCCTTCCCCACTGCAGGCGAAGTaGAATCCTTCAGAAAGTCGGACTTCAGTGAGGATGGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SSRTMLMIPSPLQAK*NPSESRTSVRMERS
Trigger: GCTCCTCTCCATCCTCACTGAAGTCCGACTTTCTGAAGGATTCCACTTCGCCTGCAGTGGGGAAGGAATCATCAACATGGTTCTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp CTTGAATTGTGTGAGGGAACGCTCTGGCCCAAATACAAAACTCAGTaGCAGAGTTTGGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATG +
Preference number: 5 (lower is better)
Translates to: LELCEGTLWPKYKTQ*QSLAKAGGASRRTM
Trigger: CATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACACAATTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 90 bp AATTCTACTGGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTACTTaGGAACTGGCCCGCTTGTTCTCACTCTCCCAAACTCCTCATTCC +
Preference number: 5 (lower is better)
Translates to: NSTGLQAPPLWISLT*ELARLFSLSQTPHS
Trigger: GGAATGAGGAGTTTGGGAGAGTGAGAACAAGCGGGCCAGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCCAGTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp CATGAAAAGGGAGCAGGCTTGGACAGAGGTAAACCTGGTGGGAAATaGAAGAGACGGAATTCTCAAGAGCAGTTCTGGATGCCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: HEKGAGLDRGKPGGK*KRRNSQEQFWMPRL
Trigger: GAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATTTCCCACCAGGTTTACCTCTGTCCAAGCCTGCTCCCTTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp GTCATGGAGGTGGGGCCAAGAGAAACCATGAAAAGGGAGCAGGCTTaGACAGAGGTAAACCTGGTGGGAAATGGAAGAGACGGAATTCTC +
Preference number: 5 (lower is better)
Translates to: VMEVGPRETMKREQA*TEVNLVGNGRDGIL
Trigger: GAGAATTCCGTCTCTTCCATTTCCCACCAGGTTTACCTCTGTCCAAGCCTGCTCCCTTTTCATGGTTTCTCTTGGCCCCACCTCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp AACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCGAGGGTGTTCCACTCTaGACCCCTGACCTCGCTACC +
Preference number: 5 (lower is better)
Translates to: NQLPLMSTVSSLPSLSTFEGVPL*TPDLAT
Trigger: GGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTC...GAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp AAGTTCAAGGGTTTGCTGAGGGAAATCAAGCAAGGAGCCAGCAGGATATGGCAGGTGTGTACTTATTTCTaGGCTGGGAGCCATGGCCCG +
Preference number: 5 (lower is better)
Translates to: KFKGLLREIKQGASRIWQVCTYF*AGSHGP
Trigger: CGGGCCATGGCTCCCAGCCAAGAAATAAGTACACAC...CTGCCATATCCTGCTGGCTCCTTGCTTGATTTCCCTCAGCAAACCCTTGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTCCCAAGTCTGGGCTTaGGAAATGGCGACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASQVWA*EMATAL
Trigger: CAGAGCTGTCGCCATTTCCAAAGCCCAGACTTGGGA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGCATGCAGCTGGGGTTTaGGCTCAGGTGAGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKHAAGV*AQVRKV
Trigger: CACCTTTCTCACCTGAGCCAAAACCCCAGCTGCATG...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GTAGAGGGCTTGAGTTGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGTTCATTAATTCCACATaGGGCACATGGCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: VEGLSWLRSYWDRRGHPEFINST*GTWPKL
Trigger: CAGTTTTGGCCATGTGCCCAATGTGGAATTAATGAA...CTCTGGGTGGCCCCGCCTATCCCAGTATGAACGTAGCCAACTCAAGCCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CTCAGGCTCCAGGGGCCAGGGTGCCATAGCCACATACTCAATGCGCATGTTGTGTTCATTAATTCCACATaGGGCACATGGCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: LRLQGPGCHSHILNAHVVFINST*GTWPKL
Trigger: CAGTTTTGGCCATGTGCCCAATGTGGAATTAATGAA...CACAACATGCGCATTGAGTATGTGGCTATGGCACCCTGGCCCCTGGAGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGAGCTGTCATGAAGGTCTaGAAGAAGCAGTCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGAVMKV*KKQSLV
Trigger: AACCAGCGACTGCTTCTTCAAGACCTTCATGACAGC...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTGCTGTCATGAAGGTCTaGAAGAAGCAGTCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QILQRPNRLRRNWQEGITAVMKV*KKQSLV
Trigger: AACCAGCGACTGCTTCTTCAAGACCTTCATGACAGC...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGAGATGACCTGGGTCAGTaGCTCAAATTCCTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGDDLGQ*LKFLLS
Trigger: CGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATC...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGAAGCTGTGGGAGCAGGGTAGGCACCTAACCCTGTCTGGATCAGAGAAAGCTATGTCATCAGTTGTTTaGGGGGAACCCAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: RKLWEQGRHLTLSGSEKAMSSVV*GEPKSP
Trigger: TGGGGATTTGGGTTCCCCCAAAACAACTGATGACAT...AGCTTTCTCTGATCCAGACAGGGTTAGGTGCCTACCCTGCTCCCACAGCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGGCCCGGGTTTTTACAGCACTTCGCTTTTCTAACCACGAACAGTGCTCGTTCGGCAGCAGGAATGGGTTaGGCTCCTTTTCATCTCGCA +
Preference number: 5 (lower is better)
Translates to: RPGFLQHFAFLTTNSARSAAGMG*APFHLA
Trigger: TGCGAGATGAAAAGGAGCCAAACCCATTCCTGCTGC...CGAACGAGCACTGTTCGTGGTTAGAAAAGCGAAGTGCTGTAAAAACCCGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGCCTGGAATGTCTGCTaGGAGCTGGATGTGGCTAAG +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAAWNVC*ELDVAK
Trigger: CTTAGCCACATCCAGCTCCAAGCAGACATTCCAGGC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 90 bp ACTGACAAAGTTCTGACAGCTCCTTGGGTTGTCAGTTCCAGAGCCTaGCCCTCAGGATCTCAAGCCAAGGCTTGTATTCTTGGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: TDKVLTAPWVVSSRA*PSGSQAKACILGES
Trigger: AGACTCACCAAGAATACAAGCCTTGGCTTGAGATCCTGAGGGCCAGGCTCTGGAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCTGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRCGLHS*VQMTEE
Trigger: TTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACA...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCCCAGGAGGAATGGCCTaGGGACCACTGGTTCATCTG +
Preference number: 5 (lower is better)
Translates to: NQLPLMSTVSSLPSLSTFPGGMA*GPLVHL
Trigger: CAGATGAACCAGTGGTCCCAAGGCCATTCCTCCTGG...GAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGAGTTAGAGACCAGCTaGGTAGAGACCTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: ARPSMENTASTRVYAERGELETS*VETSSL
Trigger: TAGAGATGAGGTCTCTACCAAGCTGGTCTCTAACTC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGATATGTCTGTCCACTaGGCCCACAGGACGAGCAGC +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLDMSVH*AHRTSS
Trigger: GCTGCTCGTCCTGTGGGCCAAGTGGACAGACATATC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCATCGCTGCCAGGAATTaGCATCCATGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRIAARN*HPWTAL
Trigger: CAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGAT...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp TTAGCAGGTTACAGGTTGCGGAGAAGGACCGAGGGAAGGAAAGGTTTTGGAAAGATCGCTGCCAGGAATTaGCATCCATGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: LAGYRLRRRTEGRKGFGKIAARN*HPWTAL
Trigger: CAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGAT...CTTTCCAAAACCTTTCCTTCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AGTAGCTCCTCACAGGCATCTACCGCTGTCAGCAAATCCTGGGAGGTCACACTCCTTGTTTATAGGGACTaGGTCTGTGTACCCCCTTAT +
Preference number: 5 (lower is better)
Translates to: SSSSQASTAVSKSWEVTLLVYRD*VCVPPY
Trigger: ATAAGGGGGTACACAGACCAAGTCCCTATAAACAAG...GAGTGTGACCTCCCAGGATTTGCTGACAGCGGTAGATGCCTGTGAGGAGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGAGCTCCAATGTCCCTaGGTAAATGTGATTGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRELQCP*VNVIAA
Trigger: GGCCGCAATCACATTTACCAAGGGACATTGGAGCTC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCGAGCTCCAATGTCCCTaGGTAAATGTGATTGCGGCC +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRAELQCP*VNVIAA
Trigger: GGCCGCAATCACATTTACCAAGGGACATTGGAGCTC...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCGGCTTAGGAGAACTTaGATCAGGCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRRLRRT*IRLWYQ
Trigger: CTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCAGGGACAAACTGCATaGTGGCTGCCAGGTACCCAC +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLQGQTA*WLPGTH
Trigger: GTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTG...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTGGCAGCCTGCTGTGTaGGTCTCCTCCACTGCAAGA +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLWQPAV*VSSTAR
Trigger: TCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCCA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCGAAGTTGAGTGTTCCTaGCAAGGGTGCTGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLREVECS*QGCCGK
Trigger: CTTGCCACAGCACCCTTGCAAGGAACACTCAACTTC...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACAAACTTGGGAAGGAGCTCTATTCACAGCACCCGACATGCTGCTAGGAGGACTTATGCCACTCTGTTaGCCACTCTTTCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: GQTWEGALFTAPDMLLGGLMPLC*PLFHAH
Trigger: GTGAGCATGAAAGAGTGGCAAACAGAGTGGCATAAG...TCCTCCTAGCAGCATGTCGGGTGCTGTGAATAGAGCTCCTTCCCAAGTTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp AGAAGTAGTGGGGATTGGAAGGCACTGTGCGGAAGTGGAGACGACTaGTCTCTAGGAACTTCTCCTGTTGTGGGGTTTAGAAGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: RSSGDWKALCGSGDD*SLGTSPVVGFRRRL
Trigger: TAACCTCCTTCTAAACCCCACAACAGGAGAAGTTCCTAGAGATCAGTCGTCTCCACTTCCGCACAGTGCCTTCCAATCCCCACTACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478140.1
CDS TCA 90 bp ACAGCAGGCAGATGTGTCTCCTTCTTCTCCCATAAGCTCAGCCTCTaGAAACTCCAGGTCACTGATTTTTCTGTCTACTGTGTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: TAGRCVSFFSHKLSL*KLQVTDFSVYCVPR
Trigger: CCTCGGGACACAGTAGACAGAAAAATCAGTGACCTGGAGTTTTCAGAGGCTGAGCTTATGGGAGAAGAAGGAGACACATCTGCCTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478140.1
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp CAATGCCTCCTTCGACCCTTTTCAGGTTTCCAGGGAGCCTTCTGGTaGATCAAAGTGGCAGTTTTCTCAGAGAAGCTGCTGTCAAGTGTG +
Preference number: 5 (lower is better)
Translates to: QCLLRPFSGFQGAFW*IKVAVFSEKLLSSV
Trigger: CACACTTGACAGCAGCTTCTCTGAGAAAACTGCCACTTTGATTCACCAGAAGGCTCCCTGGAAACCTGAAAAGGGTCGAAGGAGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 90 bp GCCCTGGGGATCGTGGAAATGAAGCACTGCTTTCAGATGTTGACCTaGACAGGGTGGGAACAAGTCAAAGGTCAGGAGTTACTATCCTAC +
Preference number: 5 (lower is better)
Translates to: ALGIVEMKHCFQMLT*TGWEQVKGQELLSY
Trigger: GTAGGATAGTAACTCCTGACCTTTGACTTGTTCCCACCCTGTTCAGGTCAACATCTGAAAGCAGTGCTTCATTTCCACGATCCCCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638642.1
CDS GCA 90 bp TTTATATGGAATCATTTTGCAAGGGAGGAAACAGACCCACAAAGCTaGCACTGTGAGTGGCAAGGCTGGGCTTGGAGTCCAGGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: FIWNHFAREETDPQS*HCEWQGWAWSPGLD
Trigger: GTCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGTTTCCTCCCTTGCAAAATGATTCCATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS GCA 90 bp TCTTTGAGGGCAGAGCTGCTCAGAGAATCACATGCTGTAGCTCGATaGCCGGTACTGGAAGGGTTTTACATGTATCTGTGTAGTCCCGTT +
Preference number: 5 (lower is better)
Translates to: SLRAELLRESHAVAR*PVLEGFYMYLCSPV
Trigger: AACGGGACTACACAGATACATGTAAAACCCTTCCAGTACCGGGCATCGAGCTACAGCATGTGATTCTCTGAGCAGCTCTGCCCTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS-3UTR CAA 90 bp GGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTACGTTCACGACCATGCATGGGGCCTaGGAAATGATACGGACCATG +
Preference number: 5 (lower is better)
Translates to: GEIPTIVWMSSEQVSTFTTMHGA*EMIRTM
Trigger: CATGGTCCGTATCATTTCCAAGGCCCCATGCATGGT...CGTGAACGTAGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp ACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGATTTTGGGCGTTGGCTCCTaGCTTTGTACCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TWSVYPLIHHSSIILTWILGVGS*LCTRWG
Trigger: CCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAA...AATCCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GGGACTTGGTCTGTGTACCCCCTTATCCATCATTCAAGTATAATCCTAACCTGGACCTCAGTGACCAGATaGAGCTCTGAGTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GTWSVYPLIHHSSIILTWTSVTR*SSESPS
Trigger: GGAGGGAGACTCAGAGCTCAATCTGGTCACTGAGGT...CCAGGTTAGGATTATACTTGAATGATGGATAAGGGGGTACACAGACCAAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp AATCAGAGGAAAGACTCAGTATTAAAGTGCGCGTCCCATCATTGCAACCGGGCCTCAGCTGGTGTCAGCTaGCAGTTCCGAACAAGCATA +
Preference number: 5 (lower is better)
Translates to: NQRKDSVLKCASHHCNRASAGVS*QFRTSI
Trigger: TATGCTTGTTCGGAACTGCAAGCTGACACCAGCTGA...GGCCCGGTTGCAATGATGGGACGCGCACTTTAATACTGAGTCTTTCCTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTTAGCAGGTTACAGGTaGCGGAGAAGGACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLLAGYR*RRRTEG
Trigger: TCCCTCGGTCCTTCTCCGCAACCTGTAACCTGCTAA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 90 bp CCACCTTCCAAGGGCCACATACCGAAGATAGTACACAGCCTTTGTTaGTCGCTCCTGGTAAACAAACATGTTTTTCCGGTTCACCACAGA +
Preference number: 5 (lower is better)
Translates to: PPSKGHIPKIVHSLC*SLLVNKHVFPVHHR
Trigger: TCTGTGGTGAACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTTGGAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp TTGCTTCACCAGCTCCCATACGGGTACCACACTGAGGCTCCTTTATaGTGTGCACCTCTTCTTTCTTCTCAAGTCTTCTTCAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: LLHQLPYGYHTEAPL*CAPLLSSQVFFRMV
Trigger: CACCATTCTGAAGAAGACTTGAGAAGAAAGAAGAGGTGCACAGCATAAAGGAGCCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 90 bp TATGCACACCAGCTGCAGAGGAGGGATAAACTTTGTCCTGGGCTTTaGAAGACAGAAACGCCAATAAACCCAAAGGGTAGTGTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: YAHQLQRRDKLCPGL*KTETPINPKGSVAV
Trigger: TACTGCCACACTACCCTTTGGGTTTATTGGCGTTTCTGTCTTCCAAAGCCCAGGACAAAGTTTATCCCTCCTCTGCAGCTGGTGTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp TCTTCCCACAGTCTCCCTTCAATCCTTTACCACAATGCCAGTAGATaGGCTAAGGTCCAACTCAATGACAAACCGATACTGCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SSHSLPSILYHNASR*AKVQLNDKPILPSQ
Trigger: CTGGCTTGGCAGTATCGGTTTGTCATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTGGTAAAGGATTGAAGGGAGACTGTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS-3UTR CAA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGGATTTCTTCTTCACATaGTCTGCTGCTGACATACAG +
Preference number: 5 (lower is better)
Translates to: ARPSMENTASTRVYAERGDFFFT*SAADIQ
Trigger: CTGTATGTCAGCAGCAGACAATGTGAAGAAGAAATC...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp GCGAGACCTTCTATGGAGAACACAGCCAGTACCAGAGTTTATGCAGAGCGTGGGTCCTCACTTTGTTTATaGTTTCCTTTGCTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: ARPSMENTASTRVYAERGSSLCL*FPLLCS
Trigger: GCTGCACAGCAAAGGAAACAATAAACAAAGTGAGGA...CCCACGCTCTGCATAAACTCTGGTACTGGCTGTGTTCTCCATAGAAGGTCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp AGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAGTCTCTGTTTCACCTTGGGCGTaGGCTCCTTGCTTTGTACCC +
Preference number: 5 (lower is better)
Translates to: RLVGEIPTIVWMSSEQVSVSPWA*APCFVP
Trigger: GGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAAC...AGAGACTTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp TTCACGGTTAGCACCAGGGGACTCCCTATCCCTGACTCAGCTCATCACTCAACACATGAAATTCACAGATaGGTTGGGGAGATTCCTACT +
Preference number: 5 (lower is better)
Translates to: FTVSTRGLPIPDSAHHSTHEIHR*VGEIPT
Trigger: AGTAGGAATCTCCCCAACCAATCTGTGAATTTCATG...TGTTGAGTGATGAGCTGAGTCAGGGATAGGGAGTCCCCTGGTGCTAACCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGGCTTAGGAGAACTTaGATCAGGCTCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLRLRRT*IRLWYQ
Trigger: CTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCG...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp CAAATCCTGCAGAGGCCAAACAGGCTCAGAAGGAACTGGCAAGAGGGGATCACTTTCATTAATTCCACATaGGGCACATGGCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: QILQRPNRLRRNWQEGITFINST*GTWPKL
Trigger: CAGTTTTGGCCATGTGCCCAATGTGGAATTAATGAA...AGTGATCCCCTCTTGCCAGTTCCTTCTGAGCCTGTTTGGCCTCTGCAGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTCGCCAGATACTGCACATATaGCTGCAGGAAAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: GRKTQPPITNGKWKGVLRQILHI*LQESQA
Trigger: AGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCTG...GCGAAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GGACATATTCCACTGGCAGATCATGGATGGGAACCTGACAGGAAACATCCGGGATATACAGTGATGCATTaGAGGACAGGCCTATTCCAG +
Preference number: 5 (lower is better)
Translates to: GHIPLADHGWEPDRKHPGYTVMH*RTGLFQ
Trigger: CTGGAATAGGCCTGTCCTCAAATGCATCACTGTATA...TCCCGGATGTTTCCTGTCAGGTTCCCATCCATGATCTGCCAGTGGAATATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp GCTCAGGACAAGTGGACAGGTAGGACCCAAATGTTGCCATTGCGATaGACTTCATTAATTCCACATTGGGCACATGGCCAAAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: AQDKWTGRTQMLPLR*TSLIPHWAHGQNCS
Trigger: ACTGCAGTTTTGGCCATGTGCCCAATGTGGAATTAATGAAGTTCATCGCAATGGCAACATTTGGGTCCTACCTGTCCACTTGTCCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS TCA 90 bp CTGCAAAGGAATGTTATGGTTCAGCTTTTCCTCTATCCGTCTGGGTaGGAGGTCATCAGGAGTAAGAGAAGGGAGAAGTGTCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: LQRNVMVQLFLYPSG*EVIRSKRREKCRDF
Trigger: GAAGTCTCGACACTTCTCCCTTCTCTTACTCCTGATGACCTCTCACCCAGACGGATAGAGGAAAAGCTGAACCATAACATTCCTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 90 bp GGTGAATCAAAGTGGCAGTTTTCTCAGAGAAGCTGCTGTCAAGTGTaGACAGCACACAGGCTACCCAGGAGGCTGAAGTTTCTGTGTAAA +
Preference number: 5 (lower is better)
Translates to: GESKWQFSQRSCCQV*TAHRLPRRLKFLCK
Trigger: TTTACACAGAAACTTCAGCCTCCTGGGTAGCCTGTGTGCTGTTCACACTTGACAGCAGCTTCTCTGAGAAAACTGCCACTTTGATTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp GGACTCTGCTTCGATATGGAGGAGATCCCAGGATGTGCTGAGAGATaGATTCTCCTGGAGATATCAGAAACGTTTGTCTACAGACTTGCT +
Preference number: 5 (lower is better)
Translates to: GLCFDMEEIPGCAER*ILLEISETFVYRLA
Trigger: AGCAAGTCTGTAGACAAACGTTTCTGATATCTCCAGGAGAATGCATCTCTCAGCACATCCTGGGATCTCCTCCATATCGAAGCAGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 90 bp ATACTAGGAAAGCACTTTAAACTAGGGCAGAGGGCTGGCAATCCCTaGCCTGGGATCCAGGTATGCACCAATTTTGTTGCTGTATGTTTC +
Preference number: 5 (lower is better)
Translates to: ILGKHFKLGQRAGNP*PGIQVCTNFVAVCF
Trigger: GAAACATACAGCAACAAAATTGGTGCATACCTGGATCCCAGGGCAGGGATTGCCAGCCCTCTGCCCTAGTTTAAAGTGCTTTCCTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 90 bp TATGCTGTGCACCTCTTCTTTCTTCTCAAGTCTTCTTCAGAATGGTaGTCTTCCTTTCTTCTCAGCCCCACCTTACCCTGCATATGCCAC +
Preference number: 5 (lower is better)
Translates to: YAVHLFFLLKSSSEW*SSFLLSPTLPCICH
Trigger: GTGGCATATGCAGGGTAAGGTGGGGCTGAGAAGAAAGGAAGACCACCATTCTGAAGAAGACTTGAGAAGAAAGAAGAGGTGCACAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTAAGGCAGGTGGATCACTaGAGGTCAGAAGTTCGAGGG +
Preference number: 5 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLRQVDH*RSEVRG
Trigger: CCCTCGAACTTCTGACCTCAAGTGATCCACCTGCCT...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTGACACAGTAGAGGGCTaGAGTTGGCTACGTTCATAC +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLDTVEG*SWLRSY
Trigger: GTATGAACGTAGCCAACTCAAGCCCTCTACTGTGTC...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS-3UTR CAA 90 bp GAAGGTAGGAAGACCCAACCTCCAATTACAAATGGTAAGTGGAAGGGGGTACTTTTGATGGGCAGGAAGTaGAGTGTTCCTTGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: EGRKTQPPITNGKWKGVLLMGRK*SVPCKG
Trigger: ACCCTTGCAAGGAACACTCAACTTCCTGCCCATCAA...AAGTACCCCCTTCCACTTACCATTTGTAATTGGAGGTTGGGTCTTCCTACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 90 bp AGGAGGGATAAGAGGATGAGGCAGGCTAGTGGCATGCAGTCATGGTaGTCAGACCCAGAATCTGTTTTATATGGAATCATTTTGCAAGGG +
Preference number: 5 (lower is better)
Translates to: RRDKRMRQASGMQSW*SDPESVLYGIILQG
Trigger: CCCTTGCAAAATGATTCCATATAAAACAGATTCTGGGTCTGATCACCATGACTGCATGCCACTAGCCTGCCTCATCCTCTTATCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 90 bp GAAACATGCAGCTTCCATGGGTCAGTAGGACACTTAACTTATGGATaGTCGCACACCCAAATACAGTGCCACACATGGAACAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: ETCSFHGSVGHLTYG*SHTQIQCHTWNSFW
Trigger: CCAGAAACTGTTCCATGTGTGGCACTGTATTTGGGTGTGCGATCATCCATAAGTTAAGTGTCCTACTGACCCATGGAAGCTGCATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 90 bp TTATCATGTTCCCTTACCATGACTAGAAATCCCAAAGCAGTCCTGTaGCTGCCTGTCTGGAGGAACAGCCAATCAGAAGGCAATTCTACT +
Preference number: 5 (lower is better)
Translates to: LSCSLTMTRNPKAVL*LPVWRNSQSEGNST
Trigger: AGTAGAATTGCCTTCTGATTGGCTGTTCCTCCAGACAGGCAGCCACAGGACTGCTTTGGGATTTCTAGTCATGGTAAGGGAACATGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 90 bp GGCAGAAACATGCAGCTTCCATGGGTCAGTAGGACACTTAACTTATaGATGATCGCACACCCAAATACAGTGCCACACATGGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: GRNMQLPWVSRTLNL*MIAHPNTVPHMEQF
Trigger: AAACTGTTCCATGTGTGGCACTGTATTTGGGTGTGCGATCATCCATAAGTTAAGTGTCCTACTGACCCATGGAAGCTGCATGTTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 90 bp CTTTATGCTGTGCACCTCTTCTTTCTTCTCAAGTCTTCTTCAGAATaGTGGTCTTCCTTTCTTCTCAGCCCCACCTTACCCTGCATATGC +
Preference number: 5 (lower is better)
Translates to: LYAVHLFFLLKSSSE*WSSFLLSPTLPCIC
Trigger: GCATATGCAGGGTAAGGTGGGGCTGAGAAGAAAGGAAGACCACCATTCTGAAGAAGACTTGAGAAGAAAGAAGAGGTGCACAGCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS GCA 90 bp CTTGGCCATTCTCCAAAAGGAGTGTCTTGTGATAGCCTCCTTGAGTaGTGGATAAGCCCTGTAATTATCTGTGTGGTCAGCATTATAACC +
Preference number: 5 (lower is better)
Translates to: LGHSPKGVSCDSLLE*WISPVIICVVSIIT
Trigger: GGTTATAATGCTGACCACACAGATAATTACAGGGCTTATCCAGCACTCAAGGAGGCTATCACAAGACACTCCTTTTGGAGAATGGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 90 bp GGCCATTCTCCAAAAGGAGTGTCTTGTGATAGCCTCCTTGAGTGCTaGATAAGCCCTGTAATTATCTGTGTGGTCAGCATTATAACCAAC +
Preference number: 5 (lower is better)
Translates to: GHSPKGVSCDSLLEC*ISPVIICVVSIITN
Trigger: GTTGGTTATAATGCTGACCACACAGATAATTACAGGGCTTATCCAGCACTCAAGGAGGCTATCACAAGACACTCCTTTTGGAGAATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS TCA 90 bp AAACAGACATCCAGTGGTCAGAATCAAAGAGATTTACAGGAGCAGTaGAAAAGGCAGGTGTCCAATCAACACCAACTGACCCGAAGTCTA +
Preference number: 5 (lower is better)
Translates to: KQTSSGQNQRDLQEQ*KRQVSNQHQLTRSL
Trigger: TAGACTTCGGGTCAGTTGGTGTTGATTGGACACCTGCCTTTTTCACTGCTCCTGTAAATCTCTTTGATTCTGACCACTGGATGTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 90 bp TCGATATGGAGGAGATCCCAGGATGTGCTGAGAGATGCATTCTCCTaGAGATATCAGAAACGTTTGTCTACAGACTTGCTGAGAATGTTA +
Preference number: 5 (lower is better)
Translates to: SIWRRSQDVLRDAFS*RYQKRLSTDLLRML
Trigger: TAACATTCTCAGCAAGTCTGTAGACAAACGTTTCTGATATCTCCAGGAGAATGCATCTCTCAGCACATCCTGGGATCTCCTCCATATCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS-3UTR CAA 90 bp CCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTATGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: PTYVYSLLFTIPFHIQILCGLHS*VQMTEE
Trigger: TTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACA...TAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS CCA 90 bp AATCCTGGCTCTGTCACTTACTGTGGCCTTGGGCAAGTATTTAACTaGCCTGTGCTTCAGTTTCTTCACCCATATGATAAGGACATTAAT +
Preference number: 5 (lower is better)
Translates to: NPGSVTYCGLGQVFN*PVLQFLHPYDKDIN
Trigger: ATTAATGTCCTTATCATATGGGTGAAGAAACTGAAGCACAGGCCAGTTAAATACTTGCCCAAGGCCACAGTAAGTGACAGAGCCAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp GCTGGTCCCTCTGTCAGAAAAGTCCATTTCCCCTTCTTTGAATGGTTAACCTCAATGTTAATATCCCCTTaGGAAAAAGGTCACAGATGC +
Preference number: 5 (lower is better)
Translates to: AGPSVRKVHFPFFEWLTSMLISP*EKGHRC
Trigger: GCATCTGTGACCTTTTTCCAAAGGGGATATTAACAT...TGAGGTTAACCATTCAAAGAAGGGGAAATGGACTTTTCTGACAGAGGGACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAAAGTTCAAGACCAGCCTaGGCCTCCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQSSRPA*ASQSVG
Trigger: CCCAACACTTTGGGAGGCCAAGGCTGGTCTTGAACT...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS TCA 90 bp GAACTGCAGTGGGGAGGAGTTATATGTAATGGCATGATATGTATATaGCATAACTGCAGTTATACGTATCACGAGGGGGAGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ELQWGGVICNGMICI*HNCSYTYHEGERKS
Trigger: TGACTTTCTCTCCCCCTCGTGATACGTATAACTGCAGTTATGTCATATACATATCATGCCATTACATATAACTCCTCCCCACTGCAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQCGLHS*VQMTEE
Trigger: TTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACA...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp ACATTCATGGCCTTTCATAACCAGCTCCCACTTATGTCTACAGTCTCCTCTTTAGAAAGGTTAAGTAACTaGCTCAAGGACACACAACCA +
Preference number: 5 (lower is better)
Translates to: TFMAFHNQLPLMSTVSSLERLSN*LKDTQP
Trigger: TGGTTGTGTGTCCTTGAGCAAGTTACTTAACCTTTC...TAAAGAGGAGACTGTAGACATAAGTGGGAGCTGGTTATGAAAGGCCATGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCAGATGGGAAGATCGCTaGAGCCCAGGAGTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: HEHGISFQFLESTSISLIRWEDR*SPGVRD
Trigger: GTCTCTAACTCCTGGGCTCAAGCGATCTTCCCATCT...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp CCCACTTATGTCTACAGTCTCCTCTTTACCATCCCTTTCCACATTCAAATTTTAACCATGTATTTGCTTTaGCTGGTCCCTCTGTCAGAA +
Preference number: 5 (lower is better)
Translates to: PTYVYSLLFTIPFHIQILTMYLL*LVPLSE
Trigger: TTCTGACAGAGGGACCAGCAAAAGCAAATACATGGT...TAAAATTTGAATGTGGAAAGGGATGGTAAAGAGGAGACTGTAGACATAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp ATTCACAGATTGGTTGGGGAGATTCCTACTATTGTGTGGATGTCCTCAGAACAAACTTGGATCACTAGATaGAGGGTGATATTTTTCACC +
Preference number: 5 (lower is better)
Translates to: IHRLVGEIPTIVWMSSEQTWITR*RVIFFT
Trigger: GGTGAAAAATATCACCCTCAATCTAGTGATCCAAGT...TTGTTCTGAGGACATCCACACAATAGTAGGAATCTCCCCAACCAATCTGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470139.1
CDS TCA 90 bp GCCTTATTATGCTTTATTTTTATACACGAACTTCTAAAGCTGCTCTaGTCCTTAGATGTTGTTAATGCTCAGCGAGAAGCCAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: ALLCFIFIHELLKLL*SLDVVNAQREAKIP
Trigger: GGGGATTTTGGCTTCTCGCTGAGCATTAACAACATCTAAGGATCAGAGCAGCTTTAGAAGTTCGTGTATAAAAATAAAGCATAATAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS-3UTR CAA 90 bp TATGATATAAGCAATGTTAATATCCCCTTTGGAAAAAGGTCACAGATGCACAGACATAGTACCATGTATTaGCTTTTGCTGGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: YDISNVNIPFGKRSQMHRHSTMY*LLLVPL
Trigger: CAGAGGGACCAGCAAAAGCAAATACATGGTACTATG...TCTGTGCATCTGTGACCTTTTTCCAAAGGGGATATTAACATTGCTTATATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS-3UTR CAA 90 bp ATGAATATCCAGTCTTCCCAGAACCATTTATTGAAGAGACTGTTCTTTCCCCAAGTGATTCCTCCAGTTTaGTTTGTTTTGCTCAGAATA +
Preference number: 5 (lower is better)
Translates to: MNIQSSQNHLLKRLFFPQVIPPV*FVLLRI
Trigger: TATTCTGAGCAAAACAAACAAAACTGGAGGAATCAC...TTGGGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGAAGACTGGATATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATCCCAGAACCATTTATaGAAGAGACTGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQSQNHL*KRLFFP
Trigger: GGGAAAGAACAGTCTCTTCAATAAATGGTTCTGGGA...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAACCTATTTGTCCATTTTaGCTTTGCACGCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQPICPF*LCTLVL
Trigger: AAGCACAAGCGTGCAAAGCAAAAATGGACAAATAGG...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp TTCTTCCAATCCATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATCTCCCATTCTGTGGTaGTTTCCTCACTTTGTTTAT +
Preference number: 5 (lower is better)
Translates to: FFQSMNMEYHSNFWSPLQSPILW*FPHFVY
Trigger: ATAAACAAAGTGAGGAAACAACCACAGAATGGGAGA...TTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATGGATTGGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS-3UTR CAA 90 bp CATGAACATGGAATATCATTCCAATTTTTGGAGTCCACTTCAATTTCTCTCATCTGTCAGATGGGTGGTTaGCAAATATTTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: HEHGISFQFLESTSISLICQMGG*QIFSPI
Trigger: AATGGGAGAAAATATTTGCAAACCACCCATCTGACA...GATGAGAGAAATTGAAGTGGACTCCAAAAATTGGAATGATATTCCATGTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406439.7
CDS TCA 72 bp CCGCGCCGGCCCGGGCCAGTGAGGGTGTTCCACTCTTaGCCCCTGACCTCGCTACCTCGGCACCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PRRPGPVRVFHS*PLTSLPRHPAG
Trigger: TCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS TCA 72 bp TTCACAGCTTGTGGGGGCCTCTCGGCTCCCAGACCCTaGCTCAGGGCGATGGCGCCGCTGCCCGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: FTACGGLSAPRP*LRAMAPLPVRG
Trigger: CCCCCTGACGGGCAGCGGCGCCATCGCCCTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp GCTCCTCACGGGCTCCCGGGGGCGACACATCCAAGGATTCACAGCTaGTGGGGGCCTCTCGGCTCCCAGACCCTGACTCAGGGCGATGGC +
Preference number: 6 (lower is better)
Translates to: APHGLPGATHPRIHS*WGPLGSQTLTQGDG
Trigger: GCCATCGCCCTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGGATGTGTCGCCCCCGGGAGCCCGTGAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp CAGCTGAGCCAGCCGTGCTCGTGCCATGCCCACCTCTaGAGCCAGTGGTGGGAACAGAGGAGCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QLSQPCSCHAHL*SQWWEQRSRSR
Trigger: CCTGGACCGGCTCCTCTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp TCCAGCCAGCCGCACCAGCTGAGCCAGCCGTGCTCGTaGCATGCCCACCTCTGCAGCCAGTGGTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: SSQPHQLSQPCS*HAHLCSQWWEQ
Trigger: CTGTTCCCACCACTGGCTGCAGAGGTGGGCATGGCACGAGCACGGCTGGCTCAGCTGGTGCGGCTGGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp TGGGTGCTGCCGACTGCTTGCTCCTTCGGGATCCCATaGACCCCCAGCAGTGGCCCCTCGGCACCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: WVLPTACSFGIP*TPSSGPSAPLA
Trigger: TGCCAGAGGTGCCGAGGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCAGTCGGCAGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562955.2
CDS GCA 72 bp CCACTGCACCAGGCGAACCAGCGCTCGGCCCAATGCTaGCCCCAGGTCTGGAGCCCAGTTGTAGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: PLHQANQRSAQC*PQVWSPVVGQQ
Trigger: CTGCTGACCTACAACTGGGCTCCAGACCTGGGGGCAGCATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp CTGCCACTGCACCAGGCGAACCAGCGCTCGGCCCAATaGTGCCCCCAGGTCTGGAGCCCAGTTGTAGGTCAG +
Preference number: 6 (lower is better)
Translates to: LPLHQANQRSAQ*CPQVWSPVVGQ
Trigger: CTGACCTACAACTGGGCTCCAGACCTGGGGGCAGCATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CTCCCGGGGGCGACACATCCAAGGATTCACAGCTTGTaGGGGCCTCTCGGCTCCCAGACCCTGACTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LPGATHPRIHSL*GPLGSQTLTQG
Trigger: GCCCTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGGATGTGTCGCCCCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp GGGCTCCCGGGGGCGACACATCCAAGGATTCACAGCTaGTGGGGGCCTCTCGGCTCCCAGACCCTGACTCAG +
Preference number: 6 (lower is better)
Translates to: GLPGATHPRIHS*WGPLGSQTLTQ
Trigger: CTGAGTCAGGGTCTGGGAGCCGAGAGGCCCCCACAAGCTGTGAATCCTTGGATGTGTCGCCCCCGGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp CCCAGGCAGCTGTGCAGCAGGCACAGCACCATGTCGTaGGCAGGACAGGACCCCTCGGCGAAAGGGACACCC +
Preference number: 6 (lower is better)
Translates to: PRQLCSRHSTMS*AGQDPSAKGTP
Trigger: GGGTGTCCCTTTCGCCGAGGGGTCCTGTCCTGCCAACGACATGGTGCTGTGCCTGCTGCACAGCTGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS TCA 72 bp CAGGGTGGTGGGCCAGGAAGTGTCGCAGAAAGGTGGTaGGGTGGTAGCCGTGCCGCAGCACCAGATGGGCAC +
Preference number: 6 (lower is better)
Translates to: QGGGPGSVAERW*GGSRAAAPDGH
Trigger: GTGCCCATCTGGTGCTGCGGCACGGCTACCACCTCACCACCTTTCTGCGACACTTCCTGGCCCACCACCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AGGCAGGTAGGCAGGCTGCACACAGGTACTGAGCTGTaGTGCCCACGTAGCCGCACGGAGCACGTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: RQVGRLHTGTEL*CPRSRTEHVRC
Trigger: GCACCTCACGTGCTCCGTGCGGCTACGTGGGCAGCACAGCTCAGTACCTGTGTGCAGCCTGCCTACCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp GGTGGAGCGTCCAGGAGAACTATGGATATGGGCAGCTaGGCGGTGCAGGGCAGGACTCTGTGGGATGCCCCC +
Preference number: 6 (lower is better)
Translates to: GGASRRTMDMGS*AVQGRTLWDAP
Trigger: GGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 72 bp ACTCAGTCGGCCCTGCTCACGGCTCAGCGGGGGACTTaGACTCCGGATGAGGGTCTCCACTTCCATGGTCGG +
Preference number: 6 (lower is better)
Translates to: TQSALLTAQRGT*TPDEGLHFHGR
Trigger: CCGACCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGCCGTGAGCAGGGCCGACTGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CACACTGAGGTCCCTCAAGGGAACTCGGCCTCCAACTaGGGGGCCCTCCAGACTGGAAAGCACCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: HTEVPQGNSASN*GALQTGKHLAQ
Trigger: CTGGGCCAGGTGCTTTCCAGTCTGGAGGGCCCCCCAGTTGGAGGCCGAGTTCCCTTGAGGGACCTCAGTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp CTGTGCCAAGCCCAGGCCGCTGAAGAAGGCTCCCCATaGGACCCACCTGGCTGTTGGCCAGCTGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: LCQAQAAEEGSP*DPPGCWPAATK
Trigger: CTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTCCCATGGGGAGCCTTCTTCAGCGGCCTGGGCTTGGCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CCAGGCAGCTGTGCAGCAGGCACAGCACCATGTCGTTaGCAGGACAGGACCCCTCGGCGAAAGGGACACCCT +
Preference number: 6 (lower is better)
Translates to: PGSCAAGTAPCR*QDRTPRRKGHP
Trigger: AGGGTGTCCCTTTCGCCGAGGGGTCCTGTCCTGCCAACGACATGGTGCTGTGCCTGCTGCACAGCTGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634258.3
CDS CAA 72 bp ACGAGGACCCGAGGCTTCCTCAGAGTAGATGGGCTCTaGGCTTCGGGACAGAGCGAGGGAAGGGGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: TRTRGFLRVDGL*ASGQSEGRGQR
Trigger: GCGCTGCCCCCTTCCCTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAGCCTCGGGTCCTCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000470897.2
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp CTGAGCTGTGCTGCCCACGTAGCCGCACGGAGCACGTaGGGTGCAGGAAGAGCGGTGGCAGGTCATGAAGGA +
Preference number: 6 (lower is better)
Translates to: LSCAAHVAARST*GAGRAVAGHEG
Trigger: TCCTTCATGACCTGCCACCGCTCTTCCTGCACCTCACGTGCTCCGTGCGGCTACGTGGGCAGCACAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS TCA 72 bp TGTTGTCCGGCGCTTTTGTCTCTGGGCTCCAGAATCTaGGCCTGGCGCCCGCTCAGCTCCACCAGGAGTCCG +
Preference number: 6 (lower is better)
Translates to: CCPALLSLGSRI*AWRPLSSTRSP
Trigger: CGGACTCCTGGTGGAGCTGAGCGGGCGCCAGGCTCAGATTCTGGAGCCCAGAGACAAAAGCGCCGGACAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp CCTGCTCACGGCTCAGCGGGGGACTTGCACTCCGGATaGGGGTCTCCACTTCCATGGTCGGCAGCAGGAATG +
Preference number: 6 (lower is better)
Translates to: PAHGSAGDLHSG*GSPLPWSAAGM
Trigger: CATTCCTGCTGCCGACCATGGAAGTGGAGACCCTCATCCGGAGTGCAAGTCCCCCGCTGAGCCGTGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp GTGCTGACCAAGTCGGCTGGCACCTCCTTCTCAGTGTaGTTCTTCCGGCGCAAGGCCAGGGCAGGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VLTKSAGTSFSV*FFRRKARAGLL
Trigger: CAGCAACCCTGCCCTGGCCTTGCGCCGGAAGAAGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 72 bp CGTCCAGGAGAACTATGGATATGGGCAGCTGCGCGGTaGAGGGCAGGACTCTGTGGGATGCCCCCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: RPGELWIWAAAR*RAGLCGMPPLR
Trigger: CCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 72 bp CGCCCTGAGCTCCCATCACCTCCTGGCTCGAAGCGCTaGATGGCTTTGGCAGCCTGCTGTGTTGGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RPELPSPPGSKR*MALAACCVGLL
Trigger: GAGGAGACCAACACAGCAGGCTGCCAAAGCCATGCAGCGCTTCGAGCCAGGAGGTGATGGGAGCTCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CGAAGGCAGGTGGAGCGTCCAGGAGAACTATGGATATaGGCAGCTGCGCGGTGCAGGGCAGGACTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: RRQVERPGELWI*AAARCRAGLCG
Trigger: CCCACAGAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CAA 90 bp CTGGGGGCCCATGCAGCCAGGCAGCTGGGTCGAAGAGCATGGCTGTaGCACAGTAATGCACCAGGCGGGATGACTGCTTCAGGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LGAHAARQLGRRAWL*HSNAPGGMTASGSP
Trigger: TGGAGACCCTGAAGCAGTCATCCCGCCTGGTGCATTACTGTGCAACAGCCATGCTCTTCGACCCAGCTGCCTGGCTGCATGGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GCTGTGGAGGTGCTGGCCCAGGTGGAGTCCGCAATGTaGAGGGGGCCTTCTCACCAAGGGTGTCATTGGGAC +
Preference number: 6 (lower is better)
Translates to: AVEVLAQVESAM*RGPSHQGCHWD
Trigger: GTCCCAATGACACCCTTGGTGAGAAGGCCCCCTTCACATTGCGGACTCCACCTGGGCCAGCACCTCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AGGCAGAAGATGAGATGGGCTCGTGCATTCTGCCACTaGACCAGGCGAACCAGCGCTCGGCCCAATGCTGCC +
Preference number: 6 (lower is better)
Translates to: RQKMRWARAFCH*TRRTSARPNAA
Trigger: GGCAGCATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AGGGAGAACGAGGACCCGAGGCTTCCTCAGAGTAGATaGGCTCTTGGCTTCGGGACAGAGCGAGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RENEDPRLPQSR*ALGFGTERGKG
Trigger: CCCCTTCCCTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAGCCTCGGGTCCTCGTTCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470897.2
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GTGCCATGCCGACACCAGGGCATACTCGTTGTGTTCTaGGCCCCCTGGCCGGGCCATTCGCAATGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: VPCRHQGILVVF*APWPGHSQWLH
Trigger: ATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGTGTCGGCATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GTTTGGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATaGATATGGGCAGCTGCGCGGTGCAGGGCAGGACTC +
Preference number: 6 (lower is better)
Translates to: VWRRQVERPGEL*IWAAARCRAGL
Trigger: GAGTCCTGCCCTGCACCGCGCAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 72 bp CGCATGTCAGCAGTGAGCCTGGGGAAGAGCTCTCGCTaGCTGGTGAGCACCACGAAGAACTGTAGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RMSAVSLGKSSR*LVSTTKNCSLG
Trigger: CCCCAGGCTACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGCTCTTCCCCAGGCTCACTGCTGACATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640484.1
CDS CAA 72 bp CCAGAACTGTGCCATGCCGACACCAGGGCATACTCGTaGTGTTCTGGGCCCCCTGGCCGGGCCATTCGCAAT +
Preference number: 6 (lower is better)
Translates to: PELCHADTRAYS*CSGPPGRAIRN
Trigger: ATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGTGTCGGCATGGCACAGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp GATACATGCCGAGGCTTCCTCAGAGTAGATGGGCTCTaGGCTTCGGGACAGAGCGAGGGAAGGGGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: DTCRGFLRVDGL*ASGQSEGRGQR
Trigger: GCGCTGCCCCCTTCCCTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAGCCTCGGCATGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp CTAGGTGGTCTGAGTCCACACTGCCCTGACTGGACATaGGACTTAATCCCCGGCTGGGCCCAGGCTGACTCC +
Preference number: 6 (lower is better)
Translates to: LGGLSPHCPDWT*DLIPGWAQADS
Trigger: GGAGTCAGCCTGGGCCCAGCCGGGGATTAAGTCTCATGTCCAGTCAGGGCAGTGTGGACTCAGACCACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638769.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp CTGTACATAGTGAAGCTGGCAGCAGCTGAAGCTCGATaGTGGCATCGGCCAGGGCCTGGCGAGCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LYIVKLAAAEAR*WHRPGPGELLL
Trigger: GAGGAGCAGCTCGCCAGGCCCTGGCCGATGCCATCATCGAGCTTCAGCTGCTGCCAGCTTCACTATGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GCACAGGACCAAGTACGGAGCTGGGGCGGGCAGCCGTaGTATCCCTTAGGGCCTCGTCAAAGGGGAATGTGT +
Preference number: 6 (lower is better)
Translates to: AQDQVRSWGGQP*YPLGPRQRGMC
Trigger: ACACATTCCCCTTTGACGAGGCCCTAAGGGATATCACGGCTGCCCGCCCCAGCTCCGTACTTGGTCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp TCTCTGGCCCAGGGTCTGGAATGCCAGGGACACGGGTaGTCTGAAACTCAGGCTCGCTTAGGTCCTCGGTCT +
Preference number: 6 (lower is better)
Translates to: SLAQGLECQGHG*SETQARLGPRS
Trigger: AGACCGAGGACCTAAGCGAGCCTGAGTTTCAGAGCACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp CAGGGCAGGACTCTGTGGGATGCCCCCTCTTCGGAGTaGCCCCACCATCTCATCTTCCAACAACCAGCGGAT +
Preference number: 6 (lower is better)
Translates to: QGRTLWDAPSSE*PHHLIFQQPAD
Trigger: ATCCGCTGGTTGTTGGAAGATGAGATGGTGGGGGCACTCCGAAGAGGGGGCATCCCACAGAGTCCTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 72 bp GTGGTGCCCGCTGACGGGAGTGGAAGGGAGTCTCACTaGGCCACAGATCTTCTTCACTCTCGGCCACCAGAA +
Preference number: 6 (lower is better)
Translates to: VVPADGSGRESH*ATDLLHSRPPE
Trigger: TTCTGGTGGCCGAGAGTGAAGAAGATCTGTGGCGCAGTGAGACTCCCTTCCACTCCCGTCAGCGGGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp TCCACAACAACCGGGCAGCGGATGACCTGGGTCAGTTaGTCAAATTCCTCCTCTCGCAGTGGGTCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: STTTGQRMTWVS*SNSSSRSGSGG
Trigger: GCCCCCAGACCCACTGCGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTGTTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AAGGGGGCAGCGCATCCCCTTTCCATGGCCGGTCACTaGAGGATGTCTCTAGGAGCCTGGGAAAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: KGAAHPLSMAGH*RMSLGAWERAA
Trigger: TGCTGCTCTTTCCCAGGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGAAAGGGGATGCGCTGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 72 bp GAGGGTGCAGGCCCTGGCTTCTACTTACCGTGCATGTaGATACACTTCCACACGGTCCTGCAGGACCCGGAC +
Preference number: 6 (lower is better)
Translates to: EGAGPGFYLPCM*IHFHTVLQDPD
Trigger: GTCCGGGTCCTGCAGGACCGTGTGGAAGTGTATGCACATGCACGGTAAGTAGAAGCCAGGGCCTGCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp GTTGTGTTCTGGGCCCCCTGGCCGGGCCATTCGCAATaGCTTCATGTGGTAAGAGCTGGCGTGATCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VVFWAPWPGHSQ*LHVVRAGVISH
Trigger: GTGGCTGATCACGCCAGCTCTTACCACATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CGCATGTCAGCAGTGAGCCTGGGGAAGAGCTCTCGCTaGCTGGTGAGCACCACGAAGAACTGTAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: RMSAVSLGKSSR*LVSTTKNCSRR
Trigger: TCTGCGGCTACAGTTCTTCGTGGTGCTCACCAGCCAGCGAGAGCTCTTCCCCAGGCTCACTGCTGACATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AAATGCCCGGTGGTAGACAGTCAGACCCAGGTTGCCTaGCTCCGGCTCAGGACAAGTGGACAGGTAGGACCC +
Preference number: 6 (lower is better)
Translates to: KCPVVDSQTQVA*LRLRTSGQVGP
Trigger: GGGTCCTACCTGTCCACTTGTCCTGAGCCGGAGCCAGGCAACCTGGGTCTGACTGTCTACCACCGGGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp TGCTTGCTCCTTCGGGATCCCATGAACCCCCAGCAGTaGCCCCTCGGCACCTCTGGCAAGCAAGAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: CLLLRDPMNPQQ*PLGTSGKQEEE
Trigger: TTCTTCCTCTTGCTTGCCAGAGGTGCCGAGGGGCCACTGCTGGGGGTTCATGGGATCCCGAAGGAGCAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562955.2
CDS CAA 72 bp CCTAGCCCTTTTCGTTTCACCTTGGGCGTTGGCTCCTaGCTTTGTACCCGGTGGGGGAAACGCAGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: PSPFRFTLGVGS*LCTRWGKRSRR
Trigger: CCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGGGCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CAA 72 bp GTCCACAACAACCGGGCAGCGGATGACCTGGGTCAGTaGCTCAAATTCCTCCTCTCGCAGTGGGTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: VHNNRAADDLGQ*LKFLLSQWVWG
Trigger: CCCCCAGACCCACTGCGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTGTTGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp AGTGGGAGTGATACATGCCGAGGCTTCCTCAGAGTAGATGGGCTCTaGGCTTCGGGACAGAGCGAGGGAAGGGGGCAGCGCATCCCCTTT +
Preference number: 6 (lower is better)
Translates to: SGSDTCRGFLRVDGL*ASGQSEGRGQRIPF
Trigger: AAAGGGGATGCGCTGCCCCCTTCCCTCGCTCTGTCCCGAAGCCAAGAGCCCATCTACTCTGAGGAAGCCTCGGCATGTATCACTCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp CACTGTAGCCCTCTCGAAGCCGTACGGACACAGTGCTaGCCAAGTCGGCTGGCACCTCCTTCTCAGTGTGCT +
Preference number: 6 (lower is better)
Translates to: HCSPLEAVRTQC*PSRLAPPSQCA
Trigger: AGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTACGGCTTCGAGAGGGCTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS TCA 72 bp GCTCGAATCCCTGATGCCCACAGACCTTGCAGACAGTaGAGGGCCTATGGACCCCAGACTCAGCTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: ARIPDAHRPCRQ*RAYGPQTQLAP
Trigger: TGGGGCAAGCTGAGTCTGGGGTCCATAGGCCCTTCACTGTCTGCAAGGTCTGTGGGCATCAGGGATTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CTAGCCCTTTTCGTTTCACCTTGGGCGTTGGCTCCTTaGTTTGTACCCGGTGGGGGAAACGCAGCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: LALFVSPWALAP*FVPGGGNAAAG
Trigger: TCCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp GTGTGGGGAGCTCCAATGTCCCTTGGTAAATGTGATTaGGGCCAAAGTGGGGTCCGTCAGGGTGGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: VWGAPMSLGKCD*GQSGVRQGGGP
Trigger: TGGCCCACCACCCTGACGGACCCCACTTTGGCCGCAATCACATTTACCAAGGGACATTGGAGCTCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp GGGGACTGGTCTTCTGCCTGGCTCTGGGGATCGTACTaGTGCTGCAGCATGGTGGCCACCTTATCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: GDWSSAWLWGSY*CCSMVATLSSK
Trigger: CTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 72 bp AGGCTCCCCATGGGACCCACCTGGCTGTTGGCCAGCTaGCACAAAGAAGAAGCCACTGTCAGGGTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: RLPMGPTWLLAS*HKEEATVRVFK
Trigger: CTTGAAGACCCTGACAGTGGCTTCTTCTTTGTGGCAGCTGGCCAACAGCCAGGTGGGTCCCATGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AGGCTCCGTGCATGTGCATACACTTCCACACGGTCCTaGAGGACCCGGACAATGAGCCAGAAGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RLRACAYTSTRS*RTRTMSQKSGR
Trigger: CCTGCCTGACTTCTGGCTCATTGTCCGGGTCCTGCAGGACCGTGTGGAAGTGTATGCACATGCACGGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000649403.1
CDS GCA 72 bp GCTCTCATCAGCAGCATAATCATCACTGGGCAGTGGTaGCCGCTGACGGGAGTGGAAGGGAGTCTCACTGCG +
Preference number: 6 (lower is better)
Translates to: ALISSIIITGQW*PLTGVEGSLTA
Trigger: CGCAGTGAGACTCCCTTCCACTCCCGTCAGCGGGCACCACTGCCCAGTGATGATTATGCTGCTGATGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp ACAGGAGAAATGGCCAGGGACAAACTGCATTGTGGCTaGCAGGTACCCACGGGGCGCACAGCTCTCATCAGC +
Preference number: 6 (lower is better)
Translates to: TGEMARDKLHCG*QVPTGRTALIS
Trigger: GCTGATGAGAGCTGTGCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTGGCCATTTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AAGCTCGATGATGGCATCGGCCAGGGCCTGGCGAGCTaGTCCTCGGAGTTTCTCCTCCAGCTGCACAATACT +
Preference number: 6 (lower is better)
Translates to: KLDDGIGQGLAS*SSEFLLQLHNT
Trigger: AGTATTGTGCAGCTGGAGGAGAAACTCCGAGGAGCAGCTCGCCAGGCCCTGGCCGATGCCATCATCGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp CTGAGTAGGCAGAAGATGAGATGGGCTCGTGCATTCTaGCACTGCACCAGGCGAACCAGCGCTCGGCCCAAT +
Preference number: 6 (lower is better)
Translates to: LSRQKMRWARAF*HCTRRTSARPN
Trigger: ATTGGGCCGAGCGCTGGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCTACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp GTGGCCGGAGAGCCTGCATTTCAGCAAGCTCCCAGGTaGTGCGGCTGCTGGTCTGTGGACCACACTTTAAGT +
Preference number: 6 (lower is better)
Translates to: VAGEPAFQQAPR*CGCWSVDHTLS
Trigger: ACTTAAAGTGTGGTCCACAGACCAGCAGCCGCAGCACCTGGGAGCTTGCTGAAATGCAGGCTCTCCGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TCCCGAGTCAACAGTCTGAAATGTGGCCGGAGAGCCTaGATTTCAGCAAGCTCCCAGGTGCTGCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SRVNSLKCGRRA*ISASSQVLRLL
Trigger: CAGCAGCCGCAGCACCTGGGAGCTTGCTGAAATGCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp GGCTGGGCCCATCTCTGTGGGCTCCTTAATGCCCTGTaGTCGTGTCCACCACCACAGTTCTCTCTACCTGTC +
Preference number: 6 (lower is better)
Translates to: GWAHLCGLLNAL*SCPPPQFSLPV
Trigger: GACAGGTAGAGAGAACTGTGGTGGTGGACACGAGCACAGGGCATTAAGGAGCCCACAGAGATGGGCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TCAACAGAGAGTGCTGTACCCCTGGCACAACCTCCTTaGCTCCTGTCCTGGGACTCCTCTCTGACCACCCCT +
Preference number: 6 (lower is better)
Translates to: STESAVPLAQPP*LLSWDSSLTTP
Trigger: AGGGGTGGTCAGAGAGGAGTCCCAGGACAGGAGGCAAGGAGGTTGTGCCAGGGGTACAGCACTCTCTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp TTCACCTTGGGCGTTGGCTCCTTGCTTTGTACCCGGTaGGGGAAACGCAGCCGCAGGATCTCTTCCCTCAAG +
Preference number: 6 (lower is better)
Translates to: FTLGVGSLLCTR*GKRSRRISSLK
Trigger: CTTGAGGGAAGAGATCCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp AGGCTGGGCTTGGAGTCCAGGTCTAGACTGCAAGGCTaGGCTCTCTCCATAGCAGCTGCTGCTTCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: RLGLESRSRLQG*ALSIAAAASRE
Trigger: CTCCCTTGAAGCAGCAGCTGCTATGGAGAGAGCCCAGCCTTGCAGTCTAGACCTGGACTCCAAGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS CCA 72 bp CCACAAAGCTGCCACTGTGAGTGGCAAGGCTGGGCTTaGAGTCCAGGTCTAGACTGCAAGGCTGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: PQSCHCEWQGWA*SPGLDCKAGLS
Trigger: AGAGAGCCCAGCCTTGCAGTCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS CCA 72 bp ACAGACCCACAAAGCTGCCACTGTGAGTGGCAAGGCTaGGCTTGGAGTCCAGGTCTAGACTGCAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: TDPQSCHCEWQG*AWSPGLDCKAG
Trigger: CCCAGCCTTGCAGTCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS CCA 72 bp CGACACCAGGGCATACTCGTTGTGTTCTGGGCCCCCTaGCCGGGCCATTCGCAATGGCTTCATGTGGTAAGA +
Preference number: 6 (lower is better)
Translates to: RHQGILVVFWAP*PGHSQWLHVVR
Trigger: TCTTACCACATGAAGCCATTGCGAATGGCCCGGCCAGGGGGCCCAGAACACAACGAGTATGCCCTGGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AGCTGCTCATATATCTGCTGCAGGAACACCTCCCGCTaGGAAGGGTCCAAGAGGCAGCCCTGTACCAGCACC +
Preference number: 6 (lower is better)
Translates to: SCSYICCRNTSR*EGSKRQPCTST
Trigger: GGTGCTGGTACAGGGCTGCCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp CTGCCTGGCTCTGGGGATCGTACTGCTGCTGCAGCATaGTGGCCACCTTATCCTCAAAGAGGCAGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LPGSGDRTAAAA*WPPYPQRGRAA
Trigger: AGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp TCGAAGCCGTACGGACACAGTGCTGACCAAGTCGGCTaGCACCTCCTTCTCAGTGTGCTTCTTCCGGCGCAA +
Preference number: 6 (lower is better)
Translates to: SKPYGHSADQVG*HLLLSVLLPAQ
Trigger: TTGCGCCGGAAGAAGCACACTGAGAAGGAGGTGCCAGCCGACTTGGTCAGCACTGTGTCCGTACGGCTTCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp CGTCACAGGAGAAATGGCCAGGGACAAACTGCATTGTaGCTGCCAGGTACCCACGGGGCGCACAGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: RHRRNGQGQTAL*LPGTHGAHSSH
Trigger: ATGAGAGCTGTGCGCCCCGTGGGTACCTGGCAGCCACAATGCAGTTTGTCCCTGGCCATTTCTCCTGTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp TCAGGACCTGCCTGCCCAACACCATGGACCAGCAGCTaGATATGTCTGTCCACTTGGCCCACAGGACGAGCA +
Preference number: 6 (lower is better)
Translates to: SGPACPTPWTSS*ICLSTWPTGRA
Trigger: TGCTCGTCCTGTGGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGCAGGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp TGCTGCTGTGGCCTAGTGGAACGCCCTCTGCCAGAATaGTTTCTGTGGGAAGGCCTCCCCATTCTAGCCTCC +
Preference number: 6 (lower is better)
Translates to: CCCGLVERPLPE*FLWEGLPILAS
Trigger: GGAGGCTAGAATGGGGAGGCCTTCCCACAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 72 bp CCCTTTTCGTTTCACCTTGGGCGTTGGCTCCTTGCTTaGTACCCGGTGGGGGAAACGCAGCCGCAGGATCTC +
Preference number: 6 (lower is better)
Translates to: PFSFHLGRWLLA*YPVGETQPQDL
Trigger: GAGATCCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAACGAAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CAA 72 bp ATCAACAGAGAGTGCTGTACCCCTGGCACAACCTCCTaGCCTCCTGTCCTGGGACTCCTCTCTGACCACCCC +
Preference number: 6 (lower is better)
Translates to: INRECCTPGTTS*PPVLGLLSDHP
Trigger: GGGGTGGTCAGAGAGGAGTCCCAGGACAGGAGGCAAGGAGGTTGTGCCAGGGGTACAGCACTCTCTGTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp CCAGACCAGGCACTGTGCTGCCTCAGGGCTACAGCTGAACACGCTTaGGATGACCGATGGGGTCAGCCTTGTAGTGAGTGCAGTCATGGC +
Preference number: 6 (lower is better)
Translates to: PDQALCCLRATAEHA*DDRWGQPCSECSHG
Trigger: GCCATGACTGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp ATGGATAGGAAGCAGTCCAGCTGGGGGTCGATGTCCCCAATGGATTaGGCATGGACTGCTTCTAGGAGTTCCTCCAGCTCTGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: MDRKQSSWGSMSPMD*AWTASRSSSSSARA
Trigger: GGCCCTGGCAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTTCCTATCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp TGCCTCCTGTCCTGGGACTCCTCTCTGACCACCCCTGGGATTGTCTaGTCGTCCCCTTATGTCCATCTGCTCCCTAACGCTCTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: CLLSWDSSLTTPGIV*SSPYVHLLPNALLG
Trigger: ACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACGACAAGACAATCCCAGGGGTGGTCAGAGAGGAGTCCCAGGACAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp CTGAAGCCAATCAACAGAGAGTGCTGTACCCCTGGCACAACCTCCTaGCCTCCTGTCCTGGGACTCCTCTCTGACCACCCCTGGGATTGT +
Preference number: 6 (lower is better)
Translates to: LKPINRECCTPGTTS*PPVLGLLSDHPWDC
Trigger: ACAATCCCAGGGGTGGTCAGAGAGGAGTCCCAGGACAGGAGGCAAGGAGGTTGTGCCAGGGGTACAGCACTCTCTGTTGATTGGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp TGGCAGAAGCCAGTCCCTTCCCATGCAGCTCCTGCTTaGGGAAAGACCCGAGCACAGCAGGAACTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: WQKPVPSHAAPA*GKTRAQQELEE
Trigger: CTCCTCTAGTTCCTGCTGTGCTCGGGTCTTTCCTCAAGCAGGAGCTGCATGGGAAGGGACTGGCTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471177.1
CDS TCA 72 bp CGTGCTGATGCACGAGGCGCAGATGGAAGTCATAGCTaGACGAGTGCACGTGCATCAGGTCCCGCACCTTGT +
Preference number: 6 (lower is better)
Translates to: RADARGADGSHS*TSARASGPAPC
Trigger: ACAAGGTGCGGGACCTGATGCACGTGCACTCGTTCAGCTATGACTTCCATCTGCGCCTCGTGCATCAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp TCACAACCGCCGACACTACTGCAGCCTCATCCTAACTaGCCTTGGCTTCTCTGGGAGACCCTTCCTGCACCC +
Preference number: 6 (lower is better)
Translates to: SQPPTLLQPHPN*PWLLWETLPAP
Trigger: GGGTGCAGGAAGGGTCTCCCAGAGAAGCCAAGGTCAGTTAGGATGAGGCTGCAGTAGTGTCGGCGGTTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp ACCGCCTGTTCACAGAGCTGCTGCCTAGGACTCTCCTaGGCTCGAATCCCTGATGCCCACAGACCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: TACSQSCCLGLS*ARIPDAHRPCR
Trigger: TCTGCAAGGTCTGTGGGCATCAGGGATTCGAGCTCAGGAGAGTCCTAGGCAGCAGCTCTGTGAACAGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp GTTGATCCTGGAGGCCCCACACAGAGCCTGGCACACTaGAGCCAATCAACAGAGAGTGCTGTACCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: VDPGGPTQSLAH*SQSTESAVPLA
Trigger: TGCCAGGGGTACAGCACTCTCTGTTGATTGGCTTCAGTGTGCCAGGCTCTGTGTGGGGCCTCCAGGATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CAGGCGATGCATGTGCAGCCATCGCTGCCAGGAATTTaGATCCATGGACAGCACTGGCTTCCAGTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: QAMHVQPSLPGI*IHGQHWLPVGS
Trigger: GCTGCCTACTGGAAGCCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGATGGCTGCACATGCATCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp AGCCTGACACAATCTTGTGCCGGGCCGGTGCTGGTGTaGCAATGGGAAAACCCAGGCGAAGAACCATGCATG +
Preference number: 6 (lower is better)
Translates to: SLTQSCAGPVLV*QWENPGEEPCM
Trigger: CATGCATGGTTCTTCGCCTGGGTTTTCCCATTGGCACACCAGCACCGGCCCGGCACAAGATTGTGTCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp AGGACCCTGAACATGGCAGAAGCCAGTCCCTTCCCATaGAGCTCCTGCTTGAGGAAAGACCCGAGCACAGCA +
Preference number: 6 (lower is better)
Translates to: RTLNMAEASPFP*SSCLRKDPSTA
Trigger: TGCTGTGCTCGGGTCTTTCCTCAAGCAGGAGCTGCATGGGAAGGGACTGGCTTCTGCCATGTTCAGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471177.1
CDS GCA 72 bp GTGTACTTGGGAGAGTGCAGGAAGATGAGCAAGTTCTaGCGTAGGTACCATGCCAGGGCTGGAAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VYLGECRKMSKF*RRYHARAGSQG
Trigger: GCCCTGGCTTCCAGCCCTGGCATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp GACTGGTCTTCTGCCTGGCTCTGGGGATCGTACTGCTaGTGCAGCATGGTGGCCACCTTATCCTCAAAGAGG +
Preference number: 6 (lower is better)
Translates to: DWSSAWLWGSYC*CSMVATLSSKR
Trigger: CCTCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGGCAGAAGACCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 72 bp AAGGGGGCAGCGCATCCCCTTTCCATGGCCGGTCACTaGAGGATGTCTCTAGGAGCCGAAGATAGTACACAG +
Preference number: 6 (lower is better)
Translates to: KGAAHPLSMAGH*RMSLGAEDSTQ
Trigger: CTGTGTACTATCTTCGGCTCCTAGAGACATCCTGCAGTGACCGGCCATGGAAAGGGGATGCGCTGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AATCACTGGGCCAGCCCGCCTACTGCATTACTCTACTaGCCAGCAAATGGGACATGGAGCCATGCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: NHWASPPTALLY*PANGTWSHAAH
Trigger: GTGGGCAGCATGGCTCCATGTCCCATTTGCTGGGCAGTAGAGTAATGCAGTAGGCGGGCTGGCCCAGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CTCCTTCCGTGGGAAGAAGCACAAGATTTCCCCTGCTaGTGTGGCCTAGTGGAACGCCCTCTGCCAGAATGG +
Preference number: 6 (lower is better)
Translates to: LLPWEEAQDFPC*CGLVERPLPEW
Trigger: CCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TCCCTCCTTCCGTGGGAAGAAGCACAAGATTTCCCCTaGTGCTGTGGCCTAGTGGAACGCCCTCTGCCAGAA +
Preference number: 6 (lower is better)
Translates to: SLLPWEEAQDFP*CCGLVERPLPE
Trigger: TTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp GGAGCACCTGCCTCCATTCACAACCGCCGACACTACTaGAGCCTCATCCTAACTGACCTTGGCTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GAPASIHNRRHY*SLILTDLGFSG
Trigger: CCCAGAGAAGCCAAGGTCAGTTAGGATGAGGCTGCAGTAGTGTCGGCGGTTGTGAATGGAGGCAGGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CCCCTGGGATTGTCTTGTCGTCCCCTTATGTCCATCTaGTCCCTAACGCTCTGCTTGGTGATCCATCCCGGG +
Preference number: 6 (lower is better)
Translates to: PLGLSCRPLMSI*SLTLCLVIHPG
Trigger: CCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACGACAAGACAATCCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp GAGAGGCCTACTTCCATCTCCACACCTCACCCCGCCTaGACCCTGAGGTCACATAGGACCGTGTCTCCAAAT +
Preference number: 6 (lower is better)
Translates to: ERPTSISTPHPA*TLRSHRTVSPN
Trigger: ATTTGGAGACACGGTCCTATGTGACCTCAGGGTGCAGGCGGGGTGAGGTGTGGAGATGGAAGTAGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TCTCAAGAGCAGTTCTGGATGCCGAGGCTCCACGCTTaGTTCACCAGCTCCCATACGGGTACCACACTGAGG +
Preference number: 6 (lower is better)
Translates to: SQEQFWMPRLHA*FTSSHTGTTLR
Trigger: CCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp ACCTTACCTGCCTGCCCAACACCATGGACCAGCAGCTaGATATGTCTGTCCACTTGGCCCACAGGACGAGCA +
Preference number: 6 (lower is better)
Translates to: TLPACPTPWTSS*ICLSTWPTGRA
Trigger: TGCTCGTCCTGTGGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGCAGGTAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470897.2
ENST00000639197.1
CDS CCA 72 bp TCCAGCTGGGGGTCGATGTCCCCAATGGATTTGGCATaGACTGCTTCTAGGAGTTCCTCCAGCTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSWGSMSPMDLA*TASRSSSSSAR
Trigger: CCTGGCAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CCTGGCTCTGGGGATCGTACTGCTGCTGCAGCATGGTaGCCACCTTATCCTCAAAGAGGCAGAGCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: PGSGDRTAAAAW*PPYPQRGRAAH
Trigger: ATGAGCAGCTCTGCCTCTTTGAGGATAAGGTGGCCACCATGCTGCAGCAGCAGTACGATCCCCAGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp GCAGACATCTGTCAGAGAGATCTCTGGCCCAGGGTCTaGAATGCCAGGGACACGGGTGCTCTGAAACTCAGG +
Preference number: 6 (lower is better)
Translates to: ADICQRDLWPRV*NARDTGALKLR
Trigger: CCTGAGTTTCAGAGCACCCGTGTCCCTGGCATTCCAGACCCTGGGCCAGAGATCTCTCTGACAGATGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp TCATCCGTGATCTCAGGACCTGCCTGCCCAACACCATaGACCAGCAGCTGGATATGTCTGTCCACTTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSVISGPACPTP*TSSWICLSTWP
Trigger: GGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGTTGGGCAGGCAGGTCCTGAGATCACGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AGGCCAAGCTTCTGGCTGAGTAGGCAGAAGATGAGATaGGCTCGTGCATTCTGCCACTGCACCAGGCGAACC +
Preference number: 6 (lower is better)
Translates to: RPSFWLSRQKMR*ARAFCHCTRRT
Trigger: GGTTCGCCTGGTGCAGTGGCAGAATGCACGAGCCCATCTCATCTTCTGCCTACTCAGCCAGAAGCTTGGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GGTCTCCAGCTCTCCAGCACTGATGGGCATGGTGGCTaGGGTAGAACGCTGCTGCCAGGTTACAAACAGGTT +
Preference number: 6 (lower is better)
Translates to: GLQLSSTDGHGG*GRTLLPGYKQV
Trigger: AACCTGTTTGTAACCTGGCAGCAGCGTTCTACCCCAGCCACCATGCCCATCAGTGCTGGAGAGCTGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp CCAGGCGATGCATGTGCAGCCATCGCTGCCAGGAATTaGCATCCATGGACAGCACTGGCTTCCAGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: PGDACAAIAARN*HPWTALASSRQ
Trigger: CTGCCTACTGGAAGCCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGATGGCTGCACATGCATCGCCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CAA 72 bp ACCGGAGAGCTAGTGCTCTTGGGGCTCCCATCAGTCTaGGTTTTAGGGCAGGAGAAGGAGCCTCGACCCTCT +
Preference number: 6 (lower is better)
Translates to: TGELVLLGLPSV*VLGQEKEPRPS
Trigger: AGAGGGTCGAGGCTCCTTCTCCTGCCCTAAAACCAAGACTGATGGGAGCCCCAAGAGCACTAGCTCTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp CATGCAGCCAGGCAGCTGGGTCGAAGAGCATGGCTGTaGCACAGTAATGCACCAGGCGGGATGACTGCTTCA +
Preference number: 6 (lower is better)
Translates to: HAARQLGRRAWL*HSNAPGGMTAS
Trigger: TGAAGCAGTCATCCCGCCTGGTGCATTACTGTGCAACAGCCATGCTCTTCGACCCAGCTGCCTGGCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp GCACTGTGCTGCCTCAGGGCTACAGCTGAACACGCTTaGGATGACCGATGGGGTCAGCCTTGTAGTGAGTGC +
Preference number: 6 (lower is better)
Translates to: ALCCLRATAEHA*DDRWGQPCSEC
Trigger: GCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 72 bp GTCCCGTTCTGTCTAGGCCTCCCTCCAGAGCAGAGCTaGTTTGGTCAGGCTGAGGGGCACATCTGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: VPFCLGLPPEQS*FGQAEGHICLV
Trigger: CACCAAACAGATGTGCCCCTCAGCCTGACCAAACAAGCTCTGCTCTGGAGGGAGGCCTAGACAGAACGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp GGATTAGCACCAGGCGATGCATGTGCAGCCATCGCTGCCAGGAATTaGCATCCATGGACAGCACTGGCTTCCAGTAGGCAGCAAACTGGG +
Preference number: 6 (lower is better)
Translates to: GLAPGDACAAIAARN*HPWTALASSRQQTG
Trigger: CCCAGTTTGCTGCCTACTGGAAGCCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGATGGCTGCACATGCATCGCCTGGTGCTAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CAA 90 bp TGGGGTGCACTGACTGTGCCCGCAGCTCATTCACATACCTGTGAGTaGACAGCCTGCCCCATTGGGATTCGGGAACATTCCAGGGCAAAC +
Preference number: 6 (lower is better)
Translates to: WGALTVPAAHSHTCE*TACPIGIREHSRAN
Trigger: GTTTGCCCTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGGCACAGTCAGTGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp CTGGTTCATCTGGCTGCCACCCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTTCAGACTGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LVHLAATQGAGH*GLPIPVQTEAA
Trigger: TGCTGCTTCAGTCTGAACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357658.4
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS TCA 72 bp CTGGTTCATCTGGCTGCCACCCAGGGGGCAGGACACTaGGGACTTCCAATTCCTGTTCAGACAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: LVHLAATQGAGH*GLPIPVQTASP
Trigger: AGGAGATGCTGTCTGAACAGGAATTGGAAGTCCTCAGTGTCCTGCCCCCTGGGTGGCAGCCAGATGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS TCA 72 bp TGCAAGGGAGGAAACAGACCCACAAAGCTGCCACTGTaGGTGGCAAGGCTGGGCTTGGAGTCCAGGTCTAGA +
Preference number: 6 (lower is better)
Translates to: CKGGNRPTKLPL*VARLGLESRSR
Trigger: TCTAGACCTGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGTTTCCTCCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 72 bp GGCGACAGCTCTGGGGGAAGCGGCTTAGGAGAACTTTaGTCAGGCTCTGGTACCAGGAGACCGTCATGGATA +
Preference number: 6 (lower is better)
Translates to: GDSSGGSGLGEL*SGSGTRRPSWI
Trigger: TATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GAGCATGGCTGTTGCACAGTAATGCACCAGGCGGGATaGCTGCTTCAGGGTCTCCAGCTCTCCAGCACTGAT +
Preference number: 6 (lower is better)
Translates to: EHGCCTVMHQAG*LLQGLQLSSTD
Trigger: ATCAGTGCTGGAGAGCTGGAGACCCTGAAGCAGTCATCCCGCCTGGTGCATTACTGTGCAACAGCCATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp TCCCAGATTCCATCAGGGTCTGCCACAGACTCTAGATaGCTACAGGCCAGACCAGGCACTGTGCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SQIPSGSATDSR*LQARPGTVLPQ
Trigger: CTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGTCTGTGGCAGACCCTGATGGAATCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp TTGGCTTCTCTGGGAGACCCTTCCTGCACCCTGAAATaGATCCTCTGCACAAGCACTGTGCTGCAGGACCCC +
Preference number: 6 (lower is better)
Translates to: LASLGDPSCTLK*ILCTSTVLQDP
Trigger: GGGGTCCTGCAGCACAGTGCTTGTGCAGAGGATTCATTTCAGGGTGCAGGAAGGGTCTCCCAGAGAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp TGCACCCTGAGGTCACATAGGACCGTGTCTCCAAATTaGGCCTCAGTCCTCATCCTCGCTGGCTTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: CTLRSHRTVSPN*ASVLILAGLLV
Trigger: GACCAGCAAGCCAGCGAGGATGAGGACTGAGGCTCAATTTGGAGACACGGTCCTATGTGACCTCAGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp CTACTTCCATCTCCACACCTCACCCCGCCTGCACCCTaGGGTCACATAGGACCGTGTCTCCAAATTGAGCCT +
Preference number: 6 (lower is better)
Translates to: LLPSPHLTPPAP*GHIGPCLQIEP
Trigger: AGGCTCAATTTGGAGACACGGTCCTATGTGACCTCAGGGTGCAGGCGGGGTGAGGTGTGGAGATGGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CAGTGGACCTGGTGGCTCCAATGTCAGCAAGAAGGGTaGCCGGTAGTCCAAGGGCAGCTTCTCATACCTGAT +
Preference number: 6 (lower is better)
Translates to: QWTWWLQCQQEG*PVVQGQLLIPD
Trigger: ATCAGGTATGAGAAGCTGCCCTTGGACTACCGGGCACCCTTCTTGCTGACATTGGAGCCACCAGGTCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp GCTGTATCAGGTATTCAAAGCTCAGCATGGAGCCTATaGAGGCAGCATCCCGTGGGTGGAGAGCTTGCGGGA +
Preference number: 6 (lower is better)
Translates to: AVSGIQSSAWSL*RQHPVGGELAG
Trigger: TCCCGCAAGCTCTCCACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAATACCTGATACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp ATGATGGCTGCCCTGGGGATCGTGGAAATGAAGCACTaGTTTCAGATGTTGACCGGTGGTGCTGAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: MMAALGIVEMKH*FQMLTGGAEGP
Trigger: CGGACCCTCAGCACCACCGGTCAACATCTGAAAGCAGTGCTTCATTTCCACGATCCCCAGGGCAGCCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS GCA 72 bp GGGTGTCATTGGGACCCTCACTGTCTGAGCCACTGCTaGCACCATCATAACCTAGGTGGTCTGAGTCCACAC +
Preference number: 6 (lower is better)
Translates to: GCHWDPHCLSHC*HHHNLGGLSPH
Trigger: GTGTGGACTCAGACCACCTAGGTTATGATGGTGGCAGCAGTGGCTCAGACAGTGAGGGTCCCAATGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638769.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp ATGGCTTTGGCAGCCTGCTGTGTTGGTCTCCTCCACTaGAAGAAGTTCCTTCCCAGAAGCAGCAGATGCCGC +
Preference number: 6 (lower is better)
Translates to: MALAACCVGLLH*KKFLPRSSRCR
Trigger: GCGGCATCTGCTGCTTCTGGGAAGGAACTTCTTGCAGTGGAGGAGACCAACACAGCAGGCTGCCAAAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AGCTTCTTGTCCACAACCTCTAGTAGCAAGAGCCTCTaGCGGGGAGCATTTCGCCCTGAGCTCCCATCACCT +
Preference number: 6 (lower is better)
Translates to: SFLSTTSSSKSL*RGAFRPELPSP
Trigger: AGGTGATGGGAGCTCAGGGCGAAATGCTCCCCGGCAGAGGCTCTTGCTACTAGAGGTTGTGGACAAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp TGTGGCAGTACACAGGAGCCCATGGCCACAGTACAATaGCTCCTTCGACCCTTTTCAGGTTTCCAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: CGSTQEPMATVQ*LLRPFSGFQGA
Trigger: GGCTCCCTGGAAACCTGAAAAGGGTCGAAGGAGGCATTGTACTGTGGCCATGGGCTCCTGTGTACTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 72 bp ACTTACCGTGCATGTGCATACACTTCCACACGGTCCTaGAGGACCCGGACAATGAGCCAGAAGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: TYRACAYTSTRS*RTRTMSQKSGR
Trigger: CCTGCCTGACTTCTGGCTCATTGTCCGGGTCCTGCAGGACCGTGTGGAAGTGTATGCACATGCACGGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp ACACCATGGACCAGCAGCTGGATATGTCTGTCCACTTaGCCCACAGGACGAGCAGCATCTGAACTGCGGCTA +
Preference number: 6 (lower is better)
Translates to: TPWTSSWICLST*PTGRAASELRL
Trigger: TAGCCGCAGTTCAGATGCTGCTCGTCCTGTGGGCCAAGTGGACAGACATATCCAGCTGCTGGTCCATGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470897.2
ENST00000562955.2
ENST00000634258.3
ENST00000639197.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GGGCAGCTTCTCATACCTGATGAGCAGTTTGTCCAGTaGCTTATGCAGGACCACAAGGCAGGGCCGGTCAGA +
Preference number: 6 (lower is better)
Translates to: GQLLIPDEQFVQ*LMQDHKAGPVR
Trigger: TCTGACCGGCCCTGCCTTGTGGTCCTGCATAAGCCACTGGACAAACTGCTCATCAGGTATGAGAAGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp CAAGTAGATGTCCAAGTCAGGGAGGCCACCCTGTGGTaGGAGTGGATGTTGGAAGTGGTTCCGGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: QVDVQVREATLW*EWMLEVVPAVA
Trigger: AGCAACAGCCGGAACCACTTCCAACATCCACTCCCACCACAGGGTGGCCTCCCTGACTTGGACATCTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GCCGGGCCATTCGCAATGGCTTCATGTGGTAAGAGCTaGCGTGATCAGCCACGTAGTTGTATAGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: AGPFAMASCGKS*RDQPRSCIAGG
Trigger: CCCACCAGCTATACAACTACGTGGCTGATCACGCCAGCTCTTACCACATGAAGCCATTGCGAATGGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AGCAGTCCAGCTGGGGGTCGATGTCCCCAATGGATTTaGCATGGACTGCTTCTAGGAGTTCCTCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: SSPAGGRCPQWI*HGLLLGVPPAL
Trigger: CAGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp TGTGTCCCGAGGCCCCTCATCTTCTCGCCTGCTGGATaGAGGGCAATAGAAGAAGTAGTGGGGATTGGAAGG +
Preference number: 6 (lower is better)
Translates to: CVPRPLIFSPAG*RAIEEVVGIGR
Trigger: CCTTCCAATCCCCACTACTTCTTCTATTGCCCTCCATCCAGCAGGCGAGAAGATGAGGGGCCTCGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478140.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp TGTGAGGGAACGCTCTGGCCCAAATACAAAACTCAGTaGCAGAGTTTGGCGAAGGCAGGTGGAGCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CEGTLWPKYKTQ*QSLAKAGGASR
Trigger: CCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 72 bp GAAGAACTGTCCACAACAACCGGGCAGCGGATGACCTaGGTCAGTTGCTCAAATTCCTCCTCTCGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: EELSTTTGQRMT*VSCSNSSSRSG
Trigger: CCCACTGCGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTGTTGTGGACAGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp GACAGGATGGATGGAAGGAGGAACCGGGACACCATGTaGGCAGAGCTTCTGGACACTGAGGCACAACCAATC +
Preference number: 6 (lower is better)
Translates to: DRMDGRRNRDTM*AELLDTEAQPI
Trigger: GATTGGTTGTGCCTCAGTGTCCAGAAGCTCTGCCCACATGGTGTCCCGGTTCCTCCTTCCATCCATCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp ACCACAGAGAAGGCATTGAGCACAGAGCGCAGGGCCTaGATGGCTGGGGGAATAACATGGGCTCAGGAAACT +
Preference number: 6 (lower is better)
Translates to: TTEKALSTERRA*MAGGITWAQET
Trigger: AGTTTCCTGAGCCCATGTTATTCCCCCAGCCATCCAGGCCCTGCGCTCTGTGCTCAATGCCTTCTCTGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp CCTACTGCATTACTCTACTGCCCAGCAAATGGGACATaGAGCCATGCTGCCCACAGCACACTGGGGTGCACT +
Preference number: 6 (lower is better)
Translates to: PTALLYCPANGT*SHAAHSTLGCT
Trigger: AGTGCACCCCAGTGTGCTGTGGGCAGCATGGCTCCATGTCCCATTTGCTGGGCAGTAGAGTAATGCAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp CTCAGGGCTACAGCTGAACACGCTTTGGATGACCGATaGGGTCAGCCTTGTAGTGAGTGCAGTCATGGCACC +
Preference number: 6 (lower is better)
Translates to: LRATAEHALDDR*GQPCSECSHGT
Trigger: GGTGCCATGACTGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp CACTGTGCTGCCTCAGGGCTACAGCTGAACACGCTTTaGATGACCGATGGGGTCAGCCTTGTAGTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: HCAASGLQLNTL*MTDGVSLVVSA
Trigger: TGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp GCAGCAGCAGGAGACAGGGTTAAGGTATGGCTGCACTaGCTGCCCAAAACACATTTCCCTCCTTCCGTGGGA +
Preference number: 6 (lower is better)
Translates to: AAAGDRVKVWLH*LPKTHFPPSVG
Trigger: TCCCACGGAAGGAGGGAAATGTGTTTTGGGCAGCCAGTGCAGCCATACCTTAACCCTGTCTCCTGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp CTCAAGGGGACTTACCAGGTACTGAGTTCCCAAGTCTaGGCTTTGGAAATGGCGACAGCTCTGGGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LKGTYQVLSSQV*ALEMATALGEA
Trigger: CGCTTCCCCCAGAGCTGTCGCCATTTCCAAAGCCCAGACTTGGGAACTCAGTACCTGGTAAGTCCCCTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp GGGCTCCAGCCTACTGACAAAGTTCTGACAGCTCCTTaGGTTGTCAGTTCCAGAGCCTGGCCCTCAGGATCT +
Preference number: 6 (lower is better)
Translates to: GLQPTDKVLTAP*VVSSRAWPSGS
Trigger: AGATCCTGAGGGCCAGGCTCTGGAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGTAGGCTGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp CTTGTAATGCCTCCTCTCTTGAACCTCAGCTCTGGCTaGGCCCATCTCTGTGGGCTCCTTAATGCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: LVMPPLLNLSSG*AHLCGLLNALC
Trigger: GCACAGGGCATTAAGGAGCCCACAGAGATGGGCCCAGCCAGAGCTGAGGTTCAAGAGAGGAGGCATTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 72 bp TGGCGACAGCTCTGGGGGAAGCGGCTTAGGAGAACTTaGATCAGGCTCTGGTACCAGGAGACCGTCATGGAT +
Preference number: 6 (lower is better)
Translates to: WRQLWGKRLRRT*IRLWYQETVMD
Trigger: ATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp TCCTGGGACTCCTCTCTGACCACCCCTGGGATTGTCTaGTCGTCCCCTTATGTCCATCTGCTCCCTAACGCT +
Preference number: 6 (lower is better)
Translates to: SWDSSLTTPGIV*SSPYVHLLPNA
Trigger: AGCGTTAGGGAGCAGATGGACATAAGGGGACGACAAGACAATCCCAGGGGTGGTCAGAGAGGAGTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 72 bp TTCTCAAGAGCAGTTCTGGATGCCGAGGCTCCACGCTaGCTTCACCAGCTCCCATACGGGTACCACACTGAG +
Preference number: 6 (lower is better)
Translates to: FSRAVLDAEAPR*LHQLPYGYHTE
Trigger: CTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 90 bp CTGTTCAGACTGAAGCAGCATCTCCTGGGGTGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAACCAAGCCAGGCGAACATTTCGGGA +
Preference number: 6 (lower is better)
Translates to: LFRLKQHLLGCGLHS*VQMTEEPSQANISG
Trigger: TCCCGAAATGTTCGCCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACACCCCAGGAGATGCTGCTTCAGTCTGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357658.4
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS CAA 90 bp CATCTGCTCCCTAACGCTCTGCTTGGTGATCCATCCCGGGATGATTaGCTCTCCCAAGGCTTCAGTTACCGCCTGTTCACAGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HLLPNALLGDPSRDD*LSQGFSYRLFTELL
Trigger: CAGCAGCTCTGTGAACAGGCGGTAACTGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp GAGACGGAATTCTCAAGAGCAGTTCTGGATGCCGAGGCTCCACGCTaGCTTCACCAGCTCCCATACGGGTACCACACTGAGGCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: ETEFSRAVLDAEAPR*LHQLPYGYHTEAPL
Trigger: TAAAGGAGCCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS TCA 72 bp CTCGGCTCTGGGGGCAGAGGACCCCATTCCTTGCTCTaGCACAGCTGTATCAGGTATTCAAAGCTCAGCATG +
Preference number: 6 (lower is better)
Translates to: LGSGGRGPHSLL*HSCIRYSKLSM
Trigger: CATGCTGAGCTTTGAATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTCTGCCCCCAGAGCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS TCA 72 bp GAGCTGAAGAACTGTCCACAACAACCGGGCAGCGGATaGCCTGGGTCAGTTGCTCAAATTCCTCCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: ELKNCPQQPGSG*PGSVAQIPPLA
Trigger: TGCGAGAGGAGGAATTTGAGCAACTGACCCAGGTCATCCGCTGCCCGGTTGTTGTGGACAGTTCTTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp CTGCTCAAAGATGCGGACACTGGTGTCTCCAGCCATTaGGGTGACCAGTGCGGTGAACTCAGACAGGATGGA +
Preference number: 6 (lower is better)
Translates to: LLKDADTGVSSH*GDQCGELRQDG
Trigger: TCCATCCTGTCTGAGTTCACCGCACTGGTCACCTCAATGGCTGGAGACACCAGTGTCCGCATCTTTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GTGCAAGAGGAACACAGGGGCATCAGAGAGTGGGAGTaGTACATGCCGAGGCTTCCTCAGAGTAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: VQEEHRGIREWE*YMPRLPQSRWA
Trigger: AGCCCATCTACTCTGAGGAAGCCTCGGCATGTATCACTCCCACTCTCTGATGCCCCTGTGTTCCTCTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp TGCACTGACTGTGCCCGCAGCTCATTCACATACCTGTaGGTTGACAGCCTGCCCCATTGGGATTCGGGAACA +
Preference number: 6 (lower is better)
Translates to: CTDCARSSFTYL*VDSLPHWDSGT
Trigger: TGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGGCACAGTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp GATGGGCTAAGGTCCAACTCAATGACAAACCGATACTaGCAAGCCAGGAAGGTGACCCGGGTGGAAGGTACC +
Preference number: 6 (lower is better)
Translates to: DGLRSNSMTNRY*QARKVTRVEGT
Trigger: GGTACCTTCCACCCGGGTCACCTTCCTGGCTTGGCAGTATCGGTTTGTCATTGAGTTGGACCTTAGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357658.4
ENST00000372450.8
ENST00000406439.7
ENST00000562955.2
ENST00000634258.3
ENST00000638631.1
CDS GCA 72 bp AGGATTAGCACCAGGCGATGCATGTGCAGCCATCGCTaGCAGGAATTTGCATCCATGGACAGCACTGGCTTC +
Preference number: 6 (lower is better)
Translates to: RISTRRCMCSHR*QEFASMDSTGF
Trigger: GAAGCCAGTGCTGTCCATGGATGCAAATTCCTGGCAGCGATGGCTGCACATGCATCGCCTGGTGCTAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp AGACCCTCGGCTCTGGGGGCAGAGGACCCCATTCCTTaGTCTGACACAGCTGTATCAGGTATTCAAAGCTCA +
Preference number: 6 (lower is better)
Translates to: RPSALGAEDPIP*SDTAVSGIQSS
Trigger: TGAGCTTTGAATACCTGATACAGCTGTGTCAGAGCAAGGAATGGGGTCCTCTGCCCCCAGAGCCGAGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp GCCTGGCGAGCTGCTCCTCGGAGTTTCTCCTCCAGCTaGACAATACTAATGTTCCCCTTTTCCCACACATCC +
Preference number: 6 (lower is better)
Translates to: AWRAAPRSFSSS*TILMFPFSHTS
Trigger: GGATGTGTGGGAAAAGGGGAACATTAGTATTGTGCAGCTGGAGGAGAAACTCCGAGGAGCAGCTCGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp CCCGCAGCTCATTCACATACCTGTGAGTTGACAGCCTaGCCCATTGGGATTCGGGAACATTCCAGGGCAAAC +
Preference number: 6 (lower is better)
Translates to: PAAHSHTCELTA*PIGIREHSRAN
Trigger: GTTTGCCCTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp GCTTTGGATGACCGATGGGGTCAGCCTTGTAGTGAGTaGAGTCATGGCACCAGAATGAGCACTGACCTAGCC +
Preference number: 6 (lower is better)
Translates to: ALDDRWGQPCSE*SHGTRMSTDLA
Trigger: GGCTAGGTCAGTGCTCATTCTGGTGCCATGACTGCACTCACTACAAGGCTGACCCCATCGGTCATCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp ACTCTAGATGACTACAGGCCAGACCAGGCACTGTGCTaGCTCAGGGCTACAGCTGAACACGCTTTGGATGAC +
Preference number: 6 (lower is better)
Translates to: TLDDYRPDQALC*LRATAEHALDD
Trigger: GTCATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CAGACTCTAGATGACTACAGGCCAGACCAGGCACTGTaGTGCCTCAGGGCTACAGCTGAACACGCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: QTLDDYRPDQAL*CLRATAEHALD
Trigger: ATCCAAAGCGTGTTCAGCTGTAGCCCTGAGGCAGCACAGTGCCTGGTCTGGCCTGTAGTCATCTAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TGTCGTCCCCTTATGTCCATCTGCTCCCTAACGCTCTaGTTGGTGATCCATCCCGGGATGATTTGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: CRPLMSICSLTL*LVIHPGMICSP
Trigger: GGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TGGTGGTCTTCCTTTCTTCTCAGCCCCACCTTACCCTaGATATGCCACCCACCCGAGATGAGAGCAGTAGTG +
Preference number: 6 (lower is better)
Translates to: WWSSFLLSPTLP*ICHPPEMRAVV
Trigger: CACTACTGCTCTCATCTCGGGTGGGTGGCATATGCAGGGTAAGGTGGGGCTGAGAAGAAAGGAAGACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp TGGGGGAAGCGGCTTAGGAGAACTTTGATCAGGCTCTaGTACCAGGAGACCGTCATGGATAGGAAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: WGKRLRRTLIRL*YQETVMDRKQS
Trigger: GGACTGCTTCCTATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CTGATTCAGCACAACCAGGTACTGAGTTCCCAAGTCTaGGCTTTGGAAATGGCGACAGCTCTGGGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LIQHNQVLSSQV*ALEMATALGEA
Trigger: CGCTTCCCCCAGAGCTGTCGCCATTTCCAAAGCCCAGACTTGGGAACTCAGTACCTGGTTGTGCTGAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp CGGATCTCATTCATGGTGGTCTCAATAGCCAGTCTGTaGGGCGTGGCCAAATTGGATAGTCCTGGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: RISFMVVSIASL*GVAKLDSPGCL
Trigger: GAGGCACCCAGGACTATCCAATTTGGCCACGCCCCACAGACTGGCTATTGAGACCACCATGAATGAGATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638642.1
ENST00000648058.1
CDS CCA 72 bp CGCTCTGGCCCAAATACAAAACTCAGTGGCAGAGTTTaGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATGG +
Preference number: 6 (lower is better)
Translates to: RSGPNTKLSGRV*RRQVERPGELW
Trigger: CCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 72 bp CTGTCAGGGTCTTCAAGAAGAACATGGCCAGGGAGATaGAGGCGGCGGAACTCCTCCTTGAATTGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: LSGSSRRTWPGR*RRRNSSLNCVR
Trigger: CCTCACACAATTCAAGGAGGAGTTCCGCCGCCTCCATCTCCCTGGCCATGTTCTTCTTGAAGACCCTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp GGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTACTTaGGAACTGGCCCGCTTGTTCTCACTCTCCCAAACT +
Preference number: 6 (lower is better)
Translates to: GLQAPPLWISLT*ELARLFSLSQT
Trigger: AGTTTGGGAGAGTGAGAACAAGCGGGCCAGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp ACAGAGCGCAGGGCCTGGATGGCTGGGGGAATAACATaGGCTCAGGAAACTGCCTTTTCCAGATCCTTCCAA +
Preference number: 6 (lower is better)
Translates to: TERRAWMAGGIT*AQETAFSRSFQ
Trigger: TTGGAAGGATCTGGAAAAGGCAGTTTCCTGAGCCCATGTTATTCCCCCAGCCATCCAGGCCCTGCGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp GGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCTGTaGGAAGGCCTCCCCATTCTAGCCTCCCTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: GLVERPLPEWFL*EGLPILASLFH
Trigger: ATGAAAAAGGGAGGCTAGAATGGGGAGGCCTTCCCACAGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp TCCGTGGGAAGAAGCACAAGATTTCCCCTGCTGCTGTaGCCTAGTGGAACGCCCTCTGCCAGAATGGTTTCT +
Preference number: 6 (lower is better)
Translates to: SVGRSTRFPLLL*PSGTPSARMVS
Trigger: AGAAACCATTCTGGCAGAGGGCGTTCCACTAGGCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp TGCACTGGCTGCCCAAAACACATTTCCCTCCTTCCGTaGGAAGAAGCACAAGATTTCCCCTGCTGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: CTGCPKHISLLP*EEAQDFPCCCG
Trigger: GCCACAGCAGCAGGGGAAATCTTGTGCTTCTTCCCACGGAAGGAGGGAAATGTGTTTTGGGCAGCCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp GTCAACCTGCAGATCCCGAGTCAACAGTCTGAAATGTaGCCGGAGAGCCTGCATTTCAGCAAGCTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: VNLQIPSQQSEM*PESLHFSKLPG
Trigger: ACCTGGGAGCTTGCTGAAATGCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp GGGAAATGGAAGAGACGGAATTCTCAAGAGCAGTTCTaGATGCCGAGGCTCCACGCTTGCTTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GKWKRRNSQEQF*MPRLHACFTSS
Trigger: GGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp AAGCAGTCCAGCTGGGGGTCGATGTCCCCAATGGATTaGGCATGGACTGCTTCTAGGAGTTCCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: KQSSWGSMSPMD*AWTASRSSSSS
Trigger: AGAGCTGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp TGGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTACTaGGGAACTGGCCCGCTTGTTCTCACTCTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: WPSGSSPLDFSY*GTGPLVLTLPN
Trigger: GTTTGGGAGAGTGAGAACAAGCGGGCCAGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp CTGACTGTGCCCGCAGCTCATTCACATACCTGTGAGTaGACAGCCTGCCCCATTGGGATTCGGGAACATTCC +
Preference number: 6 (lower is better)
Translates to: LTVPAAHSHTCE*TACPIGIREHS
Trigger: GGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGGTATGTGAATGAGCTGCGGGCACAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 72 bp CGTCCCCTTATGTCCATCTGCTCCCTAACGCTCTGCTaGGTGATCCATCCCGGGATGATTTGCTCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: RPLMSICSLTLC*VIHPGMICSPK
Trigger: CTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp CAATTCCTGTTCAGACAGCATCTCCTGGGGTGTGGCCTGCACAGTTaGGTGCAGATGACTGAGGAACCAAGCCAGGCGAACATTTCGGGA +
Preference number: 6 (lower is better)
Translates to: QFLFRQHLLGCGLHS*VQMTEEPSQANISG
Trigger: TCCCGAAATGTTCGCCTGGCTTGGTTCCTCAGTCATCTGCACCAAACTGTGCAGGCCACACCCCAGGAGATGCTGTCTGAACAGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372450.8
CDS CAA 90 bp CTTTGGAAATGGCGACAGCTCTGGGGGAAGCGGCTTAGGAGAACTTaGATCAGGCTCTGGTACCAGGAGACCGTCATGGATAGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LWKWRQLWGKRLRRT*IRLWYQETVMDRKQ
Trigger: CTGCTTCCTATCCATGACGGTCTCCTGGTACCAGAGCCTGATCAAAGTTCTCCTAAGCCGCTTCCCCCAGAGCTGTCGCCATTTCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp TGTGAGGGAACGCTCTGGCCCAAATACAAAACTCAGTGGCAGAGTTaGGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATGGATATGGGC +
Preference number: 6 (lower is better)
Translates to: CEGTLWPKYKTQWQS*AKAGGASRRTMDMG
Trigger: GCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CAA 90 bp TCACTGCAGGATGTCTCTAGGAGCCTGGGAAAGAGCAGCATGTCTTaGGACATGCCTCCTCCCAGGCCATCCTTAATTCATGCCCTACCC +
Preference number: 6 (lower is better)
Translates to: SLQDVSRSLGKSSMS*DMPPPRPSLIHALP
Trigger: GGGTAGGGCATGAATTAAGGATGGCCTGGGAGGAGGCATGTCCAAAGACATGCTGCTCTTTCCCAGGCTCCTAGAGACATCCTGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp GGAGACTGTCAACCTGCAGATCCCGAGTCAACAGTCTaGAATGTGGCCGGAGAGCCTGCATTTCAGCAAGCT +
Preference number: 6 (lower is better)
Translates to: GDCQPADPESTV*NVAGEPAFQQA
Trigger: AGCTTGCTGAAATGCAGGCTCTCCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGTTGACAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp TCTGTGAACAGCATGGACAGCTGTGAGTTGACAGCCTaGCCCATTGGGATTCGGGAACATTCCAGGGCAAAC +
Preference number: 6 (lower is better)
Translates to: SVNSMDSCELTA*PIGIREHSRAN
Trigger: GTTTGCCCTGGAATGTTCCCGAATCCCAATGGGGCAGGCTGTCAACTCACAGCTGTCCATGCTGTTCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp TTATCCTCAAAGAGGCAGAGCTGCTCATATATCTGCTaGAGGAACACCTCCCGCTGGGAAGGGTCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: LSSKRQSCSYIC*RNTSRWEGSKR
Trigger: CCTCTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCTCTGCCTCTTTGAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 72 bp ACCTTATCCTCAAAGAGGCAGAGCTGCTCATATATCTaGTGCAGGAACACCTCCCGCTGGGAAGGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: TLSSKRQSCSYI*CRNTSRWEGSK
Trigger: CTTGGACCCTTCCCAGCGGGAGGTGTTCCTGCAGCAGATATATGAGCAGCTCTGCCTCTTTGAGGATAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS GCA 72 bp AGCCGCAGTAATATTCAGGGTTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGAGAAATGCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: SRSNIQGSVLPH*AGRNRGEMPGG
Trigger: ACCACCGGGCATTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp GGCCCGAGGCCATCATCTGACCTTAAAGATGATGGCTaGCCTGGGGATCGTGGAAATGAAGCACTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: GPRPSSDLKDDG*PGDRGNEALLS
Trigger: TGAAAGCAGTGCTTCATTTCCACGATCCCCAGGGCAGCCATCATCTTTAAGGTCAGATGATGGCCTCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638642.1
ENST00000648058.1
CDS GCA 72 bp GCACTGATGGGCATGGTGGCTGGGGTAGAACGCTGCTaGCAGGTTACAAACAGGTTTTCCATCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: ALMGMVAGVERC*QVTNRFSIFIW
Trigger: CCAGATGAAGATGGAAAACCTGTTTGTAACCTGGCAGCAGCGTTCTACCCCAGCCACCATGCCCATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp CACCGCAGTAATATTCAGGGTTCAGTGCTTCCCCACTaGGCAGGAAGGAATAGAGGAGAAATGCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: HRSNIQGSVLPH*AGRNRGEMPGG
Trigger: ACCACCGGGCATTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS GCA 72 bp CAGCAGGAGACAGGGTTAAGGTATGGCTGCACTGGCTaGCCAAAACACATTTCCCTCCTTCCGTGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: QQETGLRYGCTG*PKHISLLPWEE
Trigger: TTCTTCCCACGGAAGGAGGGAAATGTGTTTTGGGCAGCCAGTGCAGCCATACCTTAACCCTGTCTCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp AGTGTGCACACAAATCACCTGGGGAGACTGTCAACCTaGAGATCCCGAGTCAACAGTCTGAAATGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SVHTNHLGRLST*RSRVNSLKCGR
Trigger: CCGGCCACATTTCAGACTGTTGACTCGGGATCTGCAGGTTGACAGTCTCCCCAGGTGATTTGTGTGCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp CTAACGCTCTGCTTGGTGATCCATCCCGGGATGATTTaGTCTCCCAAGGCTTCAGTTACCGCCTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: LTLCLVIHPGMI*SPKASVTACSQ
Trigger: CTGTGAACAGGCGGTAACTGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp TCTGACACAGCTGTATCAGGTATTCAAAGCTCAGCATaGAGCCTATGCAGGCAGCATCCCGTGGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: SDTAVSGIQSSA*SLCRQHPVGGE
Trigger: CTCTCCACCCACGGGATGCTGCCTGCATAGGCTCCATGCTGAGCTTTGAATACCTGATACAGCTGTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp TGCTGGCACTGTGGCAGCAATCCCATTAGGTCAAAATaGAAAGGGATCTCATGGACGCAGGTGTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: CWHCGSNPIRSK*KGISWTQVSPP
Trigger: GGGAGGAGACACCTGCGTCCATGAGATCCCTTTCCATTTTGACCTAATGGGATTGCTGCCACAGTGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp ATAGGAAGCAGTCCAGCTGGGGGTCGATGTCCCCAATaGATTTGGCATGGACTGCTTCTAGGAGTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: IGSSPAGGRCPQ*IWHGLLLGVPP
Trigger: TGGAGGAACTCCTAGAAGCAGTCCATGCCAAATCCATTGGGGACATCGACCCCCAGCTGGACTGCTTCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp AACCCAAAGGGTAGTGTGGCAGTACACAGGAGCCCATaGCCACAGTACAATGCCTCCTTCGACCCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: NPKGSVAVHRSP*PQYNASFDPFQ
Trigger: CTGAAAAGGGTCGAAGGAGGCATTGTACTGTGGCCATGGGCTCCTGTGTACTGCCACACTACCCTTTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp GGGGGCTGGATGAACTCCACATCAGCTGGTGTCAGCTaGCAGTTCCGAACAAGCATAACTGTGATGACGTCC +
Preference number: 6 (lower is better)
Translates to: GGWMNSTSAGVS*QFRTSITVMTS
Trigger: GGACGTCATCACAGTTATGCTTGTTCGGAACTGCAAGCTGACACCAGCTGATGTGGAGTTCATCCAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp ACGCTCTGGCCCAAATACAAAACTCAGTGGCAGAGTTaGGCGAAGGCAGGTGGAGCGTCCAGGAGAACTATG +
Preference number: 6 (lower is better)
Translates to: TLWPKYKTQWQS*AKAGGASRRTM
Trigger: CATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CAA 72 bp CCTAACGCTCTGCTTGGTGATCCATCCCGGGATGATTaGCTCTCCCAAGGCTTCAGTTACCGCCTGTTCACA +
Preference number: 6 (lower is better)
Translates to: PNALLGDPSRDD*LSQGFSYRLFT
Trigger: TGTGAACAGGCGGTAACTGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp ATCTGTGTAGTCCCGTTCTGTCTAGGCCTCCCTCCAGAGCAGAGCTaGTTTGGTCAGGCTGAGGGGCACATCTGTTTGGTGAGGATTTCT +
Preference number: 6 (lower is better)
Translates to: ICVVPFCLGLPPEQS*FGQAEGHICLVRIS
Trigger: AGAAATCCTCACCAAACAGATGTGCCCCTCAGCCTGACCAAACAAGCTCTGCTCTGGAGGGAGGCCTAGACAGAACGGGACTACACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp TGTTGCTATCTGTGTACTTGGGAGAGTGCAGGAAGATaGGCAAGTTCTGCCGTAGGTACCATGCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: CCYLCTWESAGR*ASSAVGTMPGL
Trigger: CAGCCCTGGCATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACACAGATAGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GGCTGGTGCTATAGAAAAGGAGGAGGGATAAGAGGATaGGGCAGGCTAGTGGCATGCAGTCATGGTGATCAG +
Preference number: 6 (lower is better)
Translates to: GWCYRKGGGIRG*GRLVACSHGDQ
Trigger: CTGATCACCATGACTGCATGCCACTAGCCTGCCTCATCCTCTTATCCCTCCTCCTTTTCTATAGCACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 72 bp TCAGCCTCTCCTTGCTCCTCAAAGGGTGCAGCACAGTaGCAGACAAGCAGAGACACATCAAAGTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: SASPCSSKGAAQ*QTSRDTSKSSW
Trigger: CCAGGATGACTTTGATGTGTCTCTGCTTGTCTGTCACTGTGCTGCACCCTTTGAGGAGCAAGGAGAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp GGGGATTGGAAGGCACTGTGCGGAAGTGGAGACGACTaGTCTCTAGGAACTTCTCCTGTTGTGGGGTTTAGA +
Preference number: 6 (lower is better)
Translates to: GDWKALCGSGDD*SLGTSPVVGFR
Trigger: TCTAAACCCCACAACAGGAGAAGTTCCTAGAGATCAGTCGTCTCCACTTCCGCACAGTGCCTTCCAATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478140.1
CDS TCA 72 bp AAAGTCCAAGGGGTCCTTTCTGGGGCTCCAGCCTACTaGCAAAGTTCTGACAGCTCCTTGGGTTGTCAGTTC +
Preference number: 6 (lower is better)
Translates to: KVQGVLSGAPAY*QSSDSSLGCQF
Trigger: GAACTGACAACCCAAGGAGCTGTCAGAACTTTGTCAGTAGGCTGGAGCCCCAGAAAGGACCCCTTGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp ACGCTTGCTTCACCAGCTCCCATACGGGTACCACACTaGGGCTCCTTTATGCTGTGCACCTCTTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: TLASPAPIRVPH*GSFMLCTSSFF
Trigger: GAAGAAAGAAGAGGTGCACAGCATAAAGGAGCCTCAGTGTGGTACCCGTATGGGAGCTGGTGAAGCAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS GCA 72 bp AATCATTTTGCAAGGGAGGAAACAGACCCACAAAGCTaGCACTGTGAGTGGCAAGGCTGGGCTTGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: NHFAREETDPQS*HCEWQGWAWSP
Trigger: TGGACTCCAAGCCCAGCCTTGCCACTCACAGTGGCAGCTTTGTGGGTCTGTTTCCTCCCTTGCAAAATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS GCA 72 bp ATAGCAGTGAATCAATCACTGGGCCAGCCCGCCTACTaGATTACTCTACTGCCCAGCAAATGGGACATGGAG +
Preference number: 6 (lower is better)
Translates to: IAVNQSLGQPAY*ITLLPSKWDME
Trigger: CTCCATGTCCCATTTGCTGGGCAGTAGAGTAATGCAGTAGGCGGGCTGGCCCAGTGATTGATTCACTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp ACCTGTCCTTTACAGCAGTGCTTTCACGCCTCAGTGTaGACACAAATCACCTGGGGAGACTGTCAACCTGCA +
Preference number: 6 (lower is better)
Translates to: TCPLQQCFHASV*TQITWGDCQPA
Trigger: TGCAGGTTGACAGTCTCCCCAGGTGATTTGTGTGCACACTGAGGCGTGAAAGCACTGCTGTAAAGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp AATGGAAGAGACGGAATTCTCAAGAGCAGTTCTGGATaGCGAGGCTCCACGCTTGCTTCACCAGCTCCCATA +
Preference number: 6 (lower is better)
Translates to: NGRDGILKSSSG*RGSTLASPAPI
Trigger: TATGGGAGCTGGTGAAGCAAGCGTGGAGCCTCGGCATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp ATACAAAACTCAGTGGCAGAGTTTGGCGAAGGCAGGTaGAGCGTCCAGGAGAACTATGGATATGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: IQNSVAEFGEGR*SVQENYGYGQL
Trigger: CAGCTGCCCATATCCATAGTTCTCCTGGACGCTCCACCTGCCTTCGCCAAACTCTGCCACTGAGTTTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
CDS CCA 72 bp GCGGAACTCCTCCTTGAATTGTGTGAGGGAACGCTCTaGCCCAAATACAAAACTCAGTGGCAGAGTTTGGCG +
Preference number: 6 (lower is better)
Translates to: AELLLELCEGTL*PKYKTQWQSLA
Trigger: CGCCAAACTCTGCCACTGAGTTTTGTATTTGGGCCAGAGCGTTCCCTCACACAATTCAAGGAGGAGTTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp AGGCTCCTCCCCTCTGGATTTCTCTTACTTGGGAACTaGCCCGCTTGTTCTCACTCTCCCAAACTCCTCATT +
Preference number: 6 (lower is better)
Translates to: RLLPSGFLLLGN*PACSHSPKLLI
Trigger: AATGAGGAGTTTGGGAGAGTGAGAACAAGCGGGCCAGTTCCCAAGTAAGAGAAATCCAGAGGGGAGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp TCCCTTACCATGACTAGAAATCCCAAAGCAGTCCTGTaGCTGCCTGTCTGGAGGAACAGCCAATCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SLTMTRNPKAVL*LPVWRNSQSEG
Trigger: GCCTTCTGATTGGCTGTTCCTCCAGACAGGCAGCCACAGGACTGCTTTGGGATTTCTAGTCATGGTAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp GTGGGGCCAAGAGAAACCATGAAAAGGGAGCAGGCTTaGACAGAGGTAAACCTGGTGGGAAATGGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: VGPRETMKREQA*TEVNLVGNGRD
Trigger: GTCTCTTCCATTTCCCACCAGGTTTACCTCTGTCCAAGCCTGCTCCCTTTTCATGGTTTCTCTTGGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp TGTGGTGGGAGTGGATGTTGGAAGTGGTTCCGGCTGTaGCTATCTGTGTACTTGGGAGAGTGCAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: CGGSGCWKWFRL*LSVYLGECRKM
Trigger: CATCTTCCTGCACTCTCCCAAGTACACAGATAGCAACAGCCGGAACCACTTCCAACATCCACTCCCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp TGGCCCTCAGGATCTCAAGCCAAGGCTTGTATTCTTGGTGAGTCTTaGAGGGCAGAGCTGCTCAGAGAATCACATGCTGTAGCTCGATGC +
Preference number: 6 (lower is better)
Translates to: WPSGSQAKACILGES*RAELLRESHAVARC
Trigger: GCATCGAGCTACAGCATGTGATTCTCTGAGCAGCTCTGCCCTCAAAGACTCACCAAGAATACAAGCCTTGGCTTGAGATCCTGAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp TGTGCTGCAGGACCCCTCACCTGGCTCCACCTCCTACTTTCTCACTaGAAGTCTTCTCTTGTAATGCCTCCTCTCTTGAACCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: CAAGPLTWLHLLLSH*KSSLVMPPLLNLSS
Trigger: AGAGCTGAGGTTCAAGAGAGGAGGCATTACAAGAGAAGACTTCAAGTGAGAAAGTAGGAGGTGGAGCCAGGTGAGGGGTCCTGCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp TTGTCTTGTCGTCCCCTTATGTCCATCTGCTCCCTAACGCTCTGCTaGGTGATCCATCCCGGGATGATTTGCTCTCCCAAGGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: LSCRPLMSICSLTLC*VIHPGMICSPKASV
Trigger: AACTGAAGCCTTGGGAGAGCAAATCATCCCGGGATGGATCACCAAGCAGAGCGTTAGGGAGCAGATGGACATAAGGGGACGACAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS TCA 72 bp ATATGCCACCCACCCGAGATGAGAGCAGTAGTGAACTaGTGCCTATGCAGGAATCCTGGCTCTGTCACTTAC +
Preference number: 6 (lower is better)
Translates to: ICHPPEMRAVVN*CLCRNPGSVTY
Trigger: GTAAGTGACAGAGCCAGGATTCCTGCATAGGCATCAGTTCACTACTGCTCTCATCTCGGGTGGGTGGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS GCA 72 bp GATGTACTGGACAACACAGGTGTGCTTCTCTTCAGCTaGAGCCTGCCCTGGTGGTTCATTCTGAATTGGAAG +
Preference number: 6 (lower is better)
Translates to: DVLDNTGVLLFS*SLPWWFILNWK
Trigger: CTTCCAATTCAGAATGAACCACCAGGGCAGGCTGCAGCTGAAGAGAAGCACACCTGTGTTGTCCAGTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS GCA 72 bp TGGTTCCGGCTGTTGCTATCTGTGTACTTGGGAGAGTaGAGGAAGATGAGCAAGTTCTGCCGTAGGTACCAT +
Preference number: 6 (lower is better)
Translates to: WFRLLLSVYLGE*RKMSKFCRRYH
Trigger: ATGGTACCTACGGCAGAACTTGCTCATCTTCCTGCACTCTCCCAAGTACACAGATAGCAACAGCCGGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471177.1
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp AGTGTGCCTCTCACCGCAGTAATATTCAGGGTTCAGTaGTTCCCCACTGCGCAGGAAGGAATAGAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SVPLTAVIFRVQ*FPTAQEGIEEK
Trigger: TTTCTCCTCTATTCCTTCCTGCGCAGTGGGGAAGCACTGAACCCTGAATATTACTGCGGTGAGAGGCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639852.1
CDS GCA 72 bp GGGTCCAAAGGCAGCCCTAACCAGAGGGCAGAAACATaGAGCTTCCATGGGTCAGTAGGACACTTAACTTAT +
Preference number: 6 (lower is better)
Translates to: GSKGSPNQRAET*SFHGSVGHLTY
Trigger: ATAAGTTAAGTGTCCTACTGACCCATGGAAGCTGCATGTTTCTGCCCTCTGGTTAGGGCTGCCTTTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS GCA 72 bp ACCACCACAGTTCTCTCTACCTGTCCTTTACAGCAGTaGTTTCACGCCTCAGTGTGCACACAAATCACCTGG +
Preference number: 6 (lower is better)
Translates to: TTTVLSTCPLQQ*FHASVCTQITW
Trigger: CCAGGTGATTTGTGTGCACACTGAGGCGTGAAAGCACTGCTGTAAAGGACAGGTAGAGAGAACTGTGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CCA 72 bp TGTGCCAATGGGAAAACCCAGGCGAAGAACCATGCATaGGGCCTTGGAAATGATACGGACCATGTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: CANGKTQAKNHA*GLGNDTDHVEG
Trigger: TCCTTCTACATGGTCCGTATCATTTCCAAGGCCCCATGCATGGTTCTTCGCCTGGGTTTTCCCATTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp GGCAGAAGCAGACTCTTAGGAAGACAGATCATGGCCTaGTGCCCCTTCAGTGATCTCTCCTCTTCTGTATTC +
Preference number: 6 (lower is better)
Translates to: GRSRLLGRQIMA*CPFSDLSSSVF
Trigger: GAATACAGAAGAGGAGAGATCACTGAAGGGGCACCAGGCCATGATCTGTCTTCCTAAGAGTCTGCTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp TGTCTGGAGGAACAGCCAATCAGAAGGCAATTCTACTaGCCTTCAGGCTCCTCCCCTCTGGATTTCTCTTAC +
Preference number: 6 (lower is better)
Translates to: CLEEQPIRRQFY*PSGSSPLDFSY
Trigger: GTAAGAGAAATCCAGAGGGGAGGAGCCTGAAGGCCAGTAGAATTGCCTTCTGATTGGCTGTTCCTCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp TACTATCCTACCAGGGCCTCCTCCTTACTTCATTCTTaGACTCCTCAAGGTCTCCTTAGTCCCCAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: YYPTRASSLLHS*TPQGLLSPQVL
Trigger: GAGCACTTGGGGACTAAGGAGACCTTGAGGAGTCCAAGAATGAAGTAAGGAGGAGGCCCTGGTAGGATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638642.1
CDS CCA 72 bp GGAGCAGGCTTGGACAGAGGTAAACCTGGTGGGAAATaGAAGAGACGGAATTCTCAAGAGCAGTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: GAGLDRGKPGGK*KRRNSQEQFWM
Trigger: CATCCAGAACTGCTCTTGAGAATTCCGTCTCTTCCATTTCCCACCAGGTTTACCTCTGTCCAAGCCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp CAGAAGAGAGTTACACACGTGGCTGTCATGAAGGTCTaGAAGAAGCAGTCGCTGGTTGACCTCCCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: QKRVTHVAVMKV*KKQSLVDLPAD
Trigger: ATCTGCAGGGAGGTCAACCAGCGACTGCTTCTTCAAGACCTTCATGACAGCCACGTGTGTAACTCTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp GATGTCTCTAGGAGCCTGGGAAAGAGCAGCATGTCTTaGGACATGCCTCCTCCCAGGCCATCCTTAATTCAT +
Preference number: 6 (lower is better)
Translates to: DVSRSLGKSSMS*DMPPPRPSLIH
Trigger: ATGAATTAAGGATGGCCTGGGAGGAGGCATGTCCAAAGACATGCTGCTCTTTCCCAGGCTCCTAGAGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp GGACCCCTCACCTGGCTCCACCTCCTACTTTCTCACTaGAAGTCTTCTCTTGTAATGCCTCCTCTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: GPLTWLHLLLSH*KSSLVMPPLLN
Trigger: GTTCAAGAGAGGAGGCATTACAAGAGAAGACTTCAAGTGAGAAAGTAGGAGGTGGAGCCAGGTGAGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp CCCACCTTCCAAGGGCCACATACCGAAGATAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAAACATGTTTTTCCGGTTCACCACAG +
Preference number: 6 (lower is better)
Translates to: PTFQGPHTEDSTQPL*LAPGKQTCFSGSPQ
Trigger: CTGTGGTGAACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTTGGAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp CCATTGGGATTCGGGAACATTCCAGGGCAAACTGTTTaGCACAGAAGTAACAGCCCTGGAATGCCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: PLGFGNIPGQTV*HRSNSPGMPVP
Trigger: TGGAACTGGCATTCCAGGGCTGTTACTTCTGTGTCAAACAGTTTGCCCTGGAATGTTCCCGAATCCCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS TCA 72 bp CTTCGACCCTTTTCAGGTTTCCAGGGAGCCTTCTGGTaGATCAAAGTGGCAGTTTTCTCAGAGAAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LRPFSGFQGAFW*IKVAVFSEKLL
Trigger: CAGCAGCTTCTCTGAGAAAACTGCCACTTTGATTCACCAGAAGGCTCCCTGGAAACCTGAAAAGGGTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS GCA 72 bp AGTGGTACCAGCACAAAACCTATGCTCTGCAGATACTaGACATATTGCTGCAGGAAAGCCAAGCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SGTSTKPMLCRY*TYCCRKAKLSS
Trigger: GGAGCTGAGCTTGGCTTTCCTGCAGCAATATGTGCAGTATCTGCAGAGCATAGGTTTTGTGCTGGTACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000648058.1
ENST00000649403.1
CDS GCA 72 bp GCAGAGCTGCTCAGAGAATCACATGCTGTAGCTCGATaGCCGGTACTGGAAGGGTTTTACATGTATCTGTGT +
Preference number: 6 (lower is better)
Translates to: AELLRESHAVAR*PVLEGFYMYLC
Trigger: ACACAGATACATGTAAAACCCTTCCAGTACCGGGCATCGAGCTACAGCATGTGATTCTCTGAGCAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS GCA 72 bp ATCCCCACTGCTGAGGTAAGAAAAGATTCAGTGACTTaGCTAAGGTTCAACAGGAGCAGTGACCAGGTTGGG +
Preference number: 6 (lower is better)
Translates to: IPTAEVRKDSVT*LRFNRSSDQVG
Trigger: CCCAACCTGGTCACTGCTCCTGTTGAACCTTAGGCAAGTCACTGAATCTTTTCTTACCTCAGCAGTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp ACCATGTTGATGATTCCTTCCCCACTGCAGGCGAAGTaGAATCCTTCAGAAAGTCGGACTTCAGTGAGGATG +
Preference number: 6 (lower is better)
Translates to: TMLMIPSPLQAK*NPSESRTSVRM
Trigger: CATCCTCACTGAAGTCCGACTTTCTGAAGGATTCCACTTCGCCTGCAGTGGGGAAGGAATCATCAACATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470139.1
ENST00000562955.2
ENST00000634258.3
CDS CCA 72 bp TGGGAATCCACTAACTATGGGGACTCTGCTTCGATATaGAGGAGATCCCAGGATGTGCTGAGAGATGCATTC +
Preference number: 6 (lower is better)
Translates to: WESTNYGDSASI*RRSQDVLRDAF
Trigger: GAATGCATCTCTCAGCACATCCTGGGATCTCCTCCATATCGAAGCAGAGTCCCCATAGTTAGTGGATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 90 bp CACTGCAGGATGTCTCTAGGAGCCGAAGATAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAAACATGTTTTTCCGGTTCACCACAG +
Preference number: 6 (lower is better)
Translates to: HCRMSLGAEDSTQPL*LAPGKQTCFSGSPQ
Trigger: CTGTGGTGAACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGCTCCTAGAGACATCCTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 90 bp CTACCCACCTTCCAAGGGCCACATACCGAAGATAGTACACAGCCTTaGTTGCTCGCTCCTGGTAAACAAACATGTTTTTCCGGTTCACCA +
Preference number: 6 (lower is better)
Translates to: LPTFQGPHTEDSTQP*LLAPGKQTCFSGSP
Trigger: TGGTGAACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTTGGAAGGTGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 90 bp ACTGATGCCTATGCAGGAATCCTGGCTCTGTCACTTACTGTGGCCTaGGGCAAGTATTTAACTGGCCTGTGCTTCAGTTTCTTCACCCAT +
Preference number: 6 (lower is better)
Translates to: TDAYAGILALSLTVA*GKYLTGLCFSFFTH
Trigger: ATGGGTGAAGAAACTGAAGCACAGGCCAGTTAAATACTTGCCCAAGGCCACAGTAAGTGACAGAGCCAGGATTCCTGCATAGGCATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS GCA 72 bp AGAAGCAGACTCTTAGGAAGACAGATCATGGCCTGGTaGCCCTTCAGTGATCTCTCCTCTTCTGTATTCTTC +
Preference number: 6 (lower is better)
Translates to: RSRLLGRQIMAW*PFSDLSSSVFF
Trigger: GAAGAATACAGAAGAGGAGAGATCACTGAAGGGGCACCAGGCCATGATCTGTCTTCCTAAGAGTCTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp TCTCGGAAAACCACTGTCAGAGACGTCTTTCCTAAGTaGGAGTCCAGAAACACTAGCACAAAGCAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: SRKTTVRDVFPK*ESRNTSTKQSV
Trigger: CACTGACTGCTTTGTGCTAGTGTTTCTGGACTCCCACTTAGGAAAGACGTCTCTGACAGTGGTTTTCCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460536.1
ENST00000562955.2
ENST00000634258.3
ENST00000638263.1
ENST00000640484.1
ENST00000648058.1
ENST00000649403.1
CDS CCA 72 bp TCTGATTCATCTGTGTCTTCAGGACCTGCTCAGGCCTaGTATAGCTCAGGCTTCATTAAGTGTTTGCCAACC +
Preference number: 6 (lower is better)
Translates to: SDSSVSSGPAQA*YSSGFIKCLPT
Trigger: GGTTGGCAAACACTTAATGAAGCCTGAGCTATACCAGGCCTGAGCAGGTCCTGAAGACACAGATGAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 72 bp CACCTCTTCTTTCTTCTCAAGTCTTCTTCAGAATGGTaGTCTTCCTTTCTTCTCAGCCCCACCTTACCCTGC +
Preference number: 6 (lower is better)
Translates to: HLFFLLKSSSEW*SSFLLSPTLPC
Trigger: GCAGGGTAAGGTGGGGCTGAGAAGAAAGGAAGACCACCATTCTGAAGAAGACTTGAGAAGAAAGAAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CCA 72 bp GTGCACCTCTTCTTTCTTCTCAAGTCTTCTTCAGAATaGTGGTCTTCCTTTCTTCTCAGCCCCACCTTACCC +
Preference number: 6 (lower is better)
Translates to: VHLFFLLKSSSE*WSSFLLSPTLP
Trigger: GGGTAAGGTGGGGCTGAGAAGAAAGGAAGACCACCATTCTGAAGAAGACTTGAGAAGAAAGAAGAGGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp GGATCTCAAGCCAAGGCTTGTATTCTTGGTGAGTCTTaGAGGGCAGAGCTGCTCAGAGAATCACATGCTGTA +
Preference number: 6 (lower is better)
Translates to: GSQAKACILGES*RAELLRESHAV
Trigger: TACAGCATGTGATTCTCTGAGCAGCTCTGCCCTCAAAGACTCACCAAGAATACAAGCCTTGGCTTGAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638263.1
CDS CAA 90 bp AGAGCTCGGGACTTTGGGGACAAACAGCAGAGACAGGATAAGGACTaGGTCAGAGGACTAATAGAAATTTGGTCTGAGGGTACAAACTTG +
Preference number: 6 (lower is better)
Translates to: RARDFGDKQQRQDKD*VRGLIEIWSEGTNL
Trigger: CAAGTTTGTACCCTCAGACCAAATTTCTATTAGTCCTCTGACCAAGTCCTTATCCTGTCTCTGCTGTTTGTCCCCAAAGTCCCGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS TCA 72 bp AGCTTCCATGGGTCAGTAGGACACTTAACTTATGGATaGTCGCACACCCAAATACAGTGCCACACATGGAAC +
Preference number: 6 (lower is better)
Translates to: SFHGSVGHLTYG*SHTQIQCHTWN
Trigger: GTTCCATGTGTGGCACTGTATTTGGGTGTGCGATCATCCATAAGTTAAGTGTCCTACTGACCCATGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS TCA 72 bp AATCTCAACTCTTCACATCAGGAGAAAGACAAGGTCTaGTTCATCTGTGTCTTCAGGACCTGCTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: NLNSSHQEKDKV*FICVFRTCSGL
Trigger: CAGGCCTGAGCAGGTCCTGAAGACACAGATGAATCAGACCTTGTCTTTCTCCTGATGTGAAGAGTTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 72 bp AGGAGATCCCAGGATGTGCTGAGAGATGCATTCTCCTaGAGATATCAGAAACGTTTGTCTACAGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: RRSQDVLRDAFS*RYQKRLSTDLL
Trigger: CAGCAAGTCTGTAGACAAACGTTTCTGATATCTCCAGGAGAATGCATCTCTCAGCACATCCTGGGATCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp ATGCAGCTTCCATGGGTCAGTAGGACACTTAACTTATaGATGATCGCACACCCAAATACAGTGCCACACATG +
Preference number: 6 (lower is better)
Translates to: MQLPWVSRTLNL*MIAHPNTVPHM
Trigger: CATGTGTGGCACTGTATTTGGGTGTGCGATCATCCATAAGTTAAGTGTCCTACTGACCCATGGAAGCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 72 bp GAAGTGATCGGGAACCACCAACCTAAGAATACAAGTTaGATCTCTACCCAAGCTCTCAGTCCCAAGTCTTAC +
Preference number: 6 (lower is better)
Translates to: EVIGNHQPKNTS*ISTQALSPKSY
Trigger: GTAAGACTTGGGACTGAGAGCTTGGGTAGAGATCCAACTTGTATTCTTAGGTTGGTGGTTCCCGATCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp CTGTGTAAAGGCAGAGGCTCTGGAATGGAATGCTGGTaGCTAAGGGTTTCAGGGAAAAATTCTGGAGAGACT +
Preference number: 6 (lower is better)
Translates to: LCKGRGSGMECW*LRVSGKNSGET
Trigger: AGTCTCTCCAGAATTTTTCCCTGAAACCCTTAGCAACCAGCATTCCATTCCAGAGCCTCTGCCTTTACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp CAAGGGCCACATACCGAAGATAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAAACATGTTTTTCCGGT +
Preference number: 6 (lower is better)
Translates to: QGPHTEDSTQPL*LAPGKQTCFSG
Trigger: ACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp AATGTTATGGTTCAGCTTTTCCTCTATCCGTCTGGGTaGGAGGTCATCAGGAGTAAGAGAAGGGAGAAGTGT +
Preference number: 6 (lower is better)
Translates to: NVMVQLFLYPSG*EVIRSKRREKC
Trigger: ACACTTCTCCCTTCTCTTACTCCTGATGACCTCTCACCCAGACGGATAGAGGAAAAGCTGAACCATAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp ATCGTGGAAATGAAGCACTGCTTTCAGATGTTGACCTaGACAGGGTGGGAACAAGTCAAAGGTCAGGAGTTA +
Preference number: 6 (lower is better)
Translates to: IVEMKHCFQMLT*TGWEQVKGQEL
Trigger: TAACTCCTGACCTTTGACTTGTTCCCACCCTGTTCAGGTCAACATCTGAAAGCAGTGCTTCATTTCCACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638642.1
CDS TCA 72 bp TCCAGTGGTCAGAATCAAAGAGATTTACAGGAGCAGTaGAAAAGGCAGGTGTCCAATCAACACCAACTGACC +
Preference number: 6 (lower is better)
Translates to: SSGQNQRDLQEQ*KRQVSNQHQLT
Trigger: GGTCAGTTGGTGTTGATTGGACACCTGCCTTTTTCACTGCTCCTGTAAATCTCTTTGATTCTGACCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS GCA 72 bp AAGGGCCACATACCGAAGATAGTACACAGCCTTTGTTaGTCGCTCCTGGTAAACAAACATGTTTTTCCGGTT +
Preference number: 6 (lower is better)
Translates to: KGHIPKIVHSLC*SLLVNKHVFPV
Trigger: AACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp AGTCTCCCTTCAATCCTTTACCACAATGCCAGTAGATaGGCTAAGGTCCAACTCAATGACAAACCGATACTG +
Preference number: 6 (lower is better)
Translates to: SLPSILYHNASR*AKVQLNDKPIL
Trigger: CAGTATCGGTTTGTCATTGAGTTGGACCTTAGCCCATCTACTGGCATTGTGGTAAAGGATTGAAGGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CCA 72 bp CCAAAAGGAGTGTCTTGTGATAGCCTCCTTGAGTGCTaGATAAGCCCTGTAATTATCTGTGTGGTCAGCATT +
Preference number: 6 (lower is better)
Translates to: PKGVSCDSLLEC*ISPVIICVVSI
Trigger: AATGCTGACCACACAGATAATTACAGGGCTTATCCAGCACTCAAGGAGGCTATCACAAGACACTCCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS CAA 72 bp ATGTCTCTAGGAGCCGAAGATAGTACACAGCCTTTGTaGCTCGCTCCTGGTAAACAAACATGTTTTTCCGGT +
Preference number: 6 (lower is better)
Translates to: MSLGAEDSTQPL*LAPGKQTCFSG
Trigger: ACCGGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGCTCCTAGAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp AGGATGTCTCTAGGAGCCGAAGATAGTACACAGCCTTaGTTGCTCGCTCCTGGTAAACAAACATGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: RMSLGAEDSTQP*LLAPGKQTCFS
Trigger: GGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGCTCCTAGAGACATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000648058.1
ENST00000649403.1
CDS CAA 72 bp TTCCAAGGGCCACATACCGAAGATAGTACACAGCCTTaGTTGCTCGCTCCTGGTAAACAAACATGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: FQGPHTEDSTQP*LLAPGKQTCFS
Trigger: GGAAAAACATGTTTGTTTACCAGGAGCGAGCAACAAAGGCTGTGTACTATCTTCGGTATGTGGCCCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp GACTTTGGGGACAAACAGCAGAGACAGGATAAGGACTaGGTCAGAGGACTAATAGAAATTTGGTCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: DFGDKQQRQDKD*VRGLIEIWSEG
Trigger: ACCCTCAGACCAAATTTCTATTAGTCCTCTGACCAAGTCCTTATCCTGTCTCTGCTGTTTGTCCCCAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS TCA 72 bp AAGAGGATGAGGCAGGCTAGTGGCATGCAGTCATGGTaGTCAGACCCAGAATCTGTTTTATATGGAATCATT +
Preference number: 6 (lower is better)
Translates to: KRMRQASGMQSW*SDPESVLYGII
Trigger: AATGATTCCATATAAAACAGATTCTGGGTCTGATCACCATGACTGCATGCCACTAGCCTGCCTCATCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460536.1
ENST00000640484.1
CDS TCA 72 bp TGTCCTAGCTCATCTTCAATTTGCAGAAGATGCCTTTaGAACCATGGGAATCCACTAACTATGGGGACTCTG +
Preference number: 6 (lower is better)
Translates to: CPSSSSICRRCL*NHGNPLTMGTL
Trigger: CAGAGTCCCCATAGTTAGTGGATTCCCATGGTTTCAAAGGCATCTTCTGCAAATTGAAGATGAGCTAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS TCA 72 bp ATAGAAATTTGGTCTGAGGGTACAAACTTGGAGAGATaGTGCAATACCTGGTGGGACTGCAGTCCAATGATG +
Preference number: 6 (lower is better)
Translates to: IEIWSEGTNLER*CNTWWDCSPMM
Trigger: CATCATTGGACTGCAGTCCCACCAGGTATTGCATCATCTCTCCAAGTTTGTACCCTCAGACCAAATTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS GCA 72 bp ACTTCATTAATTCCACATTGGGCACATGGCCAAAACTaGAGTCATAAGAGTAAACTCCTCCCACCTGGACAA +
Preference number: 6 (lower is better)
Translates to: TSLIPHWAHGQN*SHKSKLLPPGQ
Trigger: TTGTCCAGGTGGGAGGAGTTTACTCTTATGACTGCAGTTTTGGCCATGTGCCCAATGTGGAATTAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562955.2
ENST00000634258.3
ENST00000639852.1
CDS CCA 72 bp ACTTTTAAACCAGAGGAGAACTGCAAAGGAATGTTATaGTTCAGCTTTTCCTCTATCCGTCTGGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: TFKPEENCKGML*FSFSSIRLGER
Trigger: CCTCTCACCCAGACGGATAGAGGAAAAGCTGAACCATAACATTCCTTTGCAGTTCTCCTCTGGTTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp AGTTGCAACAGTAATCTCATTAAAACCAAAAGGGTATaGCTGCTTATGCACACCAGCTGCAGAGGAGGGATA +
Preference number: 6 (lower is better)
Translates to: SCNSNLIKTKRV*LLMHTSCRGGI
Trigger: TATCCCTCCTCTGCAGCTGGTGTGCATAAGCAGCCATACCCTTTTGGTTTTAATGAGATTACTGTTGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp TCTGTCACTTACTGTGGCCTTGGGCAAGTATTTAACTaGCCTGTGCTTCAGTTTCTTCACCCATATGATAAG +
Preference number: 6 (lower is better)
Translates to: SVTYCGLGQVFN*PVLQFLHPYDK
Trigger: CTTATCATATGGGTGAAGAAACTGAAGCACAGGCCAGTTAAATACTTGCCCAAGGCCACAGTAAGTGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 90 bp AGACCCTTAGATCATGTTCCCAATATCTTATCTCTCAAATCCAGTTaGATAGCTAAGGTGACAATGCAGCCATCACGGACAGTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: RPLDHVPNILSLKSS*IAKVTMQPSRTVSG
Trigger: CCCTGAAACTGTCCGTGATGGCTGCATTGTCACCTTAGCTATCAAACTGGATTTGAGAGATAAGATATTGGGAACATGATCTAAGGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS GCA 72 bp GTCAGTAGCACTCTAACACTATGTCCTCCAGGGAGTTaGAACAGTAATCTCATTAAAACCAAAAGGGTATGG +
Preference number: 6 (lower is better)
Translates to: VSSTLTLCPPGS*NSNLIKTKRVW
Trigger: CCATACCCTTTTGGTTTTAATGAGATTACTGTTGCAACTCCCTGGAGGACATAGTGTTAGAGTGCTACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CCA 72 bp AAGACAGTTGAATGTGATGTGCTTAGCTGTAAGATGTaGGAAGTGATCGGGAACCACCAACCTAAGAATACA +
Preference number: 6 (lower is better)
Translates to: KTVECDVLSCKM*EVIGNHQPKNT
Trigger: TGTATTCTTAGGTTGGTGGTTCCCGATCACTTCCCACATCTTACAGCTAAGCACATCACATTCAACTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp AGAGAAGGGAGAAGTGTCGAGACTTCAGTTACCATCTaGAGTGGATTATCATGTTCCCTTACCATGACTAGA +
Preference number: 6 (lower is better)
Translates to: REGRSVETSVTI*SGLSCSLTMTR
Trigger: TCTAGTCATGGTAAGGGAACATGATAATCCACTCAAGATGGTAACTGAAGTCTCGACACTTCTCCCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp TCCCCATCAGCTTTTCGACTCTCATCTATAAGACAGTaGAATGTGATGTGCTTAGCTGTAAGATGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: SPSAFRLSSIRQ*NVMCLAVRCGK
Trigger: CTTCCCACATCTTACAGCTAAGCACATCACATTCAACTGTCTTATAGATGAGAGTCGAAAAGCTGATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 90 bp TCAGGAGTAAGAGAAGGGAGAAGTGTCGAGACTTCAGTTACCATCTaGAGTGGATTATCATGTTCCCTTACCATGACTAGAAATCCCAAA +
Preference number: 6 (lower is better)
Translates to: SGVREGRSVETSVTI*SGLSCSLTMTRNPK
Trigger: TTTGGGATTTCTAGTCATGGTAAGGGAACATGATAATCCACTCAAGATGGTAACTGAAGTCTCGACACTTCTCCCTTCTCTTACTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639197.1
CDS CAA 72 bp GATCATGTTCCCAATATCTTATCTCTCAAATCCAGTTaGATAGCTAAGGTGACAATGCAGCCATCACGGACA +
Preference number: 6 (lower is better)
Translates to: DHVPNILSLKSS*IAKVTMQPSRT
Trigger: TGTCCGTGATGGCTGCATTGTCACCTTAGCTATCAAACTGGATTTGAGAGATAAGATATTGGGAACATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638631.1
CDS TCA 72 bp TGCTTTATTTTTATACACGAACTTCTAAAGCTGCTCTaGTCCTTAGATGTTGTTAATGCTCAGCGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: CFIFIHELLKLL*SLDVVNAQREA
Trigger: GGCTTCTCGCTGAGCATTAACAACATCTAAGGATCAGAGCAGCTTTAGAAGTTCGTGTATAAAAATAAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648058.1
CDS CAA 72 bp TTCTCCTGGAGATATCAGAAACGTTTGTCTACAGACTaGCTGAGAATGTTAAAAATAAGGAGTGGTCTGATT +
Preference number: 6 (lower is better)
Translates to: FSWRYQKRLSTD*LRMLKIRSGLI
Trigger: AATCAGACCACTCCTTATTTTTAACATTCTCAGCAAGTCTGTAGACAAACGTTTCTGATATCTCCAGGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639197.1