Pregenerated sensors for SZRD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000055070Ensembl transcript IDs: ENST00000471507.5, ENST00000475078.1, ENST00000475554.5, ENST00000476423.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGCGCGCCTCCGTCGCGGGCGCAGGCACGCAAGGCTTTACTCAATaGACCCCGCCCGCTGCCAAGCCCGGAAGAGGCGCCAGGCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: KRASVAGAGTQGFTQ*TPPAAKPGRGARQG Trigger: ACCTTGCCTGGCGCCTCTTCCGGGCTTGGCAGCGGGCGGGGTCCATTGAGTAAAGCCTTGCGTGCCTGCGCCCGCGACGGAGGCGCGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471507.5 |
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| CDS GCA 90 bp | CGGGAAAACCACCCAGTTGCCCCAGACAGTGCAGCGGAGGGTGGGTaGGGCTATCAGGTCGACGCTAGAGACGCGGCGAAGGCGGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: RENHPVAPDSAAEGG*GYQVDARDAAKAGA Trigger: CGCACCCGCCTTCGCCGCGTCTCTAGCGTCGACCTGATAGCCGCACCCACCCTCCGCTGCACTGTCTGGGGCAACTGGGTGGTTTTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS GCA 90 bp | CGCGGGCGCAGGCACGCAAGGCTTTACTCAATGGACCCCGCCCGCTaGCAAGCCCGGAAGAGGCGCCAGGCAAGGTCCCAAGTGTACATT | + |
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Preference number: 5 (lower is better) Translates to: RGRRHARLYSMDPAR*QARKRRQARSQVYI Trigger: AATGTACACTTGGGACCTTGCCTGGCGCCTCTTCCGGGCTTGGCAGCGGGCGGGGTCCATTGAGTAAAGCCTTGCGTGCCTGCGCCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471507.5 |
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| CDS GCA 90 bp | CCTGGGGAAGTGAAGGGGCTGCAGGGCACCAAAGAGCACTTGCCCTaGCTAATGACGGCCAACAAGCTTTGGCAGACAGGGCCAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: PGEVKGLQGTKEHLP*LMTANKLWQTGPDP Trigger: GGGATCTGGCCCTGTCTGCCAAAGCTTGTTGGCCGTCATTAGGCAGGGCAAGTGCTCTTTGGTGCCCTGCAGCCCCTTCACTTCCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS GCA 90 bp | CCGTCATGGCCTGAACCAGTCTCTCAGGTTGGTTACATTTTAGACTaGCCTGGCATCCGCCACAGCCCTCTCTGCTCATCGGGCCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: PSWPEPVSQVGYILD*PGIRHSPLCSSGPR Trigger: CCGAGGGCCCGATGAGCAGAGAGGGCTGTGGCGGATGCCAGGGCAGTCTAAAATGTAACCAACCTGAGAGACTGGTTCAGGCCATGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS CCA 90 bp | CATAGACCAGGCAAGCAGCCAAACTCCACTCGCACGGAGCATACCTaGGGAAGTGAAGGGGCTGCAGGGCACCAAAGAGCACTTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: HRPGKQPNSTRTEHT*GSEGAAGHQRALAL Trigger: CAGGGCAAGTGCTCTTTGGTGCCCTGCAGCCCCTTCACTTCCCCAGGTATGCTCCGTGCGAGTGGAGTTTGGCTGCTTGCCTGGTCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS GCA 90 bp | TCCTGGCTAAATGTTAGTCTCAAACCACCGGGAAAACCACCCAGTTaGCCCAGACAGTGCAGCGGAGGGTGGGTGCGGCTATCAGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SWLNVSLKPPGKPPS*PRQCSGGWVRLSGR Trigger: TCGACCTGATAGCCGCACCCACCCTCCGCTGCACTGTCTGGGGCAACTGGGTGGTTTTCCCGGTGGTTTGAGACTAACATTTAGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS CCA 90 bp | GCTGAAGGATGTAATGAGGCATGTCTCATGTCCTGCTTCCCGTCATaGCCTGAACCAGTCTCTCAGGTTGGTTACATTTTAGACTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: AEGCNEACLMSCFPS*PEPVSQVGYILDCP Trigger: AGGGCAGTCTAAAATGTAACCAACCTGAGAGACTGGTTCAGGCCATGACGGGAAGCAGGACATGAGACATGCCTCATTACATCCTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS CCA 72 bp | TCCGTCGCGGGCGCAGGCACGCAAGGCTTTACTCAATaGACCCCGCCCGCTGCCAAGCCCGGAAGAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SVAGAGTQGFTQ*TPPAAKPGRGA Trigger: GGCGCCTCTTCCGGGCTTGGCAGCGGGCGGGGTCCATTGAGTAAAGCCTTGCGTGCCTGCGCCCGCGACGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471507.5 |
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| CDS GCA 72 bp | CACCCAGTTGCCCCAGACAGTGCAGCGGAGGGTGGGTaGGGCTATCAGGTCGACGCTAGAGACGCGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: HPVAPDSAAEGG*GYQVDARDAAK Trigger: CTTCGCCGCGTCTCTAGCGTCGACCTGATAGCCGCACCCACCCTCCGCTGCACTGTCTGGGGCAACTGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS GCA 72 bp | AGGCACGCAAGGCTTTACTCAATGGACCCCGCCCGCTaGCAAGCCCGGAAGAGGCGCCAGGCAAGGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RHARLYSMDPAR*QARKRRQARSQ Trigger: TTGGGACCTTGCCTGGCGCCTCTTCCGGGCTTGGCAGCGGGCGGGGTCCATTGAGTAAAGCCTTGCGTGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471507.5 |
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| CDS CCA 72 bp | GAGCACTTGCCCTGCCTAATGACGGCCAACAAGCTTTaGCAGACAGGGCCAGATCCCGCTGTCTGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: EHLPCLMTANKL*QTGPDPAVCRL Trigger: GAGGCGGCAGACAGCGGGATCTGGCCCTGTCTGCCAAAGCTTGTTGGCCGTCATTAGGCAGGGCAAGTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS CCA 72 bp | GGCAAGCAGCCAAACTCCACTCGCACGGAGCATACCTaGGGAAGTGAAGGGGCTGCAGGGCACCAAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GKQPNSTRTEHT*GSEGAAGHQRA Trigger: TGCTCTTTGGTGCCCTGCAGCCCCTTCACTTCCCCAGGTATGCTCCGTGCGAGTGGAGTTTGGCTGCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS CAA 72 bp | AGAGCACTTGCCCTGCCTAATGACGGCCAACAAGCTTaGGCAGACAGGGCCAGATCCCGCTGTCTGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RALALPNDGQQA*ADRARSRCLPP Trigger: AGGCGGCAGACAGCGGGATCTGGCCCTGTCTGCCAAAGCTTGTTGGCCGTCATTAGGCAGGGCAAGTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS GCA 72 bp | GTGAAGGGGCTGCAGGGCACCAAAGAGCACTTGCCCTaGCTAATGACGGCCAACAAGCTTTGGCAGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: VKGLQGTKEHLP*LMTANKLWQTG Trigger: CCCTGTCTGCCAAAGCTTGTTGGCCGTCATTAGGCAGGGCAAGTGCTCTTTGGTGCCCTGCAGCCCCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS CAA 72 bp | GGGGAAGTGAAGGGGCTGCAGGGCACCAAAGAGCACTaGCCCTGCCTAATGACGGCCAACAAGCTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GEVKGLQGTKEH*PCLMTANKLWQ Trigger: CTGCCAAAGCTTGTTGGCCGTCATTAGGCAGGGCAAGTGCTCTTTGGTGCCCTGCAGCCCCTTCACTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS GCA 72 bp | AATGTTAGTCTCAAACCACCGGGAAAACCACCCAGTTaGCCCAGACAGTGCAGCGGAGGGTGGGTGCGGCTA | + |
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Preference number: 6 (lower is better) Translates to: NVSLKPPGKPPS*PRQCSGGWVRL Trigger: TAGCCGCACCCACCCTCCGCTGCACTGTCTGGGGCAACTGGGTGGTTTTCCCGGTGGTTTGAGACTAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS GCA 72 bp | CCTGAACCAGTCTCTCAGGTTGGTTACATTTTAGACTaGCCTGGCATCCGCCACAGCCCTCTCTGCTCATCG | + |
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Preference number: 6 (lower is better) Translates to: PEPVSQVGYILD*PGIRHSPLCSS Trigger: CGATGAGCAGAGAGGGCTGTGGCGGATGCCAGGGCAGTCTAAAATGTAACCAACCTGAGAGACTGGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS TCA 72 bp | TTATGTTTGTGGCTTTGGAGGTCCATGGTCTACAAGTaGACATGGGGAACCCCGCTGTCTGCCGCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LCLWLWRSMVYK*TWGTPLSAASS Trigger: GGAAGAGGCGGCAGACAGCGGGGTTCCCCATGTTCACTTGTAGACCATGGACCTCCAAAGCCACAAACATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475554.5 |
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| CDS CCA 72 bp | AAACCTATGCCTTATGTTTGTGGCTTTGGAGGTCCATaGTCTACAAGTGAACATGGGGAACCCCGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KPMPYVCGFGGP*STSEHGEPRCL Trigger: CAGACAGCGGGGTTCCCCATGTTCACTTGTAGACCATGGACCTCCAAAGCCACAAACATAAGGCATAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475554.5 |
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| CDS CCA 72 bp | TGTAATGAGGCATGTCTCATGTCCTGCTTCCCGTCATaGCCTGAACCAGTCTCTCAGGTTGGTTACATTTTA | + |
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Preference number: 6 (lower is better) Translates to: CNEACLMSCFPS*PEPVSQVGYIL Trigger: TAAAATGTAACCAACCTGAGAGACTGGTTCAGGCCATGACGGGAAGCAGGACATGAGACATGCCTCATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS TCA 72 bp | AACAGAGCCTTGACAGCTGTAGAATTTAGAAGCCTTTaGGGGTTGAGACCAAATGCCTTCATAGACCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NRALTAVEFRSL*GLRPNAFIDQA Trigger: TGCCTGGTCTATGAAGGCATTTGGTCTCAACCCTCAAAGGCTTCTAAATTCTACAGCTGTCAAGGCTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476423.5 |
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| CDS CAA 90 bp | TTTGGGAGGAGATTTGGATTTCCTGCAGTCTTAAGGTCTGTTGTGTaGATGTCAATGCTGAAGGATGTAATGAGGCATGTCTCATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FGRRFGFPAVLRSVV*MSMLKDVMRHVSCP Trigger: AGGACATGAGACATGCCTCATTACATCCTTCAGCATTGACATCAACACAACAGACCTTAAGACTGCAGGAAATCCAAATCTCCTCCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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| CDS CAA 72 bp | AGATTTGGATTTCCTGCAGTCTTAAGGTCTGTTGTGTaGATGTCAATGCTGAAGGATGTAATGAGGCATGTC | + |
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Preference number: 6 (lower is better) Translates to: RFGFPAVLRSVV*MSMLKDVMRHV Trigger: GACATGCCTCATTACATCCTTCAGCATTGACATCAACACAACAGACCTTAAGACTGCAGGAAATCCAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475078.1 |
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