RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYVN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162298

Ensembl transcript IDs: ENST00000294256.12, ENST00000307289.10, ENST00000377190.8, ENST00000449943.5, ENST00000525874.1, ENST00000526060.5, ENST00000526121.5, ENST00000527142.5, ENST00000527765.1, ENST00000528487.1, ENST00000529207.5, ENST00000530451.1, ENST00000531018.5, ENST00000532771.5, ENST00000533685.1

Found 702 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAGA +
Preference number: 1 (lower is better)
Translates to: AFLGRWDCSGQEQAH*PLPGVRLGSGCWVR
Trigger: TCTCACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR TCA 90 bp CGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTaGGACAGGTCAGTCTCACTTGAGAAGCTGCAGAGGAAAGGGGCC +
Preference number: 1 (lower is better)
Translates to: RTGPCLECGWAVAAG*DRSVSLEKLQRKGA
Trigger: GGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp TTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTaGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: FCQLRSGLPWALGLQ*SGAGALALAWSAAG
Trigger: CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp TCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGTCAGTCTCACTTGAGAAGCTGCAGA +
Preference number: 1 (lower is better)
Translates to: SGAGALALAWSAAGQ*LLGETGQSHLRSCR
Trigger: TCTGCAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp GGGGTACTACTCCCTGGTGCAGACAGAGAGGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: GVLLPGADREGAGTW*QDMFQRGLLKRAEA
Trigger: AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp CTGGGGGTACTACTCCCTGGTGCAGACAGAGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAG +
Preference number: 1 (lower is better)
Translates to: LGVLLPGADREGAGT*WQDMFQRGLLKRAE
Trigger: CTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp CTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACAGAGAGGGAGCTaGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAG +
Preference number: 1 (lower is better)
Translates to: LRAGGTTPWCRQRGS*HLVAGHVPARAAQK
Trigger: CTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCCAGCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTaGTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTT +
Preference number: 1 (lower is better)
Translates to: PRGCRLFLRAGGTTP*CRQRGSWHLVAGHV
Trigger: AACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp AGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACGGGAGCTAATACTGTTCGGCACTGC +
Preference number: 1 (lower is better)
Translates to: RGGPASKFIACLQPL*SPHLGTGANTVRHC
Trigger: GCAGTGCCGAACAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp GCTGAAGAGTTGGAGAGGAAGGCTGGAACTGACCCGAGATCCCCATaGCTGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: AEELERKAGTDPRSP*LPGTGVKWEPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTCTCCAACTCTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 90 bp CTCTGGAGTCCACACTTGGGAACGGGAGCTAATACTGTTCGGCACTaGAGTGTGACTCCGCACATACAAGTAGGGCTTGGAGGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LWSPHLGTGANTVRH*SVTPHIQVGLGGAA
Trigger: GGCTGCCCCTCCAAGCCCTACTTGTATGTGCGGAGTCACACTGCAGTGCCGAACAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 90 bp ATGGGTACCAGTCTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGTCCACACTTGGGAACGGGAGCTAAT +
Preference number: 1 (lower is better)
Translates to: MGTSLRGGPASKFIA*LQPLWSPHLGTGAN
Trigger: ATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAGACTGGTACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 90 bp AAGAGTTGGAGAGGAAGGCTGGAACTGACCCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTT +
Preference number: 1 (lower is better)
Translates to: KSWRGRLELTRDPHG*LGLESNGNPSLFPL
Trigger: AAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTCTCCAACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp TGGGGGAAGAAGAGGGCTTCTCAGAGGCTAAACCTTCTGCCTTCATaGCCCCAGCAGAACACAGGGCTGAAGAGTTGGAGAGGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: WGKKRASQRLNLLPS*PQQNTGLKSWRGRL
Trigger: CAGCCTTCCTCTCCAACTCTTCAGCCCTGTGTTCTGCTGGGGCCATGAAGGCAGAAGGTTTAGCCTCTGAGAAGCCCTCTTCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp ATGCCACAGGGCATAGGGGGCACAGCCACCACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCAGTCTTAGGG +
Preference number: 1 (lower is better)
Translates to: MPQGIGGTATTTRGF*GDQGKKRKWVPVLG
Trigger: CCCTAAGACTGGTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGGCTGTGCCCCCTATGCCCTGTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 90 bp CTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTCATGAAGGCCATGTACAGCAGAACC +
Preference number: 1 (lower is better)
Translates to: LMARYMGRMAKSGKV*TLIMMVMKAMYSRT
Trigger: GGTTCTGCTGTACATGGCCTTCATGACCATCATGATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
3UTR CCA 90 bp AATTCTAAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTT +
Preference number: 1 (lower is better)
Translates to: NSKLQKFCQLRSGLP*ALGLQWSGAGALAL
Trigger: AAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTTAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 90 bp CTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGATCATGATGGTCATGAAGGCCATGTA +
Preference number: 1 (lower is better)
Translates to: LELSHGQVHGPDGKE*EGVHLDHDGHEGHV
Trigger: TACATGGCCTTCATGACCATCATGATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
3UTR CCA 90 bp CCTCCTTGGCACAGAGCCTTTTCTAAACTGGAAAGACCAGGAGTCTaGCACTCCTGTTCCTCTTTCCCGGGATTAAGCATTCAACTTCAA +
Preference number: 1 (lower is better)
Translates to: PPWHRAFSKLERPGV*HSCSSFPGLSIQLQ
Trigger: TTGAAGTTGAATGCTTAATCCCGGGAAAGAGGAACAGGAGTGCCAGACTCCTGGTCTTTCCAGTTTAGAAAAGGCTCTGTGCCAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR TCA 90 bp AGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTaGGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: SKEVIPILNFRSSAS*EVAFLGRWDCSGQE
Trigger: CTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 90 bp CTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAGACAGGTC +
Preference number: 2 (lower is better)
Translates to: LGRWDCSGQEQAHWP*PGVRLGSGCWVRQV
Trigger: GACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGAGTW*QDMFQR
Trigger: TCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGAGTW*QDMFQR
Trigger: TCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 2 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVEGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPEGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: LGLQWSGAGALALAWSAAQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGACAGGGCTGAAGAGTTaGAGAGGAAGGCTGGAACTG +
Preference number: 2 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWTGLKS*RGRLEL
Trigger: CAGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCATACAAGTAGGGCTTaGAGGGGCAGCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPHTSRA*RGSPFS
Trigger: GGAGAAGGGGCTGCCCCTCCAAGCCCTACTTGTATG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTCTCACTTGAGAAGCTaGAGAGGAAAGGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPSHLRS*RGKGPG
Trigger: CCCAGGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGA...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCCTCTTTCTCAGAGCTaGGGGTACTACTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPPLSQS*GYYSLV
Trigger: CACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: GLQWSGAGALALAWSAAGMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: GLQWSGAGALALAWSAAGIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 90 bp CAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATaGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCG +
Preference number: 2 (lower is better)
Translates to: QKFCQLRSGLPWALG*QWSGAGALALAWSA
Trigger: CGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR TCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: LGLQWSGAGALALAWSAAIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTCTGGAGTCCACACTTaGGAACGGGAGCTAATACTG +
Preference number: 2 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPSGVHT*ERELIL
Trigger: CAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGA...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACG +
Preference number: 2 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGCLQPL*SPHLGT
Trigger: CGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 90 bp GCTGGGGGTACTACTCCCTGGTGCAGACAGAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: AGGTTPWCRQRGSWH*VAGHVPARAAQKSR
Trigger: TCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: GLQWSGAGALALAWSAAGTTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCCTCTTTCTCAGAGCTaGGGGTACTACTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LRGGPASKFIACLQPLWSPLSQS*GYYSLV
Trigger: CACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp ACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TVSWPGTWAGWQRVGRCAQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...TGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
3UTR-3UTR TCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCACAGGGCTGAAGAGTTaGAGAGGAAGGCTGGAACTG +
Preference number: 2 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGTGLKS*RGRLEL
Trigger: CAGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR TCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGAGGAAGGCTGGAACTaGCCCGAGATCCCCATGGCT +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLEEGWN*PEIPMA
Trigger: AGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACG +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLCLQPL*SPHLGT
Trigger: CGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYEGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 90 bp TCCCAGGGGTTCTCACTCTGGAGGTCCACGGAGTGCAGCACATACTaGATGAAGATGGTGAGCACCATCGTCATCAGGATGGCATACTCA +
Preference number: 2 (lower is better)
Translates to: SQGFSLWRSTECSTY*MKMVSTIVIRMAYS
Trigger: TGAGTATGCCATCCTGATGACGATGGTGCTCACCATCTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
3UTR-3UTR GCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACACTTGGCCTAGGGGATaGCGCCTCTTTCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYTWPRG*RLFLRA
Trigger: AGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLRDPHG*LGLESN
Trigger: ATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCCTCTTTCTCAGAGCTaGGGGTACTACTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYPLSQS*GYYSLV
Trigger: CACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR TCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACAATACTGTTCGGCACTaGAGTGTGACTCCGCACATA +
Preference number: 2 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYNTVRH*SVTPHI
Trigger: TATGTGCGGAGTCACACTGCAGTGCCGAACAGTATT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 2 (lower is better)
Translates to: KDTSKEVIPILNFRSSASMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KDTSKEVIPILNFRSSASSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR TCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAGGCATTCCTTTCCCTaGGTTGTGTGGTTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: KDTSKEVIPILNFRSSASRHSFP*VVWLPV
Trigger: TACTGGCAACCACACAACTCAGGGAAAGGAATGCCT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: KDTSKEVIPILNFRSSASTTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KDTSKEVIPILNFRSSASGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp GGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: GRWDCSGQEQAH*PLPGVRLGSGC
Trigger: GCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp GGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGTCAGTCTCACTTGAGA +
Preference number: 3 (lower is better)
Translates to: GALALAWSAAGQ*LLGETGQSHLR
Trigger: TCTCAAGTGAGACTGACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCACAGGGCTGAAGAGTaGGAGAGGAAGGCTGGAACT +
Preference number: 3 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPHRAEE*ERKAGT
Trigger: AGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGTG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCTCTGGAGTCCACACTaGGGAACGGGAGCTAATACT +
Preference number: 3 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPLWSPH*GTGANT
Trigger: AGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp GGGGGTACTACTCCCTGGTGCAGACAGAGAGGGAGCTaGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCT +
Preference number: 3 (lower is better)
Translates to: GGTTPWCRQRGS*HLVAGHVPARA
Trigger: AGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCACAGGTCAGTCTCACTaGAGAAGCTGCAGAGGAAAG +
Preference number: 3 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPTGQSH*RSCRGK
Trigger: CTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 72 bp AGAGGAAGGCTGGAACTGACCCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAATGGGAACCCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: RGRLELTRDPHG*LGLESNGNPSL
Trigger: GAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp TGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTaGTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCA +
Preference number: 3 (lower is better)
Translates to: CRLFLRAGGTTP*CRQRGSWHLVA
Trigger: TGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 3 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 3 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 3 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 3 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp ACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: TGVKWEPQPLST*PRGCRLFLRAG
Trigger: CCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp CTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCA +
Preference number: 3 (lower is better)
Translates to: LQKFCQLRSGLP*ALGLQWSGAGA
Trigger: TGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCACAGGTCAGTCTCACTaGAGAAGCTGCAGAGGAAAG +
Preference number: 3 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGTGQSH*RSCRGK
Trigger: CTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CCA 72 bp CCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACGGGAGCTAATACTGTT +
Preference number: 3 (lower is better)
Translates to: PASKFIACLQPL*SPHLGTGANTV
Trigger: AACAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR GCA 72 bp CCACACTTGGGAACGGGAGCTAATACTGTTCGGCACTaGAGTGTGACTCCGCACATACAAGTAGGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: PHLGTGANTVRH*SVTPHIQVGLG
Trigger: TCCAAGCCCTACTTGTATGTGCGGAGTCACACTGCAGTGCCGAACAGTATTAGCTCCCGTTCCCAAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp GCGAGACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTATACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 3 (lower is better)
Translates to: ARHDGICHSFLELSHGQVYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...TACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
3UTR CCA 72 bp ATGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGCACATACTTGATGAAG +
Preference number: 3 (lower is better)
Translates to: MYTALLSQGFSL*RSTECSTYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
3UTR-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTCAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: KDTSKEVIPILNFRSSASQAHWP*PGVRLG
Trigger: GCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTG...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp ATGGTCATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAAACAGCTCTAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: MVMKAMYSRTLMKPVNSSSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...AGAGCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
3UTR CCA 72 bp CACAGAGCCTTTTCTAAACTGGAAAGACCAGGAGTCTaGCACTCCTGTTCCTCTTTCCCGGGATTAAGCATT +
Preference number: 3 (lower is better)
Translates to: HRAFSKLERPGV*HSCSSFPGLSI
Trigger: AATGCTTAATCCCGGGAAAGAGGAACAGGAGTGCCAGACTCCTGGTCTTTCCAGTTTAGAAAAGGCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: KDTSKEVIPILNFRSSASEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGTGGCCCGGAGACCTGTaGGCACCAGGAGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVWPGDL*APGVAG
Trigger: GCCCGCAACTCCTGGTGCTCACAGGTCTCCGGGCCA...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVRASRC*RSWPSR
Trigger: TCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAGGCGCACTGGCCCTTaGCTGGAGTGCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVRRTGP*LECGWA
Trigger: TGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAGCACCAGGAGTTaGGGGCGTCGCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWVSTRS*GRRRQG
Trigger: GCCCTGCCTGCGACGCCCGCAACTCCTGGTGCTCAC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCAGCCTCTCCTGAGCTaGGGGGAGGCGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVQPLLS*GEAGQV
Trigger: CACCTGTCCCGCCTCCCCCCAGCTCAGGAGAGGCTG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWQEQAH*PLPGVR
Trigger: CCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWCRAEH*PGPETR
Trigger: CCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCA...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVCRAEH*PGPETR
Trigger: CCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCA...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGGAGACTCCAGCTTCTaGAGGCGGCGCCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGGDSSF*RRRRRS
Trigger: GCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCTCC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGAPAEL*CIGLSI
Trigger: GATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGAGGCGCACTGGCCCTTaGCTGGAGTGCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGRRTGP*LECGWA
Trigger: TGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGTGCGGAACATTGCCCTaGCCCGGAGACCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWCGTLP*PGDQEP
Trigger: GGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCA...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGCTGCACTGGTGGATaGAGGAGCCACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGCTGG*RSHSLS
Trigger: GGAGAGGCTGTGGCTCCTCCATCCACCAGTGCAGCC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAGGTGCTGCCGCTCATaGCCCTCCAGAGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWRCCRS*PSRARS
Trigger: GCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWSAAGQ*LLGETG
Trigger: ACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGTGGGGCAGGTCTGCTaGCGCTGGAACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAVGQVC*RWNQER
Trigger: GCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCAC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCCGGCGGAGCTCTGCTaGATCGGGCTCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPPAELC*IGLSIL
Trigger: GAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGGGAAGGCAAAGGGTaGAGGCAGGGGCATACCCAT +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGEGKG*RQGHTH
Trigger: ATGGGTATGCCCCTGCCTCCACCCTTTGCCTTCCCC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGGGAAGGCAAAGGGTaGAGGCAGGGGCATACCCAT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGEGKG*RQGHTH
Trigger: ATGGGTATGCCCCTGCCTCCACCCTTTGCCTTCCCC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWCLQPL*SPHLGT
Trigger: CGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAQEQAH*PLPGVR
Trigger: CCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCTGCCAGTTGAGAAGTaGCCTTCCTTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVLPVEK*PSLGAG
Trigger: CCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCTGCGCTGGCAGCGATaGACGAAGGACATCCATACG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWLRWQR*TKDIHT
Trigger: CGTATGGATGTCCTTCGTGCATCGCTGCCAGCGCAG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCTGCGCTGGCAGCGATaGACGAAGGACATCCATACG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVLRWQR*TKDIHT
Trigger: CGTATGGATGTCCTTCGTGCATCGCTGCCAGCGCAG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAGAGCCTGGGCCAGATaGTGTGGCAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWRAWAR*CGRSSS
Trigger: ACTGCTGCTTCTGCCACAGCATCTGGCCCAGGCTCT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAGAGCCTGGGCCAGATaGTGTGGCAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVRAWAR*CGRSSS
Trigger: ACTGCTGCTTCTGCCACAGCATCTGGCCCAGGCTCT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCATGTTACGCAGGCTCTaGAGCCGGGCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPMLRRL*SRASRC
Trigger: GCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACAT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCAGGCATCTCCTCTGTaGCCACTGACTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWQASPL*PLTQEL
Trigger: CAGCTCCTGAGTCAGTGGGCACAGAGGAGATGCCTG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCCGGCGGAGCTCTGCTaGATCGGGCTCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAPAELC*IGLSIL
Trigger: GAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGGAGACTCCAGCTTCTaGAGGCGGCGCCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLGDSSF*RRRRRS
Trigger: GCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCTCC...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGGCAGGGTCCCTCAGTaGTGCCCGCCTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLGRVPQ*CPPAPP
Trigger: TGGGGGTGCAGGCGGGCAGCACTGAGGGACCCTGCC...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGTGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVCWGWT*SGTPQW
Trigger: CCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCA...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGTGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWCWGWT*SGTPQW
Trigger: CCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCA...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGAGCTCCTCTGGGGTaGCATCTGGATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGAPLG*HLDTGC
Trigger: ACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCGGCAGGGCCAGCCTCTaGGGCAGAGCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGGRASL*GRARAW
Trigger: CCAGGCTCTGGCTCTGCCCCAGAGGCTGGCCCTGCC...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGGCAGGGCCAGCCTCTaGGGCAGAGCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLGRASL*GRARAW
Trigger: CCAGGCTCTGGCTCTGCCCCAGAGGCTGGCCCTGCC...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCAGGTGCTGCCGCTCATaGCCCTCCAGAGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPRCCRS*PSRARS
Trigger: GCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCATTTCAGGGGCTGGTaGGGAGGCTCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPHFRGW*GGSWGW
Trigger: CCAACCCCAGGAGCCTCCCCACCAGCCCCTGAAATG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGACCCGAGATCCCCATaGCTGCCTGGGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGDPRSP*LPGTGV
Trigger: GACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACTCCGGGGGTGGTGGTaGCTGCGCTGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRLRGWW*LRWQRC
Trigger: GCATCGCTGCCAGCGCAGTCACCACCACCCCCGGAG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGACAGGGTGTTCATGTTaGGGATGGCTCGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWTGCSC*GWLGET
Trigger: TGTCTCGCCGAGCCATCCGCAACATGAACACCCTGT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGTGGGGCAGGTCTGCTaGCGCTGGAACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLVGQVC*RWNQER
Trigger: GCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCAC...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLRASRC*RSWPSR
Trigger: TCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLAPAEL*CIGLSI
Trigger: GATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGC...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGACATTGTCCATTGCCTaGAGCTCCTCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVTLSIA*SSSGVA
Trigger: TGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCATCCATACGGCAGGTaGGGCAGGTCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAHPYGR*GRSAAA
Trigger: AGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGGCAGGGCCAGCCTCTaGGGCAGAGCCAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSGRASL*GRARAW
Trigger: CCAGGCTCTGGCTCTGCCCCAGAGGCTGGCCCTGCC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCTGGGGCAGTGTCAGTaGGCAACAGGAGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPLGQCQ*ATGDSS
Trigger: GCTGGAGTCTCCTGTTGCCCACTGACACTGCCCCAG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGGGGGTACTACTCCCTaGTGCAGACAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPGGTTP*CRQRGS
Trigger: GCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCTCCGGGGGTGGTGGTaGCTGCGCTGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGLRGWW*LRWQRC
Trigger: GCATCGCTGCCAGCGCAGTCACCACCACCCCCGGAG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGGTCTCCGGCCAGCTaGCAGGCCGAAAGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRSPAS*QAESVR
Trigger: CCGCACGCTTTCGGCCTGTCAGCTGGCCGGAGACCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR GCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAGRHHH*RAEHCP
Trigger: AGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRASRC*RSWPSR
Trigger: TCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCCGGCGGAGCTCTGCTaGATCGGGCTCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGPAELC*IGLSIL
Trigger: GAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGGCGCACTGGCCCTTaGCTGGAGTGCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRRTGP*LECGWA
Trigger: TGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACGGTCAGCGCCAGGCTaGCCGCCATCATCACTGCCG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSRSAPG*PPSSLP
Trigger: CGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCGGTCAGCGCCAGGCTaGCCGCCATCATCACTGCCG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRSAPG*PPSSLP
Trigger: CGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGTGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGTGCCTGGAGCTCCTCTaGGGTGGCATCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGCLELL*GGIWIQ
Trigger: CTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCA...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAGGAGCGCAGGCAGCTaGTATGGAAAATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWRSAGS*YGKCGC
Trigger: GCAACCACATTTTCCATACCAGCTGCCTGCGCTCCT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCAGCCTCTCCTGAGCTaGGGGGAGGCGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSQPLLS*GEAGQV
Trigger: CACCTGTCCCGCCTCCCCCCAGCTCAGGAGAGGCTG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGCGTCCAGCAGTGTGTaGATGTTACGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPASSSV*MLRRLC
Trigger: GCAGAGCCTGCGTAACATCCACACACTGCTGGACGC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCATGGTGGGGAGGCTCCTaGGGTTGGGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSWWGGS*GWGRGL
Trigger: GAGGCCACGACCCCAACCCCAGGAGCCTCCCCACCA...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGGTGGGGAGGCTCCTaGGGTTGGGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGWWGGS*GWGRGL
Trigger: GAGGCCACGACCCCAACCCCAGGAGCCTCCCCACCA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAACLQPL*SPHLGT
Trigger: CGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSQEQAH*PLPGVR
Trigger: CCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACAGGAGCAGGCGCACTaGCCCTTGCCTGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSQEQAH*PLPGVR
Trigger: CCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCTGTCACAGCTTTCTTaGACTGTCTCATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVLSQLS*TVSWPG
Trigger: ACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCTCCGGGGGTGGTGGTaGCTGCGCTGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLLRGWW*LRWQRC
Trigger: GCATCGCTGCCAGCGCAGTCACCACCACCCCCGGAG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSCRAEH*PGPETR
Trigger: CCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGCAGACATTGTCCATTaGCTGGAGCTCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGADIVH*LELLWG
Trigger: ACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGCAGACATTGTCCATTaGCTGGAGCTCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPADIVH*LELLWG
Trigger: ACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGTGGGGCAGGTCTGCTaGCGCTGGAACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAVGQVC*RWNQER
Trigger: GCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCAC...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCTGCGCTGGCAGCGATaGACGAAGGACATCCATACG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAALRWQR*TKDIHT
Trigger: CGTATGGATGTCCTTCGTGCATCGCTGCCAGCGCAG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGSCGCS*STGPRK
Trigger: CTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACCGGCGGAGCTCTGCTaGATCGGGCTCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRPAELC*IGLSIL
Trigger: GAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGAPAEL*CIGLSI
Trigger: GATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGTGTTCCAGCGAGGGCTaGTCAAAAGAGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGCSSEG*SKEQRL
Trigger: CAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACA...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGGCAGGGTCCCTCAGTaGTGCCCGCCTGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLGRVPQ*CPPAPP
Trigger: TGGGGGTGCAGGCGGGCAGCACTGAGGGACCCTGCC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCTCTGGGGTGGCATCTaGATACAGGGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWLWGGI*IQGVHV
Trigger: AACATGAACACCCTGTATCCAGATGCCACCCCAGAG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCGCAGGCAGCTGGTATaGAAAATGTGGTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPRRQLV*KMWLQG
Trigger: GCCCTGCAACCACATTTTCCATACCAGCTGCCTGCG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCAGCCTCTCCTGAGCTaGGGGGAGGCGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGQPLLS*GEAGQV
Trigger: CACCTGTCCCGCCTCCCCCCAGCTCAGGAGAGGCTG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCAGCCTCTCCTGAGCTaGGGGGAGGCGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAQPLLS*GEAGQV
Trigger: CACCTGTCCCGCCTCCCCCCAGCTCAGGAGAGGCTG...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTAAAGGGCTGCACTGGTaGATGGAGGAGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAKGLHW*MEEPQP
Trigger: AGGCTGTGGCTCCTCCATCCACCAGTGCAGCCCTTT...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCAGGGGGCACAGGCATTaGGGGGAAGGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGRGHRH*GEGKGW
Trigger: CCACCCTTTGCCTTCCCCCCAATGCCTGTGCCCCCT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCAGGTGCTGCCGCTCATaGCCCTCCAGAGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGRCCRS*PSRARS
Trigger: GCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTTGGTGGGGAGGCTCCTaGGGTTGGGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAWWGGS*GWGRGL
Trigger: GAGGCCACGACCCCAACCCCAGGAGCCTCCCCACCA...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCATTTCAGGGGCTGGTaGGGAGGCTCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGHFRGW*GGSWGW
Trigger: CCAACCCCAGGAGCCTCCCCACCAGCCCCTGAAATG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCATTTCAGGGGCTGGTaGGGAGGCTCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLHFRGW*GGSWGW
Trigger: CCAACCCCAGGAGCCTCCCCACCAGCCCCTGAAATG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCGACCCGAGATCCCCATaGCTGCCTGGGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGDPRSP*LPGTGV
Trigger: GACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTC...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGTCTGGAGTCCACACTTaGGAACGGGAGCTAATACTG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVSGVHT*ERELIL
Trigger: CAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGA...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLSAAGQ*LLGETG
Trigger: ACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACT...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGGRTGV*GSRREP
Trigger: TGGCTCACGCCTACTACCTCAAACACCAGTTCTACC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGTCTCTTCTCGGCAGATaGTGCAGACATTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVSLLGR*CRHCPL
Trigger: CAATGGACAATGTCTGCATCATCTGCCGAGAAGAGA...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTGGGGTCGTGGCCTCTaGGCTAGGGATGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSWGRGL*ARDAGG
Trigger: TCCACCAGCATCCCTAGCTCAGAGGCCACGACCCCA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGPCPSP*PEGRQG
Trigger: TCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGG...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLRASRC*RSWPSR
Trigger: TCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLAPAEL*CIGLSI
Trigger: GATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCTTGGGCGCTGGGATTaGAGTGGTCAGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSLGRWD*SGQEQA
Trigger: CGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGCRAEH*PGPETC
Trigger: ACAGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTGCGGAACATTGCCCTaGCCCGGAGACCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSCGTLP*PGDQEP
Trigger: GGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCATCCATACGGCAGGTaGGGCAGGTCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAHPYGR*GRSAAA
Trigger: AGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAGGGGGCACAGGCATTaGGGGGAAGGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRRGHRH*GEGKGW
Trigger: CCACCCTTTGCCTTCCCCCCAATGCCTGTGCCCCCT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTAGGTGCTGCCGCTCATaGCCCTCCAGAGCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGARCCRS*PSRARS
Trigger: GCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCT...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCACAGGGCTGAAGAGTTaGAGAGGAAGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPTGLKS*RGRLEL
Trigger: CAGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRSAAGQ*LLGETG
Trigger: ACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAGTGCGGCTGGGCAGTaGCTGCTGGGTGAGACAGGT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGSAAGQ*LLGETG
Trigger: ACCTGTCTCACCCAGCAGCCACTGCCCAGCCGCACT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCTGCCAGTTGAGAAGTaGCCTTCCTTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLLPVEK*PSLGAG
Trigger: CCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAGRTGV*GSRREP
Trigger: TGGCTCACGCCTACTACCTCAAACACCAGTTCTACC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGTCGTGGCCTCTaGGCTAGGGATGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGWGRGL*ARDAGG
Trigger: TCCACCAGCATCCCTAGCTCAGAGGCCACGACCCCA...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAGAGGAAGGCTGGAACTaGCCCGAGATCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSEEGWN*PEIPMA
Trigger: AGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTC...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGAGGAAGGCTGGAACTaGCCCGAGATCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGEEGWN*PEIPMA
Trigger: AGCCATGGGGATCTCGGGTCAGTTCCAGCCTTCCTC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGAGGCATTCCTTTCCCTaGGTTGTGTGGTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: GLQWSGAGALALAWSAAGRHSFP*VVWLPV
Trigger: TACTGGCAACCACACAACTCAGGGAAAGGAATGCCT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAETMRQ*KSQEML
Trigger: CAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGCCGCACCGGCGTCTaGGGTCTCCGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGRTGV*GLRPAD
Trigger: GTCAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGCAGGGCCCAGGCTTaGGCAAAGCGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGRAQA*AKRPHR
Trigger: CCGGTGCGGCCGCTTTGCTCAAGCCTGGGCCCTGCC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCCCATCATCACTGCCGTaGGGAACATTGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGPSSLP*GTLPWP
Trigger: GGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGG...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSGRHHH*RAEHCP
Trigger: AGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTATGTTACGCAGGCTCTaGAGCCGGGCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAMLRRL*SRASRC
Trigger: GCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACAT...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLRYWLI*SMAASS
Trigger: GCTGGACGCCGCCATGCTGCAGATCAACCAGTACCT...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCAGGCATCTCCTCTGTaGCCACTGACTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGQASPL*PLTQEL
Trigger: CAGCTCCTGAGTCAGTGGGCACAGAGGAGATGCCTG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGTGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLCWGWT*SGTPQW
Trigger: CCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCA...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLLPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTAGGAGCGCAGGCAGCTaGTATGGAAAATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAARSAGS*YGKCGC
Trigger: GCAACCACATTTTCCATACCAGCTGCCTGCGCTCCT...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGGCTGCACTGGTGGATaGAGGAGCCACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGGCTGG*RSHSLS
Trigger: GGAGAGGCTGTGGCTCCTCCATCCACCAGTGCAGCC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCAAAGGGCTGCACTGGTaGATGGAGGAGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGKGLHW*MEEPQP
Trigger: AGGCTGTGGCTCCTCCATCCACCAGTGCAGCCCTTT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGGGGAAGGCAAAGGGTaGAGGCAGGGGCATACCCAT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAGEGKG*RQGHTH
Trigger: ATGGGTATGCCCCTGCCTCCACCCTTTGCCTTCCCC...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAGGGGGCACAGGCATTaGGGGGAAGGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGRGHRH*GEGKGW
Trigger: CCACCCTTTGCCTTCCCCCCAATGCCTGTGCCCCCT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCGCGTCCAGCAGTGTGTaGATGTTACGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGASSSV*MLRRLC
Trigger: GCAGAGCCTGCGTAACATCCACACACTGCTGGACGC...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACTGGGGCAGTGTCAGTaGGCAACAGGAGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRLGQCQ*ATGDSS
Trigger: GCTGGAGTCTCCTGTTGCCCACTGACACTGCCCCAG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGACCCGAGATCCCCATaGCTGCCTGGGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGDPRSP*LPGTGV
Trigger: GACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGACCCGAGATCCCCATaGCTGCCTGGGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEADPRSP*LPGTGV
Trigger: GACTCCAGTCCCAGGCAGCCATGGGGATCTCGGGTC...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCATACAAGTAGGGCTTaGAGGGGCAGCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLHTSRA*RGSPFS
Trigger: GGAGAAGGGGCTGCCCCTCCAAGCCCTACTTGTATG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCCTTCCTTGGGCGCTaGGATTGCAGTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGAFLGR*DCSGQE
Trigger: CTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGCCTTCCTTGGGCGCTaGGATTGCAGTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSAFLGR*DCSGQE
Trigger: CTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGCCTTCCTTGGGCGCTaGGATTGCAGTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRAFLGR*DCSGQE
Trigger: CTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACTGCCAGTTGAGAAGTaGCCTTCCTTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSLPVEK*PSLGAG
Trigger: CCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCTCCTCAGTGGAGTTaGCTGAAGTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGSPQWS*LKWQAG
Trigger: CCCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGA...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGTGATAGGCGTGGCTaGCGAAGAGGAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGCDRRG*RRGSPG
Trigger: TCCTGGACTTCCTCTTCGTCAGCCACGCCTATCACA...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCT +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGGRHHH*RAEHCP
Trigger: AGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCACAGGGTGTTCATGTTaGGGATGGCTCGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGTGCSC*GWLGET
Trigger: TGTCTCGCCGAGCCATCCGCAACATGAACACCCTGT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPYGKCG*RAVSWH
Trigger: GTGCCAAGAGACTGCCCTGCAACCACATTTTCCATA...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACTGCGCTGGCAGCGATaGACGAAGGACATCCATACG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRLRWQR*TKDIHT
Trigger: CGTATGGATGTCCTTCGTGCATCGCTGCCAGCGCAG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCATGTTACGCAGGCTCTaGAGCCGGGCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLMLRRL*SRASRC
Trigger: GCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACAT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRYWLI*SMAASS
Trigger: GCTGGACGCCGCCATGCTGCAGATCAACCAGTACCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGGAGACTCCAGCTTCTaGAGGCGGCGCCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLGDSSF*RRRRRS
Trigger: GCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCTCC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGTGTTCCAGCGAGGGCTaGTCAAAAGAGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLCSSEG*SKEQRL
Trigger: CAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACA...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLRDPHG*LGLESN
Trigger: ATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCTTGGGCGCTGGGATTaGAGTGGTCAGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLLGRWD*SGQEQA
Trigger: CGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGAAACTTCAGAAGTTCTaGCAGTTGAGAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWKLQKF*QLRSGL
Trigger: AAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCTGCGGAACATTGCCCTaGCCCGGAGACCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLCGTLP*PGDQEP
Trigger: GGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCA...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSLPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGTGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSTGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGATGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TCCTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTTGCGGATGGCTCGGCGACAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSGVASGYRVFMLRMARRQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...TCGCCGAGCCATCCGCAACATGAACACCCTGTATCCAGATGCCACCCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGGAGCTCCTCTGGGGTaGCATCTGGATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRGAPLG*HLDTGC
Trigger: ACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCATGCCTGGAGCTCCTCTaGGGTGGCATCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSCLELL*GGIWIQ
Trigger: CTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCA...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGCCTGGAGCTCCTCTaGGGTGGCATCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGCLELL*GGIWIQ
Trigger: CTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCATCCATACGGCAGGTaGGGCAGGTCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLHPYGR*GRSAAA
Trigger: AGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCGTCCAGCAGTGTGTaGATGTTACGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAASSSV*MLRRLC
Trigger: GCAGAGCCTGCGTAACATCCACACACTGCTGGACGC...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCTGGGGCAGTGTCAGTaGGCAACAGGAGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEALGQCQ*ATGDSS
Trigger: GCTGGAGTCTCCTGTTGCCCACTGACACTGCCCCAG...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRGAGTW*QDMFQR
Trigger: TCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSEGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCREGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAGAGGGAGCTGGCACTTaGTGGCAGGACATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSEGAGT*WQDMFQ
Trigger: CTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTC...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCATACAAGTAGGGCTTaGAGGGGCAGCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAHTSRA*RGSPFS
Trigger: GGAGAAGGGGCTGCCCCTCCAAGCCCTACTTGTATG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRSGLP*ALGLQW
Trigger: CCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRRSGLP*ALGLQW
Trigger: CCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGRSGLP*ALGLQW
Trigger: CCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCTGCCAGTTGAGAAGTaGCCTTCCTTGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGLPVEK*PSLGAG
Trigger: CCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTTCTCTTCTCGGCAGATaGTGCAGACATTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAASLLGR*CRHCPL
Trigger: CAATGGACAATGTCTGCATCATCTGCCGAGAAGAGA...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp ACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCAGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCT +
Preference number: 4 (lower is better)
Translates to: TVSWPGTWAGWQRVGRCAGRHHH*RAEHCP
Trigger: AGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCC...TGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR GCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCATCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTACAGGGTGTTCATGTTaGGGATGGCTCGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGATGCSC*GWLGET
Trigger: TGTCTCGCCGAGCCATCCGCAACATGAACACCCTGT...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGCAGACATTGTCCATTaGCTGGAGCTCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRADIVH*LELLWG
Trigger: ACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGTGGGGCAGGTCTGCTaGCGCTGGAACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLVGQVC*RWNQER
Trigger: GCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCAC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSSCGCS*STGPRK
Trigger: CTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCT...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAGAGCCTGGGCCAGATaGTGTGGCAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGRAWAR*CGRSSS
Trigger: ACTGCTGCTTCTGCCACAGCATCTGGCCCAGGCTCT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCAGGCATCTCCTCTGTaGCCACTGACTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGQASPL*PLTQEL
Trigger: CAGCTCCTGAGTCAGTGGGCACAGAGGAGATGCCTG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGTTCCAGCGAGGGCTaGTCAAAAGAGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGCSSEG*SKEQRL
Trigger: CAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGRDPHG*LGLESN
Trigger: ATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCG...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTCTCACTTGAGAAGCTaGAGAGGAAAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGSHLRS*RGKGPG
Trigger: CCCAGGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAGGCGCACTGGCCCTTaGCTGGAGTGCGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLRRTGP*LECGWA
Trigger: TGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEALPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHGQVHGPDGKEWEGVHLQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...AAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTCATGGCCAGGTACATaGGCCGGATGGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSSWPGT*AGWQRV
Trigger: CACTCTTTGCCATCCGGCCCATGTACCTGGCCATGA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGGAGCTCCTCTGGGGTaGCATCTGGATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGGAPLG*HLDTGC
Trigger: ACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGCCTGGAGCTCCTCTaGGGTGGCATCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGCLELL*GGIWIQ
Trigger: CTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCA...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTTGCGGATGGCTCGGCGAGATGCCTGGAGCTCCTCTaGGGTGGCATCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: LWGGIWIQGVHVADGSARCLELL*GGIWIQ
Trigger: CTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCA...TCTCGCCGAGCCATCCGCAACATGAACACCCTGTATCCAGATGCCACCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGTGGTGGGGAGGCTCCTaGGGTTGGGGTCGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLWWGGS*GWGRGL
Trigger: GAGGCCACGACCCCAACCCCAGGAGCCTCCCCACCA...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCTGGGGCAGTGTCAGTaGGCAACAGGAGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLLGQCQ*ATGDSS
Trigger: GCTGGAGTCTCCTGTTGCCCACTGACACTGCCCCAG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGGAGTW*QDMFQR
Trigger: TCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGGGGGTACTACTCCCTaGTGCAGACAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLGGTTP*CRQRGS
Trigger: GCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGGGACTGGAGTCAAATaGGAACCCCAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSGTGVK*EPQPLS
Trigger: GGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAATTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCCATCGTCATCAGGATaGCATACTCAAAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPPSSSG*HTQSQT
Trigger: TGTTTGGCTTTGAGTATGCCATCCTGATGACGATGG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSGRTGV*GSRREP
Trigger: TGGCTCACGCCTACTACCTCAAACACCAGTTCTACC...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: CLMARYMGRMAKSGKVCTPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...GGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR TCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTTGCGGATGGCTCGGCGAGACAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: LWGGIWIQGVHVADGSARQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...TCTCGCCGAGCCATCCGCAACATGAACACCCTGTATCCAGATGCCACCCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR TCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRETMRQ*KSQEML
Trigger: CAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTC...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAPCPSP*PEGRQG
Trigger: TCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSPCPSP*PEGRQG
Trigger: TCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CLMARYMGRMAKSGKVCTSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...GGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTACAGGGTGTTCATGTTaGGGATGGCTCGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEATGCSC*GWLGET
Trigger: TGTCTCGCCGAGCCATCCGCAACATGAACACCCTGT...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGSCGCS*STGPRK
Trigger: CTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGGTACTACTCCCTGGTaGAGACAGAGAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLGTTPW*RQRGSW
Trigger: CCAGCTCCCTCTCTGTCTGCACCAGGGAGTAGTACC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGRDPHG*LGLESN
Trigger: ATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCTCACTTGAGAAGCTaGAGAGGAAAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGSHLRS*RGKGPG
Trigger: CCCAGGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGA...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCCCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCTCTGGGGTGGCATCTaGATACAGGGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGLWGGI*IQGVHV
Trigger: AACATGAACACCCTGTATCCAGATGCCACCCCAGAG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGGAGCTCCTCTGGGGTaGCATCTGGATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLGAPLG*HLDTGC
Trigger: ACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCACATTGTCCATTGCCTaGAGCTCCTCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGTLSIA*SSSGVA
Trigger: TGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCGCAGGCAGCTGGTATaGAAAATGTGGTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEARRQLV*KMWLQG
Trigger: GCCCTGCAACCACATTTTCCATACCAGCTGCCTGCG...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCGCAGGCAGCTGGTATaGAAAATGTGGTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGRRQLV*KMWLQG
Trigger: GCCCTGCAACCACATTTTCCATACCAGCTGCCTGCG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAGGAGCGCAGGCAGCTaGTATGGAAAATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGRSAGS*YGKCGC
Trigger: GCAACCACATTTTCCATACCAGCTGCCTGCGCTCCT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCAAAGGGCTGCACTGGTaGATGGAGGAGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLKGLHW*MEEPQP
Trigger: AGGCTGTGGCTCCTCCATCCACCAGTGCAGCCCTTT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCCTCTTTCTCAGAGCTaGGGGTACTACTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGPLSQS*GYYSLV
Trigger: CACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTCTGGAGTCCACACTTaGGAACGGGAGCTAATACTG +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGSGVHT*ERELIL
Trigger: CAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGA...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGLQWSGAGALALAWSAAGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCAGAAGTGGCCTTCCTTaGGCGCTGGGATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLRSGLP*ALGLQW
Trigger: CCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 72 bp ACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTaGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TSEVLPVEKWPS*GAGIAVVRSRR
Trigger: GCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGGRTGV*GSRREP
Trigger: TGGCTCACGCCTACTACCTCAAACACCAGTTCTACC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCTGTCACAGCTTTCTTaGACTGTCTCATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGALSQLS*TVSWPG
Trigger: ACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACTGTCACAGCTTTCTTaGACTGTCTCATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSLSQLS*TVSWPG
Trigger: ACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGTCTCTTCTCGGCAGATaGTGCAGACATTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLSLLGR*CRHCPL
Trigger: CAATGGACAATGTCTGCATCATCTGCCGAGAAGAGA...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAGGCATTCCTTTCCCTaGGTTGTGTGGTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGRHSFP*VVWLPV
Trigger: TACTGGCAACCACACAACTCAGGGAAAGGAATGCCT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCACTTGGCCTAGGGGATaGCGCCTCTTTCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLTWPRG*RLFLRA
Trigger: AGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGAATACTGTTCGGCACTaGAGTGTGACTCCGCACATA +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLNTVRH*SVTPHI
Trigger: TATGTGCGGAGTCACACTGCAGTGCCGAACAGTATT...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCTTGGGCGCTGGGATTaGAGTGGTCAGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLLGRWD*SGQEQA
Trigger: CGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCTTGGGCGCTGGGATTaGAGTGGTCAGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYLGRWD*SGQEQA
Trigger: CGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCCCATCGTCATCAGGATaGCATAAAAGTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGPSSSG*HKSPHG
Trigger: ACCGTGTGGACTTTTATGCCATCCTGATGACGATGG...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307289.10
CDS-3UTR CCA 90 bp CTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTTGCGGATGGCTCGGCGAGACCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: LWGGIWIQGVHVADGSARPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...TCTCGCCGAGCCATCCGCAACATGAACACCCTGTATCCAGATGCCACCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp AGCATGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTGGAGGTCCACGGAGGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SMYTALLSQGFSLWRSTEGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...CTCCGTGGACCTCCAGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CCA 90 bp TCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SHGQVHGPDGKEWEGVHLGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...AAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCTCATGGCCAGGTACATaGGCCGGATGGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLSWPGT*AGWQRV
Trigger: CACTCTTTGCCATCCGGCCCATGTACCTGGCCATGA...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ATGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTGGAGGTCCACGGAGTGCTCATGGCCAGGTACATaGGCCGGATGGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: MYTALLSQGFSLWRSTECSWPGT*AGWQRV
Trigger: CACTCTTTGCCATCCGGCCCATGTACCTGGCCATGA...GCACTCCGTGGACCTCCAGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCTCTGGGGTGGCATCTaGATACAGGGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGALWGGI*IQGVHV
Trigger: AACATGAACACCCTGTATCCAGATGCCACCCCAGAG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAGGAGCGCAGGCAGCTaGTATGGAAAATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGRSAGS*YGKCGC
Trigger: GCAACCACATTTTCCATACCAGCTGCCTGCGCTCCT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCATTTCAGGGGCTGGTaGGGAGGCTCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLHFRGW*GGSWGW
Trigger: CCAACCCCAGGAGCCTCCCCACCAGCCCCTGAAATG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTCTTTCTCAGAGCTaGGGGTACTACTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLPLSQS*GYYSLV
Trigger: CACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTACAGGGCTGAAGAGTTaGAGAGGAAGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEATGLKS*RGRLEL
Trigger: CAGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGT...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLTTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 72 bp TCCTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGACATGATGGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: SSGVASGYRVFM*RMARRDMMASV
Trigger: GACAGATGCCATCATGTCTCGCCGAGCCATCCGCAACATGAACACCCTGTATCCAGATGCCACCCCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR TCA 90 bp GTCATCAGGATGGCATACTCAAAGCCAAACACCAGCTGCACAGAGGCCCCACGGCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VIRMAYSKPNTSCTEAPRHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...CCGTGGGGCCTCTGTGCAGCTGGTGTTTGGCTTTGAGTATGCCATCCTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTCTCCTCAGTGGAGTTaGCTGAAGTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSPQWS*LKWQAG
Trigger: CCCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAGGCATTCCTTTCCCTaGGTTGTGTGGTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGRHSFP*VVWLPV
Trigger: TACTGGCAACCACACAACTCAGGGAAAGGAATGCCT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAGGCATTCCTTTCCCTaGGTTGTGTGGTTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGRHSFP*VVWLPV
Trigger: TACTGGCAACCACACAACTCAGGGAAAGGAATGCCT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCCATCATCACTGCCGTaGGGAACATTGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLPSSLP*GTLPWP
Trigger: GGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCT +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGRHHH*RAEHCP
Trigger: AGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHGQVHGPDGKEWEGVHLAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...AAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp CAGGGTGTTCATGTTGCGGATGGCTCGGCGAGACATGATGGCATCTGTCACAGCAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QGVHVADGSARHDGICHSKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...GCTGTGACAGATGCCATCATGTCTCGCCGAGCCATCCGCAACATGAACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR GCA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TERELALGGRTCSSEGCSKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEAWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSYGKCG*RAVSWH
Trigger: GTGCCAAGAGACTGCCCTGCAACCACATTTTCCATA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAAATACTGTTCGGCACTaGAGTGTGACTCCGCACATA +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRNTVRH*SVTPHI
Trigger: TATGTGCGGAGTCACACTGCAGTGCCGAACAGTATT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAATACTGTTCGGCACTaGAGTGTGACTCCGCACATA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSNTVRH*SVTPHI
Trigger: TATGTGCGGAGTCACACTGCAGTGCCGAACAGTATT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCAGCAAGTTCATAGCTTaGCTCCAGCCCCTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLSKFIA*LQPLWS
Trigger: ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCCGAGAAAGGGCTGCTaGACTGGTGGATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLPRKGC*TGGWRS
Trigger: GCTCCTCCATCCACCAGTGCAGCAGCCCTTTCTCGG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377190.8
CDS-3UTR GCA 90 bp GTTCTCACTCTGGAGGTCCACGGAGTGCAGCACATACTTGATGAAGATGGTGAGCCCCACGGGTCAGGATaGTGTGATAGGCGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VLTLEVHGVQHILDEDGEPHGSG*CDRRGD
Trigger: GTCTCCACGCCTATCACAGCATCCTGACCCGTGGGG...CTCACCATCTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CCA 90 bp CACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: HSFLELSHGQVHGPDGKECWGWT*SGTPQW
Trigger: CCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCA...CTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp ATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: MASVTAFLNCLMARYMGRTGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...CCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCAGGGGTTCTCACTCTaGAGGTCCACGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYQGFSL*RSTECS
Trigger: GCTGCACTCCGTGGACCTCCAGAGTGAGAACCCCTG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCTCTGGGGTGGCATCTaGATACAGGGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGLWGGI*IQGVHV
Trigger: AACATGAACACCCTGTATCCAGATGCCACCCCAGAG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCTGGTATGGAAAATGTaGTTGCAGGGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSLVWKM*LQGSLL
Trigger: CAAGAGACTGCCCTGCAACCACATTTTCCATACCAG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCAGCCTCTTTCCACTTaGCCTAGGGGATGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYQPLST*PRGCRL
Trigger: GAGGCGGCATCCCCTAGGCCAAGTGGAAAGAGGCTG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTGCCTCCAGCCCCTCTaGAGTCCACACTTGGGAACG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYCLQPL*SPHLGT
Trigger: CGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSTTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGAACCACAAGAGGCTTCTaGGGAGATCAGGGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRTTRGF*GDQGKK
Trigger: TTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGT...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTCTCTTCTCGGCAGATaGTGCAGACATTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGSLLGR*CRHCPL
Trigger: CAATGGACAATGTCTGCATCATCTGCCGAGAAGAGA...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAGAGCCTGGGCCAGATaGTGTGGCAGAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLRAWAR*CGRSSS
Trigger: ACTGCTGCTTCTGCCACAGCATCTGGCCCAGGCTCT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLRYWLI*SMAASS
Trigger: GCTGGACGCCGCCATGCTGCAGATCAACCAGTACCT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYRYWLI*SMAASS
Trigger: GCTGGACGCCGCCATGCTGCAGATCAACCAGTACCT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGGCATCTCCTCTGTaGCCACTGACTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLQASPL*PLTQEL
Trigger: CAGCTCCTGAGTCAGTGGGCACAGAGGAGATGCCTG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCAAACTTCAGAAGTTCTaGCAGTTGAGAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VQTERELALGGRTCSSEGKLQKF*QLRSGL
Trigger: AAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAAGCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGTGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: EACKQLCVEHVHSLVVPGCWGWT*SGTPQW
Trigger: CCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCA...CCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp GAAGCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: EACKQLCVEHVHSLVVPGLPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...CCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp ACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTACAGGACTGCCATGCTaGGGCTGGACTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TALCRACTQPCCPRGSHSTGLPC*GWTWSG
Trigger: ACCTGACCAAGTCCAGCCCCAGCATGGCAGTCCTGT...AGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CCA 90 bp GGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTTCCTCAGCCAGCCAGTaGAAACATTTGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GTWWQDMFQRGLLKRAEASSASQ*KHLRKR
Trigger: TCTCTTCCTCAAATGTTTCCACTGGCTGGCTGAGGA...AGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp ATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGTCATGGCCAGGTACATaGGCCGGATGGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: MASVTAFLNCLMARYMGRSWPGT*AGWQRV
Trigger: CACTCTTTGCCATCCGGCCCATGTACCTGGCCATGA...CCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp GAAGCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGGAGCTCCTCTGGGGTaGCATCTGGATACAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EACKQLCVEHVHSLVVPGGAPLG*HLDTGC
Trigger: ACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCC...CCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCTGGTATGGAAAATGTaGTTGCAGGGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGLVWKM*LQGSLL
Trigger: CAAGAGACTGCCCTGCAACCACATTTTCCATACCAG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCTGGTATGGAAAATGTaGTTGCAGGGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGLVWKM*LQGSLL
Trigger: CAAGAGACTGCCCTGCAACCACATTTTCCATACCAG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGGAGCTGGCACTTGGTaGCAGGACATGTTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLGAGTW*QDMFQR
Trigger: TCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCATACAAGTAGGGCTTaGAGGGGCAGCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYHTSRA*RGSPFS
Trigger: GGAGAAGGGGCTGCCCCTCCAAGCCCTACTTGTATG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp ACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTCCAGACAAGTCTCTGTaGCGGCGTACCAGGAACGTT +
Preference number: 4 (lower is better)
Translates to: TALCRACTQPCCPRGSHSPDKSL*RRTRNV
Trigger: AACGTTCCTGGTACGCCGTCACAGAGACTTGTCTGG...AGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR TCA 90 bp CACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSFLELSHGQVHGPDGKEHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...CTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR TCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTGTGATAGGCGTGGCTaGCGAAGAGGAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYCDRRG*RRGSPG
Trigger: TCCTGGACTTCCTCTTCGTCAGCCACGCCTATCACA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GGTGAGCACCATCGTCATCAGGATGGCATACTCAAAGCCAAACACCAGCTGCACCCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: GEHHRHQDGILKAKHQLHPCPSP*PEGRQG
Trigger: TCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGG...GTGCAGCTGGTGTTTGGCTTTGAGTATGCCATCCTGATGACGATGGTGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR GCA 90 bp CACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGCCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGA +
Preference number: 4 (lower is better)
Translates to: HSFLELSHGQVHGPDGKEPCPSP*PEGRQG
Trigger: TCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGG...CTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp GCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGTTTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ACKQLCVEHVHSLVVPGVSAALS*PKNTLP
Trigger: GGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGA...AACCCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp GATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: DGICHSFLELSHGQVHGPVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...CGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp CACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HSFLELSHGQVHGPDGKEVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...CTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp GGTGAGCACCATCGTCATCAGGATGGCATACTCAAAGCCAAACACCAGCTGCACAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GEHHRHQDGILKAKHQLHKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...GTGCAGCTGGTGTTTGGCTTTGAGTATGCCATCCTGATGACGATGGTGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: SHGQVHGPDGKEWEGVHLKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...AAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp GAAGCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGACAGGGTGTTCATGTTaGGGATGGCTCGGCGAGACA +
Preference number: 4 (lower is better)
Translates to: EACKQLCVEHVHSLVVPGTGCSC*GWLGET
Trigger: TGTCTCGCCGAGCCATCCGCAACATGAACACCCTGT...CCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGCAGACATTGTCCATTaGCTGGAGCTCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLADIVH*LELLWG
Trigger: ACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLGLGDAASFSELGVLLYGKCG*RAVSWH
Trigger: GTGCCAAGAGACTGCCCTGCAACCACATTTTCCATA...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGACTTGGCCTAGGGGATaGCGCCTCTTTCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLTWPRG*RLFLRA
Trigger: AGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGTCTCACTTGAGAAGCTaGAGAGGAAAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLSHLRS*RGKGPG
Trigger: CCCAGGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGA...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAAACTTCAGAAGTTCTaGCAGTTGAGAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRGGPASKFIACLQPLWSKLQKF*QLRSGL
Trigger: AAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGTCCTCAGCCAGCCAGTaGAAACATTTGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ELSHGQVHGPDGKEWEGVSSASQ*KHLRKR
Trigger: TCTCTTCCTCAAATGTTTCCACTGGCTGGCTGAGGA...CACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGTACATGGGCCGGATaGCAAAGAGTGGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGTWAG*QRVGRC
Trigger: ACACCTTCCCACTCTTTGCCATCCGGCCCATGTACC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTCATGGCCAGGTACATaGGCCGGATGGCAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSWPGT*AGWQRV
Trigger: CACTCTTTGCCATCCGGCCCATGTACCTGGCCATGA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACACATTGTCCATTGCCTaGAGCTCCTCTGGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYTLSIA*SSSGVA
Trigger: TGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCGCAGGCAGCTGGTATaGAAAATGTGGTTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYRRQLV*KMWLQG
Trigger: GCCCTGCAACCACATTTTCCATACCAGCTGCCTGCG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGATGGCTGCCTGGGACTaGAGTCAAATGGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLMAAWD*SQMGTP
Trigger: TGGGGTTCCCATTTGACTCCAGTCCCAGGCAGCCAT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCATCCCGAAAAACGGTaGAGGCCAGACAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYHPEKR*RPDKSL
Trigger: CAGAGACTTGTCTGGCCTTCACCGTTTTTCGGGATG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp GAAGATGGTGAGCACCATCGTCATCAGGATGGCATACTCAAAGCCAAACACCAGCAACAAAGCGGGGGCTaGAGTCATCCCGAAAAACGG +
Preference number: 4 (lower is better)
Translates to: EDGEHHRHQDGILKAKHQQQSGG*SHPEKR
Trigger: CCGTTTTTCGGGATGACTTCAGCCCCCGCTTTGTTG...CTGGTGTTTGGCTTTGAGTATGCCATCCTGATGACGATGGTGCTCACCATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCAGGTCAGTCTCACTTaGGAAGCTGCAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYQVSLT*EAAEER
Trigger: CCTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYETMRQ*KSQEML
Trigger: CAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp TGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: CHSFLELSHGQVHGPDGKETMRQ*KSQEML
Trigger: CAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTC...TTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGTGCTCCATCTCTGCTaGCCTCAGTTGCCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLVLHLC*PQLPKE
Trigger: TTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCAC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAAGGTGCTCCATCTCTaGTGCCCTCAGTTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLKVLHL*CPQLPK
Trigger: TTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAAACTTCAGAAGTTCTaGCAGTTGAGAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGKLQKF*QLRSGL
Trigger: AAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp ATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGGATGGCATAAGACAATaGGGCAGTGAAAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MASVTAFLNCLMARYMGRDGIRQ*GSERAR
Trigger: CCTGGCTCTTTCACTGCCGCATTGTCTTATGCCATC...CCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp GACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: DMMASVTAFLNCLMARYMLPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...CATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp TGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAACCGGATGGCAAAGAGTaGGAAGGTGTGCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: CHSFLELSHGQVHGPDGKPDGKE*EGVHLD
Trigger: ATCAAGGTGCACACCTTCCCACTCTTTGCCATCCGG...TTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp GATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGCTCTGGGGTGGCATCTaGATACAGGGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: DGICHSFLELSHGQVHGPLWGGI*IQGVHV
Trigger: AACATGAACACCCTGTATCCAGATGCCACCCCAGAG...CGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGACAGGGCTGAAGAGTTaGAGAGGAAGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLTGLKS*RGRLEL
Trigger: CAGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GCGAGACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTAGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ARHDGICHSFLELSHGQVAQRTP*PSPCPE
Trigger: TTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGC...TACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp GTTCTCACTCTGGAGGTCCACGGAGTGCAGCACATACTTGATGAAGATGGTGAGTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VLTLEVHGVQHILDEDGEWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...CTCACCATCTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTCTGGAGTCCACACTTaGGAACGGGAGCTAATACTG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSGVHT*ERELIL
Trigger: CAGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTGTCCCAGGGGTTCCATCGTCATCAGGATaGCATAAGACAATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ACKQLCVEHVHSLVVPGVPSSSG*HKTMRQ
Trigger: CTGCCGCATTGTCTTATGCCATCCTGATGACGATGG...AACCCCTGGGACAACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR TCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTCTCCGGGGGTGGTGGTaGCTGCGCTGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASLRGWW*LRWQRC
Trigger: GCATCGCTGCCAGCGCAGTCACCACCACCCCCGGAG...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp GTTCTCACTCTGGAGGTCCACGGAGTGCAGCACATACTTGATGAAGATGGTGAGAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLTLEVHGVQHILDEDGEKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...CTCACCATCTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR GCA 90 bp TGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAAAGAAGAGTGAAGAGTaGAACAAAGCGGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CHSFLELSHGQVHGPDGKKKSEE*NKAGAE
Trigger: TTCAGCCCCCGCTTTGTTGCACTCTTCACTCTTCTT...TTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLYGKCG*RAVSWH
Trigger: GTGCCAAGAGACTGCCCTGCAACCACATTTTCCATA...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGGAGACTCCAGCTTCTaGAGGCGGCGCCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASGDSSF*RRRRRS
Trigger: GCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCTCC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGAATACTGTTCGGCACTaGAGTGTGACTCCGCACATA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLNTVRH*SVTPHI
Trigger: TATGTGCGGAGTCACACTGCAGTGCCGAACAGTATT...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGACAGGCCGAAAGCGTaGGGCGGGGCTGAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASDRPKA*GGAEGR
Trigger: ACGCCCCTCAGCCCCGCCGCACGCTTTCGGCCTGTC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTCCTCAGCCAGCCAGTaGAAACATTTGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSSASQ*KHLRKR
Trigger: TCTCTTCCTCAAATGTTTCCACTGGCTGGCTGAGGA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCTGGTATGGAAAATGTaGTTGCAGGGCAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLLVWKM*LQGSLL
Trigger: CAAGAGACTGCCCTGCAACCACATTTTCCATACCAG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp CATGATGGTCATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAAACAGGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HDGHEGHVQQNLDEACKQGRTGV*GSRREP
Trigger: TGGCTCACGCCTACTACCTCAAACACCAGTTCTACC...CTGTTTACAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATGACCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR TCA 90 bp GACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGCTGTCACAGCTTTCTTaGACTGTCTCATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DMMASVTAFLNCLMARYMLSQLS*TVSWPG
Trigger: ACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAG...CATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR TCA 90 bp GGTCATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAAACAGCTCTGTAAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GHEGHVQQNLDEACKQLCKTMRQ*KSQEML
Trigger: CAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTT...ACAGAGCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR GCA 90 bp CGAGACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACAAGAGTGGGAAGGTGTaGACCTTGATCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: RDMMASVTAFLNCLMARYKSGKV*TLIMMV
Trigger: GACCATCATGATCAAGGTGCACACCTTCCCACTCTT...GTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGGTAAGAAAAGGAAATaGGTACCAGTCTTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYGKKRK*VPVLGV
Trigger: CACCCCTAAGACTGGTACCCATTTCCTTTTCTTACC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCCATCGTCATCAGGATaGCATACTCAAAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLPSSSG*HTQSQT
Trigger: TGTTTGGCTTTGAGTATGCCATCCTGATGACGATGG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp GAAGATGGTGAGCACCATCGTCATCAGGATGGCATACTCAAAGCCAAACACCAGCCATCGTCATCAGGATaGCATACTCAAAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: EDGEHHRHQDGILKAKHQPSSSG*HTQSQT
Trigger: TGTTTGGCTTTGAGTATGCCATCCTGATGACGATGG...CTGGTGTTTGGCTTTGAGTATGCCATCCTGATGACGATGGTGCTCACCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR TCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTGGGGTCGTGGCCTCTaGGCTAGGGATGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASWGRGL*ARDAGG
Trigger: TCCACCAGCATCCCTAGCTCAGAGGCCACGACCCCA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AACCTTGATGAAGCCTGTAAACAGCTCTGTGTAGAGCATGTACACAGCCTTGTTTGGAGGTCCACGGAGTaGAGCACATACTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: NLDEACKQLCVEHVHSLVWRSTE*STYLMK
Trigger: CTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCA...AACAAGGCTGTGTACATGCTCTACACAGAGCTGTTTACAGGCTTCATCAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTATGTTACGCAGGCTCTaGAGCCGGGCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASMLRRL*SRASRC
Trigger: GCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACAT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp CATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAAACAGCTCTGTGTATCCTCAGCCAGCCAGTaGAAACATTTGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HEGHVQQNLDEACKQLCVSSASQ*KHLRKR
Trigger: TCTCTTCCTCAAATGTTTCCACTGGCTGGCTGAGGA...TACACAGAGCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGGCTGCACTGGTGGATaGAGGAGCCACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASGCTGG*RSHSLS
Trigger: GGAGAGGCTGTGGCTCCTCCATCCACCAGTGCAGCC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAGGGGGCACAGGCATTaGGGGGAAGGCAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASRGHRH*GEGKGW
Trigger: CCACCCTTTGCCTTCCCCCCAATGCCTGTGCCCCCT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
3UTR CAA 72 bp AGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTaGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: SNSNSKLQKFCQ*RSGLPWALGLQ
Trigger: CTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTCTCCTCAGTGGAGTTaGCTGAAGTGGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASSPQWS*LKWQAG
Trigger: CCCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGGGGAAGGCAAAGGGTaGAGGCAGGGGCATACCCAT +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASGEGKG*RQGHTH
Trigger: ATGGGTATGCCCCTGCCTCCACCCTTTGCCTTCCCC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGGGGGTACTACTCCCTaGTGCAGACAGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASGGTTP*CRQRGS
Trigger: GCTCCCTCTCTGTCTGCACCAGGGAGTAGTACCCCC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTGCCTTCCTTGGGCGCTaGGATTGCAGTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASAFLGR*DCSGQE
Trigger: CTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGC...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTCTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASLPCWG*TWSGTP
Trigger: TGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAG...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR TCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTGTGATAGGCGTGGCTaGCGAAGAGGAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASCDRRG*RRGSPG
Trigger: TCCTGGACTTCCTCTTCGTCAGCCACGCCTATCACA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASSCGCS*STGPRK
Trigger: CTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTGTTCCAGCGAGGGCTaGTCAAAAGAGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASCSSEG*SKEQRL
Trigger: CAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTACTTGGCCTAGGGGATaGCGCCTCTTTCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASTWPRG*RLFLRA
Trigger: AGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTCGAGATCCCCATGGCTaGCTGGGACTGGAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASRDPHG*LGLESN
Trigger: ATTTGACTCCAGTCCCAGGCAGCCATGGGGATCTCG...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR GCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTCTCACTTGAGAAGCTaGAGAGGAAAGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASSHLRS*RGKGPG
Trigger: CCCAGGCCCCTTTCCTCTGCAGCTTCTCAAGTGAGA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CCA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTATCCCCATGGCTGCCTaGGACTGGAGTCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: KDTSKEVIPILNFRSSASIPMAA*DWSQMG
Trigger: TCCCATTTGACTCCAGTCCCAGGCAGCCATGGGGAT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVQAHWP*PGVRLG
Trigger: GCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS TCA 90 bp TCGCAGGCAGGGCCCAGGCTTGAGCAAAGCGGCCGCACCGGCGTCTaGGGTCTCCGGCCAGCTGACAGGCCGAAAGCGTGCGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: SQAGPRLEQSGRTGV*GLRPADRPKACGGA
Trigger: AGCCCCGCCGCACGCTTTCGGCCTGTCAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCCGCTTTGCTCAAGCCTGGGCCCTGCCTGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS GCA 90 bp CCACAGCCCCGGTCAGCGCCAGGCTGGCCGCCATCATCACTGCCGTaGGGAACATTGCCCTGGCCCGGAGACCAGGAACCCAGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: PQPRSAPGWPPSSLP*GTLPWPGDQEPSAA
Trigger: CGCGGCGCTGGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS-3UTR CAA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGGGAGGCTCCTGGGGTaGGGGTCGTGGCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVGRLLG*GSWPLS
Trigger: GCTCAGAGGCCACGACCCCAACCCCAGGAGCCTCCC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS CCA 90 bp GCAGTCCTAGCTCCGCCCCTTTACGCTCGCACCGGCGAACCTGCCTaGGCAGGCAGCTCGCGCAGGACGGGGCGGGACCAGACAGTTGCG +
Preference number: 5 (lower is better)
Translates to: AVLAPPLYARTGEPA*AGSSRRTGRDQTVA
Trigger: CGCAACTGTCTGGTCCCGCCCCGTCCTGCGCGAGCTGCCTGCCCAGGCAGGTTCGCCGGTGCGAGCGTAAAGGGGCGGAGCTAGGACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCCAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPQAHWP*PGVRLG
Trigger: GCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTG...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp AGCCACCACAGCCCCGGTCAGCGCCAGGCTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCTGGCCCGGAGACCAGGAACCCAGCG +
Preference number: 5 (lower is better)
Translates to: SHHSPGQRQAGRHHH*RAEHCPGPETRNPA
Trigger: CGCTGGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCTGTGGTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS GCA 90 bp CAAGGCAGTCCTAGCTCCGCCCCTTTACGCTCGCACCGGCGAACCTaGCTGGGCAGGCAGCTCGCGCAGGACGGGGCGGGACCAGACAGT +
Preference number: 5 (lower is better)
Translates to: QGSPSSAPLRSHRRT*LGRQLAQDGAGPDS
Trigger: ACTGTCTGGTCCCGCCCCGTCCTGCGCGAGCTGCCTGCCCAGGCAGGTTCGCCGGTGCGAGCGTAAAGGGGCGGAGCTAGGACTGCCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS GCA 90 bp AGCCACCACAGCCCCGGTCAGCGCCAGGCTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCTGGCCCGGAGACCTGTGAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SHHSPGQRQAGRHHH*RAEHCPGPETCEHQ
Trigger: CTGGTGCTCACAGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCTGTGGTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR CAA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCCTTGGGCGCTGGGATaGCAGTGGTCAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GLQWSGAGALALAWSAAGPWALG*QWSGAG
Trigger: GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGG...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGGAGAAGTGGCCTTCCTaGGGCGCTGGGATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVEKWPS*GAGIAV
Trigger: CACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTC...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp TGCAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTACGCAGGCTCTaGAGCCGGGCCTCCAGGTGCTGCCGCTCATGGCCCTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CSMAASSSVWMLRRL*SRASRCCRSWPSRA
Trigger: AGCTCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS GCA 90 bp GGCAACAGGAGACTCCAGCTTCTGCAGGCGGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATCCTCAGGCATCTCCTCTGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GNRRLQLLQAAPAEL*CIGLSILRHLLCAH
Trigger: GTGGGCACAGAGGAGATGCCTGAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCTCCTGTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS-3UTR CAA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGCTCTGCTGCCCTCAGTaGCCCAAAGAACACCTTGCC +
Preference number: 5 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVLCCPQ*PKEHLA
Trigger: GGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAG...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCACAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TERELALGGRTCSSEGCSQAHWP*PGVRLG
Trigger: GCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTG...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp AGTGTGTGGATGTTACGCAGGCTCTGCAGCCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGAGCTCGTAGCTCCTCTGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SVWMLRRLCSRASRC*RSWPSRARSSSGVS
Trigger: GCTGACCCCAGAGGAGCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACATCCACACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS-3UTR CAA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAGGGAGGCTCCTGGGGTaGGGGTCGTGGCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TERELALGGRTCSSEGCSGRLLG*GSWPLS
Trigger: GCTCAGAGGCCACGACCCCAACCCCAGGAGCCTCCC...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGGAGAAGTGGCCTTCCTaGGGCGCTGGGATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GLQWSGAGALALAWSAAGEKWPS*GAGIAV
Trigger: CACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTC...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTAGGCAGGGCCCAGGCTaGAGCAAAGCGGCCGCACCG +
Preference number: 5 (lower is better)
Translates to: LRGGPASKFIACLQPLWSRQGPG*SKAAAP
Trigger: CGGTGCGGCCGCTTTGCTCAAGCCTGGGCCCTGCCT...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCTGCCGTGCGGAACATaGCCCTGGCCCGGAGACCTG +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLLPCGT*PWPGDL
Trigger: CAGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS CCA 90 bp GTGAGGTACTGGTTGATCTGCAGCATGGCGGCGTCCAGCAGTGTGTaGATGTTACGCAGGCTCTGCAGCCGGGCCTCCAGGTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VRYWLICSMAASSSV*MLRRLCSRASRCCR
Trigger: GCGGCAGCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS CCA 90 bp GGAAGAGAAGGGACGAGAGGCGGGCCTGGCCTTGGCATCCAAGGTTaGGCAGATTCTCCTGCCCTTGGTGAGCCCCAAGGAGGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GREGTRGGPGLGIQG*ADSPALGEPQGGQH
Trigger: GTGCTGGCCTCCTTGGGGCTCACCAAGGGCAGGAGAATCTGCCCAACCTTGGATGCCAAGGCCAGGCCCGCCTCTCGTCCCTTCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527765.1
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCTGCCGTGCGGAACATaGCCCTGGCCCGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGALPCGT*PWPGDQ
Trigger: CTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCTGCCGTGCGGAACATaGCCCTGGCCCGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: LRGGPASKFIACLQPLWSLPCGT*PWPGDQ
Trigger: CTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CAA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGTCTCCTCAGTGGAGTaGACTGAAGTGGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: LGLQWSGAGALALAWSAAVSSVE*TEVAGR
Trigger: CCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGAC...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGGGAGGCTCCTGGGGTaGGGGTCGTGGCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGGRLLG*GSWPLS
Trigger: GCTCAGAGGCCACGACCCCAACCCCAGGAGCCTCCC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGGGAGGCTCCTGGGGTaGGGGTCGTGGCCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGGRLLG*GSWPLS
Trigger: GCTCAGAGGCCACGACCCCAACCCCAGGAGCCTCCC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 5 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGCTCTGGAGTCCACACTaGGGAACGGGAGCTAATACT +
Preference number: 5 (lower is better)
Translates to: QEQAHWPLPGVRLGSGCWLWSPH*GTGANT
Trigger: AGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAG...CCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCCTGCCGTGCGGAACATaGCCCTGGCCCGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGLPCGT*PWPGDQ
Trigger: CTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAG...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
CDS-3UTR CAA 90 bp GAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGCAGTGGCTGCTGGGTGACAGGTCAGTCTCACTaGAGAAGCTGCAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: EQAHWPLPGVRLGSGCWVTGQSH*RSCRGK
Trigger: CTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGT...CACCCAGCAGCCACTGCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTCCTTGGGCGCTGGGATaGCAGTGGTCAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAPWALG*QWSGAG
Trigger: GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGG...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGTGTGAGCACCAGGAGTaGCGGGCGTCGCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGCEHQE*RASQAG
Trigger: CCCTGCCTGCGACGCCCGCAACTCCTGGTGCTCACA...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS TCA 90 bp GGCTGGACTTGGTCAGGTACACCACAGTGGGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCACCACAGCCCCGGTCAGCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GWTWSGTPQWGRTGV*GSRREPPQPRSAPG
Trigger: GCCTGGCGCTGACCGGGGCTGTGGTGGCTCACGCCTACTACCTCAAACACCAGTTCTACCCCACTGTGGTGTACCTGACCAAGTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527142.5
ENST00000528487.1
CDS GCA 90 bp GGCAGCGATGCACGAAGGACATCCATACGGCAGGTGGGGCAGGTCTaGTGCCGCTGGAACCAGGAGCGCAGGCAGCTGGTATGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GSDARRTSIRQVGQV*CRWNQERRQLVWKM
Trigger: CATTTTCCATACCAGCTGCCTGCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATGTCCTTCGTGCATCGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS GCA 90 bp GGCAGAAGCAGCAGTAGCACTGGTGCCAGCAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAGGGCTGCACTGGTGGATGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GRSSSSTGASSCGCS*STGPRKGCTGGWRS
Trigger: GCTCCTCCATCCACCAGTGCAGCCCTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCTGCTGGCACCAGTGCTACTGCTGCTTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
ENST00000527765.1
CDS GCA 90 bp AGCGAGGAGCCCAAGGAGGCCAGCACGGTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTACGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SEEPKEASTVRYWLI*SMAASSSVWMLRRL
Trigger: GAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGCTCCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS-3UTR CAA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGATGTACACAGCCTTGTaGTCCCAGGGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: GLQWSGAGALALAWSAAGMYTAL*SQGFSL
Trigger: GAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCATGTACACAGCCTTGTaGTCCCAGGGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPMYTAL*SQGFSL
Trigger: GAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GLQWSGAGALALAWSAAGSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp AGCGATGCACGAAGGACATCCATACGGCAGGTGGGGCAGGTCTGCTaGCGCTGGAACCAGGAGCGCAGGCAGCTGGTATGGAAAATGTGG +
Preference number: 5 (lower is better)
Translates to: SDARRTSIRQVGQVC*RWNQERRQLVWKMW
Trigger: CCACATTTTCCATACCAGCTGCCTGCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATGTCCTTCGTGCATCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS GCA 90 bp CAGACACACCCCAAGGAGGCCAGCACGGTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTACGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QTHPKEASTVRYWLI*SMAASSSVWMLRRL
Trigger: GAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 90 bp TTGGTGAGCCCCAAGGAGGCCAGCACGGTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTACGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LVSPKEASTVRYWLI*SMAASSSVWMLRRL
Trigger: GAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGGCTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527765.1
CDS CCA 90 bp CTCCTGCCCTTGGTGAGCCCCAAGGAGGCCAGCACGGTGAGGTACTaGTTGATCTGCAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTA +
Preference number: 5 (lower is better)
Translates to: LLPLVSPKEASTVRY*LICSMAASSSVWML
Trigger: TAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGGCTCACCAAGGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527765.1
CDS CCA 90 bp AGAGCGCTGAGCGAGGAGCCCAAGGAGGCCAGCACGGTGAGGTACTaGTTGATCTGCAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTA +
Preference number: 5 (lower is better)
Translates to: RALSEEPKEASTVRY*LICSMAASSSVWML
Trigger: TAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGCTCCTCGCTCAGCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCTCTGCTGCCCTCAGTaGCCCAAAGAACACCTTGCC +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLLCCPQ*PKEHLA
Trigger: GGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGTACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGTCTCCTCAGTGGAGTaGACTGAAGTGGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: QLRSGLPWALGLQWSGAGVSSVE*TEVAGR
Trigger: CCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGAC...GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTCTCTGGAGTCCACACTaGGGAACGGGAGCTAATACT +
Preference number: 5 (lower is better)
Translates to: LGLQWSGAGALALAWSAALWSPH*GTGANT
Trigger: AGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAG...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTGGGACAGGTCAGTCTCACTaGAGAAGCTGCAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLQWSGAGALALAWSAAGTGQSH*RSCRGK
Trigger: CTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGT...CCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGGCGCACTGGCCCTaGCCTGGAGTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLQAHWP*PGVRLG
Trigger: GCCCAGCCGCACTCCAGGCAAGGGCCAGTGCGCCTG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTTGGGCGCTGGGATaGCAGTGGTCAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: FPLGLGDAASFSELGVLLPWALG*QWSGAG
Trigger: GCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGAGAAGTGGCCTTCCTaGGGCGCTGGGATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAEKWPS*GAGIAV
Trigger: CACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTC...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS TCA 90 bp AGCAGCTGTGGTTGTAGCTGCTCCACTGGGCCGAGAAAGGGCTGCTaGAGAGCAGGAACGAAGTCAGTGAGTGTTCCATCCCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SSCGCSCSTGPRKGC*RAGTKSVSVPSLPP
Trigger: GGGCGGCAGGGATGGAACACTCACTGACTTCGTTCCTGCTCTTCAGCAGCCCTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS-3UTR CAA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACTCTGCTGCCCTCAGTaGCCCAAAGAACACCTTGCC +
Preference number: 5 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRLCCPQ*PKEHLA
Trigger: GGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCTTGCCTGGAGTGCGGCTTCTGTCACAGCTTTCTaGAACTGTCTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LGLQWSGAGALALAWSAASVTAF*NCLMAR
Trigger: CCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGA...AGCCGCACTCCAGGCAAGGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTTACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTTACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: LRGGPASKFIACLQPLWSYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTTGCAGACATTGTCCATaGCCTGGAGCTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGACRHCP*PGAPLG
Trigger: CCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCA...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCATGCAGACATTGTCCATaGCCTGGAGCTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TERELALGGRTCSSEGCSCRHCP*PGAPLG
Trigger: CCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCA...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGTTGCAGGGCAGTCTCTaGGCACCAGTCACCATCTCT +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLLQGSL*APVTIS
Trigger: AGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAA...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGCACAGGGCTGAAGAGTaGGAGAGGAAGGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLHRAEE*ERKAGT
Trigger: AGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGTG...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: TERELALGGRTCSSEGCSEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRGGPASKFIACLQPLWSEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGAGAAGTGGCCTTCCTaGGGCGCTGGGATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGEKWPS*GAGIAV
Trigger: CACTGCAATCCCAGCGCCCAAGGAAGGCCACTTCTC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp ACCCTGCCCTCACCTTTGGGGCAGCCGACATCTTACCTCCATCTCTaGTGCCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTTGCC +
Preference number: 5 (lower is better)
Translates to: TLPSPLGQPTSYLHL*CPQLPKEHLAHHLA
Trigger: GGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAGGTGAGGGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS CCA 90 bp AAGAGCAGGAACGAAGTCAGTGAGTGTTCCATCCCTGCCGCCCCCTaGCTGTCACAGTACCCAAAGGCTCACCTGCACTGGTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: KSRNEVSECSIPAAP*LSQYPKAHLHWWME
Trigger: CTCCATCCACCAGTGCAGGTGAGCCTTTGGGTACTGTGACAGCCAGGGGGCGGCAGGGATGGAACACTCACTGACTTCGTTCCTGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS CCA 90 bp TCCCCTGTACAGACACACCCCAAGGAGGCCAGCACGGTGAGGTACTaGTTGATCTGCAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTA +
Preference number: 5 (lower is better)
Translates to: SPVQTHPKEASTVRY*LICSMAASSSVWML
Trigger: TAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGGGTGTGTCTGTACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS CCA 90 bp GGAAGAGAAGGGACGAGAGGCGGGCCTGGCCTTGGCATCCAAGGTTaGGCAGATTCTCCTGCCCTTGGTGAGCCTTGCAGAACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: GREGTRGGPGLGIQG*ADSPALGEPCRTEY
Trigger: ATACTCTGTTCTGCAAGGCTCACCAAGGGCAGGAGAATCTGCCCAACCTTGGATGCCAAGGCCAGGCCCGCCTCTCGTCCCTTCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS-3UTR CAA 90 bp ACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCATGCCCAAAGAACACCTaGCCCATCACCTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TERELALGGRTCSSEGCSCPKNT*PITLPR
Trigger: TCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCA...TGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTGAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GGRTCSSEGCSKEQRLGLSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...CAGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GTGGCCTTCCTTGGGCGCTGGGATTGCAGTGGTCAGGAGCAGGCGCACTGGCCCATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: VAFLGRWDCSGQEQAHWPMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...GGGCCAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAGGAAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTTAGGGGTGGGCCAGCGAGCAAGTTCATAGCTTGCCTCCAGCCCCTCTGGAGTCACAGGGCTGAAGAGTaGGAGAGGAAGGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LRGGPASKFIACLQPLWSHRAEE*ERKAGT
Trigger: AGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGTG...ACTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGGAGCAAGTTCATAGCTaGCCTCCAGCCCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGEQVHS*PPAPLE
Trigger: CTCCAGAGGGGCTGGAGGCAAGCTATGAACTTGCTC...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGTGCCCAAAGAACACCTaGCCCATCACCTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGCPKNT*PITLPR
Trigger: TCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCA...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCTCTGCTGCCCTCAGTaGCCCAAAGAACACCTTGCC +
Preference number: 5 (lower is better)
Translates to: ELSHGQVHGPDGKEWEGVLCCPQ*PKEHLA
Trigger: GGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAG...CACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp CAGGGTGTTCATGTTGCGGATGGCTCGGCGAGACATGATGGCATCTGTCACAGCTACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: QGVHVADGSARHDGICHSYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...GCTGTGACAGATGCCATCATGTCTCGCCGAGCCATCCGCAACATGAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532771.5
CDS-3UTR CAA 90 bp CCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCCTGGTGCAGACAGAAGTTCTGCCAGTaGAGAAGTGGCCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PRGCRLFLRAGGTTPWCRQKFCQ*RSGLPW
Trigger: CCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTG...TCTGCACCAGGGAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS CCA 90 bp CCAGGAACGTTCCAGAAGGTGCTGGGGGCCAGGCAGGGAATAATGTaGATACCAAACATTCTTTCCCAGCACCCTGCCCTCACCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PGTFQKVLGARQGIM*IPNILSQHPALTFG
Trigger: CCCAAAGGTGAGGGCAGGGTGCTGGGAAAGAATGTTTGGTATCCACATTATTCCCTGCCTGGCCCCCAGCACCTTCTGGAACGTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS-3UTR CAA 90 bp TGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCATGTACACAGCCTTGTaGTCCCAGGGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: CLMARYMGRMAKSGKVCTMYTAL*SQGFSL
Trigger: GAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT...GGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCTTGCAGGGCAGTCTCTaGGCACCAGTCACCATCTCT +
Preference number: 5 (lower is better)
Translates to: FPLGLGDAASFSELGVLLLQGSL*APVTIS
Trigger: AGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAA...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCCACAGGGCTGAAGAGTaGGAGAGGAAGGCTGGAACT +
Preference number: 5 (lower is better)
Translates to: FPLGLGDAASFSELGVLLHRAEE*ERKAGT
Trigger: AGTTCCAGCCTTCCTCTCCAACTCTTCAGCCCTGTG...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGCAGAAGTTCTGCCAGTaGAGAAGTGGCCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGQKFCQ*RSGLPW
Trigger: CCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTG...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGCCTGGGACTGGAGTCAAATGGGAACCCCAGCCTCTTTCCACTTGGCCTAGGGAAGAGCCAGGAGATGTaGGGGCTGCGTTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: CLGLESNGNPSLFPLGLGKSQEM*GLRSIK
Trigger: CTTTATGGAACGCAGCCCCAACATCTCCTGGCTCTT...CCCTAGGCCAAGTGGAAAGAGGCTGGGGTTCCCATTTGACTCCAGTCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp GAAGGTGCTCCATCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAAGGAAGACAAGGACAAAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: EGAPSLLPSVAQRTP*PSPCPEGRQGQRPG
Trigger: TCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000525874.1
ENST00000526060.5
ENST00000527142.5
ENST00000529207.5
ENST00000531018.5
ENST00000532771.5
CDS GCA 90 bp CTTTGGGGCAGCCGACATCTTACCTCCATCTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCCATCACCTTGCCCAGAAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LWGSRHLTSISAALS*PKNTLPITLPRRKT
Trigger: TGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS-3UTR CAA 90 bp TCTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTATGTACACAGCCTTGTaGTCCCAGGGGTTCTCACTC +
Preference number: 5 (lower is better)
Translates to: SHGQVHGPDGKEWEGVHLMYTAL*SQGFSL
Trigger: GAGTGAGAACCCCTGGGACAACAAGGCTGTGTACAT...AAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: FPLGLGDAASFSELGVLLSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGTACACAGCCTTGTTGTCCCAGGGGTTCTCACTCTGGAGGTCCACGGAGTGCAAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: CTQPCCPRGSHSGGPRSASMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...TGCACTCCGTGGACCTCCAGAGTGAGAACCCCTGGGACAACAAGGCTGTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CAA 90 bp GTGCAGACAGAGAGGGAGCTGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: VQTERELALGGRTCSSEGMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...GCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCTCTGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCGGGAAGGTGTGCACCTaGATCATGATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGGKVCT*IMMVMK
Trigger: CTTCATGACCATCATGATCAAGGTGCACACCTTCCC...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CTCATGGCCAGGTACATGGGCCGGATGGCAAAGAGTGGGAAGGTGTGCACCTTGTCTGTCACAGCTTTCTaGAACTGTCTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LMARYMGRMAKSGKVCTLSVTAF*NCLMAR
Trigger: CCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGA...CAAGGTGCACACCTTCCCACTCTTTGCCATCCGGCCCATGTACCTGGCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACGTCTCCTCAGTGGAGTaGACTGAAGTGGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYVSSVE*TEVAGR
Trigger: CCGGCCTGCCACTTCAGTCAACTCCACTGAGGAGAC...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp TCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGACAAAGGCCTGGATGTACAGGACTG +
Preference number: 5 (lower is better)
Translates to: SLLPSVAQRTPCPSP*PEGRQGQRPGCTGL
Trigger: CAGTCCTGTACATCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527142.5
ENST00000532771.5
CDS GCA 90 bp TGGGGAGTCAGGCACCTTATAGGGGACTCACTCAATAAGCCACAGTaGTCGAGCCTTGGACTCAAGTTCCTCTCCAAGCCTGTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: WGVRHLIGDSLNKPQ*SSLGLKFLSKPVLS
Trigger: TGACAGCACAGGCTTGGAGAGGAACTTGAGTCCAAGGCTCGAGCACTGTGGCTTATTGAGTGAGTCCCCTATAAGGTGCCTGACTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 90 bp TCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGACAAAGGCCTGGATGTACAGGACCT +
Preference number: 5 (lower is better)
Translates to: SLLPSVAQRTPCPSP*PEGRQGQRPGCTGP
Trigger: AGGTCCTGTACATCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525874.1
ENST00000529207.5
ENST00000531018.5
ENST00000533685.1
CDS CCA 90 bp AATGTGGATACCAAACATTCTTTCCCAGCACCCTGCCCTCACCTTTaGGGCAGCCGACATCTTACCTCCATCTCTGCTGCCCTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: NVDTKHSFPAPCPHL*GSRHLTSISAALSC
Trigger: GCAACTGAGGGCAGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAGGTGAGGGCAGGGTGCTGGGAAAGAATGTTTGGTATCCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS-3UTR CAA 90 bp GTTCTCACTCTGGAGGTCCACGGAGTGCAGCACATACTTGATGAAGATGGTGAGCTCTGCTGCCCTCAGTaGCCCAAAGAACACCTTGCC +
Preference number: 5 (lower is better)
Translates to: VLTLEVHGVQHILDEDGELCCPQ*PKEHLA
Trigger: GGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAG...CTCACCATCTTCATCAAGTATGTGCTGCACTCCGTGGACCTCCAGAGTGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CAA 90 bp TGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCTGGGGCTATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: WWQDMFQRGLLKRAEAGAMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...AGCCCCAGCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TTTCCACTTGGCCTAGGGGATGCCGCCTCTTTCTCAGAGCTGGGGGTACTACTCGGGAAGGTGTGCACCTaGATCATGATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: FPLGLGDAASFSELGVLLGKVCT*IMMVMK
Trigger: CTTCATGACCATCATGATCAAGGTGCACACCTTCCC...GAGTAGTACCCCCAGCTCTGAGAAAGAGGCGGCATCCCCTAGGCCAAGTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGTGCAGACATTGTCCATaGCCTGGAGCTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLCRHCP*PGAPLG
Trigger: CCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCA...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 5 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS GCA 90 bp ACCAGTCACCATCTCTTCTCGGCAGATGATGCAGACATTGTCCATTaGCTGGAGCTCCTCTGGGGTGGCATCTGGATACAGGGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: TSHHLFSADDADIVH*LELLWGGIWIQGVH
Trigger: ATGAACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCCGAGAAGAGATGGTGACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000526121.5
CDS GCA 90 bp TCTCCTGCCCTTGGTGAGCCTTGCAGAACAGAGTATAGAATGATGTaGCCTTGTGGCCCCAGTGCCTGGCAAACACAAGTGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SPALGEPCRTEYRMM*PCGPSAWQTQVNML
Trigger: CAGCATGTTCACTTGTGTTTGCCAGGCACTGGGGCCACAAGGGCACATCATTCTATACTCTGTTCTGCAAGGCTCACCAAGGGCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 90 bp ATCTTACCTCCATCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTaGCCATCACCTTGCCCAGAAGGAAGACAAGGACAAAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ILPPSLLPSVAQRTP*PSPCPEGRQGQRPG
Trigger: TCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGGTAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS GCA 90 bp CAGGCAGGGAATAATGTGGATACCAAACATTCTTTCCCAGCACCCTaGCCTCACCTTTGGGGCAGCCGACATCTTACCTCCATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: QAGNNVDTKHSFPAP*PHLWGSRHLTSISA
Trigger: AGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAGGTGAGGGCAGGGTGCTGGGAAAGAATGTTTGGTATCCACATTATTCCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS CCA 90 bp GTCACCATCTCTTCTCGGCAGATGATGCAGACATTGTCCATTGCCTaGAGCTCCTCTGGGGTGGCATCTGGATACAGGGTGTTCATGTTG +
Preference number: 5 (lower is better)
Translates to: VTISSRQMMQTLSIA*SSSGVASGYRVFML
Trigger: CAACATGAACACCCTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCCGAGAAGAGATGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000526121.5
CDS-3UTR CAA 90 bp TGGCACTTGGTGGCAGGACATGTTCCAGCGAGGGCTGCTCAAAAGAGCAGAGGCATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: WHLVAGHVPARAAQKSRGMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...GCCTCTGCTCTTTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp GATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGTCTGTCACAGCTTTCTaGAACTGTCTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DGICHSFLELSHGQVHGPSVTAF*NCLMAR
Trigger: CCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGA...CGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACCTCTGGAGTCCACACTaGGGAACGGGAGCTAATACT +
Preference number: 5 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYLWSPH*GTGANT
Trigger: AGTATTAGCTCCCGTTCCCAAGTGTGGACTCCAGAG...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGCAGAAGTTCTGCCAGTaGAGAAGTGGCCTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLQKFCQ*RSGLPW
Trigger: CCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTG...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp CGAGACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACAGCATGTACACAGCCTaGTTGTCCCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RDMMASVTAFLNCLMARYSMYTA*LSQGFS
Trigger: TGAGAACCCCTGGGACAACAAGGCTGTGTACATGCT...GTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp AAACTTCAGAAGTTCTGCCAGTTGAGAAGTGGCCTTCCTTGGGCGCTGGGATTGGGGAAGGTGTGCACCTaGATCATGATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: KLQKFCQLRSGLPWALGLGKVCT*IMMVMK
Trigger: CTTCATGACCATCATGATCAAGGTGCACACCTTCCC...CAATCCCAGCGCCCAAGGAAGGCCACTTCTCAACTGGCAGAACTTCTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp TGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGGCAAAGGGAAGGTGTGCACCTaGATCATGATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: CHSFLELSHGQVHGPDGKGKVCT*IMMVMK
Trigger: CTTCATGACCATCATGATCAAGGTGCACACCTTCCC...TTTGCCATCCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp CCACCACCACAAGAGGCTTCTGGGGAGATCAGGGTAAGAAAAGGAAATGGGTACTCTGTCACAGCTTTCTaGAACTGTCTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPPQEASGEIRVRKGNGYSVTAF*NCLMAR
Trigger: CCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGA...GTACCCATTTCCTTTTCTTACCCTGATCTCCCCAGAAGCCTCTTGTGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp ATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGGGCCGGATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: MASVTAFLNCLMARYMGRMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...CCGGCCCATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp GAAGATGGTGAGCACCATCGTCATCAGGATGGCATACTCAAAGCCAAACACCAGGGGAAGGTGTGCACCTaGATCATGATGGTCATGAAG +
Preference number: 5 (lower is better)
Translates to: EDGEHHRHQDGILKAKHQGKVCT*IMMVMK
Trigger: CTTCATGACCATCATGATCAAGGTGCACACCTTCCC...CTGGTGTTTGGCTTTGAGTATGCCATCCTGATGACGATGGTGCTCACCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS-3UTR CAA 90 bp GACATGATGGCATCTGTCACAGCTTTCTTGAACTGTCTCATGGCCAGGTACATGAAGAGCCAGGAGATGTaGGGGCTGCGTTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: DMMASVTAFLNCLMARYMKSQEM*GLRSIK
Trigger: CTTTATGGAACGCAGCCCCAACATCTCCTGGCTCTT...CATGTACCTGGCCATGAGACAGTTCAAGAAAGCTGTGACAGATGCCATCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp ATGGTCATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAAACAGCTCTATGTACAGCAGAACCTaGATGAAGCCTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: MVMKAMYSRTLMKPVNSSMYSRT*MKPVNS
Trigger: GCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACAT...AGAGCTGTTTACAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527142.5
ENST00000532771.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTACAGGGTGTTCATGTaGCGGATGGCTCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASYRVFM*RMARRD
Trigger: GTCTCGCCGAGCCATCCGCAACATGAACACCCTGTA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTGCAGACATTGTCCATaGCCTGGAGCTCCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASCRHCP*PGAPLG
Trigger: CCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAGAGGGAGCTGGCACTaGGTGGCAGGACATGTTCCA +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASRGSWH*VAGHVP
Trigger: TGGAACATGTCCTGCCACCAAGTGCCAGCTCCCTCT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTTTGCAGGGCAGTCTCTaGGCACCAGTCACCATCTCT +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASLQGSL*APVTIS
Trigger: AGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAA...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTAAGAGCCAGGAGATGTaGGGGCTGCGTTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASKSQEM*GLRSIK
Trigger: CTTTATGGAACGCAGCCCCAACATCTCCTGGCTCTT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
CDS-3UTR CAA 90 bp AAAGACACTAGTAAGGAAGTAATTCCAATTCTAAACTTCAGAAGTTCTGCCAGTACAGGTCAGTCTCACTaGAGAAGCTGCAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: KDTSKEVIPILNFRSSASTGQSH*RSCRGK
Trigger: CTTTCCTCTGCAGCTTCTCAAGTGAGACTGACCTGT...ACTGGCAGAACTTCTGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000526060.5
CDS CCA 72 bp GCTCCGCCCCTTTACGCTCGCACCGGCGAACCTGCCTaGGCAGGCAGCTCGCGCAGGACGGGGCGGGACCAG +
Preference number: 6 (lower is better)
Translates to: APPLYARTGEPA*AGSSRRTGRDQ
Trigger: CTGGTCCCGCCCCGTCCTGCGCGAGCTGCCTGCCCAGGCAGGTTCGCCGGTGCGAGCGTAAAGGGGCGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS GCA 72 bp CCTAGCTCCGCCCCTTTACGCTCGCACCGGCGAACCTaGCTGGGCAGGCAGCTCGCGCAGGACGGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: PSSAPLRSHRRT*LGRQLAQDGAG
Trigger: TCCCGCCCCGTCCTGCGCGAGCTGCCTGCCCAGGCAGGTTCGCCGGTGCGAGCGTAAAGGGGCGGAGCTAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS CAA 90 bp CCTGTGAGCACCAGGAGTTGCGGGCGTCGCAGGCAGGGCCCAGGCTaGAGCAAAGCGGCCGCACCGGCGTCTGAGGTCTCCGGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PVSTRSCGRRRQGPG*SKAAAPASEVSGQL
Trigger: CAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCCGCTTTGCTCAAGCCTGGGCCCTGCCTGCGACGCCCGCAACTCCTGGTGCTCACAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS TCA 72 bp GGGCCCAGGCTTGAGCAAAGCGGCCGCACCGGCGTCTaGGGTCTCCGGCCAGCTGACAGGCCGAAAGCGTGC +
Preference number: 6 (lower is better)
Translates to: GPRLEQSGRTGV*GLRPADRPKAC
Trigger: GCACGCTTTCGGCCTGTCAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCCGCTTTGCTCAAGCCTGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS GCA 72 bp AGCCCCGGTCAGCGCCAGGCTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCTGGCCCGGAGACCAGG +
Preference number: 6 (lower is better)
Translates to: SPGQRQAGRHHH*RAEHCPGPETR
Trigger: CCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS CAA 72 bp CCAGGCTGGCCGCCATCATCACTGCCGTGCGGAACATaGCCCTGGCCCGGAGACCAGGAACCCAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: PGWPPSSLPCGT*PWPGDQEPSAA
Trigger: CGCGGCGCTGGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS CAA 90 bp CGGGGATGGAGAACCGGTGTCCAGCGGGGCTGCGGGCTACGGCTGTaGGTGAGAGCGCTGAGCGAGGAGCCCAAGGAGGCCAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: RGWRTGVQRGCGLRL*VRALSEEPKEASTV
Trigger: CACCGTGCTGGCCTCCTTGGGCTCCTCGCTCAGCGCTCTCACCAACAGCCGTAGCCCGCAGCCCCGCTGGACACCGGTTCTCCATCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS GCA 72 bp CAGGCTGGCCGCCATCATCACTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCAGGAACCCAGCGCCGCGA +
Preference number: 6 (lower is better)
Translates to: QAGRHHHCRAEH*PGPETRNPAPR
Trigger: TCGCGGCGCTGGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS GCA 72 bp CGGTCAGCGCCAGGCTGGCCGCCATCATCACTGCCGTaGGGAACATTGCCCTGGCCCGGAGACCAGGAACCC +
Preference number: 6 (lower is better)
Translates to: RSAPGWPPSSLP*GTLPWPGDQEP
Trigger: GGGTTCCTGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000528487.1
CDS GCA 72 bp AGCCCCGGTCAGCGCCAGGCTGGCCGCCATCATCACTaGCGTGCGGAACATTGCCCTGGCCCGGAGACCTGT +
Preference number: 6 (lower is better)
Translates to: SPGQRQAGRHHH*RAEHCPGPETC
Trigger: ACAGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS CCA 72 bp AGGCGTGAGCCACCACAGCCCCGGTCAGCGCCAGGCTaGCCGCCATCATCACTGCCGTGCGGAACATTGCCC +
Preference number: 6 (lower is better)
Translates to: RREPPQPRSAPG*PPSSLPCGTLP
Trigger: GGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTGGCGCTGACCGGGGCTGTGGTGGCTCACGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527142.5
ENST00000528487.1
CDS CCA 72 bp AGGCTCTGCAGCCGGGCCTCCAGGTGCTGCCGCTCATaGCCCTCCAGAGCTCGTAGCTCCTCTGGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: RLCSRASRCCRS*PSRARSSSGVS
Trigger: GCTGACCCCAGAGGAGCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCGGCTGCAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS CAA 72 bp AGAACCGGTGTCCAGCGGGGCTGCGGGCTACGGCTGTaGGTGAGAGCGCTGAGCGAGGAGCCCAAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RTGVQRGCGLRL*VRALSEEPKEA
Trigger: GGCCTCCTTGGGCTCCTCGCTCAGCGCTCTCACCAACAGCCGTAGCCCGCAGCCCCGCTGGACACCGGTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS TCA 72 bp GGGTGGCCCCTGATCCGCAGGCTCCGGGGGTGGTGGTaGCTGCGCTGGCAGCGATGCACGAAGGACATCCAT +
Preference number: 6 (lower is better)
Translates to: GWPLIRRLRGWW*LRWQRCTKDIH
Trigger: ATGGATGTCCTTCGTGCATCGCTGCCAGCGCAGTCACCACCACCCCCGGAGCCTGCGGATCAGGGGCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS CAA 90 bp CTGCCTGGGCAGGCAGCTCGCGCAGGACGGGGCGGGACCAGACAGTaGCGCGCACAGAAGGCTGGCGTAGCAGGTAAAGATGGCAGCTAC +
Preference number: 6 (lower is better)
Translates to: LPGQAARAGRGGTRQ*RAQKAGVAGKDGSY
Trigger: GTAGCTGCCATCTTTACCTGCTACGCCAGCCTTCTGTGCGCGCAACTGTCTGGTCCCGCCCCGTCCTGCGCGAGCTGCCTGCCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS GCA 72 bp CTCCAGCTTCTGCAGGCGGCGCCGGCGGAGCTCTGCTaGATCGGGCTCTCCATCCTCAGGCATCTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LQLLQAAPAELC*IGLSILRHLLC
Trigger: ACAGAGGAGATGCCTGAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGCCGCCTGCAGAAGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS GCA 72 bp AGACTCCAGCTTCTGCAGGCGGCGCCGGCGGAGCTCTaGTGCATCGGGCTCTCCATCCTCAGGCATCTCCTC +
Preference number: 6 (lower is better)
Translates to: RLQLLQAAPAEL*CIGLSILRHLL
Trigger: GAGGAGATGCCTGAGGATGGAGAGCCCGATGCAGCAGAGCTCCGCCGGCGCCGCCTGCAGAAGCTGGAGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS GCA 72 bp ATTGCCCTGGCCCGGAGACCTGTGAGCACCAGGAGTTaGGGGCGTCGCAGGCAGGGCCCAGGCTTGAGCAAA +
Preference number: 6 (lower is better)
Translates to: IALARRPVSTRS*GRRRQGPGLSK
Trigger: TTTGCTCAAGCCTGGGCCCTGCCTGCGACGCCCGCAACTCCTGGTGCTCACAGGTCTCCGGGCCAGGGCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS TCA 72 bp TGGCCCCAGCGATCTAGTCAGGTGGGCACACTCCACTaGACCTGGCCCTCTGGGAACTTCCTGGGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: WPQRSSQVGTLH*TWPSGNFLGEG
Trigger: CCCCTCCCCCAGGAAGTTCCCAGAGGGCCAGGTTCAGTGGAGTGTGCCCACCTGACTAGATCGCTGGGGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 72 bp ATGTTACGCAGGCTCTGCAGCCGGGCCTCCAGGTGCTaGCGCTCATGGCCCTCCAGAGCTCGTAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: MLRRLCSRASRC*RSWPSRARSSS
Trigger: AGAGGAGCTACGAGCTCTGGAGGGCCATGAGCGGCAGCACCTGGAGGCCCGGCTGCAGAGCCTGCGTAACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS GCA 72 bp CAGGCTGGCCGCCATCATCACTGCCGTGCGGAACATTaGCCTGGCCCGGAGACCTGTGAGCACCAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QAGRHHHCRAEH*PGPETCEHQEL
Trigger: CAACTCCTGGTGCTCACAGGTCTCCGGGCCAGGGCAATGTTCCGCACGGCAGTGATGATGGCGGCCAGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526060.5
CDS CCA 72 bp CTGGCAGCGATGCACGAAGGACATCCATACGGCAGGTaGGGCAGGTCTGCTGCCGCTGGAACCAGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: LAAMHEGHPYGR*GRSAAAGTRSA
Trigger: TGCGCTCCTGGTTCCAGCGGCAGCAGACCTGCCCCACCTGCCGTATGGATGTCCTTCGTGCATCGCTGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS CAA 72 bp CAGGCAGCTCGCGCAGGACGGGGCGGGACCAGACAGTaGCGCGCACAGAAGGCTGGCGTAGCAGGTAAAGAT +
Preference number: 6 (lower is better)
Translates to: QAARAGRGGTRQ*RAQKAGVAGKD
Trigger: ATCTTTACCTGCTACGCCAGCCTTCTGTGCGCGCAACTGTCTGGTCCCGCCCCGTCCTGCGCGAGCTGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530451.1
CDS CCA 72 bp TGGTTGATCTGCAGCATGGCGGCGTCCAGCAGTGTGTaGATGTTACGCAGGCTCTGCAGCCGGGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WLICSMAASSSV*MLRRLCSRASR
Trigger: CCTGGAGGCCCGGCTGCAGAGCCTGCGTAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS CCA 72 bp CCTCAAGCCCACCATGGCCCCAGCGATCTAGTCAGGTaGGCACACTCCACTGAACCTGGCCCTCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: PQAHHGPSDLVR*AHSTEPGPLGT
Trigger: AGTTCCCAGAGGGCCAGGTTCAGTGGAGTGTGCCCACCTGACTAGATCGCTGGGGCCATGGTGGGCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS TCA 72 bp AGGCCCCACGGGTCAGGATGCTGTGATAGGCGTGGCTaGCGAAGAGGAAGTCCAGGATGCCCAGGAGGAACA +
Preference number: 6 (lower is better)
Translates to: RPHGSGCCDRRG*RRGSPGCPGGT
Trigger: TGTTCCTCCTGGGCATCCTGGACTTCCTCTTCGTCAGCCACGCCTATCACAGCATCCTGACCCGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000528487.1
ENST00000529207.5
ENST00000531018.5
CDS GCA 72 bp AGCAGTAGCACTGGTGCCAGCAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAGGGCTGCACTGGTGGA +
Preference number: 6 (lower is better)
Translates to: SSSTGASSCGCS*STGPRKGCTGG
Trigger: TCCACCAGTGCAGCCCTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCTGCTGGCACCAGTGCTACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000526060.5
ENST00000527765.1
CDS GCA 72 bp AGCAGTAGCACTGGTGCCAGCAGCTGTGGTTGTAGCTaGTCCACTGGGCCGAGAAAGGGCTGCTGCACTGGT +
Preference number: 6 (lower is better)
Translates to: SSSTGASSCGCS*STGPRKGCCTG
Trigger: ACCAGTGCAGCAGCCCTTTCTCGGCCCAGTGGAGCAGCTACAACCACAGCTGCTGGCACCAGTGCTACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377190.8
CDS GCA 72 bp CCCAAGGAGGCCAGCACGGTGAGGTACTGGTTGATCTaGAGCATGGCGGCGTCCAGCAGTGTGTGGATGTTA +
Preference number: 6 (lower is better)
Translates to: PKEASTVRYWLI*SMAASSSVWML
Trigger: TAACATCCACACACTGCTGGACGCCGCCATGCTGCAGATCAACCAGTACCTCACCGTGCTGGCCTCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527765.1
ENST00000530451.1
CDS CCA 72 bp AACGAAGTCAGTGAGTGTTCCATCCCTGCCGCCCCCTaGCTGTCACAGTACCCAAAGGCTCACCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: NEVSECSIPAAP*LSQYPKAHLHW
Trigger: CCAGTGCAGGTGAGCCTTTGGGTACTGTGACAGCCAGGGGGCGGCAGGGATGGAACACTCACTGACTTCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS TCA 72 bp TGGTCAGGTACACCACAGTGGGGTAGAACTGGTGTTTaGGGTAGTAGGCGTGAGCCACCACAGCCCCGGTCA +
Preference number: 6 (lower is better)
Translates to: WSGTPQWGRTGV*GSRREPPQPRS
Trigger: TGACCGGGGCTGTGGTGGCTCACGCCTACTACCTCAAACACCAGTTCTACCCCACTGTGGTGTACCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527142.5
ENST00000528487.1
CDS GCA 72 bp CAAACACCAGCTGCACAGAGGCCCCACGGGTCAGGATaGTGTGATAGGCGTGGAGACAATGCGGCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: QTPAAQRPHGSG*CDRRGDNAAVK
Trigger: TTTCACTGCCGCATTGTCTCCACGCCTATCACAGCATCCTGACCCGTGGGGCCTCTGTGCAGCTGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS CAA 72 bp GGGGCAGGTCTGCTGCCGCTGGTATGGAAAATGTGGTaGCAGGGCAGTCTCTTGGCACCAGTCACCATCTCT +
Preference number: 6 (lower is better)
Translates to: GAGLLPLVWKMW*QGSLLAPVTIS
Trigger: AGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTTCCATACCAGCGGCAGCAGACCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526121.5
CDS TCA 72 bp GGTTGTAGCTGCTCCACTGGGCCGAGAAAGGGCTGCTaGAGAGCAGGAACGAAGTCAGTGAGTGTTCCATCC +
Preference number: 6 (lower is better)
Translates to: GCSCSTGPRKGC*RAGTKSVSVPS
Trigger: GGATGGAACACTCACTGACTTCGTTCCTGCTCTTCAGCAGCCCTTTCTCGGCCCAGTGGAGCAGCTACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 72 bp GGGCAGGTCTGCTGCCGCTGGTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCACCAGTCACCATCTCTT +
Preference number: 6 (lower is better)
Translates to: GQVCCRWYGKCG*RAVSWHQSPSL
Trigger: AAGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTTCCATACCAGCGGCAGCAGACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526121.5
CDS CCA 72 bp TGGAACCAGGAGCGCAGGCAGCTGGTATGGAAAATGTaGTTGCAGGGCAGTCTCTTGGCACCAGTCACCATC +
Preference number: 6 (lower is better)
Translates to: WNQERRQLVWKM*LQGSLLAPVTI
Trigger: GATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTTCCATACCAGCTGCCTGCGCTCCTGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS CCA 72 bp ACACCTTGCCCATCACTGCCATGCTGGGGCTGGACTTaGTCAGGTACACCACAGTGGGGTAGAACTGGTGTT +
Preference number: 6 (lower is better)
Translates to: TPCPSLPCWGWT*SGTPQWGRTGV
Trigger: AACACCAGTTCTACCCCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAGTGATGGGCAAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528487.1
CDS CAA 90 bp CTCTTGGCACCAGTCACCATCTCTTCTCGGCAGATGATGCAGACATaGTCCATTGCCTGGAGCTCCTCTGGGGTGGCATCTGGATACAGG +
Preference number: 6 (lower is better)
Translates to: LLAPVTISSRQMMQT*SIAWSSSGVASGYR
Trigger: CCTGTATCCAGATGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCCGAGAAGAGATGGTGACTGGTGCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000526121.5
CDS TCA 72 bp CTGCCCTTGGTGAGCCTTGCAGAACAGAGTATAGAATaGTGTGCCCTTGTGGCCCCAGTGCCTGGCAAACAC +
Preference number: 6 (lower is better)
Translates to: LPLVSLAEQSIE*CALVAPVPGKH
Trigger: GTGTTTGCCAGGCACTGGGGCCACAAGGGCACATCATTCTATACTCTGTTCTGCAAGGCTCACCAAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS TCA 72 bp CAGGATGCTGTGATAGGCGTGGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTGGGGCTGCGTTCCATA +
Preference number: 6 (lower is better)
Translates to: QDAVIGVETMRQ*KSQEMLGLRSI
Trigger: TATGGAACGCAGCCCCAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTCCACGCCTATCACAGCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527142.5
CDS TCA 72 bp CATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTaGGGGGAGGGGATGCAGAAAGCAGCAGGTCACAGG +
Preference number: 6 (lower is better)
Translates to: HEGHVQQNLDEA*GEGMQKAAGHR
Trigger: CCTGTGACCTGCTGCTTTCTGCATCCCCTCCCCTCAGGCTTCATCAAGGTTCTGCTGTACATGGCCTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529207.5
CDS GCA 72 bp ACCAGGAGCGCAGGCAGCTGGTATGGAAAATGTGGTTaGAGGGCAGTCTCTTGGCACCAGTCACCATCTCTT +
Preference number: 6 (lower is better)
Translates to: TRSAGSWYGKCG*RAVSWHQSPSL
Trigger: AAGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTTCCATACCAGCTGCCTGCGCTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS GCA 72 bp AGCCGACATCTTACCTCCATCTCTGCTGCCCTCAGTTaGCCAAAGAACACCTTGCCCATCACCTTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: SRHLTSISAALS*PKNTLPITLPR
Trigger: TCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGGTAAGATGTCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS GCA 72 bp TCACCTTTGGGGCAGCCGACATCTTACCTCCATCTCTaGTGCCCTCAGTTGCCCAAAGAACACCTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: SPLGQPTSYLHL*CPQLPKEHLAH
Trigger: ATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS CCA 72 bp CAAAGAACACCTTGCCCATCACTGCCATGCTGGGGCTaGACTTGGTCAGGTACACCACAGTGGGGTAGAACT +
Preference number: 6 (lower is better)
Translates to: QRTPCPSLPCWG*TWSGTPQWGRT
Trigger: AGTTCTACCCCACTGTGGTGTACCTGACCAAGTCCAGCCCCAGCATGGCAGTGATGGGCAAGGTGTTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528487.1
CDS CAA 72 bp CCAGTCACCATCTCTTCTCGGCAGATGATGCAGACATaGTCCATTGCCTGGAGCTCCTCTGGGGTGGCATCT +
Preference number: 6 (lower is better)
Translates to: PVTISSRQMMQT*SIAWSSSGVAS
Trigger: AGATGCCACCCCAGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCCGAGAAGAGATGGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000526121.5
CDS CAA 72 bp AACCAGGAGCGCAGGCAGCTGGTATGGAAAATGTGGTaGCAGGGCAGTCTCTTGGCACCAGTCACCATCTCT +
Preference number: 6 (lower is better)
Translates to: NQERRQLVWKMW*QGSLLAPVTIS
Trigger: AGAGATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTTCCATACCAGCTGCCTGCGCTCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
CDS CAA 72 bp TACCAAACATTCTTTCCCAGCACCCTGCCCTCACCTTaGGGGCAGCCGACATCTTACCTCCATCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: YQTFFPSTLPSP*GQPTSYLHLCC
Trigger: GCAGCAGAGATGGAGGTAAGATGTCGGCTGCCCCAAAGGTGAGGGCAGGGTGCTGGGAAAGAATGTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533685.1
CDS CAA 90 bp ATCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTaGCCCAGAAGGAAGACAAGGACAAAGGCCTGGATGTACAGGACC +
Preference number: 6 (lower is better)
Translates to: ISAALSCPKNTLPIT*PRRKTRTKAWMYRT
Trigger: GGTCCTGTACATCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525874.1
ENST00000529207.5
ENST00000531018.5
ENST00000533685.1
CDS TCA 72 bp GTCTCTTGGCACCAGTCACCATCTCTTCTCGGCAGATaGTGCAGACATTGTCCATTGCCTGGAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VSWHQSPSLLGR*CRHCPLPGAPL
Trigger: CAGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCCGAGAAGAGATGGTGACTGGTGCCAAGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000526121.5
CDS TCA 72 bp GACCAGCGCTTGAACTTGAGCCAGGATGGCTCCAAGTaGCTTCCTATTATTCGCTCCCTCAGTTTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: DQRLNLSQDGSK*LPIIRSLSLGA
Trigger: TGCCCCCAAACTGAGGGAGCGAATAATAGGAAGTCACTTGGAGCCATCCTGGCTCAAGTTCAAGCGCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 72 bp CCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTTaGCCAGAAGGAAGACAAGGACAAAGGCCTGGATGT +
Preference number: 6 (lower is better)
Translates to: PSVAQRTPCPSP*PEGRQGQRPGC
Trigger: ACATCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000525874.1
ENST00000526060.5
ENST00000527142.5
ENST00000529207.5
ENST00000531018.5
ENST00000532771.5
ENST00000533685.1
CDS CAA 72 bp GATGTACAGGACCTAGGAGTGGGGAGAGGCTGTGGTTaGAGGTCACTTTCTGCTTTCCTCTCCTTGGGACTC +
Preference number: 6 (lower is better)
Translates to: DVQDLGVGRGCG*RSLSAFLSLGL
Trigger: GAGTCCCAAGGAGAGGAAAGCAGAAAGTGACCTCAAACCACAGCCTCTCCCCACTCCTAGGTCCTGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525874.1
ENST00000529207.5
ENST00000531018.5
ENST00000533685.1
CDS CAA 90 bp ATCTCTGCTGCCCTCAGTTGCCCAAAGAACACCTTGCCCATCACCTaGCCCAGAAGGAAGACAAGGACAAAGGCCTGGATGTACAGGACT +
Preference number: 6 (lower is better)
Translates to: ISAALSCPKNTLPIT*PRRKTRTKAWMYRT
Trigger: AGTCCTGTACATCCAGGCCTTTGTCCTTGTCTTCCTTCTGGGCAAGGTGATGGGCAAGGTGTTCTTTGGGCAACTGAGGGCAGCAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000294256.12
ENST00000307289.10
ENST00000377190.8
ENST00000449943.5
ENST00000526060.5
ENST00000527142.5
ENST00000532771.5
CDS TCA 72 bp ATGCCCAGGAGGAACATAAGAGAGACAATGCGGCAGTaGAAGAGCCAGGAGATGTTGGGGCTGCGTTCCATA +
Preference number: 6 (lower is better)
Translates to: MPRRNIRETMRQ*KSQEMLGLRSI
Trigger: TATGGAACGCAGCCCCAACATCTCCTGGCTCTTTCACTGCCGCATTGTCTCTCTTATGTTCCTCCTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294256.12
ENST00000377190.8
ENST00000526060.5
ENST00000528487.1
ENST00000531018.5
CDS GCA 72 bp AGGCACCTTATAGGGGACTCACTCAATAAGCCACAGTaGTCGAGCCTTGGACTCAAGTTCCTCTCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: RHLIGDSLNKPQ*SSLGLKFLSKP
Trigger: AGGCTTGGAGAGGAACTTGAGTCCAAGGCTCGAGCACTGTGGCTTATTGAGTGAGTCCCCTATAAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 72 bp CTTGGTGAGCCTTGCAGAACAGAGTATAGAATGATGTaGCCTTGTGGCCCCAGTGCCTGGCAAACACAAGTG +
Preference number: 6 (lower is better)
Translates to: LGEPCRTEYRMM*PCGPSAWQTQV
Trigger: CACTTGTGTTTGCCAGGCACTGGGGCCACAAGGGCACATCATTCTATACTCTGTTCTGCAAGGCTCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449943.5
CDS GCA 72 bp TCCTATTATTCGCTCCCTCAGTTTGGGGGCAGCAATTaGCAATCTAAGTGTCACCACATCTCAGAAGAATAT +
Preference number: 6 (lower is better)
Translates to: SYYSLPQFGGSN*QSKCHHISEEY
Trigger: ATATTCTTCTGAGATGTGGTGACACTTAGATTGGCAATTGCTGCCCCCAAACTGAGGGAGCGAATAATAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449943.5