RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYTL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000147041

Ensembl transcript IDs: ENST00000297875.7, ENST00000456733.2

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTTCATGCCTTCCTGCATCCTCACTCTTGTCATGGCTTCACTGTaGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCTGACT +
Preference number: 1 (lower is better)
Translates to: FFMPSCILTLVMASL*AVHISLPLHLGPLT
Trigger: AGTCAGAGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGACAAGAGTGAGGATGCAGGAAGGCATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 90 bp TCAGTAGACATGACACAACCAGGGGCTGAAAATGTACCCGAGCAGTaGGGCTCATCTTATTGCACTTCTGCCATCAAGATGCTCTGGCTA +
Preference number: 1 (lower is better)
Translates to: SVDMTQPGAENVPEQ*GSSYCTSAIKMLWL
Trigger: TAGCCAGAGCATCTTGATGGCAGAAGTGCAATAAGATGAGCCCCACTGCTCGGGTACATTTTCAGCCCCTGGTTGTGTCATGTCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR TCA 90 bp TTCATACTACTGACATCTCTCCCCTCATGTCCCAACACTGTCAGGTaGGAAATGGCAGGGAAGCAGAATCCCAGGTCTCAGTTTGCTAAT +
Preference number: 1 (lower is better)
Translates to: FILLTSLPSCPNTVR*EMAGKQNPRSQFAN
Trigger: ATTAGCAAACTGAGACCTGGGATTCTGCTTCCCTGCCATTTCTCACCTGACAGTGTTGGGACATGAGGGGAGAGATGTCAGTAGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 90 bp CCCTTGCTCAAGCAACCATCTCCACCATGCCTTCTTGAGATCATGTaGATTCCTAGGGTGAGTAAAAGTTGGCCAGTATCCTTTCTTCTG +
Preference number: 1 (lower is better)
Translates to: PLLKQPSPPCLLEIM*IPRVSKSWPVSFLL
Trigger: CAGAAGAAAGGATACTGGCCAACTTTTACTCACCCTAGGAATCCACATGATCTCAAGAAGGCATGGTGGAGATGGTTGCTTGAGCAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 90 bp TGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCATaGCTTCTTGAGATCATGTGGATTCCTAGGGTGAGTAAAAGTTGG +
Preference number: 1 (lower is better)
Translates to: CNNRTIPLLKQPSPP*LLEIMWIPRVSKSW
Trigger: CCAACTTTTACTCACCCTAGGAATCCACATGATCTCAAGAAGGCATGGTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 90 bp CCATGCCTTCTTGAGATCATGTGGATTCCTAGGGTGAGTAAAAGTTaGCCAGTATCCTTTCTTCTGACTTTTCAAGTGATCTACCTTCTC +
Preference number: 1 (lower is better)
Translates to: PCLLEIMWIPRVSKS*PVSFLLTFQVIYLL
Trigger: GAGAAGGTAGATCACTTGAAAAGTCAGAAGAAAGGATACTGGCCAACTTTTACTCACCCTAGGAATCCACATGATCTCAAGAAGGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 90 bp TGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTaGAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCA +
Preference number: 1 (lower is better)
Translates to: CQSILKYYLVNPQVC*NNRTIPLLKQPSPP
Trigger: TGGTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 90 bp AGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTaGGCAAGTTATCTCAGCTCTCTGAAATTCACATTTGGAATCTGC +
Preference number: 1 (lower is better)
Translates to: SLDLSPDLVTASIWP*ASYLSSLKFTFGIC
Trigger: GCAGATTCCAAATGTGAATTTCAGAGAGCTGAGATAACTTGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 90 bp GAACATACCTTGGTCGGGTATGTTCATGCTCAAGTAATCAGACTCTaGTCCAAATTTCTTGACATAAGCCCTTTTATCTACCTAATAAGC +
Preference number: 1 (lower is better)
Translates to: EHTLVGYVHAQVIRL*SKFLDISPFIYLIS
Trigger: GCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAATTTGGAGCAGAGTCTGATTACTTGAGCATGAACATACCCGACCAAGGTATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 90 bp ATTGATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATaGCCTTGGGCAAGTTATCTCAGCTCTCTGAAATTCACATTTGGA +
Preference number: 1 (lower is better)
Translates to: IDSLDLSPDLVTASI*PWASYLSSLKFTFG
Trigger: TCCAAATGTGAATTTCAGAGAGCTGAGATAACTTGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR TCA 90 bp CGGGTATGTTCATGCTCAAGTAATCAGACTCTGCTCCAAATTTCTTaGCATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCA +
Preference number: 1 (lower is better)
Translates to: RVCSCSSNQTLLQIS*HKPFYLPNKHSIMP
Trigger: TGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAATTTGGAGCAGAGTCTGATTACTTGAGCATGAACATACCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 90 bp TGCCATTTCTTTTATGGCATAAACCCTATAAGCCTTTGCACAATTTaGTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAA +
Preference number: 1 (lower is better)
Translates to: CHFFYGINPISLCTI*LLTGQVVHFLSSNQ
Trigger: TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAAATGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTGACACAACCAGGGGCTaGAAATGTACCCGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: VMASLWAVHISLPLHLGPDTTRG*KCTRAV
Trigger: CACTGCTCGGGTACATTTTCAGCCCCTGGTTGTGTC...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACCCAACACTGTCAGGTaGGAAATGGCAGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: KQGGREQMESLILSHNRAPNTVR*EMAGKQ
Trigger: CTGCTTCCCTGCCATTTCTCACCTGACAGTGTTGGG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTGCCATCAAGATGCTCTaGCTATCCCTTTGGCTTAAA +
Preference number: 2 (lower is better)
Translates to: VMASLWAVHISLPLHLGPAIKML*LSLWLK
Trigger: TTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGC...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCCAACACTGTCAGGTaGGAAATGGCAGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPNTVR*EMAGKQ
Trigger: CTGCTTCCCTGCCATTTCTCACCTGACAGTGTTGGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAGCAGATGGAGTCTTTaGTTCTCTCCCATAACAGGG +
Preference number: 2 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHSRWSL*FSPITG
Trigger: CCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCAGCCAGATAGGTCCTaGTGGCCTCATTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSQPDRS*WPHSWR
Trigger: TCTCCAAGAATGAGGCCACCAGGACCTATCTGGCTG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATTCATCTTGGCCCTCTaGCTTCCTTTGACCAATGAG +
Preference number: 2 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAFILAL*LPLTNE
Trigger: CTCATTGGTCAAAGGAAGTCAGAGGGCCAAGATGAA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAGCCTTTGCACAATTTaGTTGTTGACAGGACAAGTA +
Preference number: 2 (lower is better)
Translates to: KQGGREQMESLILSHNRASLCTI*LLTGQV
Trigger: TACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAAAATGTTCATACTACTaGCATCTCTCCCCTCATGTC +
Preference number: 2 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAKCSYY*HLSPHV
Trigger: GACATGAGGGGAGAGATGTCAGTAGTATGAACATTT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCAATCAAGAAGGCCTTaGTTGGATGGAAATATATGT +
Preference number: 2 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHQSRRP*LDGNIC
Trigger: ACATATATTTCCATCCAATCAAGGCCTTCTTGATTG...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAACCCTATAAGCCTTTaGACAATTTGCTTGTTGACA +
Preference number: 2 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHNPISL*TICLLT
Trigger: TGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGTTAATCCACAAGTTTaGTGCAATAACAGGACAATC +
Preference number: 2 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHVNPQV*CNNRTI
Trigger: GATTGTCCTGTTATTGCAGCAAACTTGTGGATTAAC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCCAGATAGGTCCTGGTaGCCTCATTCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLPDRSW*PHSWRT
Trigger: AGTTCTCCAAGAATGAGGCCACCAGGACCTATCTGG...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCCAGATAGGTCCTGGTaGCCTCATTCTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGPDRSW*PHSWRT
Trigger: AGTTCTCCAAGAATGAGGCCACCAGGACCTATCTGG...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTAATCCACAAGTTTGCTaGAATAACAGGACAATCCCC +
Preference number: 2 (lower is better)
Translates to: QLAGISPKMILAPLLLKPNPQVC*NNRTIP
Trigger: GGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTGATCTACCTTCTCAGTaGTCCTCTTTCTCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: QLAGISPKMILAPLLLKPDLPSQ*SSFSSK
Trigger: CTTTGAAGAGAAAGAGGACCACTGAGAAGGTAGATC...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACTTCTTGAGATCATGTaGATTCCTAGGGTGAGTAAA +
Preference number: 2 (lower is better)
Translates to: DSLDLSPDLVTASIWPWALLEIM*IPRVSK
Trigger: TTTACTCACCCTAGGAATCCACATGATCTCAAGAAG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACCTGTCAATCCATCTTaGAATACTACTTGGTTAATC +
Preference number: 2 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAPVNPS*NTTWLI
Trigger: GATTAACCAAGTAGTATTTCAAGATGGATTGACAGG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTGCCAAGGACTATATTaGAAAAAGAACACTGGCCTA +
Preference number: 2 (lower is better)
Translates to: QLAGISPKMILAPLLLKPCQGLY*KKNTGL
Trigger: TAGGCCAGTGTTCTTTTTTCAATATAGTCCTTGGCA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTAGCCTTTGCACAATTTaGTTGTTGACAGGACAAGTA +
Preference number: 2 (lower is better)
Translates to: QLAGISPKMILAPLLLKPSLCTI*LLTGQV
Trigger: TACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCT...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 90 bp TGGAGGCTTGTGCCATTTCTTTTATGGCATAAACCCTATAAGCCTTaGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATC +
Preference number: 2 (lower is better)
Translates to: WRLVPFLLWHKPYKP*HNLLVDRTSSTLSI
Trigger: GATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAAATGGCACAAGCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAAATGTTCATACTACTaGCATCTCTCCCCTCATGTC +
Preference number: 2 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNKCSYY*HLSPHV
Trigger: GACATGAGGGGAGAGATGTCAGTAGTATGAACATTT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATTCATCTTGGCCCTCTaGCTTCCTTTGACCAATGAG +
Preference number: 2 (lower is better)
Translates to: FLDISPFIYLISIALCQGFILAL*LPLTNE
Trigger: CTCATTGGTCAAAGGAAGTCAGAGGGCCAAGATGAA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR TCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATTGGAATCTGCAAAATaGGCAACTGGGCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: FLDISPFIYLISIALCQGLESAK*ATGPEV
Trigger: AACCTCAGGCCCAGTTGCTCATTTTGCAGATTCCAA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 90 bp TTCTTTTATGGCATAAACCCTATAAGCCTTTGCACAATTTGCTTGTaGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGC +
Preference number: 2 (lower is better)
Translates to: FFYGINPISLCTICL*TGQVVHFLSSNQEG
Trigger: GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 90 bp GTGCCATTTCTTTTATGGCATAAACCCTATAAGCCTTTGCACAATTaGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCA +
Preference number: 2 (lower is better)
Translates to: VPFLLWHKPYKPLHN*LVDRTSSTLSIIQS
Trigger: TGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAAATGGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 90 bp TATAGTAATCATAGAAAGCCCTGTCAATCCATCTTGAAATACTACTaGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTG +
Preference number: 2 (lower is better)
Translates to: YSNHRKPCQSILKYY*VNPQVCCNNRTIPL
Trigger: CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGGCTTTCTATGATTACTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR GCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATTCACATTTGGAATCTaGAAAATGAGCAACTGGGCC +
Preference number: 2 (lower is better)
Translates to: FLDISPFIYLISIALCQGFTFGI*KMSNWA
Trigger: GGCCCAGTTGCTCATTTTGCAGATTCCAAATGTGAA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 90 bp CATTTCTTTTATGGCATAAACCCTATAAGCCTTTGCACAATTTGCTaGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAA +
Preference number: 2 (lower is better)
Translates to: HFFYGINPISLCTIC*LTGQVVHFLSSNQE
Trigger: TTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTATCCCAGGTCTCAGTTaGCTAATGGTAGGAAAAGAC +
Preference number: 3 (lower is better)
Translates to: VMASLWAVHISLPLHLGPIPGLS*LMVGKD
Trigger: GTCTTTTCCTACCATTAGCAAACTGAGACCTGGGAT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 72 bp AGGACAATCCCCTTGCTCAAGCAACCATCTCCACCATaGCTTCTTGAGATCATGTGGATTCCTAGGGTGAGT +
Preference number: 3 (lower is better)
Translates to: RTIPLLKQPSPP*LLEIMWIPRVS
Trigger: ACTCACCCTAGGAATCCACATGATCTCAAGAAGGCATGGTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAAGCCTTTGCACAATTaGCTTGTTGACAGGACAAGT +
Preference number: 3 (lower is better)
Translates to: VMASLWAVHISLPLHLGPKPLHN*LVDRTS
Trigger: ACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAACAGGACAATCCCCTaGCTCAAGCAACCATCTCCA +
Preference number: 3 (lower is better)
Translates to: KQGGREQMESLILSHNRANRTIP*LKQPSP
Trigger: TGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR TCA 72 bp GGAGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTaGTTCTCTCCCATAACAGGGCAGAAGAGGAACAGA +
Preference number: 3 (lower is better)
Translates to: GENKGEESRWSL*FSPITGQKRNR
Trigger: TCTGTTCCTCTTCTGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATGCACAATTTGCTTGTaGACAGGACAAGTAGTACAC +
Preference number: 3 (lower is better)
Translates to: KQGGREQMESLILSHNRACTICL*TGQVVH
Trigger: GTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTAACAGGACAATCCCCTaGCTCAAGCAACCATCTCCA +
Preference number: 3 (lower is better)
Translates to: QLAGISPKMILAPLLLKPNRTIP*LKQPSP
Trigger: TGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTT...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGTGGGGCTCATCTTATaGCACTTCTGCCATCAAGAT +
Preference number: 3 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAVGLIL*HFCHQD
Trigger: ATCTTGATGGCAGAAGTGCAATAAGATGAGCCCCAC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACAAACCCTATAAGCCTTaGCACAATTTGCTTGTTGAC +
Preference number: 3 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHKPYKP*HNLLVD
Trigger: GTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTT...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTTAGCAAATGGAGGCTaGTGCCATTTCTTTTATGGC +
Preference number: 3 (lower is better)
Translates to: RKQGGREQMESLILSHNRLANGG*CHFFYG
Trigger: GCCATAAAAGAAATGGCACAAGCCTCCATTTGCTAA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTTTGCACAATTTGCTaGTTGACAGGACAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: RKQGGREQMESLILSHNRLCTIC*LTGQVV
Trigger: TACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAAAGCCTTTGCACAATTaGCTTGTTGACAGGACAAGT +
Preference number: 3 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAKPLHN*LVDRTS
Trigger: ACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACCCTGTCAATCCATCTaGAAATACTACTTGGTTAAT +
Preference number: 3 (lower is better)
Translates to: KQGGREQMESLILSHNRAPCQSI*KYYLVN
Trigger: ATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCAATCAAGAAGGCCTaGATTGGATGGAAATATATG +
Preference number: 3 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPIKKA*IGWKYM
Trigger: CATATATTTCCATCCAATCAAGGCCTTCTTGATTGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGATCCCAGGTCTCAGTTaGCTAATGGTAGGAAAAGAC +
Preference number: 3 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRIPGLS*LMVGKD
Trigger: GTCTTTTCCTACCATTAGCAAACTGAGACCTGGGAT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR GCA 72 bp ATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTaGAATAACAGGACAATCCCCTTGCTCAAGCAACCA +
Preference number: 3 (lower is better)
Translates to: ILKYYLVNPQVC*NNRTIPLLKQP
Trigger: TGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CCA 72 bp TTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTaGGCAAGTTATCTCAGCTCTCTGAAATTCACATTT +
Preference number: 3 (lower is better)
Translates to: LSPDLVTASIWP*ASYLSSLKFTF
Trigger: AAATGTGAATTTCAGAGAGCTGAGATAACTTGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR TCA 72 bp TCTATAGTAATCATAGAAAGCCCTGTCAATCCATCTTaGAATACTACTTGGTTAATCCACAAGTTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: SIVIIESPVNPS*NTTWLIHKFAA
Trigger: TGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGGCTTTCTATGATTACTATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR TCA 72 bp TACCTAATAAGCATAGCATTATGCCAAGGACTATATTaGAAAAAGAACACTGGCCTAAGATTGATAGTCTGG +
Preference number: 3 (lower is better)
Translates to: YLISIALCQGLY*KKNTGLRLIVW
Trigger: CCAGACTATCAATCTTAGGCCAGTGTTCTTTTTTCAATATAGTCCTTGGCATAATGCTATGCTTATTAGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGGGGCTGGTGAACTCTaGGTGCCTGGGGTCACACCA +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHGAGEL*VPGVTP
Trigger: TGGTGTGACCCCAGGCACTCAGAGTTCACCAGCCCC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTTGCTGGAACGAAGCATaGGTACACCCTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPCWNEA*VHPQRE
Trigger: CTCCCTTTGAGGGTGTACTCATGCTTCGTTCCAGCA...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGCTGCCATTGGGGCCTaGAACTCGACACTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHAAIGA*NSTLPA
Trigger: TGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACTGGGGTCACACCATTaGTCCGACTGCTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRALGSHH*SDCSSG
Trigger: CCCCGAAGAGCAGTCGGAGCAATGGTGTGACCCCAG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTGAGTTCCAGGGTTGTTaGCCATCTTCTGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPEFQGC*PSSAKG
Trigger: GCCTTTGGCAGAAGATGGCCAACAACCCTGGAACTC...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAGATCGACTCTGATCTaGGGAGAGAGAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPRSTLI*GERGSR
Trigger: TCTGGAACCTCTCTCTCCTCAGATCAGAGTCGATCT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCCACTTGCCAGACGGTaGGTGTTTGTAGATAACTGC +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPPLARR*VFVDNC
Trigger: GCAGTTATCTACAAACACTCACCGTCTGGCAAGTGG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTTGTGCTTGGTGGCTTTaGTATCATCAGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPCAWWL*YHQGAG
Trigger: ACCTGCTCCCTGATGATAGCAAAGCCACCAAGCACA...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTGGGCCCATCATGGCTaGCCTTCTTCCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHWAHHG*PSSQQQ
Trigger: CTGTTGCTGGGAAGAAGGCCAGCCATGATGGGCCCA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATTGGGCCCATCATGGCTaGCCTTCTTCCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHWAHHG*PSSQQQ
Trigger: CTGTTGCTGGGAAGAAGGCCAGCCATGATGGGCCCA...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTGGGGCTGGTGAACTCTaGGTGCCTGGGGTCACACCA +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPGAGEL*VPGVTP
Trigger: TGGTGTGACCCCAGGCACTCAGAGTTCACCAGCCCC...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATGTGCTTGGGGCTGGTaGACTCTGAGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWACAWGW*TLSAWG
Trigger: ACCCCAGGCACTCAGAGTTCACCAGCCCCAAGCACA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAGACACAACCAGGGGCTaGAAATGTACCCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRADTTRG*KCTRAV
Trigger: CACTGCTCGGGTACATTTTCAGCCCCTGGTTGTGTC...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTTTGGAATCTGCAAAATaGGCAACTGGGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPLESAK*ATGPEV
Trigger: AACCTCAGGCCCAGTTGCTCATTTTGCAGATTCCAA...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACTGGGGTCACACCATTaGTCCGACTGCTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWALGSHH*SDCSSG
Trigger: CCCCGAAGAGCAGTCGGAGCAATGGTGTGACCCCAG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCTGGTGAACTCTGAGTaGCTGGGGTCACACCATTGC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLVNSE*LGSHHC
Trigger: GCAATGGTGTGACCCCAGGCACTCAGAGTTCACCAG...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAACTTCCAGCTGCCATTaGGGCCTGCAACTCGACACT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRATSSCH*GLQLDT
Trigger: AGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTCTTGGGCCCATCATaGCTGGCCTTCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRLLGPS*LAFFPA
Trigger: TGCTGGGAAGAAGGCCAGCCATGATGGGCCCAAGAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTGAGCAAACTCCACCTTaGGTTGAAGCACAAACCACT +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPEQTPP*VEAQTT
Trigger: AGTGGTTTGTGCTTCAACCCAAGGTGGAGTTTGCTC...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATGCGGTGACTCTTTGTaGGCTCCTGAGAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRACGDSL*APERYL
Trigger: AAGGTACCTCTCAGGAGCTCACAAAGAGTCACCGCA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGACACAACCAGGGGCTaGAAATGTACCCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRDTTRG*KCTRAV
Trigger: CACTGCTCGGGTACATTTTCAGCCCCTGGTTGTGTC...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGCATCCTGGCGGGTTTaGTCTTGGCTCTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHASWRV*SWLCTS
Trigger: AGAAGTACAGAGCCAAGAGCAAACCCGCCAGGATGC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGATCTGATGAGCCAGTaGTTCCCCTGTCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHDLMSQ*FPCLNQ
Trigger: CTGGTTCAGACAGGGGAAGCACTGGCTCATCAGATC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTTGTTGGCCATCTTCTaGCAAAGGCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLLAIF*QRRCSS
Trigger: GGAAGAGCAGCGCCTTTGGCAGAAGATGGCCAACAA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAGGAATCAGATCCGCTaGGAGAGAATGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPRNQIR*ERMQKT
Trigger: TGTTTTCTGCATTCTCTCCCAGCGGATCTGATTCCT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGAGTTCCAGGGTTGTTaGCCATCTTCTGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHEFQGC*PSSAKG
Trigger: GCCTTTGGCAGAAGATGGCCAACAACCCTGGAACTC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACAGCCAGATAGGTCCTaGTGGCCTCATTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAQPDRS*WPHSWR
Trigger: TCTCCAAGAATGAGGCCACCAGGACCTATCTGGCTG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAAATGTTCATACTACTaGCATCTCTCCCCTCATGTC +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPKCSYY*HLSPHV
Trigger: GACATGAGGGGAGAGATGTCAGTAGTATGAACATTT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCAGTGCACTTCCAGCTaGCATTGGGGCCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPQCTSS*HWGLQL
Trigger: GAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACTGGTGAACTCTGAGTaGCTGGGGTCACACCATTGC +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWALVNSE*LGSHHC
Trigger: GCAATGGTGTGACCCCAGGCACTCAGAGTTCACCAG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCTGCTATGGAAGGTGTaGCAGAAGTGTTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLLWKV*QKCFCG
Trigger: ACCGCAGAAACACTTCTGGCACACCTTCCATAGCAG...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCTTCTGCCATCAAGATaGTCTGGCTATCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLLPSR*SGYPFG
Trigger: GCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCCAAAGCCTTTGCTGTaGTATACAGTCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHPKPLL*YTVRQQ
Trigger: CTGCTGCCTGACTGTATACCACAGCAAAGGCTTTGG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTGTTTCCAGCTGGGTATaGCTGATAGTGTACTTTAGT +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPVSSWV*LIVYFS
Trigger: ACTAAAGTACACTATCAGCCATACCCAGCTGGAAAC...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTACATTCTTTATATCCTaGGGATGGATGCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPTFFIS*GWMPLN
Trigger: GTTCAGTGGCATCCATCCCCAGGATATAAAGAATGT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCAGTTTTGGGAGTTATaGTTTCTCCTCTGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHQFWEL*FLLWLP
Trigger: CGGCAACCAGAGGAGAAATCATAACTCCCAAAACTG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTCTCTACTGATGACTaGGGTCACAGTTCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRLSTDD*GHSSCA
Trigger: AGCACACGAACTGTGACCTCAGTCATCAGTAGAGAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACTCTTTGTGAGCTCCTaGGAGGTACCTTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRALFVSS*EVPSIA
Trigger: TGCTATTGAAGGTACCTCTCAGGAGCTCACAAAGAG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCACTTGCCAGACGGTaGGTGTTTGTAGATAACTGC +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRPLARR*VFVDNC
Trigger: GCAGTTATCTACAAACACTCACCGTCTGGCAAGTGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTTGGAATCTGCAAAATaGGCAACTGGGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLESAK*ATGPEV
Trigger: AACCTCAGGCCCAGTTGCTCATTTTGCAGATTCCAA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACAACTCGACACTCCCTaGATACCCTCAGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAQLDTP*IPSVSK
Trigger: CTTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGCTGCCATTGGGGCCTaGAACTCGACACTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGAAIGA*NSTLPA
Trigger: TGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTGCATCCTGGCGGGTTTaGTCTTGGCTCTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSASWRV*SWLCTS
Trigger: AGAAGTACAGAGCCAAGAGCAAACCCGCCAGGATGC...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGATCTGATGAGCCAGTaGTTCCCCTGTCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWADLMSQ*FPCLNQ
Trigger: CTGGTTCAGACAGGGGAAGCACTGGCTCATCAGATC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCAGACTTGCTTCTTATaGTTACAGTATCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPQTCFL*LQYPLS
Trigger: ACTCAGAGGATACTGTAAGCATAAGAAGCAAGTCTG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTATTACCAGAGTTTTGTaGTTGGTGGCTTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPITRVL*LVALLS
Trigger: TGATAGCAAAGCCACCAAGCACAAAACTCTGGTAAT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACTCCCAGAAAGATGTTaGTGGAAAAGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRALPERC*WKRPPC
Trigger: ACAAGGAGGCCTTTTCCAGCAACATCTTTCTGGGAG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAGAGCAAACTCCACCTTaGGTTGAAGCACAAACCACT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAEQTPP*VEAQTT
Trigger: AGTGGTTTGTGCTTCAACCCAAGGTGGAGTTTGCTC...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATCCTTGGAGTTGTTCTaGTGGAAGCATCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRASLELF*WKHQVL
Trigger: GAGAACCTGATGCTTCCACCAGAACAACTCCAAGGA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAAAGTCTTATTTCCTTaGAGTTGTTCTGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VMASLWAVHISLPLHLGPKVLFP*SCSGGS
Trigger: GCTTCCACCAGAACAACTCCAAGGAAATAAGACTTT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCAGATAGGTCCTGGTaGCCTCATTCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRPDRSW*PHSWRT
Trigger: AGTTCTCCAAGAATGAGGCCACCAGGACCTATCTGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACAGCCAGATAGGTCCTaGTGGCCTCATTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAQPDRS*WPHSWR
Trigger: TCTCCAAGAATGAGGCCACCAGGACCTATCTGGCTG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAATGTACCCGAGCAGTaGGGCTCATCTTATTGCACT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRANVPEQ*GSSYCT
Trigger: AGTGCAATAAGATGAGCCCCACTGCTCGGGTACATT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAATGTACCCGAGCAGTaGGGCTCATCTTATTGCACT +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHNVPEQ*GSSYCT
Trigger: AGTGCAATAAGATGAGCCCCACTGCTCGGGTACATT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGTCACAGCCTCTATATaGCCTTGGGCAAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHVTASI*PWASYL
Trigger: GAGATAACTTGCCCAAGGCCATATAGAGGCTGTGAC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACTCCAGAACATACCTTaGTCGGGTATGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRALQNIP*SGMFML
Trigger: GAGCATGAACATACCCGACCAAGGTATGTTCTGGAG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCCTGCATACCCTCAGTaGGCAAGCCTGACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNPAYPQ*ASLTRV
Trigger: GACCCTTGTCAGGCTTGCTCACTGAGGGTATGCAGG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAATGTGCTTGGGGCTGGTaGACTCTGAGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQCAWGW*TLSAWG
Trigger: ACCCCAGGCACTCAGAGTTCACCAGCCCCAAGCACA...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGAAGGATTTCACCACTaGCTTTCACGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHEGFHH*LSRCHS
Trigger: ACTATGGCAACGTGAAAGTCAGTGGTGAAATCCTTC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGATTGGTGCCTGTTCTaGTTTTGGTCTTACGCTTGT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHDWCLF*FWSYAC
Trigger: ACAAGCGTAAGACCAAAATCAGAACAGGCACCAATC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTTCATCTTGGCCCTCTaGCTTCCTTTGACCAATGAG +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRFILAL*LPLTNE
Trigger: CTCATTGGTCAAAGGAAGTCAGAGGGCCAAGATGAA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAAGGCTGGTAGTGTCTaGGTCAGCATCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSKAGSV*VSIRHI
Trigger: AATGTGCCTGATGCTGACTCAGACACTACCAGCCTT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456733.2
CDS-3UTR GCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATGTTTCCAAAGCCTTTaGTGTGGTATACAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRACFQSL*CGIQSG
Trigger: GCCTGACTGTATACCACAGCAAAGGCTTTGGAAACA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTGTTTCCAAAGCCTTTaGTGTGGTATACAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHCFQSL*CGIQSG
Trigger: GCCTGACTGTATACCACAGCAAAGGCTTTGGAAACA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATGATTTCTCCTCTGGTTaGCGATCTGAACTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHDFSSG*RSELAK
Trigger: CTTAGCAAGTTCAGATCGGCAACCAGAGGAGAAATC...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCCCCAGGGACAGACTTaGTTCTTATGCTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHPQGQT*FLCLQY
Trigger: ATACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTTGCCAGACTGAGAGCTaGAGAGTTCTTGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSCQTES*RVLVSS
Trigger: GCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCA...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCTTCTGCCATCAAGATaGTCTGGCTATCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSLLPSR*SGYPFG
Trigger: GCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCAGTGCATATTTCCCTaGCTCTTCATCTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSQCIFP*LFILAL
Trigger: GAGGGCCAAGATGAAGAGGCAGGGAAATATGCACTG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAGGAATCAGATCCGCTaGGAGAGAATGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRARNQIR*ERMQKT
Trigger: TGTTTTCTGCATTCTCTCCCAGCGGATCTGATTCCT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTTGGCGGGTTTGCTCTTaGCTCTGTACTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSWRVCS*LCTSSA
Trigger: AGCTGAAGAAGTACAGAGCCAAGAGCAAACCCGCCA...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTAGGACCAGGTTCCTaGTCATTGAGATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRLGPGS*SLRSDE
Trigger: CTCATCAGATCTCAATGACCAGGAACCTGGTCCTAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTTCCAGACACTGCTATaGAAGGTGTGCCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRFQTLL*KVCQKC
Trigger: ACACTTCTGGCACACCTTCCATAGCAGTGTCTGGAA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGTTCTTGTTTCCAGCTaGGTATGGCTGATAGTGTAC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHVLVSS*VWLIVY
Trigger: GTACACTATCAGCCATACCCAGCTGGAAACAAGAAC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAGTTCTTGTTTCCAGCTaGGTATGGCTGATAGTGTAC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAVLVSS*VWLIVY
Trigger: GTACACTATCAGCCATACCCAGCTGGAAACAAGAAC...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACCAGATAGGTCCTGGTaGCCTCATTCTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAPDRSW*PHSWRT
Trigger: AGTTCTCCAAGAATGAGGCCACCAGGACCTATCTGG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTCTGGCTATCCCTTTaGCTTAAAGAGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRLWLSL*LKEDEA
Trigger: TGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGTCATGGCTTCACTGTaGGCAGTGCATATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAVMASL*AVHISL
Trigger: CAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAAACTCCGAAAATGTTaGCCGTCTAAGTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAKLRKC*PSKSKL
Trigger: TAGCTTGGACTTAGACGGTCAACATTTTCGGAGTTT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCCCAACACTGTCAGGTaGGAAATGGCAGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNPNTVR*EMAGKQ
Trigger: CTGCTTCCCTGCCATTTCTCACCTGACAGTGTTGGG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTTTCATCTTGGCCCTCTaGCTTCCTTTGACCAATGAG +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSFILAL*LPLTNE
Trigger: CTCATTGGTCAAAGGAAGTCAGAGGGCCAAGATGAA...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACAGTGAACACAAACTCTaGTGGCCTCTTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHSEHKL*WPLVEF
Trigger: AAACTCAACAAGAGGCCAGCAGAGTTTGTGTTCACT...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCAGTGCACTTCCAGCTaGCATTGGGGCCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRQCTSS*HWGLQL
Trigger: GAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATTTTGTCACAGACAGTaGACTTCCAGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAFCHRQ*TSSCHW
Trigger: CCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCCCAGGGACAGACTTaGTTCTTATGCTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRPQGQT*FLCLQY
Trigger: ATACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATATCTTATTGCACTTCTaGCATCAAGATGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHILLHF*HQDALA
Trigger: AGCCAGAGCATCTTGATGGCAGAAGTGCAATAAGAT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCAGTGCATATTTCCCTaGCTCTTCATCTTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPQCIFP*LFILAL
Trigger: GAGGGCCAAGATGAAGAGGCAGGGAAATATGCACTG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATTTCACATTTGGAATCTaGAAAATGAGCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHFTFGI*KMSNWA
Trigger: GGCCCAGTTGCTCATTTTGCAGATTCCAAATGTGAA...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCAAAGCCTTTGCTGTaGTATACAGTCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPKPLL*YTVRQQ
Trigger: CTGCTGCCTGACTGTATACCACAGCAAAGGCTTTGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTGGCGGGTTTGCTCTTaGCTCTGTACTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPWRVCS*LCTSSA
Trigger: AGCTGAAGAAGTACAGAGCCAAGAGCAAACCCGCCA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCTTGGGCCCATCATaGCTGGCCTTCTTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLLGPS*LAFFPA
Trigger: TGCTGGGAAGAAGGCCAGCCATGATGGGCCCAAGAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATTCCAGACACTGCTATaGAAGGTGTGCCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAFQTLL*KVCQKC
Trigger: ACACTTCTGGCACACCTTCCATAGCAGTGTCTGGAA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCTGAGTAGCAGTGGTTaGATCTTCAAGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRLSSSG*IFKKVN
Trigger: ATTCACCTTCTTGAAGATTCAACCACTGCTACTCAG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGACCTGCATACCCTCAGTaGGCAAGCCTGACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGPAYPQ*ASLTRV
Trigger: GACCCTTGTCAGGCTTGCTCACTGAGGGTATGCAGG...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCAGGTTCCTGGTCATTaGGATCTGATGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNQVPGH*DLMSQC
Trigger: GCACTGGCTCATCAGATCTCAATGACCAGGAACCTG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTGCGGTGACTCTTTGTaGGCTCCTGAGAGGTACCTT +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLCGDSL*APERYL
Trigger: AAGGTACCTCTCAGGAGCTCACAAAGAGTCACCGCA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGAAGGATTTCACCACTaGCTTTCACGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAEGFHH*LSRCHS
Trigger: ACTATGGCAACGTGAAAGTCAGTGGTGAAATCCTTC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACGATTTCTGCAATTCTTaGCAAAAATGTACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHDFCNS*QKCTAH
Trigger: GTGGGCTGTACATTTTTGTCAAGAATTGCAGAAATC...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATGCCAAGGACTATATTaGAAAAAGAACACTGGCCTA +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRACQGLY*KKNTGL
Trigger: TAGGCCAGTGTTCTTTTTTCAATATAGTCCTTGGCA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATCAGAGGCTAGAATATaGCTCCAGAACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWASEARI*LQNIPW
Trigger: CCAAGGTATGTTCTGGAGTCATATTCTAGCCTCTGA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCATTATATGAACTCGCATaGAAAAATGAGCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRALYELA*KNELRG
Trigger: GCCTCTGAGCTCATTTTTTCATGCGAGTTCATATAA...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACCAGACTTGCTTCTTATaGTTACAGTATCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHQTCFL*LQYPLS
Trigger: ACTCAGAGGATACTGTAAGCATAAGAAGCAAGTCTG...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCTCCCAGAAAGATGTTaGTGGAAAAGGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPLPERC*WKRPPC
Trigger: ACAAGGAGGCCTTTTCCAGCAACATCTTTCTGGGAG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTGGTCGGGTATGTTCATaGTCAAGTAATCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSGRVCS*SSNQTL
Trigger: CAGAGTCTGATTACTTGAGCATGAACATACCCGACC...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAAAGTCTTATTTCCTTaGAGTTGTTCTGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAKVLFP*SCSGGS
Trigger: GCTTCCACCAGAACAACTCCAAGGAAATAAGACTTT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGACATTCTTTATATCCTaGGGATGGATGCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRTFFIS*GWMPLN
Trigger: GTTCAGTGGCATCCATCCCCAGGATATAAAGAATGT...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTGGTGGCCTCATTCTTaGAGAACTGGTCCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPWWPHS*RTGPFR
Trigger: TCTAAAGGGACCAGTTCTCCAAGAATGAGGCCACCA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGATCTACCTTCTCAGTaGTCCTCTTTCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRDLPSQ*SSFSSK
Trigger: CTTTGAAGAGAAAGAGGACCACTGAGAAGGTAGATC...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCTCTGGCTATCCCTTTaGCTTAAAGAGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPLWLSL*LKEDEA
Trigger: TGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTGCCATCAAGATGCTCTaGCTATCCCTTTGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSAIKML*LSLWLK
Trigger: TTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGC...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCTGCTGGCCTCTTGTTaGGTTTTCCCACTTCTACGT +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNLLASC*VFPLLR
Trigger: ACGTAGAAGTGGGAAAACTCAACAAGAGGCCAGCAG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAAACTCCGAAAATGTTaGCCGTCTAAGTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSKLRKC*PSKSKL
Trigger: TAGCTTGGACTTAGACGGTCAACATTTTCGGAGTTT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCAGGTTCCTGGTCATTaGGATCTGATGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRQVPGH*DLMSQC
Trigger: GCACTGGCTCATCAGATCTCAATGACCAGGAACCTG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTGATTGGTGCCTGTTCTaGTTTTGGTCTTACGCTTGT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPDWCLF*FWSYAC
Trigger: ACAAGCGTAAGACCAAAATCAGAACAGGCACCAATC...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTCCAGAGATTACAGGTaGCTCCTTCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPSRDYR*LLLLSL
Trigger: AAGGGAAAGAAGAAGGAGTCACCTGTAATCTCTGGA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTATCAGAAGTGCCTCCTaGCTTCACTGCTGTCAAATT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPIRSAS*LHCCQI
Trigger: AATTTGACAGCAGTGAAGTCAGGAGGCACTTCTGAT...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTGCTGGAACGAAGCATaGGTACACCCTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRCWNEA*VHPQRE
Trigger: CTCCCTTTGAGGGTGTACTCATGCTTCGTTCCAGCA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACAATCAAGAAGGCCTTaGTTGGATGGAAATATATGT +
Preference number: 4 (lower is better)
Translates to: KQGGREQMESLILSHNRAQSRRP*LDGNIC
Trigger: ACATATATTTCCATCCAATCAAGGCCTTCTTGATTG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCCTGTCAATCCATCTTaGAATACTACTTGGTTAATC +
Preference number: 4 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHPVNPS*NTTWLI
Trigger: GATTAACCAAGTAGTATTTCAAGATGGATTGACAGG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTGCCAAGGACTATATTaGAAAAAGAACACTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRCQGLY*KKNTGL
Trigger: TAGGCCAGTGTTCTTTTTTCAATATAGTCCTTGGCA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCGAGAACATTGACTTaGTTGAAACGTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRPRTLT*LKRFAF
Trigger: AAAGGCAAAACGTTTCAAGCAAGTCAATGTTCTCGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCAGAGGTTCCAGACACTaGTATGGAAGGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGRGSRH*YGRCAR
Trigger: TCTGGCACACCTTCCATAGCAGTGTCTGGAACCTCT...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGTGTTTGTAGATAACTaGGAGGACACTAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAVFVDN*EDTKAS
Trigger: TGATGCCTTAGTGTCCTCGCAGTTATCTACAAACAC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACAACCCTATAAGCCTTTaGACAATTTGCTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHNPISL*TICLLT
Trigger: TGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTT...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAATCCACAAGTTTGCTaGAATAACAGGACAATCCCC +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSNPQVC*NNRTIP
Trigger: GGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATTCACATTTGGAATCTaGAAAATGAGCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAFTFGI*KMSNWA
Trigger: GGCCCAGTTGCTCATTTTGCAGATTCCAAATGTGAA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAACTTCCAGCTGCCATTaGGGCCTGCAACTCGACACT +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGTSSCH*GLQLDT
Trigger: AGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCAGAGTTTTGTGCTTaGTGGCTTTGCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPEFCA*WLCYHQ
Trigger: CTGATGATAGCAAAGCCACCAAGCACAAAACTCTGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGGTCATGGCTTCACTGTaGGCAGTGCATATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLVMASL*AVHISL
Trigger: CAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCAGTTTTGGGAGTTATaGTTTCTCCTCTGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLQFWEL*FLLWLP
Trigger: CGGCAACCAGAGGAGAAATCATAACTCCCAAAACTG...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCTCTACTGATGACTaGGGTCACAGTTCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLSTDD*GHSSCA
Trigger: AGCACACGAACTGTGACCTCAGTCATCAGTAGAGAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAAGATCGACTCTGATCTaGGGAGAGAGAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQRSTLI*GERGSR
Trigger: TCTGGAACCTCTCTCTCCTCAGATCAGAGTCGATCT...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAACTTTAGTGTTTCATTaGATTCTGGATTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWATLVFH*ILDWCL
Trigger: CAGGCACCAATCCAGAATTCAATGAAACACTAAAGT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATATCATAGTGCCAGACTaGGAGCTGCAGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNIIVPD*ELQSSC
Trigger: ACAAGAACTCTGCAGCTCTCAGTCTGGCACTATGAT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCATCATAGTGCCAGACTaGGAGCTGCAGAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGIIVPD*ELQSSC
Trigger: ACAAGAACTCTGCAGCTCTCAGTCTGGCACTATGAT...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACTCCACCTTGGGTTaGAGCACAAACCACTCATCA +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNNSTLG*STNHSS
Trigger: TGATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGTT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCTGTCAATCCATCTTaGAATACTACTTGGTTAATC +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRPVNPS*NTTWLI
Trigger: GATTAACCAAGTAGTATTTCAAGATGGATTGACAGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGAGCAGATGGAGTCTTTaGTTCTCTCCCATAACAGGG +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLSRWSL*FSPITG
Trigger: CCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCT...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTTTTGTCACAGACAGTaGACTTCCAGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLFCHRQ*TSSCHW
Trigger: CCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTGCTATGGAAGGTGTaGCAGAAGTGTTTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLLWKV*QKCFCG
Trigger: ACCGCAGAAACACTTCTGGCACACCTTCCATAGCAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTGCCAGACTGAGAGCTaGAGAGTTCTTGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRCQTES*RVLVSS
Trigger: GCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTGCTGTCAAATTCTTTaGCTCTTTGATGAACACTTC +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRCCQIL*LFDEHF
Trigger: GAAGTGTTCATCAAAGAGGCAAAGAATTTGACAGCA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTGTGCTTGGTGGCTTTaGTATCATCAGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRCAWWL*YHQGAG
Trigger: ACCTGCTCCCTGATGATAGCAAAGCCACCAAGCACA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATTGTTGGCCATCTTCTaGCAAAGGCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGLLAIF*QRRCSS
Trigger: GGAAGAGCAGCGCCTTTGGCAGAAGATGGCCAACAA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAGCCTTTGCACAATTTaGTTGTTGACAGGACAAGTA +
Preference number: 4 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSSLCTI*LLTGQV
Trigger: TACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTGTTTCATTGAATTCTaGATTGGTGCCTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RKQGGREQMESLILSHNRCFIEF*IGACSD
Trigger: ATCAGAACAGGCACCAATCCAGAATTCAATGAAACA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATTGGTGGCCTCATTCTTaGAGAACTGGTCCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNWWPHS*RTGPFR
Trigger: TCTAAAGGGACCAGTTCTCCAAGAATGAGGCCACCA...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCTTTGTGAGCTCCTaGGAGGTACCTTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLFVSS*EVPSIA
Trigger: TGCTATTGAAGGTACCTCTCAGGAGCTCACAAAGAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTACTTTAGTGTTTCATTaGATTCTGGATTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPTLVFH*ILDWCL
Trigger: CAGGCACCAATCCAGAATTCAATGAAACACTAAAGT...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGAACTCCACCTTGGGTTaGAGCACAAACCACTCATCA +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRNSTLG*STNHSS
Trigger: TGATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGTT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCCAGAGATTACAGGTaGCTCCTTCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGSRDYR*LLLLSL
Trigger: AAGGGAAAGAAGAAGGAGTCACCTGTAATCTCTGGA...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAAGCAGATGGAGTCTTTaGTTCTCTCCCATAACAGGG +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQSRWSL*FSPITG
Trigger: CCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCT...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATTCAGAGGCTAGAATATaGCTCCAGAACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNSEARI*LQNIPW
Trigger: CCAAGGTATGTTCTGGAGTCATATTCTAGCCTCTGA...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCGAGAACATTGACTTaGTTGAAACGTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPRTLT*LKRFAF
Trigger: AAAGGCAAAACGTTTCAAGCAAGTCAATGTTCTCGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGATTTCTCCTCTGGTTaGCGATCTGAACTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGDFSSG*RSELAK
Trigger: CTTAGCAAGTTCAGATCGGCAACCAGAGGAGAAATC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAAGAGGTTCCAGACACTaGTATGGAAGGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGRGSRH*YGRCAR
Trigger: TCTGGCACACCTTCCATAGCAGTGTCTGGAACCTCT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGTTAATCCACAAGTTTaGTGCAATAACAGGACAATC +
Preference number: 4 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAVNPQV*CNNRTI
Trigger: GATTGTCCTGTTATTGCAGCAAACTTGTGGATTAAC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATGGTCGGGTATGTTCATaGTCAAGTAATCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNGRVCS*SSNQTL
Trigger: CAGAGTCTGATTACTTGAGCATGAACATACCCGACC...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTAGGACCAGGTTCCTaGTCATTGAGATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLGPGS*SLRSDE
Trigger: CTCATCAGATCTCAATGACCAGGAACCTGGTCCTAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTTGGAGTTGTTCTGGTaGAAGCATCAGGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLLELFW*KHQVLF
Trigger: GAAGAGAACCTGATGCTTCCACCAGAACAACTCCAA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTCCTTGGAGTTGTTCTaGTGGAAGCATCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRSLELF*WKHQVL
Trigger: GAGAACCTGATGCTTCCACCAGAACAACTCCAAGGA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATGAGTTTTGTGCTTGGTaGCTTTGCTATCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNEFCAW*LCYHQG
Trigger: TCCCTGATGATAGCAAAGCCACCAAGCACAAAACTC...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGAGTTTTGTGCTTGGTaGCTTTGCTATCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGEFCAW*LCYHQG
Trigger: TCCCTGATGATAGCAAAGCCACCAAGCACAAAACTC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGCCATCAAGATGCTCTaGCTATCCCTTTGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGAIKML*LSLWLK
Trigger: TTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGTCACAGCCTCTATATaGCCTTGGGCAAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRVTASI*PWASYL
Trigger: GAGATAACTTGCCCAAGGCCATATAGAGGCTGTGAC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGATCAGAAGTGCCTCCTaGCTTCACTGCTGTCAAATT +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRIRSAS*LHCCQI
Trigger: AATTTGACAGCAGTGAAGTCAGGAGGCACTTCTGAT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTGTTATCTCAGCTCTCTaGAATTCACATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPVISAL*NSHLES
Trigger: AGATTCCAAATGTGAATTTCAGAGAGCTGAGATAAC...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTTTTTACAAGGTCTCTaGAGAATTGCGTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPFLQGL*RIAYGS
Trigger: ACTACCATACGCAATTCTGCAGAGACCTTGTAAAAA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGATCTTATTGCACTTCTaGCATCAAGATGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLILLHF*HQDALA
Trigger: AGCCAGAGCATCTTGATGGCAGAAGTGCAATAAGAT...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGAACACAAACTCTGCTaGCCTCTTGTTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRREHKLC*PLVEFS
Trigger: GGAAAACTCAACAAGAGGCCAGCAGAGTTTGTGTTC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTGTTTCATTGAATTCTaGATTGGTGCCTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: QLAGISPKMILAPLLLKPCFIEF*IGACSD
Trigger: ATCAGAACAGGCACCAATCCAGAATTCAATGAAACA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAATTGGAGTTGTTCTGGTaGAAGCATCAGGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQLELFW*KHQVLF
Trigger: GAAGAGAACCTGATGCTTCCACCAGAACAACTCCAA...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATGATCTACCTTCTCAGTaGTCCTCTTTCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNDLPSQ*SSFSSK
Trigger: CTTTGAAGAGAAAGAGGACCACTGAGAAGGTAGATC...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGACTCCAGAACATACCTTaGTCGGGTATGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGLQNIP*SGMFML
Trigger: GAGCATGAACATACCCGACCAAGGTATGTTCTGGAG...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAACTGAGTAGCAGTGGTTaGATCTTCAAGAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQLSSSG*IFKKVN
Trigger: ATTCACCTTCTTGAAGATTCAACCACTGCTACTCAG...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGATTTCTGCAATTCTTaGCAAAAATGTACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGDFCNS*QKCTAH
Trigger: GTGGGCTGTACATTTTTGTCAAGAATTGCAGAAATC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGTGTTTGTAGATAACTaGGAGGACACTAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRVFVDN*EDTKAS
Trigger: TGATGCCTTAGTGTCCTCGCAGTTATCTACAAACAC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATGACTTCTTCTTAAAATaGACTGTCGGACAACATCAG +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNDFFLK*TVGQHQ
Trigger: CTGATGTTGTCCGACAGTCCATTTTAAGAAGAAGTC...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGTTTCCAGCTGGGTATaGCTGATAGTGTACTTTAGT +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRVSSWV*LIVYFS
Trigger: ACTAAAGTACACTATCAGCCATACCCAGCTGGAAAC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGACCAGAGTTTTGTGCTTaGTGGCTTTGCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGPEFCA*WLCYHQ
Trigger: CTGATGATAGCAAAGCCACCAAGCACAAAACTCTGG...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCTTCTTGAGATCATGTaGATTCCTAGGGTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGLLEIM*IPRVSK
Trigger: TTTACTCACCCTAGGAATCCACATGATCTCAAGAAG...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 72 bp GGCATAAACCCTATAAGCCTTTGCACAATTTGCTTGTaGACAGGACAAGTAGTACACTTTCTATCATCCAAT +
Preference number: 4 (lower is better)
Translates to: GINPISLCTICL*TGQVVHFLSSN
Trigger: ATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 72 bp TATGGCATAAACCCTATAAGCCTTTGCACAATTTGCTaGTTGACAGGACAAGTAGTACACTTTCTATCATCC +
Preference number: 4 (lower is better)
Translates to: YGINPISLCTIC*LTGQVVHFLSS
Trigger: GGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 72 bp GTGCCATTTCTTTTATGGCATAAACCCTATAAGCCTTaGCACAATTTGCTTGTTGACAGGACAAGTAGTACA +
Preference number: 4 (lower is better)
Translates to: VPFLLWHKPYKP*HNLLVDRTSST
Trigger: TGTACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTTATGCCATAAAAGAAATGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCAGATTGATGAACTCTaGGTTCTTAGACATGGTATT +
Preference number: 4 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGQIDEL*VLRHGI
Trigger: AATACCATGTCTAAGAACTCAGAGTTCATCAATCTG...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCAGATTGATGAACTCTaGGTTCTTAGACATGGTATT +
Preference number: 4 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNQIDEL*VLRHGI
Trigger: AATACCATGTCTAAGAACTCAGAGTTCATCAATCTG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCAATCAAGAAGGCCTTaGTTGGATGGAAATATATGT +
Preference number: 4 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLQSRRP*LDGNIC
Trigger: ACATATATTTCCATCCAATCAAGGCCTTCTTGATTG...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGATTACCAGAGTTTTGTaGTTGGTGGCTTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRITRVL*LVALLS
Trigger: TGATAGCAAAGCCACCAAGCACAAAACTCTGGTAAT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAAATCCACAAGTTTGCTaGAATAACAGGACAATCCCC +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGNPQVC*NNRTIP
Trigger: GGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAATTTATATCCTGGGGATaGATGCCACTGAACATGAAT +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQFISWG*MPLNMN
Trigger: ATTCATGTTCAGTGGCATCCATCCCCAGGATATAAA...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR TCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGTTATCTCAGCTCTCTaGAATTCACATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQVISAL*NSHLES
Trigger: AGATTCCAAATGTGAATTTCAGAGAGCTGAGATAAC...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTGCTGTCAAATTCTTTaGCTCTTTGATGAACACTTC +
Preference number: 4 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRCCQIL*LFDEHF
Trigger: GAAGTGTTCATCAAAGAGGCAAAGAATTTGACAGCA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGTTAATCCACAAGTTTaGTGCAATAACAGGACAATC +
Preference number: 4 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQVNPQV*CNNRTI
Trigger: GATTGTCCTGTTATTGCAGCAAACTTGTGGATTAAC...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAGACTTCTTCTTAAAATaGACTGTCGGACAACATCAG +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGDFFLK*TVGQHQ
Trigger: CTGATGTTGTCCGACAGTCCATTTTAAGAAGAAGTC...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR GCA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATTTTTACAAGGTCTCTaGAGAATTGCGTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: FLDISPFIYLISIALCQGFLQGL*RIAYGS
Trigger: ACTACCATACGCAATTCTGCAGAGACCTTGTAAAAA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
3UTR CAA 72 bp TTCTATAGTAATCATAGAAAGCCCTGTCAATCCATCTaGAAATACTACTTGGTTAATCCACAAGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FYSNHRKPCQSI*KYYLVNPQVCC
Trigger: GCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGGCTTTCTATGATTACTATAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS GCA 90 bp CAGTGCACTTCCAGCTGCCATTGGGGCCTGCAACTCGACACTCCCTaGATACCCTCAGTGAGCAAGCCTGACAAGGGTCTCCCCGGTCAA +
Preference number: 5 (lower is better)
Translates to: QCTSSCHWGLQLDTP*IPSVSKPDKGLPGQ
Trigger: TTGACCGGGGAGACCCTTGTCAGGCTTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCCTGGGGTCACACCATaGCTCCGACTGCTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPPGVTP*LRLLFG
Trigger: CCCGAAGAGCAGTCGGAGCAATGGTGTGACCCCAGG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CCA 90 bp TTAGCTGCGCGATTTTGTCACAGACAGTGCACTTCCAGCTGCCATTaGGGCCTGCAACTCGACACTCCCTGCATACCCTCAGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: LAARFCHRQCTSSCH*GLQLDTPCIPSVSK
Trigger: CTTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAATCGCGCAGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCTGGCGGGTTTGCTCTaGGCTCTGTACTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPLAGLL*ALYFFS
Trigger: GCTGAAGAAGTACAGAGCCAAGAGCAAACCCGCCAG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCACTTCCAGCTGCCATaGGGGCCTGCAACTCGACAC +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHHFQLP*GPATRH
Trigger: GTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCCTCCCAGAAAGATGTaGCTGGAAAAGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPPPRKM*LEKASL
Trigger: CAAGGAGGCCTTTTCCAGCAACATCTTTCTGGGAGG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 90 bp ACTGGTCCCTTTAGAGCCTACATTTTCCCATGCTGGAACGAAGCATaGGTACACCCTCAAAGGGAGTTCCAGGGTTGTTGGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: TGPFRAYIFPCWNEA*VHPQREFQGCWPSS
Trigger: AGAAGATGGCCAACAACCCTGGAACTCCCTTTGAGGGTGTACTCATGCTTCGTTCCAGCATGGGAAAATGTAGGCTCTAAAGGGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTGCATCCTGGCGGGTTaGCTCTTGGCTCTGTACTTC +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRCILAG*LLALYF
Trigger: GAAGTACAGAGCCAAGAGCAAACCCGCCAGGATGCA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGAGAAATCCCTTTCTCTaGGGCCCATCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRRNPFL*GPSWLA
Trigger: GGCCAGCCATGATGGGCCCAAGAGAAAGGGATTTCT...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTTTGTTGTTCCGGGACTaGTCAGGAAGAAGATATGAC +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPLLFRD*SGRRYD
Trigger: GTCATATCTTCTTCCTGACAAGTCCCGGAACAACAA...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAGAGCTGCAGAGTTCTaGTTTCCAGCTGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHRAAEF*FPAGYG
Trigger: GCCATACCCAGCTGGAAACAAGAACTCTGCAGCTCT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTCTTATTTCCTTGGAGTaGTTCTGGTGGAAGCATCAG +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPLISLE*FWWKHQ
Trigger: CTGATGCTTCCACCAGAACAACTCCAAGGAAATAAG...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAAGGGAGTTCCAGGGTaGTTGGCCATCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: KQGGREQMESLILSHNRAKGVPG*LAIFCQ
Trigger: TTGGCAGAAGATGGCCAACAACCCTGGAACTCCCTT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGCCTGCATCCTCACTCTaGTCATGGCTTCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRPASSL*SWLHCG
Trigger: CCCACAGTGAAGCCATGACAAGAGTGAGGATGCAGG...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 90 bp TTCCCCGAGGAAGCTATTACGTCCAAATCGATCATAGTGCCAGACTaGGAGCTGCAGAGTTCTTGTTTCCAGCTGGGTATGGCTGATAGT +
Preference number: 5 (lower is better)
Translates to: FPEEAITSKSIIVPD*ELQSSCFQLGMADS
Trigger: ACTATCAGCCATACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCACTATGATCGATTTGGACGTAATAGCTTCCTCGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTTGCATCCTGGCGGGTTaGCTCTTGGCTCTGTACTTC +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSCILAG*LLALYF
Trigger: GAAGTACAGAGCCAAGAGCAAACCCGCCAGGATGCA...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCCTGGGGTCACACCATaGCTCCGACTGCTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNPGVTP*LRLLFG
Trigger: CCCGAAGAGCAGTCGGAGCAATGGTGTGACCCCAGG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATCACAGTTCGTGTGCTaGGGGCTGGTGAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWASQFVC*GLVNSE
Trigger: CTCAGAGTTCACCAGCCCCAAGCACACGAACTGTGA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAGGAGTTCCAGGGTTGTaGGCCATCTTCTGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAGVPGL*AIFCQR
Trigger: CCTTTGGCAGAAGATGGCCAACAACCCTGGAACTCC...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTTGCACAATTTGCTTGTaGACAGGACAAGTAGTACAC +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPCTICL*TGQVVH
Trigger: GTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GTCATGGCTTCACTGTGGGCAGTGCATATTTCCCTGCCTCTTCATCTTGGCCCTAAGGTCTCTGCAGAATaGCGTATGGTAGTTAAGTAT +
Preference number: 5 (lower is better)
Translates to: VMASLWAVHISLPLHLGPKVSAE*RMVVKY
Trigger: ATACTTAACTACCATACGCAATTCTGCAGAGACCTT...AGGGCCAAGATGAAGAGGCAGGGAAATATGCACTGCCCACAGTGAAGCCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTCTGCTGGCCTCTTGTaGAGTTTTCCCACTTCTACG +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRSAGLL*SFPTST
Trigger: CGTAGAAGTGGGAAAACTCAACAAGAGGCCAGCAGA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAACTCTGCTGGCCTCTaGTTGAGTTTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHNSAGL*LSFPTS
Trigger: AGAAGTGGGAAAACTCAACAAGAGGCCAGCAGAGTT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCTGGCGGGTTTGCTCTaGGCTCTGTACTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPLAGLL*ALYFFS
Trigger: GCTGAAGAAGTACAGAGCCAAGAGCAAACCCGCCAG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACCAGGTTCCTGGTCATaGAGATCTGATGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAPGSWS*RSDEPV
Trigger: CACTGGCTCATCAGATCTCAATGACCAGGAACCTGG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTCACAGTTCGTGTGCTaGGGGCTGGTGAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPSQFVC*GLVNSE
Trigger: CTCAGAGTTCACCAGCCCCAAGCACACGAACTGTGA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTTGGTCTTACGCTTGTaGTTCCGGGACTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRLVLRL*FRDLSG
Trigger: TCCTGACAAGTCCCGGAACAACAAGCGTAAGACCAA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAAGAGCTGCAGAGTTCTaGTTTCCAGCTGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWARAAEF*FPAGYG
Trigger: GCCATACCCAGCTGGAAACAAGAACTCTGCAGCTCT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATCTGGAAAAGGCCTCCTaGTCCCAGATAGTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHLEKAS*SQIVSS
Trigger: AGAACTTACTATCTGGGACAAGGAGGCCTTTTCCAG...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCCTGCATCCTCACTCTaGTCATGGCTTCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPPASSL*SWLHCG
Trigger: CCCACAGTGAAGCCATGACAAGAGTGAGGATGCAGG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 90 bp ATCATGCTGTTAAGGCTGGTAGTTGATAGGCCACTTGCCAGACGGTaGGTGTTTGTAGATAACTGCGAGGACACTAAGGCATCAATGCTT +
Preference number: 5 (lower is better)
Translates to: IMLLRLVVDRPLARR*VFVDNCEDTKASML
Trigger: AAGCATTGATGCCTTAGTGTCCTCGCAGTTATCTACAAACACTCACCGTCTGGCAAGTGGCCTATCAACTACCAGCCTTAACAGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297875.7
CDS TCA 90 bp ATCAGGGAGCAGGTAGCCCTTCACAAAGCTATCAGAAGTGCCTCCTaGCTTCACTGCTGTCAAATTCTTTGCCTCTTTGATGAACACTTC +
Preference number: 5 (lower is better)
Translates to: IREQVALHKAIRSAS*LHCCQILCLFDEHF
Trigger: GAAGTGTTCATCAAAGAGGCAAAGAATTTGACAGCAGTGAAGTCAGGAGGCACTTCTGATAGCTTTGTGAAGGGCTACCTGCTCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAACACTTCCAGCTGCCATaGGGGCCTGCAACTCGACAC +
Preference number: 5 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQHFQLP*GPATRH
Trigger: GTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTG...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATTTGTTGTTCCGGGACTaGTCAGGAAGAAGATATGAC +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHLLFRD*SGRRYD
Trigger: GTCATATCTTCTTCCTGACAAGTCCCGGAACAACAA...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATTGGTCTTACGCTTGTaGTTCCGGGACTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWALVLRL*FRDLSG
Trigger: TCCTGACAAGTCCCGGAACAACAAGCGTAAGACCAA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATATTTTGGTCTTACGCTaGTTGTTCCGGGACTTGTCA +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHILVLR*LFRDLS
Trigger: TGACAAGTCCCGGAACAACAAGCGTAAGACCAAAAT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGATGTTTCCAAAGCCTTaGCTGTGGTATACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRMFPKP*LWYTVR
Trigger: CCTGACTGTATACCACAGCAAAGGCTTTGGAAACAT...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAAACTCTGCTGGCCTCTaGTTGAGTTTTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWANSAGL*LSFPTS
Trigger: AGAAGTGGGAAAACTCAACAAGAGGCCAGCAGAGTT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTCTTAGCTGCGCGATTTaGTCACAGACAGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPLSCAI*SQTVHF
Trigger: GAAGTGCACTGTCTGTGACAAAATCGCGCAGCTAAG...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGAGAAATCCCTTTCTCTaGGGCCCATCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLRNPFL*GPSWLA
Trigger: GGCCAGCCATGATGGGCCCAAGAGAAAGGGATTTCT...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAAACTCCACCTTGGGTaGAAGCACAAACCACTCATC +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSKLHLG*KHKPLI
Trigger: GATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGTTT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGATCCCAGGTCTCAGTTaGCTAATGGTAGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRIPGLS*LMVGKD
Trigger: GTCTTTTCCTACCATTAGCAAACTGAGACCTGGGAT...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTTAGCAAATGGAGGCTaGTGCCATTTCTTTTATGGC +
Preference number: 5 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHLANGG*CHFFYG
Trigger: GCCATAAAAGAAATGGCACAAGCCTCCATTTGCTAA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCTCCACCATGCCTTCTaGAGATCATGTGGATTCCTA +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSLHHAF*RSCGFL
Trigger: TAGGAATCCACATGATCTCAAGAAGGCATGGTGGAG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCAACTCCAGAACATACCTaGGTCGGGTATGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWATPEHT*VGYVHA
Trigger: AGCATGAACATACCCGACCAAGGTATGTTCTGGAGT...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGTCAGTGCCGAGAACATaGACTTGCTTGAAACGTTTT +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRSVPRT*TCLKRF
Trigger: AAAACGTTTCAAGCAAGTCAATGTTCTCGGCACTGA...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGTTGCCGATCTGAACTaGCTAAGAAGAAATCCCTTT +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRVADLN*LRRNPF
Trigger: AAAGGGATTTCTTCTTAGCAAGTTCAGATCGGCAAC...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCCAGGTTCCTGGTCATaGAGATCTGATGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLPGSWS*RSDEPV
Trigger: CACTGGCTCATCAGATCTCAATGACCAGGAACCTGG...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATTCTTCCAAGGAGTCCTaGTCTAAAGCCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNSSKES*SKAPGT
Trigger: TGTCCCTGGGGCTTTAGACAAGGACTCCTTGGAAGA...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCTTCCAAGGAGTCCTaGTCTAAAGCCCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGSSKES*SKAPGT
Trigger: TGTCCCTGGGGCTTTAGACAAGGACTCCTTGGAAGA...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTATTTTGGTCTTACGCTaGTTGTTCCGGGACTTGTCA +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSILVLR*LFRDLS
Trigger: TGACAAGTCCCGGAACAACAAGCGTAAGACCAAAAT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCACAAACCACTCATCAGTaGGATTTTCAAAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: KQGGREQMESLILSHNRAQTTHQ*DFQSSM
Trigger: CATGGAACTTTGAAAATCCAACTGATGAGTGGTTTG...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCTTATTTCCTTGGAGTaGTTCTGGTGGAAGCATCAG +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSLISLE*FWWKHQ
Trigger: CTGATGCTTCCACCAGAACAACTCCAAGGAAATAAG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CTTCTGCCATCAAGATGCTCTGGCTATCCCTTTGGCTTAAAGAGGATGAGGCATAAAAGTCTTATTTCCTaGGAGTTGTTCTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLPSRCSGYPFGLKRMRHKSLIS*ELFWWK
Trigger: CTTCCACCAGAACAACTCCAAGGAAATAAGACTTTT...ATGCCTCATCCTCTTTAAGCCAAAGGGATAGCCAGAGCATCTTGATGGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTTGTGCTTGGTGGCTTaGCTATCATCAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLLCLVA*LSSGSR
Trigger: CCTGCTCCCTGATGATAGCAAAGCCACCAAGCACAA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTACCAGAGTTTTGTGCTaGGTGGCTTTGCTATCATCA +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSTRVLC*VALLSS
Trigger: TGATGATAGCAAAGCCACCAAGCACAAAACTCTGGT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCCACTTTATTACCAGAGTTTaGTGCTTGGTGGCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: HKFAAITGQSPCSSNHLHFITRV*CLVALL
Trigger: TAGCAAAGCCACCAAGCACAAAACTCTGGTAATAAA...GTGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGGAGTTCCAGGGTTGTaGGCCATCTTCTGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRGVPGL*AIFCQR
Trigger: CCTTTGGCAGAAGATGGCCAACAACCCTGGAACTCC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGGCAAAACCCTATAAGCCTTaGCACAATTTGCTTGTTGAC +
Preference number: 5 (lower is better)
Translates to: KQGGREQMESLILSHNRAKPYKP*HNLLVD
Trigger: GTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTT...TGCCCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTCTGCTGGCCTCTTGTaGAGTTTTCCCACTTCTACG +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLSAGLL*SFPTST
Trigger: CGTAGAAGTGGGAAAACTCAACAAGAGGCCAGCAGA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATGCCCCAGGGACAGACTaGCTTCTTATGCTTACAGTA +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNAPGTD*LLMLTV
Trigger: TACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGGC...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTTGTGCTTGGTGGCTTaGCTATCATCAGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLCLVA*LSSGSR
Trigger: CCTGCTCCCTGATGATAGCAAAGCCACCAAGCACAA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCTCCCAGAAAGATGTaGCTGGAAAAGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRPPRKM*LEKASL
Trigger: CAAGGAGGCCTTTTCCAGCAACATCTTTCTGGGAGG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AGAAAACAAGGGGGAAGAGAGCAGATGGAGTCTTTGATTCTCTCCCATAACAGGAAACCCTATAAGCCTTaGCACAATTTGCTTGTTGAC +
Preference number: 5 (lower is better)
Translates to: RKQGGREQMESLILSHNRKPYKP*HNLLVD
Trigger: GTCAACAAGCAAATTGTGCAAAGGCTTATAGGGTTT...CCTGTTATGGGAGAGAATCAAAGACTCCATCTGCTCTCTTCCCCCTTGTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCAACAGGACAATCCCCTaGCTCAAGCAACCATCTCCA +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGNRTIP*LKQPSP
Trigger: TGGAGATGGTTGCTTGAGCAAGGGGATTGTCCTGTT...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTTAGCTGCGCGATTTaGTCACAGACAGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLSCAI*SQTVHF
Trigger: GAAGTGCACTGTCTGTGACAAAATCGCGCAGCTAAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAAACTCCACCTTGGGTaGAAGCACAAACCACTCATC +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNKLHLG*KHKPLI
Trigger: GATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGTTT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCAGCTCTCCTTTGTATaGAAGGCCAATATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGQLSFV*KANIRS
Trigger: GCTCCTGATATTGGCCTTCAATACAAAGGAGAGCTG...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATCTGGAAAAGGCCTCCTaGTCCCAGATAGTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNLEKAS*SQIVSS
Trigger: AGAACTTACTATCTGGGACAAGGAGGCCTTTTCCAG...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAAAGGGAGTTCCAGGGTaGTTGGCCATCTTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGKGVPG*LAIFCQ
Trigger: TTGGCAGAAGATGGCCAACAACCCTGGAACTCCCTT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCACCAATCAAGAAGGCCTaGATTGGATGGAAATATATG +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAPIKKA*IGWKYM
Trigger: CATATATTTCCATCCAATCAAGGCCTTCTTGATTGG...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTCTTTGCACAATTTGCTaGTTGACAGGACAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSLCTIC*LTGQVV
Trigger: TACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAG...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTTAGCAAATGGAGGCTaGTGCCATTTCTTTTATGGC +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPLANGG*CHFFYG
Trigger: GCCATAAAAGAAATGGCACAAGCCTCCATTTGCTAA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCCACCATGCCTTCTaGAGATCATGTGGATTCCTA +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLLHHAF*RSCGFL
Trigger: TAGGAATCCACATGATCTCAAGAAGGCATGGTGGAG...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAGAATGCTGGACTACTaGACCCTTGTGAACTACTTG +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNRMLDY*TLVNYL
Trigger: CAAGTAGTTCACAAGGGTCAAGTAGTCCAGCATTCT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297875.7
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCATGTTTCCAAAGCCTTaGCTGTGGTATACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGMFPKP*LWYTVR
Trigger: CCTGACTGTATACCACAGCAAAGGCTTTGGAAACAT...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAGCCCCAGGGACAGACTaGCTTCTTATGCTTACAGTA +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGAPGTD*LLMLTV
Trigger: TACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGGC...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGCTCAAGCAACCATCTAGATTTCTGCAATTCTaGACAAAAATGTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: NPQVCCNNRTIPLLKQPSRFLQF*TKMYSP
Trigger: TGGGCTGTACATTTTTGTCAAGAATTGCAGAAATCT...AGATGGTTGCTTGAGCAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCGTGCCTGTTCTGATTTaGGTCTTACGCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGVPVLI*VLRLLF
Trigger: GAACAACAAGCGTAAGACCAAAATCAGAACAGGCAC...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp GATAGTCTGGATTTAAGTCCAGATTTAGTCACAGCCTCTATATGGCCTTGGGCATACTTTAGTGTTTCATaGAATTCTGGATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: DSLDLSPDLVTASIWPWAYFSVS*NSGLVP
Trigger: AGGCACCAATCCAGAATTCAATGAAACACTAAAGTA...TGCCCAAGGCCATATAGAGGCTGTGACTAAATCTGGACTTAAATCCAGACTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGATCCCAGGTCTCAGTTaGCTAATGGTAGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLIPGLS*LMVGKD
Trigger: GTCTTTTCCTACCATTAGCAAACTGAGACCTGGGAT...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGTGGGGCTCATCTTATaGCACTTCTGCCATCAAGAT +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRVGLIL*HFCHQD
Trigger: ATCTTGATGGCAGAAGTGCAATAAGATGAGCCCCAC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CAACTAGCAGGAATAAGCCCGAAGATGATTCTAGCTCCGTTACTACTAAAACCTTTCAGAATCACTCAGTaGTTTGGTGTAAAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: QLAGISPKMILAPLLLKPFRITQ*FGVKCD
Trigger: ATCACACTTTACACCAAACAACTGAGTGATTCTGAA...AGGTTTTAGTAGTAACGGAGCTAGAATCATCTTCGGGCTTATTCCTGCTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGCCGAGAACATTGACTaGCTTGAAACGTTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQAENID*LETFCL
Trigger: AAGGCAAAACGTTTCAAGCAAGTCAATGTTCTCGGC...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGCCGAGAACATTGACTaGCTTGAAACGTTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRAENID*LETFCL
Trigger: AAGGCAAAACGTTTCAAGCAAGTCAATGTTCTCGGC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTCAGTGCCGAGAACATaGACTTGCTTGAAACGTTTT +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLSVPRT*TCLKRF
Trigger: AAAACGTTTCAAGCAAGTCAATGTTCTCGGCACTGA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGGTGCCTGTTCTGATTTaGGTCTTACGCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRVPVLI*VLRLLF
Trigger: GAACAACAAGCGTAAGACCAAAATCAGAACAGGCAC...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGACAGCTCTCCTTTGTATaGAAGGCCAATATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGQLSFV*KANIRS
Trigger: GCTCCTGATATTGGCCTTCAATACAAAGGAGAGCTG...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAACTCCAGAACATACCTaGGTCGGGTATGTTCATGCT +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGTPEHT*VGYVHA
Trigger: AGCATGAACATACCCGACCAAGGTATGTTCTGGAGT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGACCCTTGTGAACTACTaGGAGCAGGAACTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRTLVNY*EQELEK
Trigger: TTTTTCAAGTTCCTGCTCCAAGTAGTTCACAAGGGT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297875.7
CDS-3UTR CAA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGTTGCCGATCTGAACTaGCTAAGAAGAAATCCCTTT +
Preference number: 5 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQVADLN*LRRNPF
Trigger: AAAGGGATTTCTTCTTAGCAAGTTCAGATCGGCAAC...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAACCAGAGTTTTGTGCTaGGTGGCTTTGCTATCATCA +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGTRVLC*VALLSS
Trigger: TGATGATAGCAAAGCCACCAAGCACAAAACTCTGGT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATTTCAGAATCACTCAGTaGTTTGGTGTAAAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNFRITQ*FGVKCD
Trigger: ATCACACTTTACACCAAACAACTGAGTGATTCTGAA...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTCCCACTTCTACGTTTaGCTTCTAAGAGTTCATTTT +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLSHFYV*LLRVHF
Trigger: AAAATGAACTCTTAGAAGCAAAACGTAGAAGTGGGA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTCCCACTTCTACGTTTaGCTTCTAAGAGTTCATTTT +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGSHFYV*LLRVHF
Trigger: AAAATGAACTCTTAGAAGCAAAACGTAGAAGTGGGA...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp CCCTGTCAATCCATCTTGAAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAGAACATTGACTTGCTaGAAACGTTTTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PCQSILKYYLVNPQVCCNRTLTC*KRFAFS
Trigger: AGAAAAGGCAAAACGTTTCAAGCAAGTCAATGTTCT...ATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGAGAACATTGACTTGCTaGAAACGTTTTGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLRTLTC*KRFAFS
Trigger: AGAAAAGGCAAAACGTTTCAAGCAAGTCAATGTTCT...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTACTTTAGTGTTTCATaGAATTCTGGATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGYFSVS*NSGLVP
Trigger: AGGCACCAATCCAGAATTCAATGAAACACTAAAGTA...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGTTTATTACCAGAGTTTaGTGCTTGGTGGCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRFITRV*CLVALL
Trigger: TAGCAAAGCCACCAAGCACAAAACTCTGGTAATAAA...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TGCACAATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAACCAATCAAGAAGGCCTaGATTGGATGGAAATATATG +
Preference number: 5 (lower is better)
Translates to: CTICLLTGQVVHFLSSNQPIKKA*IGWKYM
Trigger: CATATATTTCCATCCAATCAAGGCCTTCTTGATTGG...TTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGATGCACAATTTGCTTGTaGACAGGACAAGTAGTACAC +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGCTICL*TGQVVH
Trigger: GTGTACTACTTGTCCTGTCAACAAGCAAATTGTGCA...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTTTGCACAATTTGCTaGTTGACAGGACAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRLCTIC*LTGQVV
Trigger: TACTACTTGTCCTGTCAACAAGCAAATTGTGCAAAG...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGAAAGCCTTTGCACAATTaGCTTGTTGACAGGACAAGT +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGKPLHN*LVDRTS
Trigger: ACTTGTCCTGTCAACAAGCAAATTGTGCAAAGGCTT...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCCCCTGTCAATCCATCTaGAAATACTACTTGGTTAAT +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGPCQSI*KYYLVN
Trigger: ATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AAATACTACTTGGTTAATCCACAAGTTTGCTGCAATAACAGGACAATCCCCTTGTTTCTTTTAAGTACCTaGCTAAGCGACACTAGACTA +
Preference number: 5 (lower is better)
Translates to: KYYLVNPQVCCNNRTIPLFLLST*LSDTRL
Trigger: TAGTCTAGTGTCGCTTAGCAAGGTACTTAAAAGAAA...CAAGGGGATTGTCCTGTTATTGCAGCAAACTTGTGGATTAACCAAGTAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp ATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGCTTTCTTTTAAGTACCTaGCTAAGCGACACTAGACTA +
Preference number: 5 (lower is better)
Translates to: ICLLTGQVVHFLSSNQEGFLLST*LSDTRL
Trigger: TAGTCTAGTGTCGCTTAGCAAGGTACTTAAAAGAAA...GCCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp AATTTGCTTGTTGACAGGACAAGTAGTACACTTTCTATCATCCAATCAAGAAGGAGATTTCTGCAATTCTaGACAAAAATGTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: NLLVDRTSSTLSIIQSRRRFLQF*TKMYSP
Trigger: TGGGCTGTACATTTTTGTCAAGAATTGCAGAAATCT...CCTTCTTGATTGGATGATAGAAAGTGTACTACTTGTCCTGTCAACAAGCAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS-3UTR CAA 90 bp TTTCTTGACATAAGCCCTTTTATCTACCTAATAAGCATAGCATTATGCCAAGGACCCTGTCAATCCATCTaGAAATACTACTTGGTTAAT +
Preference number: 5 (lower is better)
Translates to: FLDISPFIYLISIALCQGPCQSI*KYYLVN
Trigger: ATTAACCAAGTAGTATTTCAAGATGGATTGACAGGG...TCCTTGGCATAATGCTATGCTTATTAGGTAGATAAAAGGGCTTATGTCAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 72 bp GGGGCCTGCAACTCGACACTCCCTGCATACCCTCAGTaGGCAAGCCTGACAAGGGTCTCCCCGGTCAAAGAT +
Preference number: 6 (lower is better)
Translates to: GACNSTLPAYPQ*ASLTRVSPVKD
Trigger: ATCTTTGACCGGGGAGACCCTTGTCAGGCTTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 72 bp GAGGTCACAGTTCGTGTGCTTGGGGCTGGTGAACTCTaGGTGCCTGGGGTCACACCATTGCTCCGACTGCTC +
Preference number: 6 (lower is better)
Translates to: EVTVRVLGAGEL*VPGVTPLLRLL
Trigger: GAGCAGTCGGAGCAATGGTGTGACCCCAGGCACTCAGAGTTCACCAGCCCCAAGCACACGAACTGTGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS GCA 72 bp TCCAGCTGCCATTGGGGCCTGCAACTCGACACTCCCTaGATACCCTCAGTGAGCAAGCCTGACAAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: SSCHWGLQLDTP*IPSVSKPDKGL
Trigger: GAGACCCTTGTCAGGCTTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS GCA 72 bp TCACAGTTCGTGTGCTTGGGGCTGGTGAACTCTGAGTaGCTGGGGTCACACCATTGCTCCGACTGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: SQFVCLGLVNSE*LGSHHCSDCSS
Trigger: CGAAGAGCAGTCGGAGCAATGGTGTGACCCCAGGCACTCAGAGTTCACCAGCCCCAAGCACACGAACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CCA 72 bp CTCCGACTGCTCTTCGGGGTCCTAGGACCAGGTTCCTaGTCATTGAGATCTGATGAGCCAGTGCTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: LRLLFGVLGPGS*SLRSDEPVLPL
Trigger: CAGGGGAAGCACTGGCTCATCAGATCTCAATGACCAGGAACCTGGTCCTAGGACCCCGAAGAGCAGTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS GCA 72 bp GCTGCGCGATTTTGTCACAGACAGTGCACTTCCAGCTaGCATTGGGGCCTGCAACTCGACACTCCCTGCATA +
Preference number: 6 (lower is better)
Translates to: AARFCHRQCTSS*HWGLQLDTPCI
Trigger: TATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAATCGCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp GCGATTTTGTCACAGACAGTGCACTTCCAGCTGCCATaGGGGCCTGCAACTCGACACTCCCTGCATACCCTC +
Preference number: 6 (lower is better)
Translates to: AILSQTVHFQLP*GPATRHSLHTL
Trigger: GAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp AGCATGAGTACACCCTCAAAGGGAGTTCCAGGGTTGTaGGCCATCTTCTGCCAAAGGCGCTGCTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: SMSTPSKGVPGL*AIFCQRRCSSP
Trigger: GGGGGAAGAGCAGCGCCTTTGGCAGAAGATGGCCAACAACCCTGGAACTCCCTTTGAGGGTGTACTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp CTTAGCTGCGCGATTTTGTCACAGACAGTGCACTTCCAGCTGCCATaGGGGCCTGCAACTCGACACTCCCTGCATACCCTCAGTGAGCAA +
Preference number: 6 (lower is better)
Translates to: LSCAILSQTVHFQLP*GPATRHSLHTLSEQ
Trigger: TTGCTCACTGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAATCGCGCAGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CCA 72 bp CGATTTTGTCACAGACAGTGCACTTCCAGCTGCCATTaGGGCCTGCAACTCGACACTCCCTGCATACCCTCA +
Preference number: 6 (lower is better)
Translates to: RFCHRQCTSSCH*GLQLDTPCIPS
Trigger: TGAGGGTATGCAGGGAGTGTCGAGTTGCAGGCCCCAATGGCAGCTGGAAGTGCACTGTCTGTGACAAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp CTGCTCTTCGGGGTCCTAGGACCAGGTTCCTGGTCATaGAGATCTGATGAGCCAGTGCTTCCCCTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: LLFGVLGPGSWS*RSDEPVLPLSE
Trigger: TTCAGACAGGGGAAGCACTGGCTCATCAGATCTCAATGACCAGGAACCTGGTCCTAGGACCCCGAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 72 bp TTAAGGCTGGTAGTTGATAGGCCACTTGCCAGACGGTaGGTGTTTGTAGATAACTGCGAGGACACTAAGGCA +
Preference number: 6 (lower is better)
Translates to: LRLVVDRPLARR*VFVDNCEDTKA
Trigger: TGCCTTAGTGTCCTCGCAGTTATCTACAAACACTCACCGTCTGGCAAGTGGCCTATCAACTACCAGCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297875.7
CDS TCA 72 bp TTTAGAGCCTACATTTTCCCATGCTGGAACGAAGCATaGGTACACCCTCAAAGGGAGTTCCAGGGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: FRAYIFPCWNEA*VHPQREFQGCW
Trigger: CCAACAACCCTGGAACTCCCTTTGAGGGTGTACTCATGCTTCGTTCCAGCATGGGAAAATGTAGGCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS GCA 72 bp CCAAGGAGTCCTTGTCTAAAGCCCCAGGGACAGACTTaGTTCTTATGCTTACAGTATCCTCTGAGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PRSPCLKPQGQT*FLCLQYPLSLL
Trigger: CAGAAGACTCAGAGGATACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGGCTTTAGACAAGGACTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 72 bp GAAGCTATTACGTCCAAATCGATCATAGTGCCAGACTaGGAGCTGCAGAGTTCTTGTTTCCAGCTGGGTATG +
Preference number: 6 (lower is better)
Translates to: EAITSKSIIVPD*ELQSSCFQLGM
Trigger: CATACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCACTATGATCGATTTGGACGTAATAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp TCCAAGGAGTCCTTGTCTAAAGCCCCAGGGACAGACTaGCTTCTTATGCTTACAGTATCCTCTGAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: SKESLSKAPGTD*LLMLTVSSESS
Trigger: AGAAGACTCAGAGGATACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGGCTTTAGACAAGGACTCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp TCAGTCTCTTCCAAGGAGTCCTTGTCTAAAGCCCCAGGGACAGACTaGCTTCTTATGCTTACAGTATCCTCTGAGTCTTCTGTAAATGAC +
Preference number: 6 (lower is better)
Translates to: SVSSKESLSKAPGTD*LLMLTVSSESSVND
Trigger: GTCATTTACAGAAGACTCAGAGGATACTGTAAGCATAAGAAGCAAGTCTGTCCCTGGGGCTTTAGACAAGGACTCCTTGGAAGAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS TCA 72 bp CAGGTAGCCCTTCACAAAGCTATCAGAAGTGCCTCCTaGCTTCACTGCTGTCAAATTCTTTGCCTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: QVALHKAIRSAS*LHCCQILCLFD
Trigger: ATCAAAGAGGCAAAGAATTTGACAGCAGTGAAGTCAGGAGGCACTTCTGATAGCTTTGTGAAGGGCTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CCA 72 bp TGCCAGACTGAGAGCTGCAGAGTTCTTGTTTCCAGCTaGGTATGGCTGATAGTGTACTTTAGTGTTTCATTG +
Preference number: 6 (lower is better)
Translates to: CQTESCRVLVSS*VWLIVYFSVSL
Trigger: CAATGAAACACTAAAGTACACTATCAGCCATACCCAGCTGGAAACAAGAACTCTGCAGCTCTCAGTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp GGATTGGTGCCTGTTCTGATTTTGGTCTTACGCTTGTaGTTCCGGGACTTGTCAGGAAGAAGATATGACTTG +
Preference number: 6 (lower is better)
Translates to: GLVPVLILVLRL*FRDLSGRRYDL
Trigger: CAAGTCATATCTTCTTCCTGACAAGTCCCGGAACAACAAGCGTAAGACCAAAATCAGAACAGGCACCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp TCTGGATTGGTGCCTGTTCTGATTTTGGTCTTACGCTaGTTGTTCCGGGACTTGTCAGGAAGAAGATATGAC +
Preference number: 6 (lower is better)
Translates to: SGLVPVLILVLR*LFRDLSGRRYD
Trigger: GTCATATCTTCTTCCTGACAAGTCCCGGAACAACAAGCGTAAGACCAAAATCAGAACAGGCACCAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp CAGGAGCAAACTCCACCTTGGGTTGAAGCACAAACCACTCATCAGTaGGATTTTCAAAGTTCCATGAGTCAAAAGGAATCTCTACTTCCC +
Preference number: 6 (lower is better)
Translates to: QEQTPPWVEAQTTHQ*DFQSSMSQKESLLP
Trigger: GGGAAGTAGAGATTCCTTTTGACTCATGGAACTTTGAAAATCCAACTGATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGTTTGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp TCAGAAGTGCCTCCTGACTTCACTGCTGTCAAATTCTTTGCCTCTTaGATGAACACTTCTAGTATTCCTCCAGAGATTACAGGTGACTCC +
Preference number: 6 (lower is better)
Translates to: SEVPPDFTAVKFFAS*MNTSSIPPEITGDS
Trigger: GGAGTCACCTGTAATCTCTGGAGGAATACTAGAAGTGTTCATCAAAGAGGCAAAGAATTTGACAGCAGTGAAGTCAGGAGGCACTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp TGGGTATGGCTGATAGTGTACTTTAGTGTTTCATTGAATTCTGGATaGGTGCCTGTTCTGATTTTGGTCTTACGCTTGTTGTTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: WVWLIVYFSVSLNSG*VPVLILVLRLLFRD
Trigger: GTCCCGGAACAACAAGCGTAAGACCAAAATCAGAACAGGCACCAATCCAGAATTCAATGAAACACTAAAGTACACTATCAGCCATACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp TCTCTCAAACACACAAACTGTAGAATGCTGGACTACTaGACCCTTGTGAACTACTTGGAGCAGGAACTTGAA +
Preference number: 6 (lower is better)
Translates to: SLKHTNCRMLDY*TLVNYLEQELE
Trigger: TTCAAGTTCCTGCTCCAAGTAGTTCACAAGGGTCAAGTAGTCCAGCATTCTACAGTTTGTGTGTTTGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297875.7
CDS GCA 72 bp AGTGTCAGTTTTGGGAGTTATGATTTCTCCTCTGGTTaGCGATCTGAACTTGCTAAGAAGAAATCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SVSFGSYDFSSG*RSELAKKKSLS
Trigger: AGAAAGGGATTTCTTCTTAGCAAGTTCAGATCGGCAACCAGAGGAGAAATCATAACTCCCAAAACTGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp ACTCCACCTTGGGTTGAAGCACAAACCACTCATCAGTaGGATTTTCAAAGTTCCATGAGTCAAAAGGAATCT +
Preference number: 6 (lower is better)
Translates to: TPPWVEAQTTHQ*DFQSSMSQKES
Trigger: AGATTCCTTTTGACTCATGGAACTTTGAAAATCCAACTGATGAGTGGTTTGTGCTTCAACCCAAGGTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp CCTCCTGACTTCACTGCTGTCAAATTCTTTGCCTCTTaGATGAACACTTCTAGTATTCCTCCAGAGATTACA +
Preference number: 6 (lower is better)
Translates to: PPDFTAVKFFAS*MNTSSIPPEIT
Trigger: TGTAATCTCTGGAGGAATACTAGAAGTGTTCATCAAAGAGGCAAAGAATTTGACAGCAGTGAAGTCAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp CACAAACTCTGCTGGCCTCTTGTTGAGTTTTCCCACTTCTACGTTTaGCTTCTAAGAGTTCATTTTTCAGCTTCCTTATTCTCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: HKLCWPLVEFSHFYV*LLRVHFSASLFSCP
Trigger: AGGACAAGAGAATAAGGAAGCTGAAAAATGAACTCTTAGAAGCAAAACGTAGAAGTGGGAAAACTCAACAAGAGGCCAGCAGAGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp TGCTGGCCTCTTGTTGAGTTTTCCCACTTCTACGTTTaGCTTCTAAGAGTTCATTTTTCAGCTTCCTTATTC +
Preference number: 6 (lower is better)
Translates to: CWPLVEFSHFYV*LLRVHFSASLF
Trigger: GAATAAGGAAGCTGAAAAATGAACTCTTAGAAGCAAAACGTAGAAGTGGGAAAACTCAACAAGAGGCCAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp CTGATAGTGTACTTTAGTGTTTCATTGAATTCTGGATaGGTGCCTGTTCTGATTTTGGTCTTACGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: LIVYFSVSLNSG*VPVLILVLRLL
Trigger: CAACAAGCGTAAGACCAAAATCAGAACAGGCACCAATCCAGAATTCAATGAAACACTAAAGTACACTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 90 bp CAGTTGTTTGGTGTAAAGTGTGATTTTTACAAGGTCTCTGCAGAATaGCGTATGGTAGTTAAGTATTCTTTCAGGCTATACGTAGAACAG +
Preference number: 6 (lower is better)
Translates to: QLFGVKCDFYKVSAE*RMVVKYSFRLYVEQ
Trigger: CTGTTCTACGTATAGCCTGAAAGAATACTTAACTACCATACGCAATTCTGCAGAGACCTTGTAAAAATCACACTTTACACCAAACAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2
CDS CAA 72 bp GGTGTAAAGTGTGATTTTTACAAGGTCTCTGCAGAATaGCGTATGGTAGTTAAGTATTCTTTCAGGCTATAC +
Preference number: 6 (lower is better)
Translates to: GVKCDFYKVSAE*RMVVKYSFRLY
Trigger: GTATAGCCTGAAAGAATACTTAACTACCATACGCAATTCTGCAGAGACCTTGTAAAAATCACACTTTACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297875.7
ENST00000456733.2