RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYTL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000102362

Ensembl transcript IDs: ENST00000263033.9, ENST00000276141.10, ENST00000372981.1, ENST00000372989.5, ENST00000491326.1, ENST00000491602.1

Found 536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGATaGCGGGGTCTGGTCTCTGGTCTCAGAGCATCAGTCAGGTTCCAG +
Preference number: 1 (lower is better)
Translates to: LPQKQISSVQECPDR*RGLVSGLRASVRFQ
Trigger: CTGGAACCTGACTGATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTaGCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGAGCATCA +
Preference number: 1 (lower is better)
Translates to: YTSLLPQKQISSVQE*PDRCRGLVSGLRAS
Trigger: TGATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 90 bp TCATGCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTaGGGAAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: SCCRSYSEDKAPTNI*GRHTPPPALLTSSL
Trigger: GAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp ACAGAACCAGGATTCCAACACAGGTCTGCACTCAGATCCCAGGCATaGTTATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCA +
Preference number: 1 (lower is better)
Translates to: TEPGFQHRSALRSQA*LCHTATLWPEVPSP
Trigger: TGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGTGTTGGAATCCTGGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp TGTGAACAGATACCCAATGTATCCTCAGACACAGACATGGCCCACTaGAGCCCGTGTCACCTGGTCATGTTGCAGAGGAATAGCTACAGC +
Preference number: 1 (lower is better)
Translates to: CEQIPNVSSDTDMAH*SPCHLVMLQRNSYS
Trigger: GCTGTAGCTATTCCTCTGCAACATGACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGGATACATTGGGTATCTGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp GATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCCCGAGGTaGCATCTCCAAAGTAATATTTCCCTGGCCTCTGTAACCAAGAGC +
Preference number: 1 (lower is better)
Translates to: DPRHDYAILLHCGPR*HLQSNISLASVTKS
Trigger: GCTCTTGGTTACAGAGGCCAGGGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp CCAACACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTaGTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCC +
Preference number: 1 (lower is better)
Translates to: PTQVCTQIPGMIMPY*YTVARGAISKVIFP
Trigger: GGGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp TTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAACACTGGGCCAATTaGGATAACACTTGGCTCTTCTGGTTGACACAGTGGGATGTAGAC +
Preference number: 1 (lower is better)
Translates to: LEPLTVPSLEKHWAN*DNTWLFWLTQWDVD
Trigger: GTCTACATCCCACTGTGTCAACCAGAAGAGCCAAGTGTTATCTCAATTGGCCCAGTGTTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR GCA 90 bp TCCAGGAATCCATCTGGATCTCTGCCTCTCCAAGGAAAGTGTTTCTaGCAAAACGACCATGATGCCAAACTGAGAACTGCAGGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: SRNPSGSLPLQGKCF*QNDHDAKLRTAGSS
Trigger: AGAGGACCCTGCAGTTCTCAGTTTGGCATCATGGTCGTTTTGGCAGAAACACTTTCCTTGGAGAGGCAGAGATCCAGATGGATTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 90 bp GATCAGGATGTGAACAGATACCCAATGTATCCTCAGACACAGACATaGCCCACTGAAGCCCGTGTCACCTGGTCATGTTGCAGAGGAATA +
Preference number: 1 (lower is better)
Translates to: DQDVNRYPMYPQTQT*PTEARVTWSCCRGI
Trigger: TATTCCTCTGCAACATGACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGGATACATTGGGTATCTGTTCACATCCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp GGAAAGGCAGATCACCTTTGTTCTCTTCACTGGGAGATCAGGATGTaGACAGATACCCAATGTATCCTCAGACACAGACATGGCCCACTG +
Preference number: 1 (lower is better)
Translates to: GKADHLCSLHWEIRM*TDTQCILRHRHGPL
Trigger: CAGTGGGCCATGTCTGTGTCTGAGGATACATTGGGTATCTGTTCACATCCTGATCTCCCAGTGAAGAGAACAAAGGTGATCTGCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp AGATGTTCCCGAAATCACCAGCTTCACTGTAGATGCTCATCATGCTaGCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGA +
Preference number: 1 (lower is better)
Translates to: RCSRNHQLHCRCSSC*RSYSEDKAPTNIWG
Trigger: TCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp TGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTCACTGTAGATaGTCATCATGCTGCCGATCGTACTCTGAAGATAAAGCACCCACG +
Preference number: 1 (lower is better)
Translates to: CQSQRCSRNHQLHCR*SSCCRSYSEDKAPT
Trigger: CGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGAACATCTTTGTGACTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp CCAGACTCTGGGTTTGCTGCTCATACTTCAGGGAAAAGGCAATCCTaGCAGTCACAAAGATGTTCCCGAAATCACCAGCTTCACTGTAGA +
Preference number: 1 (lower is better)
Translates to: PDSGFAAHTSGKRQS*QSQRCSRNHQLHCR
Trigger: TCTACAGTGAAGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp CAAAGATGTTCCCGAAATCACCAGCTTCACTGTAGATGCTCATCATaGTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGG +
Preference number: 1 (lower is better)
Translates to: QRCSRNHQLHCRCSS*CRSYSEDKAPTNIW
Trigger: CCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGAACATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp CCTGGCCTCTGTAACCAAGAGCATAGCAATTGGAGCTCCATGAATTaGTTTACTTCCCACTTGGAAGTAAAGCAGTGGCTTGGCAAAAGG +
Preference number: 1 (lower is better)
Translates to: PGLCNQEHSNWSSMN*FTSHLEVKQWLGKR
Trigger: CCTTTTGCCAAGCCACTGCTTTACTTCCAAGTGGGAAGTAAAGCAATTCATGGAGCTCCAATTGCTATGCTCTTGGTTACAGAGGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp AGTGAAAAGGCACCTTCCTTTCTGGTAGTAATCGGTCATGCGAGCTaGCATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACC +
Preference number: 1 (lower is better)
Translates to: SEKAPSFLVVIGHAS*HSLPVCECEQILFT
Trigger: GGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCGCATGACCGATTACTACCAGAAAGGAAGGTGCCTTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp TTTGCCTGGTTTACACAGAACTCACACTTGATAGACAAATGCCTCTaGAATTGCTGTCAAACTCAGAAACACCAGCAGGGGGCACTAGAA +
Preference number: 1 (lower is better)
Translates to: FAWFTQNSHLIDKCL*NCCQTQKHQQGALE
Trigger: TTCTAGTGCCCCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAGTGTGAGTTCTGTGTAAACCAGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp AAGCCTGCTTTTCACTTTCCTCCTCTCCATATAGATATGCCATGGTaGCATGTGATGTCAAAAATGTCACCTCAAGCCCTCTTAGACATG +
Preference number: 1 (lower is better)
Translates to: KPAFHFPPLHIDMPW*HVMSKMSPQALLDM
Trigger: CATGTCTAAGAGGGCTTGAGGTGACATTTTTGACATCACATGTCACCATGGCATATCTATATGGAGAGGAGGAAAGTGAAAAGCAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 90 bp CAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGCTTCCAGGAATCCATCTGGATCTCT +
Preference number: 1 (lower is better)
Translates to: QELLKQTTFPCKGRQ*SSFLSSFQESIWIS
Trigger: AGAGATCCAGATGGATTCCTGGAAGCTTGATAAGAAACTGGATCATTGCCTCCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATaGCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAA +
Preference number: 1 (lower is better)
Translates to: GWETKEQVTARDPKL*LPLQLQSTPNQSLK
Trigger: TTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR TCA 90 bp ATATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATaGCTGCAGTATCAGTTTAAAATGCAGAAAATTCAGCATGGGCTG +
Preference number: 1 (lower is better)
Translates to: IYLIFHSRNEELSLQ*LQYQFKMQKIQHGL
Trigger: CAGCCCATGCTGAATTTTCTGCATTTTAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR TCA 90 bp AGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTaGAAACATTCCTCCATTCGGTTCATACATACAGTAGAAACCACT +
Preference number: 1 (lower is better)
Translates to: SYAFHYNCNPHQINL*KHSSIRFIHTVETT
Trigger: AGTGGTTTCTACTGTATGTATGAACCGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGAATAAGCCAGTGCTGCTaGCATTCCTTGACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRISQCC*HSLTQR
Trigger: CCTCTGGGTCAAGGAATGTCAGCAGCACTGGCTTAT...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp ACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGACCGGGGTCTGGTCTCTaGTCTCAGAGCATCAGTCAG +
Preference number: 2 (lower is better)
Translates to: TSLLPQKQISSVQECPDRPGSGL*SQSISQ
Trigger: CTGACTGATGCTCTGAGACCAGAGACCAGACCCCGG...TCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACCCCAGGTCCCGAATCTaGTCTAGGGAGGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: YTSLLPQKQISSVQECPDPRSRI*SREVLL
Trigger: AAGAAGCACCTCCCTAGAGCAGATTCGGGACCTGGG...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATGCCCTCGCCAGGGCTaGACCTGCAGAAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKCPRQG*TCRRGQ
Trigger: CTGTCCTCTTCTGCAGGTCCAGCCCTGGCGAGGGCA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGAACCAGACTCTGGGTTTaGTGCTCATACTTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRTRLWV*CSYFRE
Trigger: TTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGT...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCCCTCAGACACAGACATaGCCCACTGAAGCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGPQTQT*PTEARV
Trigger: GACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGG...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAACAGACATGGCCCACTaGAGCCCGTGTCACCTGGTC +
Preference number: 2 (lower is better)
Translates to: VLWARRDSGISYCEGKVKTDMAH*SPCHLV
Trigger: GACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTCACTTCCTCTGACCTaGCCTCGCCAGGGCTGGACC +
Preference number: 2 (lower is better)
Translates to: IRFIHTVETTVAALNPVCSLPLT*PRQGWT
Trigger: GGTCCAGCCCTGGCGAGGGCAGGTCAGAGGAAGTGA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATTCACTTCCTCTGACCTaGCCTCGCCAGGGCTGGACC +
Preference number: 2 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNSLPLT*PRQGWT
Trigger: GGTCCAGCCCTGGCGAGGGCAGGTCAGAGGAAGTGA...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTGCCCTCGCCAGGGCTaGACCTGCAGAAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: IRFIHTVETTVAALNPVCCPRQG*TCRRGQ
Trigger: CTGTCCTCTTCTGCAGGTCCAGCCCTGGCGAGGGCA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp GGCCAGCTGATGGCACTCCTTCACATGGACAACCAGACTCTGGGTTaGCTGCTCATACTTCAGGGAAAAGGCAATCCTGCCAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: GQLMALLHMDNQTLG*LLILQGKGNPASHK
Trigger: TTTGTGACTGGCAGGATTGCCTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCATCAGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAGTCACTCTGGTCCTCTaGGATCAGCTAGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKVTLVL*DQLEAL
Trigger: GAGAGCTTCTAGCTGATCTCAGAGGACCAGAGTGAC...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp ACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGATTGTTAACCATACCCTaGTGTCGATCAACCCTGCCA +
Preference number: 2 (lower is better)
Translates to: TSLLPQKQISSVQECPDRLLTIP*CRSTLP
Trigger: TGGCAGGGTTGATCGACATCAGGGTATGGTTAACAA...TCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAATTCAGCATGGGCTGTaGGACACTTTACCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKIQHGL*DTLPSV
Trigger: GACTGAGGGTAAAGTGTCTCACAGCCCATGCTGAAT...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR GCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACAGGTAGTAATCGGTCATaGGAGCTGACATTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTGSNRS*ELTFSS
Trigger: GGAAGAGAATGTCAGCTCGCATGACCGATTACTACC...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTTTCTTCACTTCCTCTaGCCTGCCCTCGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: NQLAADSVERDFLSAIHSFLHFL*PALARA
Trigger: AGCCCTGGCGAGGGCAGGTCAGAGGAAGTGAAGAAA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAATTCTGGTTGACACAGTaGGATGTAGACCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKFWLTQ*DVDHAL
Trigger: CAGAGCATGGTCTACATCCCACTGTGTCAACCAGAA...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACACAGAGAAAAGAGATTTaGCCAGAACTGGGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTQRKEI*PELGVS
Trigger: ACTCACTCCCAGTTCTGGCCAAATCTCTTTTCTCTG...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGGATGTCGATCAACCCTaGCAGAGCCCCTCTCATGAC +
Preference number: 2 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGDVDQP*QSPSHD
Trigger: GTCATGAGAGGGGCTCTGGCAGGGTTGATCGACATC...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAACACTTGGCTCTTCTaGTTGACACAGTGGGATGTA +
Preference number: 2 (lower is better)
Translates to: GWETKEQVTARDPKLCLPNTWLF*LTQWDV
Trigger: TACATCCCACTGTGTCAACCAGAAGAGCCAAGTGTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGACAGATGCCGGGGTCTaGTCTCTGGTCTCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGTDAGV*SLVSEH
Trigger: ATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGT...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATTTCTTCACTTCCTCTaGCCTGCCCTCGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SFIREMRSSLSNDCSISLFLHFL*PALARA
Trigger: AGCCCTGGCGAGGGCAGGTCAGAGGAAGTGAAGAAA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATATTCAGCATGGGCTGTaGGACACTTTACCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNIQHGL*DTLPSV
Trigger: GACTGAGGGTAAAGTGTCTCACAGCCCATGCTGAAT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCATCGGTCATGCGAGCTaGCATTCTCTTCCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCIGHAS*HSLPVC
Trigger: ACACACAGGAAGAGAATGTCAGCTCGCATGACCGAT...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACATCAAAATTGTTCAGGTaGATGAATCAGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTSKLFR*MNQLMA
Trigger: AGCCATGAGCTGATTCATTCACCTGAACAATTTTGA...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCTGGCACTCCTTCACATaGACAACCAGACTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCWHSFT*TTRLWV
Trigger: AACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCA...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 90 bp CTTACCCTCAGCGTCTCATCATATAGTGGATTAATAGTGTCCCGCTaGATGCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LTLSVSSYSGLIVSR*MLVFLFPWRDLSGR
Trigger: TCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGCATCAAGCGGGACACTATTAATCCACTATATGATGAGACGCTGAGGGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACACTGGGCATCCTCGTaGTTTAGTCAAAATACATTA +
Preference number: 2 (lower is better)
Translates to: GWETKEQVTARDPKLCLPHWASS*FSQNTL
Trigger: TAATGTATTTTGACTAAATCACGAGGATGCCCAGTG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAACACTGGGCATCCTCGTaGTTTAGTCAAAATACATTA +
Preference number: 2 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKHWASS*FSQNTL
Trigger: TAATGTATTTTGACTAAATCACGAGGATGCCCAGTG...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAAAGTTCTCCTACCCTTaGGGTCTAGATACTTACCCT +
Preference number: 2 (lower is better)
Translates to: VLWARRDSGISYCEGKVKKFSYP*GLDTYP
Trigger: AGGGTAAGTATCTAGACCTCAAGGGTAGGAGAACTT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAAAGAAGAACAAGTCTaGATCACTCTAGCCAGCATA +
Preference number: 2 (lower is better)
Translates to: GWETKEQVTARDPKLCLPKEEQV*ITLASI
Trigger: TATGCTGGCTAGAGTGATGCAGACTTGTTCTTCTTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTCTGGTTGACACAGTaGGATGTAGACCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSFWLTQ*DVDHAL
Trigger: CAGAGCATGGTCTACATCCCACTGTGTCAACCAGAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATTCCACACACAACTTTaGGTAGAAACGCTTATGAGA +
Preference number: 2 (lower is better)
Translates to: GWETKEQVTARDPKLCLPFHTQL*VETLMR
Trigger: TCTCATAAGCGTTTCTACCCAAAGTTGTGTGTGGAA...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp CTGGTTTACACAGAACTCACACTTGATAGACAAATGCCTCTGAAATaGCTGTCAAACTCAGAAACACCAGCAGGGGGCACTAGAACTCCA +
Preference number: 2 (lower is better)
Translates to: LVYTELTLDRQMPLK*LSNSETPAGGTRTP
Trigger: TGGAGTTCTAGTGCCCCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAGTGTGAGTTCTGTGTAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACTTTCATTCGAGAAATaGGGAGCTCTCTCTCCAATG +
Preference number: 2 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLSFEK*GALSPM
Trigger: CATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCCTTTCATTCGAGAAATaGGGAGCTCTCTCTCCAATG +
Preference number: 2 (lower is better)
Translates to: IRFIHTVETTVAALNPVCLSFEK*GALSPM
Trigger: CATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAG...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAAACACTGGGCCAATTaGGATAACACTTGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: IRFIHTVETTVAALNPVCKHWAN*DNTWLF
Trigger: GAAGAGCCAAGTGTTATCTCAATTGGCCCAGTGTTT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR GCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATCAGCTTCACTGTAGATaGTCATCATGCTGCCGATCG +
Preference number: 2 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHQLHCR*SSCCRS
Trigger: CGATCGGCAGCATGATGAGCATCTACAGTGAAGCTG...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGCAGAAAATTCAGCATaGGCTGTGAGACACTTTACC +
Preference number: 2 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNAENSA*AVRHFT
Trigger: GGTAAAGTGTCTCACAGCCCATGCTGAATTTTCTGC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACAGTTGAGAATTTGGAATaGGCTATGATGAAGAAATCT +
Preference number: 2 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTVENLE*AMMKKS
Trigger: AGATTTCTTCATCATAGCCCATTCCAAATTCTCAAC...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 90 bp AATAGCTACAGCTTAGGGCACAAGACAGAACAAGTTCTCCTACCCTaGAGGTCTAGATACTTACCCTCAGCGTCTCATCATATAGTGGAT +
Preference number: 2 (lower is better)
Translates to: NSYSLGHKTEQVLLP*RSRYLPSASHHIVD
Trigger: ATCCACTATATGATGAGACGCTGAGGGTAAGTATCTAGACCTCAAGGGTAGGAGAACTTGTTCTGTCTTGTGCCCTAAGCTGTAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGCCAGAGCCCCTCTCATaGCACTCACTTTCTTTTAAT +
Preference number: 2 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGPEPLS*HSLSFN
Trigger: ATTAAAAGAAAGTGAGTGTCATGAGAGGGGCTCTGG...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGCAATCTTCATGCTTATaGCAGAACCAGGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGQSSCL*QNQALI
Trigger: AATCAGGGCCTGGTTCTGTCATAAGCATGAAGATTG...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGTGCCATGGTGACATGTaGTGTCAAAAATGTCACCTC +
Preference number: 2 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKCHGDM*CQKCHL
Trigger: GAGGTGACATTTTTGACATCACATGTCACCATGGCA...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGAACCAAAGACAGCACTaGGTAATTTGCTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGNQRQH*VICWPF
Trigger: GAAAGGCCAGCAAATTACTCAGTGCTGTCTTTGGTT...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTAGTTTCAGAAGCCCCTaGAATAAGCCAGTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFSFRSP*NKPVLL
Trigger: CAGCAGCACTGGCTTATTGCAGGGGCTTCTGAAACT...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGAGACTCTGGGTTTGCTaGTCATACTTCAGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGRLWVC*SYFREK
Trigger: CTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCT...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATACCAGCAGAGGCTACTaGAGACAATTCTACCTCAGA +
Preference number: 2 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHTSRGY*RQFYLR
Trigger: TCTGAGGTAGAATTGTCTGCAGTAGCCTCTGCTGGT...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAACACTAAGACAGATGTaGTACATGAGGATGAATATA +
Preference number: 2 (lower is better)
Translates to: GWETKEQVTARDPKLCLPTLRQM*YMRMNI
Trigger: TATATTCATCCTCATGTACCACATCTGTCTTAGTGT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAGCAGTTAAGTCCATCTaGGGAATGTGTTATATACAC +
Preference number: 2 (lower is better)
Translates to: VLWARRDSGISYCEGKVKAVKSI*GMCYIH
Trigger: GTGTATATAACACATTCCCCAGATGGACTTAACTGC...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATTGGACAACCAGACTCTaGGTTTGCTGCTCATACTTC +
Preference number: 2 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHWTTRL*VCCSYF
Trigger: GAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCA...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 90 bp GAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATaGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: EQVTARDPKLCLPLQ*QSTPNQSLKTFLHS
Trigger: CGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp TGTGAATCTCAAACTTCACATCAATCCAGGAAAGGCAGATCACCTTaGTTCTCTTCACTGGGAGATCAGGATGTGAACAGATACCCAATG +
Preference number: 2 (lower is better)
Translates to: CESQTSHQSRKGRSP*FSSLGDQDVNRYPM
Trigger: CATTGGGTATCTGTTCACATCCTGATCTCCCAGTGAAGAGAACAAAGGTGATCTGCCTTTCCTGGATTGATGTGAAGTTTGAGATTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp GCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGAAGGTAAGTCTTCACTATGATGAAGAAATCTaGTCTTGCTCACTTCATAGC +
Preference number: 2 (lower is better)
Translates to: AGFSFSLAGLVRQKVSLHYDEEI*SCSLHS
Trigger: GCTATGAAGTGAGCAAGATCAGATTTCTTCATCATA...GTGAAGACTTACCTTCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTGGGAAAAGGCAATCCTaGCAGTCACAAAGATGTTCC +
Preference number: 2 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFGKRQS*QSQRCS
Trigger: GGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCC...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTTCCACACACAACTTTaGGTAGAAACGCTTATGAGA +
Preference number: 2 (lower is better)
Translates to: IRFIHTVETTVAALNPVCFHTQL*VETLMR
Trigger: TCTCATAAGCGTTTCTACCCAAAGTTGTGTGTGGAA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAATAGAAAGGTCAGTTTaGTCAATGAGTACCAGAAGA +
Preference number: 2 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSIERSV*SMSTRR
Trigger: TCTTCTGGTACTCATTGATCAAACTGACCTTTCTAT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGAGATTTGTGGCCATGTaGATCTCAAACTTCACATCA +
Preference number: 2 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGRFVAM*ISNFTS
Trigger: TGATGTGAAGTTTGAGATTCACATGGCCACAAATCT...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR GCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAAAGAAGAACAAGTCTaGATCACTCTAGCCAGCATA +
Preference number: 2 (lower is better)
Translates to: NQLAADSVERDFLSAIHSKEEQV*ITLASI
Trigger: TATGCTGGCTAGAGTGATGCAGACTTGTTCTTCTTT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR GCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTTGTAGATGCTCATCATaGTGCCGATCGTACTCTGAA +
Preference number: 2 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFCRCSS*CRSYSE
Trigger: TTCAGAGTACGATCGGCAGCATGATGAGCATCTACA...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR TCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCATAGAAAGGTCAGTTTaGTCAATGAGTACCAGAAGA +
Preference number: 2 (lower is better)
Translates to: NQLAADSVERDFLSAIHSIERSV*SMSTRR
Trigger: TCTTCTGGTACTCATTGATCAAACTGACCTTTCTAT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp CACACAACTTTGGGTAGAAACGCTTATGAGAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAGATGAAACTTAGCTCACTAGACCCT +
Preference number: 2 (lower is better)
Translates to: HTTLGRNAYENRKVS*INEYQKMKLSSLDP
Trigger: AGGGTCTAGTGAGCTAAGTTTCATCTTCTGGTACTCATTGATCAAACTGACCTTTCTATTCTCATAAGCGTTTCTACCCAAAGTTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAAAACACTGGGCCAATTaGGATAACACTTGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: PSITIAIHTKSIFENIPPKHWAN*DNTWLF
Trigger: GAAGAGCCAAGTGTTATCTCAATTGGCCCAGTGTTT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCACACTAAGACAGATGTaGTACATGAGGATGAATATA +
Preference number: 2 (lower is better)
Translates to: NQLAADSVERDFLSAIHSTLRQM*YMRMNI
Trigger: TATATTCATCCTCATGTACCACATCTGTCTTAGTGT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR TCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAGAGCTCTCTCTCCAATaGCTGCAGTATCAGTTTAAA +
Preference number: 2 (lower is better)
Translates to: PSITIAIHTKSIFENIPPELSLQ*LQYQFK
Trigger: TTTAAACTGATACTGCAGTCATTGGAGAGAGAGCTC...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp AAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAATCTTaGAAAACATTCCTCCATTCGGTTCATACATACAGTAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: KLCLPLQLQSTPNQS*KTFLHSVHTYSRNH
Trigger: GTGGTTTCTACTGTATGTATGAACCGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 90 bp GTCACTAGTCCTGAATACCAAATTACTTTATGTTCCCTGAGCACTTaGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTATAAAA +
Preference number: 2 (lower is better)
Translates to: VTSPEYQITLCSLST*SFLTQSLNLTHFIK
Trigger: TTTTATAAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACATAAAGTAATTTGGTATTCAGGACTAGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp CTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTaGCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: LLPQKQISSVQE*PDRCRGLVSGL
Trigger: GAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 72 bp GCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTaGTCTCTGGTCTCAGAGCATCAGTCAGGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: ALFKSARTDAGV*SLVSEHQSGSR
Trigger: TCTGGAACCTGACTGATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 72 bp CGATCGTACTCTGAAGATAAAGCACCCACGAACATCTaGGGAAGGCACACTCCCCCGCCCGCATTGCTCACA +
Preference number: 3 (lower is better)
Translates to: RSYSEDKAPTNI*GRHTPPPALLT
Trigger: TGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp AAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGATaGCGGGGTCTGGTCTCTGGTCTCAGAGCATCAGTC +
Preference number: 3 (lower is better)
Translates to: KQISSVQECPDR*RGLVSGLRASV
Trigger: GACTGATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 72 bp GTGAACAGATACCCAATGTATCCTCAGACACAGACATaGCCCACTGAAGCCCGTGTCACCTGGTCATGTTGC +
Preference number: 3 (lower is better)
Translates to: VNRYPMYPQTQT*PTEARVTWSCC
Trigger: GCAACATGACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGGATACATTGGGTATCTGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 72 bp ATACCCAATGTATCCTCAGACACAGACATGGCCCACTaGAGCCCGTGTCACCTGGTCATGTTGCAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: IPNVSSDTDMAH*SPCHLVMLQRN
Trigger: ATTCCTCTGCAACATGACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGGATACATTGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp CACTCCTTCACATGGACAACCAGACTCTGGGTTTGCTaGTCATACTTCAGGGAAAAGGCAATCCTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: HSFTWTTRLWVC*SYFREKAILPV
Trigger: GACTGGCAGGATTGCCTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCATGTGAAGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp TGGCACTCCTTCACATGGACAACCAGACTCTGGGTTTaGTGCTCATACTTCAGGGAAAAGGCAATCCTGCCA +
Preference number: 3 (lower is better)
Translates to: WHSFTWTTRLWV*CSYFREKAILP
Trigger: TGGCAGGATTGCCTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp TCCCGAAATCACCAGCTTCACTGTAGATGCTCATCATaGTGCCGATCGTACTCTGAAGATAAAGCACCCACG +
Preference number: 3 (lower is better)
Translates to: SRNHQLHCRCSS*CRSYSEDKAPT
Trigger: CGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp TTGGCAAGTGACAGAACCAGGATTCCAACACAGGTCTaGACTCAGATCCCAGGCATGATTATGCCATACTGC +
Preference number: 3 (lower is better)
Translates to: LASDRTRIPTQV*TQIPGMIMPYC
Trigger: GCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGTGTTGGAATCCTGGTTCTGTCACTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp CCATCTGGATCTCTGCCTCTCCAAGGAAAGTGTTTCTaGCAAAACGACCATGATGCCAAACTGAGAACTGCA +
Preference number: 3 (lower is better)
Translates to: PSGSLPLQGKCF*QNDHDAKLRTA
Trigger: TGCAGTTCTCAGTTTGGCATCATGGTCGTTTTGGCAGAAACACTTTCCTTGGAGAGGCAGAGATCCAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp CATGATTATGCCATACTGCTACACTGTGGCCCGAGGTaGCATCTCCAAAGTAATATTTCCCTGGCCTCTGTA +
Preference number: 3 (lower is better)
Translates to: HDYAILLHCGPR*HLQSNISLASV
Trigger: TACAGAGGCCAGGGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAACTTGGCTCTTCTGGTaGACACAGTGGGATGTAGAC +
Preference number: 3 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSTWLFW*TQWDVD
Trigger: GTCTACATCCCACTGTGTCAACCAGAAGAGCCAAGT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGGGTTTTTCTTTTTCCTaGGCGGGACTTGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGGFSFS*AGLVRQ
Trigger: CTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACC...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAGCAGAAAATACATGTTaGTACACATACACACACACA +
Preference number: 3 (lower is better)
Translates to: GWETKEQVTARDPKLCLPAENTC*YTYTHT
Trigger: TGTGTGTGTGTATGTGTACAAACATGTATTTTCTGC...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAGCAGAAAATACATGTTaGTACACATACACACACACA +
Preference number: 3 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKAENTC*YTYTHT
Trigger: TGTGTGTGTGTATGTGTACAAACATGTATTTTCTGC...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAAGAACTGGAAAAAGCTaGGGAATTCTGTTAGCATTT +
Preference number: 3 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKRTGKS*GILLAF
Trigger: AAATGCTAACAGAATTCCCAAGCTTTTTCCAGTTCT...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAG +
Preference number: 3 (lower is better)
Translates to: GWETKEQVTARDPKLCLPNRKVS*INEYQK
Trigger: CTTCTGGTACTCATTGATCAAACTGACCTTTCTATT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATTGTCACCTGGTCATGTaGCAGAGGAATAGCTACAGC +
Preference number: 3 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHCHLVM*QRNSYS
Trigger: GCTGTAGCTATTCCTCTGCAACATGACCAGGTGACA...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CAA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGTGTTCCCTGAGCACTTaGAGTTTCCTCACTCAAAGC +
Preference number: 3 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKCSLST*SFLTQS
Trigger: GCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 72 bp GCACCTTCCTTTCTGGTAGTAATCGGTCATGCGAGCTaGCATTCTCTTCCTGTGTGTGAGTGTGAACAAATT +
Preference number: 3 (lower is better)
Translates to: APSFLVVIGHAS*HSLPVCECEQI
Trigger: AATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCGCATGACCGATTACTACCAGAAAGGAAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 72 bp TATTTCCCTGGCCTCTGTAACCAAGAGCATAGCAATTaGAGCTCCATGAATTGCTTTACTTCCCACTTGGAA +
Preference number: 3 (lower is better)
Translates to: YFPGLCNQEHSN*SSMNCFTSHLE
Trigger: TTCCAAGTGGGAAGTAAAGCAATTCATGGAGCTCCAATTGCTATGCTCTTGGTTACAGAGGCCAGGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 72 bp TTTCACTTTCCTCCTCTCCATATAGATATGCCATGGTaGCATGTGATGTCAAAAATGTCACCTCAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: FHFPPLHIDMPW*HVMSKMSPQAL
Trigger: GAGGGCTTGAGGTGACATTTTTGACATCACATGTCACCATGGCATATCTATATGGAGAGGAGGAAAGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 72 bp TTTACACAGAACTCACACTTGATAGACAAATGCCTCTaGAATTGCTGTCAAACTCAGAAACACCAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: FTQNSHLIDKCL*NCCQTQKHQQG
Trigger: CCCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAGTGTGAGTTCTGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR GCA 72 bp ACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATaGCTTCCATTACAATTGCAATCCACACCAAATCAA +
Preference number: 3 (lower is better)
Translates to: TKEQVTARDPKL*LPLQLQSTPNQ
Trigger: TTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR GCA 72 bp TGTAACCAAGAGCATAGCAATTGGAGCTCCATGAATTaGTTTACTTCCCACTTGGAAGTAAAGCAGTGGCTT +
Preference number: 3 (lower is better)
Translates to: CNQEHSNWSSMN*FTSHLEVKQWL
Trigger: AAGCCACTGCTTTACTTCCAAGTGGGAAGTAAAGCAATTCATGGAGCTCCAATTGCTATGCTCTTGGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAGAACTGGAAAAAGCTaGGGAATTCTGTTAGCATTT +
Preference number: 3 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSRTGKS*GILLAF
Trigger: AAATGCTAACAGAATTCCCAAGCTTTTTCCAGTTCT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR TCA 72 bp TTAAAGCAGACTACCTTTCCATGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGCTTCCAGGAATCCATC +
Preference number: 3 (lower is better)
Translates to: LKQTTFPCKGRQ*SSFLSSFQESI
Trigger: GATGGATTCCTGGAAGCTTGATAAGAAACTGGATCATTGCCTCCCTTTACATGGAAAGGTAGTCTGCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CCA 72 bp TTCCTCTCTGCTATACACTCCTTCCACACACAACTTTaGGTAGAAACGCTTATGAGAATAGAAAGGTCAGTT +
Preference number: 3 (lower is better)
Translates to: FLSAIHSFHTQL*VETLMRIERSV
Trigger: AACTGACCTTTCTATTCTCATAAGCGTTTCTACCCAAAGTTGTGTGTGGAAGGAGTGTATAGCAGAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAG +
Preference number: 3 (lower is better)
Translates to: NQLAADSVERDFLSAIHSNRKVS*INEYQK
Trigger: CTTCTGGTACTCATTGATCAAACTGACCTTTCTATT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR TCA 72 bp TGTTCCTGTTTCCCTAAATATCAATCTTCATGCTTATaGCAGAACCAGGCCCTGATTCTTAAATGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: CSCFPKYQSSCL*QNQALILKCSL
Trigger: AAGGGAACATTTAAGAATCAGGGCCTGGTTCTGTCATAAGCATGAAGATTGATATTTAGGGAAACAGGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR TCA 72 bp ATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATaGCTGCAGTATCAGTTTAAAATGCAGAAAATTCAG +
Preference number: 3 (lower is better)
Translates to: IFHSRNEELSLQ*LQYQFKMQKIQ
Trigger: CTGAATTTTCTGCATTTTAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR TCA 72 bp TTCCATTACAATTGCAATCCACACCAAATCAATCTTTaGAAACATTCCTCCATTCGGTTCATACATACAGTA +
Preference number: 3 (lower is better)
Translates to: FHYNCNPHQINL*KHSSIRFIHTV
Trigger: TACTGTATGTATGAACCGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCACCCACGAACATCTGGGGAAGGCACACTCCCCCGCCCGCATTGCTCACATCTATCGAGAAGTCCCAGTaGCGGTTTCAAGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: APTNIWGRHTPPPALLTSIEKSQ*RFQGRV
Trigger: GACCCTCCCTTGAAACCGGCACTGGGACTTCTCGAT...AGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACGGCCCAGGCTCTCCTaGCACCGGGCACAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPRPRLS*HRAQVR
Trigger: TCGGACCTGTGCCCGGTGCCAGGAGAGCCTGGGCCG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCACCCACGAACATCTGGGGAAGGCACACTCCCCCGCCCGCATTGCTCACATCTCATTGCTTTCCTGTATaGGGCAGTCCCGACACACCA +
Preference number: 4 (lower is better)
Translates to: APTNIWGRHTPPPALLTSHCFPV*GSPDTP
Trigger: TGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATG...AGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGACCTTGGCGCACACCTTaGACCTCCAGGTACCATTGC +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRPWRTP*TSRYHC
Trigger: GCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGG...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCACCCACGAACATCTGGGGAAGGCACACTCCCCCGCCCGCATTGCTCACATCTAGCCACTTTGCATGCTaGTTCTGGCTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: APTNIWGRHTPPPALLTSSHFAC*FWLASG
Trigger: GCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCT...AGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGAAGCTCTGTTCAAGAGTaGCCGGACAGATGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRSSVQE*PDRCRG
Trigger: ACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACCAGGAAGTCATTGCTaGCCAGGGGCTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPPGSHC*PGAPGP
Trigger: GGGACCGGGAGCCCCTGGCCAGCAATGACTTCCTGG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGACTTCCATATCCACATTaGGGCCTGGGACGGATTTGC +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRLPYPH*GLGRIC
Trigger: GCAAATCCGTCCCAGGCCTCAATGTGGATATGGAAG...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAATCACTTCCTCTGACCTaGCCTCGCCAGGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKSLPLT*PRQGWT
Trigger: GGTCCAGCCCTGGCGAGGGCAGGTCAGAGGAAGTGA...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CGAGCTGACATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACCCTTGCGGCCCAGGCTCTCCTaGCACCGGGCACAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RADILFLCVSVNKFCSPLRPRLS*HRAQVR
Trigger: TCGGACCTGTGCCCGGTGCCAGGAGAGCCTGGGCCG...CAAGGGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GCACCCACGAACATCTGGGGAAGGCACACTCCCCCGCCCGCATTGCTCACATCTTTTGCATGCTGCTTCTaGCTAGCTTCTGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: APTNIWGRHTPPPALLTSFACCF*LASGDV
Trigger: TACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAA...AGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATGCCCTCGCCAGGGCTaGACCTGCAGAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPCPRQG*TCRRGQ
Trigger: CTGTCCTCTTCTGCAGGTCCAGCCCTGGCGAGGGCA...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGACCTCAGACACAGACATaGCCCACTGAAGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: TSLLPQKQISSVQECPDRPQTQT*PTEARV
Trigger: GACACGGGCTTCAGTGGGCCATGTCTGTGTCTGAGG...TCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCACAGACATGGCCCACTaGAGCCCGTGTCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGTDMAH*SPCHLV
Trigger: GACCAGGTGACACGGGCTTCAGTGGGCCATGTCTGT...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACGATGTCGATCAACCCTaGCAGAGCCCCTCTCATGAC +
Preference number: 4 (lower is better)
Translates to: YTSLLPQKQISSVQECPDDVDQP*QSPSHD
Trigger: GTCATGAGAGGGGCTCTGGCAGGGTTGATCGACATC...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CCGGGGTCTGGTCTCTGGTCTCAGAGCATCAGTCAGGTTCCAGAAGCACTCACGTGGCACTCCTTCACATaGACAACCAGACTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PGSGLWSQSISQVPEALTWHSFT*TTRLWV
Trigger: AACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCA...CGTGAGTGCTTCTGGAACCTGACTGATGCTCTGAGACCAGAGACCAGACCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACCATACTGCTACACTGTaGCCCGAGGTGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: YTSLLPQKQISSVQECPDHTATL*PEVPSP
Trigger: TGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATG...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAGGCCTGGGACGGATTTaGTTCTGTCTCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPGLGRI*FCLPRS
Trigger: GCTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCC...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCGCACCCACGAACATCTaGGGAAGGCACACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: YAILLHCGPRCHLQSNISAPTNI*GRHTPP
Trigger: CGGGGGAGTGTGCCTTCCCCAGATGTTCGTGGGTGC...GGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACAACAGATGCCGGGGTCTaGTCTCTGGTCTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTTDAGV*SLVSEH
Trigger: ATGCTCTGAGACCAGAGACCAGACCCCGGCATCTGT...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACAAGCCTCCCAAGTAGCTaGGATTACAGGCTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTSLPSS*DYRLAP
Trigger: TGGCGCAAGCCTGTAATCCCAGCTACTTGGGAGGCT...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAGGCGCAGGGACATCCTaGTTATCTCACTACCTGTGC +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKGAGTS*LSHYLC
Trigger: GCACAGGTAGTGAGATAATCAGGATGTCCCTGCGCC...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACAACTCGCCTTTGTGTaGTGGCAAGCCAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKQLAFV*WQASRG
Trigger: TCCCCGACTGGCTTGCCATCACACAAAGGCGAGTTG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAACCACTTCCCCATTACTaGTCCCAGTGCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKPLPHY*SQCQHP
Trigger: TGGGTGTTGGCACTGGGATCAGTAATGGGGAAGTGG...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGACGGCCGAGCGCTGTaGGAGGAACCCACGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSDGRAL*EEPTKR
Trigger: CCTTTTCGTGGGTTCCTCTCACAGCGCTCGGCCGTC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS-3UTR TCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGATGGGATCTCATACTGTaGAGGGAAAGTAAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRWDLIL*RESKSP
Trigger: TGGGCTTTTACTTTCCCTTCACAGTATGAGATCCCA...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACACTGTAGTGTTGGCTaGCCCTCTTGGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKHCSVG*PSWPLS
Trigger: GGAAAGGGGCCAAGAGGGGCAGCCAACACTACAGTG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACAATGGAGGAGCCACTTTaGATGCTGCTTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTMEEPL*MLLLAS
Trigger: GCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCAT...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGACAAGGAAAGTGTTTCTaGCAAAACGACCATGATGCC +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRQGKCF*QNDHDA
Trigger: GGCATCATGGTCGTTTTGGCAGAAACACTTTCCTTG...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCCCCAGGTCCCGAATCTaGTCTAGGGAGGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGPRSRI*SREVLL
Trigger: AAGAAGCACCTCCCTAGAGCAGATTCGGGACCTGGG...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACGACAAGTATTGGTTTTaGGACTCAAACGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YTSLLPQKQISSVQECPDDKYWF*DSNGPG
Trigger: GCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTC...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATCTTTGATCCACACCTaGAGCTCTCCCCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPSLIHT*SSPPSP
Trigger: TGGGGAAGGGGGAGAGCTCCAGGTGTGGATCAAAGA...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCGGGGTCTGGTCTCTGGTCTCAGAGCATCAGTCAGGTTCCAGAAGCACTCACGTTGGAAGTAAAGCAGTaGCTTGGCAAAAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: PGSGLWSQSISQVPEALTLEVKQ*LGKRVQ
Trigger: CTGTACCCTTTTGCCAAGCCACTGCTTTACTTCCAA...CGTGAGTGCTTCTGGAACCTGACTGATGCTCTGAGACCAGAGACCAGACCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAATCTGCCGCTCCTGAATaGTCTTTCTTCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKSAAPE*SFFLAR
Trigger: TCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGA...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAACCATGATGCCAAACTaGGAACTGCAGGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKTMMPN*ELQGPL
Trigger: CAGAGGACCCTGCAGTTCTCAGTTTGGCATCATGGT...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATTGCCAACACCCAGCCTaGCCCCTCCCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNCQHPA*PLPGSH
Trigger: ATGACTTCCTGGGAGGGGTCAGGCTGGGTGTTGGCA...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACTTCTGCTTGGCCATTaGGGAACGGAGCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKLLLGH*GTELQS
Trigger: ACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGAAATCCTTTTCTCATCTaGTTTCCGGACCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRNPFLI*FPDLFI
Trigger: GATGAAGAGGTCCGGAAAGCAGATGAGAAAAGGATT...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTCACTGTAGTGTTGGCTaGCCCTCTTGGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPAHCSVG*PSWPLS
Trigger: GGAAAGGGGCCAAGAGGGGCAGCCAACACTACAGTG...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACATTGCTTTCCTGTATaGGGCAGTCCCGACACACCA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPHCFPV*GSPDTP
Trigger: TGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACAACCTCCAGGTACCATTaGTTTCCTGTATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTTSRYH*FPVCGS
Trigger: ACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGT...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGAAGGTAAGTCTTCACGGCCTGGGACGGATTTaGTTCTGTCTCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGFSFSLAGLVRQKVSLHGLGRI*FCLPRS
Trigger: GCTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCC...GTGAAGACTTACCTTCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAATTGAGGAACGGAGCTaGAGAGTCCCTTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPIEERS*RVPSAQ
Trigger: TTGGGCAGAAGGGACTCTGCAGCTCCGTTCCTCAAT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACAATTCCAACACAGGTCTaGACTCAGATCCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTIPTQV*TQIPGM
Trigger: CATGCCTGGGATCTGAGTGCAGACCTGTGTTGGAAT...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGAAGGTAAGTCTTCACTTGCCCAGGCTGGAGTaGAAAGGCGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AGFSFSLAGLVRQKVSLHLPRLE*KGAISA
Trigger: AGCCGAGATTGCGCCTTTGCACTCCAGCCTGGGCAA...GTGAAGACTTACCTTCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACCAGAGAGTCTCTCCTaGAGGTGCTATCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKPESLS*RCYPSQ
Trigger: CTGACTCGGATAGCACCTCCAGGAGAGACTCTCTGG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGG +
Preference number: 4 (lower is better)
Translates to: YTSLLPQKQISSVQECPDLLASF*RCNFTR
Trigger: CCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAG...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATCTTTGATCCACACCTaGAGCTCTCCCCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKSLIHT*SSPPSP
Trigger: TGGGGAAGGGGGAGAGCTCCAGGTGTGGATCAAAGA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAACCCAGCTTCTGCTTaGCCATTGAGGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPNPASA*PLRNGA
Trigger: AGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTCCGGGGTCTGGTCTCTaGTCTCAGAGCATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPAPGSGL*SQSISQ
Trigger: CTGACTGATGCTCTGAGACCAGAGACCAGACCCCGG...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATCCCGACACACCAGGTaGTTACAACCCCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKSRHTR*LQPRQV
Trigger: TACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTGGCGCAGGGACATCCTaGTTATCTCACTACCTGTGC +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPAGAGTS*LSHYLC
Trigger: GCACAGGTAGTGAGATAATCAGGATGTCCCTGCGCC...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAGAAGGAGGTATCCCTTaGCAAAGCTGTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPEGGIP*QSCLKS
Trigger: GGACTTCAGACAGCTTTGTCAAGGGATACCTCCTTC...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATTTTCTTCACTTCCTCTaGCCTGCCCTCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNFLHFL*PALARA
Trigger: AGCCCTGGCGAGGGCAGGTCAGAGGAAGTGAAGAAA...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTTTCTTCACTTCCTCTaGCCTGCCCTCGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCFLHFL*PALARA
Trigger: AGCCCTGGCGAGGGCAGGTCAGAGGAAGTGAAGAAA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACTAGTTCCCTGTGGCTaGCTGGCCAACGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLVPCG*LANARE
Trigger: TTCTCTGGCGTTGGCCAGTCAGCCACAGGGAACTAG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372989.5
CDS-3UTR TCA 90 bp GAGCATCAGTCAGGTTCCAGAAGCACTCACGGGTTAGAGCGCTTCTTGGCTTCATTGTTAACCATACCCTaGTGTCGATCAACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EHQSGSRSTHGLERFLASLLTIP*CRSTLP
Trigger: TGGCAGGGTTGATCGACATCAGGGTATGGTTAACAA...TGAAGCCAAGAAGCGCTCTAACCCGTGAGTGCTTCTGGAACCTGACTGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACCTTGGCGCACACCTTaGACCTCCAGGTACCATTGC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSPWRTP*TSRYHC
Trigger: GCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGGCCTGGGACGGATTTaGTTCTGTCTCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSGLGRI*FCLPRS
Trigger: GCTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCAGGAGCCACTTTGCATaGTGCTTCTGGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGRSHFA*CFWLAS
Trigger: AGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCT...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAGATGCTCATCATGCTaGCGATCGTACTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPRCSSC*RSYSWR
Trigger: CCTCCATGAGTACGATCGGCAGCATGATGAGCATCT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACTGCAGAGTCCCTTCTaGCCAAGACCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLQSPF*PRPWVL
Trigger: CAGTACCCAGGGTCTTGGGCAGAAGGGACTCTGCAG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACATAAACCCAGCTTCTaGTTGGCCATTGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPHKPSF*LAIEER
Trigger: CCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GAGCATCAGTCAGGTTCCAGAAGCACTCACGGGTTAGAGCGCTTCTTGGCTTCAGTCACCTGGTCATGTTaGAGAGGAATAGCTACAGCT +
Preference number: 4 (lower is better)
Translates to: EHQSGSRSTHGLERFLASVTWSC*RGIATA
Trigger: AGCTGTAGCTATTCCTCTGCAACATGACCAGGTGAC...TGAAGCCAAGAAGCGCTCTAACCCGTGAGTGCTTCTGGAACCTGACTGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCTCTGTTCAAGAGTGCCCGGACAGATGCCGGGGTCTGGTCTCTGGTCTCAGATTGTCCAAAAAGAACTaGCAAGGAGACTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: SSVQECPDRCRGLVSGLRLSKKN*QGDSLS
Trigger: AGATAAGGAGTCTCCTTGGCAGTTCTTTTTGGACAA...TCTGAGACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTCTTGAACAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACACACTGTGGCCCGAGGTaGCATCTCCAAAGTAATATT +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTHCGPR*HLQSNI
Trigger: AATATTACTTTGGAGATGGCACCTCGGGCCACAGTG...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACTCACTGCAGGTTTGTaGCGCAGGGACATCCTGATT +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKLTAGL*RRDILI
Trigger: AATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACTTCAAATAGCACACTaGGCTCCTTCTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKLQIAH*APSAAP
Trigger: AGGAGCGGCAGAAGGAGCCCAGTGTGCTATTTGAAG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATGGCACTCCTTCACATaGACAACCAGACTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPWHSFT*TTRLWV
Trigger: AACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCA...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAGGCCAGGAGAGATTCTaGGATCTCATACCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKGQERF*DLIPQR
Trigger: ACGCTGAGGTATGAGATCCCAGAATCTCTCCTGGCC...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAAACCCAGCTTCTGCTTaGCCATTGAGGAACGGAGCT +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKNPASA*PLRNGA
Trigger: AGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTTGCCTGTGGCTGACTaGCCAACGCCAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSLPVAD*PTPEKP
Trigger: CGGCTTCTCTGGCGTTGGCCAGTCAGCCACAGGCAA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATTTACTAGTTCCCTGTaGCTGACTGGCCAACGCCAG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKFTSSL*LTGQRQ
Trigger: CTGGCGTTGGCCAGTCAGCCACAGGGAACTAGTAAA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372989.5
3UTR CAA 72 bp ATGGCACTCCTTCACATGGACAACCAGACTCTGGGTTaGCTGCTCATACTTCAGGGAAAAGGCAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: MALLHMDNQTLG*LLILQGKGNPA
Trigger: GGCAGGATTGCCTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTCCCGACACACCAGGTaGTTACAACCCCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPASRHTR*LQPRQV
Trigger: TACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGA...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAGAAGGAGGTATCCCTTaGCAAAGCTGTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKEGGIP*QSCLKS
Trigger: GGACTTCAGACAGCTTTGTCAAGGGATACCTCCTTC...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAATTCAGCATGGGCTGTaGGACACTTTACCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKIQHGL*DTLPSV
Trigger: GACTGAGGGTAAAGTGTCTCACAGCCCATGCTGAAT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GAGCATCAGTCAGGTTCCAGAAGCACTCACGGGTTAGAGCGCTTCTTGGCTTCAAACCAAAGACAGCACTaGGTAATTTGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EHQSGSRSTHGLERFLASNQRQH*VICWPF
Trigger: GAAAGGCCAGCAAATTACTCAGTGCTGTCTTTGGTT...TGAAGCCAAGAAGCGCTCTAACCCGTGAGTGCTTCTGGAACCTGACTGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GAGCATCAGTCAGGTTCCAGAAGCACTCACGGGTTAGAGCGCTTCTTGGCTTCATGGGAGATCAGGATGTaGACAGATACCCAATGTATC +
Preference number: 4 (lower is better)
Translates to: EHQSGSRSTHGLERFLASWEIRM*TDTQCI
Trigger: GATACATTGGGTATCTGTTCACATCCTGATCTCCCA...TGAAGCCAAGAAGCGCTCTAACCCGTGAGTGCTTCTGGAACCTGACTGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGGTGGTCTCGAACTCCTaGCCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGVVSNS*PQVICL
Trigger: CAGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAC...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAAGATGCTCATCATGCTaGCGATCGTACTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKRCSSC*RSYSWR
Trigger: CCTCCATGAGTACGATCGGCAGCATGATGAGCATCT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACAGCTTCACTGTAGATaGTCATCATGCTGCCGATCG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKQLHCR*SSCCRS
Trigger: CGATCGGCAGCATGATGAGCATCTACAGTGAAGCTG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAGGGAAAAGGCAATCCTaGCAGTCACAAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPGKRQS*QSQRCS
Trigger: GGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCC...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACAAGACTCTGGGTTTGCTaGTCATACTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTRLWVC*SYFREK
Trigger: CTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCT...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAACATAAACCCAGCTTCTaGTTGGCCATTGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKHKPSF*LAIEER
Trigger: CCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATG...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGAGAGCTACCAGAGTTaGCTGTGGCTGACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNESYQS*LWLTGQ
Trigger: TTGGCCAGTCAGCCACAGGCAACTCTGGTAGCTCTC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS-3UTR GCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTGAGTGCCCGGACAGATaGCGGGGTCTGGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFECPDR*RGLVSG
Trigger: ACCAGAGACCAGACCCCGGCATCTGTCCGGGCACTC...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACAAATGATCTTTCTTCCTaGCCAGATGTCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTNDLSS*PDVTHL
Trigger: CAGATGGGTGACATCTGGCCAGGAAGAAAGATCATT...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGAAGGTAAGTCTTCACCTTCAAATAGCACACTaGGCTCCTTCTGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGFSFSLAGLVRQKVSLHLQIAH*APSAAP
Trigger: AGGAGCGGCAGAAGGAGCCCAGTGTGCTATTTGAAG...GTGAAGACTTACCTTCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACCAGAGAGTCTCTCCTaGAGGTGCTATCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSPESLS*RCYPSQ
Trigger: CTGACTCGGATAGCACCTCCAGGAGAGACTCTCTGG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAACTCCAACAGGGGTTTTaGAGGCTGGGATGTATTTCA +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKLQQGF*RLGCIS
Trigger: TGAAATACATCCCAGCCTCCAAAACCCCTGTTGGAG...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCATTCTGGTTGACACAGTaGGATGTAGACCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPFWLTQ*DVDHAL
Trigger: CAGAGCATGGTCTACATCCCACTGTGTCAACCAGAA...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACAGATTCAAAGCAAAACCATaGCTTCACACTTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TSLLPQKQISSVQECPDRFKAKP*LHTLPG
Trigger: ACCAGGCAAAGTGTGAAGCCATGGTTTTGCTTTGAA...TCTGTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp AAGGCACACTCCCCCGCCCGCATTGCTCACATCTTCCCTCATGATAAAACCACACTCGCTGTAGAACACTaGGAATCAAATCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KAHSPARIAHIFPHDKTTLAVEH*ESNPFP
Trigger: AGGAAAAGGATTTGATTCTCAGTGTTCTACAGCGAG...TGTGGTTTTATCATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGTGTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACTTCCATATCCACATTaGGGCCTGGGACGGATTTGC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLPYPH*GLGRIC
Trigger: GCAAATCCGTCCCAGGCCTCAATGTGGATATGGAAG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCCTTCCATATCCACATTaGGGCCTGGGACGGATTTGC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCLPYPH*GLGRIC
Trigger: GCAAATCCGTCCCAGGCCTCAATGTGGATATGGAAG...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAACCATGATGCCAAACTaGGAACTGCAGGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSTMMPN*ELQGPL
Trigger: CAGAGGACCCTGCAGTTCTCAGTTTGGCATCATGGT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATGCCAACACCCAGCCTaGCCCCTCCCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLCQHPA*PLPGSH
Trigger: ATGACTTCCTGGGAGGGGTCAGGCTGGGTGTTGGCA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCCCACTTCCCCATTACTaGTCCCAGTGCCAACACCCA +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSPLPHY*SQCQHP
Trigger: TGGGTGTTGGCACTGGGATCAGTAATGGGGAAGTGG...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGTCACTCTGGTCCTCTaGGATCAGCTAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNVTLVL*DQLEAL
Trigger: GAGAGCTTCTAGCTGATCTCAGAGGACCAGAGTGAC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGTCACTCTGGTCCTCTaGGATCAGCTAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCVTLVL*DQLEAL
Trigger: GAGAGCTTCTAGCTGATCTCAGAGGACCAGAGTGAC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACTTTCATTCGAGAAATaGGGAGCTCTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPLSFEK*GALSPM
Trigger: CATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAAACACTGGGCCAATTaGGATAACACTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPKHWAN*DNTWLF
Trigger: GAAGAGCCAAGTGTTATCTCAATTGGCCCAGTGTTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCCAATCTTCATGCTTATaGCAGAACCAGGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGQSSCL*QNQALI
Trigger: AATCAGGGCCTGGTTCTGTCATAAGCATGAAGATTG...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAATCGGTCATGCGAGCTaGCATTCTCTTCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKIGHAS*HSLPVC
Trigger: ACACACAGGAAGAGAATGTCAGCTCGCATGACCGAT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCGAGAGCTACCAGAGTTaGCTGTCACTTGCAACAGGT +
Preference number: 4 (lower is better)
Translates to: YAILLHCGPRCHLQSNISESYQS*LSLATG
Trigger: ACCTGTTGCAAGTGACAGGCAACTCTGGTAGCTCTC...GGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATATGGAGGAGCCACTTTaGATGCTGCTTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNMEEPL*MLLLAS
Trigger: GCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCAT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATGTAGATGCTCATCATaGTGCCGATCGTACTCATGG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKCRCSS*CRSYSW
Trigger: CCATGAGTACGATCGGCAGCATGATGAGCATCTACA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCTCAACTCTATTTCCTTaGCGCACACCTTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: YAILLHCGPRCHLQSNISSTLFP*RTPCTS
Trigger: GGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGA...GGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCTCACTGCAGGTTTGTaGCGCAGGGACATCCTGATT +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNLTAGL*RRDILI
Trigger: AATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACAATGTACCACATCTTCTaGGCGAAGATCTATCACAGA +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTMYHIF*AKIYHR
Trigger: TCTGTGATAGATCTTCGCCCAGAAGATGTGGTACAT...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATTTGCATGCTGCTTCTaGCTAGCTTCTGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKFACCF*LASGDV
Trigger: TACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATGCCGATCGTACTCATaGAGGAGCCACTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSCRSYS*RSHFAC
Trigger: GCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTTCCAGGAATCCATCTaGATCTCTGCCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPAFQESI*ISASPR
Trigger: CCTTGGAGAGGCAGAGATCCAGATGGATTCCTGGAA...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCACCAGGAAGTCATTGCTaGCCAGGGGCTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPPGSHC*PGAPGP
Trigger: GGGACCGGGAGCCCCTGGCCAGCAATGACTTCCTGG...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTCTGCCCAAGACCCTaGGTACTGTCGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSFCPRP*VLSHLL
Trigger: CAGAAGATGCGACAGTACCCAGGGTCTTGGGCAGAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAGCAGAAAATTCAGCATaGGCTGTGAGACACTTTACC +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKAENSA*AVRHFT
Trigger: GGTAAAGTGTCTCACAGCCCATGCTGAATTTTCTGC...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAGAAGCCCGTGTCACCTaGTCATGTTGCAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKEARVT*SCCRGI
Trigger: TATTCCTCTGCAACATGACCAGGTGACACGGGCTTC...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAACTCGCTGTAGAACACTaGGAATCAAATCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKLAVEH*ESNPFP
Trigger: AGGAAAAGGATTTGATTCTCAGTGTTCTACAGCGAG...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGTCTGCCGCTCCTGAATaGTCTTTCTTCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKSAAPE*SFFLAR
Trigger: TCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGA...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGACCATGATGCCAAACTaGGAACTGCAGGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGTMMPN*ELQGPL
Trigger: CAGAGGACCCTGCAGTTCTCAGTTTGGCATCATGGT...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAGTTCTTGGCTTCTTTaGTCCACACCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCSSWLL*STPGAL
Trigger: GAGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAGAGTTGCCTGTGGCTaGCTGGCCAACGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLRVACG*LANARE
Trigger: TTCTCTGGCGTTGGCCAGTCAGCCACAGGCAACTCT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCATTCAGCATGGGCTGTaGGACACTTTACCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCIQHGL*DTLPSV
Trigger: GACTGAGGGTAAAGTGTCTCACAGCCCATGCTGAAT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGATAAGCCAGTGCTGCTaGCATTCCTTGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGISQCC*HSLTQR
Trigger: CCTCTGGGTCAAGGAATGTCAGCAGCACTGGCTTAT...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp ACAGGTCTGCACTCAGATCCCAGGCATGATTATGCCATACTGCTACACTGTGGCGATTATTCCAAAACCTaGGCAACCATTCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TGLHSDPRHDYAILLHCGDYSKT*ATIPEV
Trigger: GACTTCAGGAATGGTTGCTCAGGTTTTGGAATAATC...GCCACAGTGTAGCAGTATGGCATAATCATGCCTGGGATCTGAGTGCAGACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTCTCAGATCCCAGGCATaGTTATGCCATACTGCTACA +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPALRSQA*LCHTAT
Trigger: TGTAGCAGTATGGCATAATCATGCCTGGGATCTGAG...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTCATCTAGTTGGCAAGTaGCAGAACCAGGATTCCAAC +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPAHLVGK*QNQDSN
Trigger: GTTGGAATCCTGGTTCTGTCACTTGCCAACTAGATG...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCGTCACTTGCAACAGGTaGCTCCAGAGATCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCVTCNR*LQRSRS
Trigger: ACTTCTCGATCTCTGGAGGCACCTGTTGCAAGTGAC...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTCACTGTAGTGTTGGCTaGCCCTCTTGGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSHCSVG*PSWPLS
Trigger: GGAAAGGGGCCAAGAGGGGCAGCCAACACTACAGTG...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCCATTGCTTTCCTGTATaGGGCAGTCCCGACACACCA +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSHCFPV*GSPDTP
Trigger: TGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATG...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAACCTCCAGGTACCATTaGTTTCCTGTATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSTSRYH*FPVCGS
Trigger: ACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAGCCACTTTGCATGCTaGTTCTGGCTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSSHFAC*FWLASG
Trigger: GCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATAGGAGCCACTTTGCATaGTGCTTCTGGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNRSHFA*CFWLAS
Trigger: AGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGCTTCACTGTAGATaGTCATCATGCTGCCGATCG +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNQLHCR*SSCCRS
Trigger: CGATCGGCAGCATGATGAGCATCTACAGTGAAGCTG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATACTGTCGCATCTTCTaGCACAGGCTCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSYCRIF*HRLTSS
Trigger: GGAAGAAGTGAGCCTGTGGCAGAAGATGCGACAGTA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTACTGCAGAGTCCCTTCTaGCCAAGACCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLLQSPF*PRPWVL
Trigger: CAGTACCCAGGGTCTTGGGCAGAAGGGACTCTGCAG...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATCACTTCCTCTGACCTaGCCTCGCCAGGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPSLPLT*PRQGWT
Trigger: GGTCCAGCCCTGGCGAGGGCAGGTCAGAGGAAGTGA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACGGGATCCCAAGTTATaGCTTCCATTACAATTGCAA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPRDPKL*LPLQLQ
Trigger: TTGCAATTGTAATGGAAGGCATAACTTGGGATCCCG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAAACCCCGACAAGTATTaGTTTTGGGACTCAAACGGC +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKNPDKY*FWDSNG
Trigger: GCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAAATGATCTTTCTTCCTaGCCAGATGTCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKNDLSS*PDVTHL
Trigger: CAGATGGGTGACATCTGGCCAGGAAGAAAGATCATT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATCCAGAGAGTCTCTCCTaGAGGTGCTATCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHPESLS*RCYPSQ
Trigger: CTGACTCGGATAGCACCTCCAGGAGAGACTCTCTGG...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACACATCTTCTTCCATTCTaGAAAGAGGCCAGATTTATC +
Preference number: 4 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTHLLPF*KEARFI
Trigger: GATAAATCTGGCCTCTTTCCAGAATGGAAGAAGATG...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATATCCACATTGAGGCCTaGGACGGATTTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNIHIEA*DGFASV
Trigger: GACAGAAGCAAATCCGTCCCAGGCCTCAATGTGGAT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCGGCCAGGAGAGATTCTaGGATCTCATACCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSGQERF*DLIPQR
Trigger: ACGCTGAGGTATGAGATCCCAGAATCTCTCCTGGCC...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATACCAGAGTTGCCTGTaGCTGACTGGCCAACGCCAG +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLYQSCL*LTGQRQ
Trigger: CTGGCGTTGGCCAGTCAGCCACAGGCAACTCTGGTA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAGGCGCAGGGACATCCTaGTTATCTCACTACCTGTGC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLGAGTS*LSHYLC
Trigger: GCACAGGTAGTGAGATAATCAGGATGTCCCTGCGCC...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGTATCCGAGTCAGCTGTaGAGCTATCCAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGYPSQL*SYPDSH
Trigger: GTGAGAGTCTGGATAGCTTCACAGCTGACTCGGATA...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTCTTCTGCTTGGCCATTaGGGAACGGAGCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSLLLGH*GTELQS
Trigger: ACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAG...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAGAGCTCTCTCTCCAATaGCTGCAGTATCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKELSLQ*LQYQFK
Trigger: TTTAAACTGATACTGCAGTCATTGGAGAGAGAGCTC...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTGCCATGGTGACATGTaGTGTCAAAAATGTCACCTC +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPACHGDM*CQKCHL
Trigger: GAGGTGACATTTTTGACATCACATGTCACCATGGCA...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAGGAGCCACTTTGCATaGTGCTTCTGGCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSRSHFA*CFWLAS
Trigger: AGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGCAGCTTCACTGTAGATaGTCATCATGCTGCCGATCG +
Preference number: 4 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGQLHCR*SSCCRS
Trigger: CGATCGGCAGCATGATGAGCATCTACAGTGAAGCTG...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGGGAAAAGGCAATCCTaGCAGTCACAAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSGKRQS*QSQRCS
Trigger: GGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCACCAGACTCTGGGTTTaGTGCTCATACTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCTRLWV*CSYFRE
Trigger: TTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGT...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAACCAGACTCTGGGTTTaGTGCTCATACTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSTRLWV*CSYFRE
Trigger: TTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAGTTCCAGGCACATATaGTGTAGATCTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCSSRHI*CRSSSL
Trigger: GAGGCTGGAAGATCTACAGCATATGTGCCTGGAACT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCGACAAGTATTGGTTTTaGGACTCAAACGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSDKYWF*DSNGPG
Trigger: GCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTC...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAACCCCGACAAGTATTaGTTTTGGGACTCAAACGGC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCNPDKY*FWDSNG
Trigger: GCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAACCCCGACAAGTATTaGTTTTGGGACTCAAACGGC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSNPDKY*FWDSNG
Trigger: GCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTCAACTCTATTTCCTTaGCGCACACCTTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSSTLFP*RTPCTS
Trigger: GGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATCTCACTGCAGGTTTGTaGCGCAGGGACATCCTGATT +
Preference number: 4 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHLTAGL*RRDILI
Trigger: AATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAG...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACATCTTCTTCCATTCTaGAAAGAGGCCAGATTTATC +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPHLLPF*KEARFI
Trigger: GATAAATCTGGCCTCTTTCCAGAATGGAAGAAGATG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGATCCACATTGAGGCCTaGGACGGATTTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKIHIEA*DGFASV
Trigger: GACAGAAGCAAATCCGTCCCAGGCCTCAATGTGGAT...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTTTGCATGCTGCTTCTaGCTAGCTTCTGGCGATGTA +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCFACCF*LASGDV
Trigger: TACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATGGACAACCAGACTCTaGGTTTGCTGCTCATACTTC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSWTTRL*VCCSYF
Trigger: GAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTTCCAGGAATCCATCTaGATCTCTGCCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSFQESI*ISASPR
Trigger: CCTTGGAGAGGCAGAGATCCAGATGGATTCCTGGAA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAATTCCACACACAACTTTaGGTAGAAACGCTTATGAGA +
Preference number: 4 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKFHTQL*VETLMR
Trigger: TCTCATAAGCGTTTCTACCCAAAGTTGTGTGTGGAA...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATTCCCTGTGGCTGACTaGCCAACGCCAGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPFPVAD*PTPEKP
Trigger: CGGCTTCTCTGGCGTTGGCCAGTCAGCCACAGGGAA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372989.5
CDS-3UTR CCA 90 bp TATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCAGTGACTCATCTAGTTaGCAAGTGACAGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: YAILLHCGPRCHLQSNISSDSSS*QVTEPG
Trigger: TCCTGGTTCTGTCACTTGCCAACTAGATGAGTCACT...GGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 72 bp AATAGTGTCCCGCTTGATGCTGGTTTTTCTTTTTCCTaGGCGGGACTTGTCAGGCAGAAGGTAAGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NSVPLDAGFSFS*AGLVRQKVSLH
Trigger: GTGAAGACTTACCTTCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGCATCAAGCGGGACACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 72 bp AGCTTAGGGCACAAGACAGAACAAGTTCTCCTACCCTaGAGGTCTAGATACTTACCCTCAGCGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SLGHKTEQVLLP*RSRYLPSASHH
Trigger: ATGATGAGACGCTGAGGGTAAGTATCTAGACCTCAAGGGTAGGAGAACTTGTTCTGTCTTGTGCCCTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATCCCGACACACCAGGTaGTTACAACCCCGACAAGTA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLSRHTR*LQPRQV
Trigger: TACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATCTGCCGCTCCTGAATaGTCTTTCTTCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLSAAPE*SFFLAR
Trigger: TCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCACAACTCGCCTTTGTGTaGTGGCAAGCCAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPQLAFV*WQASRG
Trigger: TCCCCGACTGGCTTGCCATCACACAAAGGCGAGTTG...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAATAGAAAGGTCAGTTTaGTCAATGAGTACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GWETKEQVTARDPKLCLPIERSV*SMSTRR
Trigger: TCTTCTGGTACTCATTGATCAAACTGACCTTTCTAT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCACCTTGGCGCACACCTTaGACCTCCAGGTACCATTGC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPPWRTP*TSRYHC
Trigger: GCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGG...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TTCAGGGAAAAGGCAATCCTGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTTATCTCACTACCTGTaGGGTAAGCAAAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: FREKAILPVTKMFPKSPALSHYL*GKQSDS
Trigger: TGAATCGCTTTGCTTACCGCACAGGTAGTGAGATAA...AGCTGGTGATTTCGGGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTAGCCACTTTGCATGCTaGTTCTGGCTAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSSHFAC*FWLASG
Trigger: GCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCT...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAATGGAGGAGCCACTTTaGATGCTGCTTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLMEEPL*MLLLAS
Trigger: GCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCAT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTGGGAAAAGGCAATCCTaGCAGTCACAAAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: NESAHGSPSLLASLPQLFGKRQS*QSQRCS
Trigger: GGAACATCTTTGTGACTGGCAGGATTGCCTTTTCCC...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAGACTCTGGGTTTGCTaGTCATACTTCAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCRLWVC*SYFREK
Trigger: CTTTTCCCTGAAGTATGAGCAGCAAACCCAGAGTCT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAGGAAAGTGTTTCTaGCAAAACGACCATGATGCC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNQGKCF*QNDHDA
Trigger: GGCATCATGGTCGTTTTGGCAGAAACACTTTCCTTG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACAAGGAAAGTGTTTCTaGCAAAACGACCATGATGCC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSQGKCF*QNDHDA
Trigger: GGCATCATGGTCGTTTTGGCAGAAACACTTTCCTTG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAATTGAGGAACGGAGCTaGAGAGTCCCTTCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLIEERS*RVPSAQ
Trigger: TTGGGCAGAAGGGACTCTGCAGCTCCGTTCCTCAAT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATAGTTTCAGAAGCCCCTaGAATAAGCCAGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHSFRSP*NKPVLL
Trigger: CAGCAGCACTGGCTTATTGCAGGGGCTTCTGAAACT...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCTGTAGATGCTCATCATaGTGCCGATCGTACTCTGAA +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCCRCSS*CRSYSE
Trigger: TTCAGAGTACGATCGGCAGCATGATGAGCATCTACA...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGACCAGCAGAGGCTACTaGAGACAATTCTACCTCAGA +
Preference number: 4 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKTSRGY*RQFYLR
Trigger: TCTGAGGTAGAATTGTCTGCAGTAGCCTCTGCTGGT...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CGAGCTGACATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACCCTTGCATGGCTTCACACTTTaGCTGGTTTACACAGAACTC +
Preference number: 4 (lower is better)
Translates to: RADILFLCVSVNKFCSPLHGFTL*LVYTEL
Trigger: GAGTTCTGTGTAAACCAGGCAAAGTGTGAAGCCATG...CAAGGGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATAATGATCTTTCTTCCTaGCCAGATGTCACCCATCTG +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNNDLSS*PDVTHL
Trigger: CAGATGGGTGACATCTGGCCAGGAAGAAAGATCATT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGG +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSLLASF*RCNFTR
Trigger: CCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAG...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTGCCGATCGTACTCATaGAGGAGCCACTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSCRSYS*RSHFAC
Trigger: GCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGTAAGTCTTCACATATaGGTTAGAGCGCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNVSLHI*VRALLG
Trigger: GCCAAGAAGCGCTCTAACCCATATGTGAAGACTTAC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTTCTGCCCAAGACCCTaGGTACTGTCGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSFCPRP*VLSHLL
Trigger: CAGAAGATGCGACAGTACCCAGGGTCTTGGGCAGAA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGCAGAAAATTCAGCATaGGCTGTGAGACACTTTACC +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSAENSA*AVRHFT
Trigger: GGTAAAGTGTCTCACAGCCCATGCTGAATTTTCTGC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCAACACTTGGCTCTTCTaGTTGACACAGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCNTWLF*LTQWDV
Trigger: TACATCCCACTGTGTCAACCAGAAGAGCCAAGTGTT...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTATCCGAGTCAGCTGTaGAGCTATCCAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSYPSQL*SYPDSH
Trigger: GTGAGAGTCTGGATAGCTTCACAGCTGACTCGGATA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATATCCGAGTCAGCTGTaGAGCTATCCAGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLYPSQL*SYPDSH
Trigger: GTGAGAGTCTGGATAGCTTCACAGCTGACTCGGATA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTGGGATGTATTTCAATaGAACCACCAACTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCWDVFQ*NHQLAF
Trigger: AAAGGCGAGTTGGTGGTTTCATTGAAATACATCCCA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAGTTCTTGGCTTCTTTaGTCCACACCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLSSWLL*STPGAL
Trigger: GAGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGAGCTCTCTCTCCAATaGCTGCAGTATCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSELSLQ*LQYQFK
Trigger: TTTAAACTGATACTGCAGTCATTGGAGAGAGAGCTC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAAACACTGGGCCAATTaGGATAACACTTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSKHWAN*DNTWLF
Trigger: GAAGAGCCAAGTGTTATCTCAATTGGCCCAGTGTTT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTCCAGAGCCCCTCTCATaGCACTCACTTTCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: NESAHGSPSLLASLPQLFPEPLS*HSLSFN
Trigger: ATTAAAAGAAAGTGAGTGTCATGAGAGGGGCTCTGG...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAAGATTTGTGGCCATGTaGATCTCAAACTTCACATCA +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKRFVAM*ISNFTS
Trigger: TGATGTGAAGTTTGAGATTCACATGGCCACAAATCT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTATCTCACTACCTGTaGGGTAAGCAAAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLSHYL*GKQSDS
Trigger: TGAATCGCTTTGCTTACCGCACAGGTAGTGAGATAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATACTCTCAGCTTCCAATaGACTCTTTCCACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNTLSFQ*TLSTFQ
Trigger: CTGAAAAGTGGAAAGAGTGCATTGGAAGCTGAGAGT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCACTCTCAGCTTCCAATaGACTCTTTCCACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCTLSFQ*TLSTFQ
Trigger: CTGAAAAGTGGAAAGAGTGCATTGGAAGCTGAGAGT...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGATCCATCTGGATCTCTaGCTCTCCAAGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGIHLDL*LSKESV
Trigger: AACACTTTCCTTGGAGAGGCAGAGATCCAGATGGAT...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCATCCATCTGGATCTCTaGCTCTCCAAGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSIHLDL*LSKESV
Trigger: AACACTTTCCTTGGAGAGGCAGAGATCCAGATGGAT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCGGGATCCCAAGTTATaGCTTCCATTACAATTGCAA +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNRDPKL*LPLQLQ
Trigger: TTGCAATTGTAATGGAAGGCATAACTTGGGATCCCG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CGAGCTGACATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACCCTTGTGGAGCTCCATGAATTaGTTTACTTCCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: RADILFLCVSVNKFCSPLWSSMN*FTSHLE
Trigger: TTCCAAGTGGGAAGTAAAGCAATTCATGGAGCTCCA...CAAGGGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTGACAAGTATTGGTTTTaGGACTCAAACGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSDKYWF*DSNGPG
Trigger: GCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTC...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAATGTACCACATCTTCTaGGCGAAGATCTATCACAGA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSMYHIF*AKIYHR
Trigger: TCTGTGATAGATCTTCGCCCAGAAGATGTGGTACAT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCCACATTGAGGCCTaGGACGGATTTGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSIHIEA*DGFASV
Trigger: GACAGAAGCAAATCCGTCCCAGGCCTCAATGTGGAT...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCATGGACAACCAGACTCTaGGTTTGCTGCTCATACTTC +
Preference number: 4 (lower is better)
Translates to: PEGKRELPALKIVQVNESWTTRL*VCCSYF
Trigger: GAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCA...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTTCCAGGAATCCATCTaGATCTCTGCCTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSFQESI*ISASPR
Trigger: CCTTGGAGAGGCAGAGATCCAGATGGATTCCTGGAA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGAGTTTTACGTTTACTaGCCTTGTTCCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCEFYVY*PCSSWE
Trigger: TTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAACACTTGGCTCTTCTaGTTGACACAGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSNTWLF*LTQWDV
Trigger: TACATCCCACTGTGTCAACCAGAAGAGCCAAGTGTT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTCAGAGAAAAGAGATTTaGCCAGAACTGGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NESAHGSPSLLASLPQLFQRKEI*PELGVS
Trigger: ACTCACTCCCAGTTCTGGCCAAATCTCTTTTCTCTG...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 72 bp CAAACTTCACATCAATCCAGGAAAGGCAGATCACCTTaGTTCTCTTCACTGGGAGATCAGGATGTGAACAGA +
Preference number: 4 (lower is better)
Translates to: QTSHQSRKGRSP*FSSLGDQDVNR
Trigger: TCTGTTCACATCCTGATCTCCCAGTGAAGAGAACAAAGGTGATCTGCCTTTCCTGGATTGATGTGAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAACCAGTAACTCCGACATaGTTTACTCAACTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKPVTPT*FTQLFL
Trigger: AAGAAAAAGTTGAGTAAATCATGTCGGAGTTACTGG...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAGATTTAGTGTACTCTaGAGGCCTGAGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSRFSVL*RPEDFS
Trigger: AGAAAAATCCTCAGGCCTTCAGAGTACACTAAATCT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGTGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGCKGRQ*SSFLSS
Trigger: GCTTGATAAGAAACTGGATCATTGCCTCCCTTTACA...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACTGGGCATCCTCGTaGTTTAGTCAAAATACATTA +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNHWASS*FSQNTL
Trigger: TAATGTATTTTGACTAAATCACGAGGATGCCCAGTG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp GTCCTCTGGGCCAGGAGAGATTCTGGGATCTCATACTGTGAAGGGAAAGTAAAAATAGATATGCCATGGTaGCATGTGATGTCAAAAATG +
Preference number: 4 (lower is better)
Translates to: VLWARRDSGISYCEGKVKIDMPW*HVMSKM
Trigger: CATTTTTGACATCACATGTCACCATGGCATATCTAT...TTTTACTTTCCCTTCACAGTATGAGATCCCAGAATCTCTCCTGGCCCAGAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCAAAGTTCTCCTACCCTTaGGGTCTAGATACTTACCCT +
Preference number: 4 (lower is better)
Translates to: PEGKRELPALKIVQVNESKFSYP*GLDTYP
Trigger: AGGGTAAGTATCTAGACCTCAAGGGTAGGAGAACTT...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAACCAGACTCTGGGTTTaGTGCTCATACTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLTRLWV*CSYFRE
Trigger: TTCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTAGTTCCAGGCACATATaGTGTAGATCTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSSSRHI*CRSSSL
Trigger: GAGGCTGGAAGATCTACAGCATATGTGCCTGGAACT...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAAAGAAGAACAAGTCTaGATCACTCTAGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSKEEQV*ITLASI
Trigger: TATGCTGGCTAGAGTGATGCAGACTTGTTCTTCTTT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTGGTAGTAATCGGTCATaGGAGCTGACATTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFGSNRS*ELTFSS
Trigger: GGAAGAGAATGTCAGCTCGCATGACCGATTACTACC...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCCATCTTCTTCCATTCTaGAAAGAGGCCAGATTTATC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCHLLPF*KEARFI
Trigger: GATAAATCTGGCCTCTTTCCAGAATGGAAGAAGATG...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTTTCTACTTGAGATTTaGGAGCAGACATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IRFIHTVETTVAALNPVCFLLEI*EQTSSS
Trigger: GGAAGAAGATGTCTGCTCCCAAATCTCAAGTAGAAA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGG +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSLLASF*RCNFTR
Trigger: CCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAG...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTGGACAACCAGACTCTaGGTTTGCTGCTCATACTTC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSWTTRL*VCCSYF
Trigger: GAAGTATGAGCAGCAAACCCAGAGTCTGGTTGTCCA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATTCTGGTTGACACAGTaGGATGTAGACCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLFWLTQ*DVDHAL
Trigger: CAGAGCATGGTCTACATCCCACTGTGTCAACCAGAA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGAGATTTAGTGTACTCTaGAGGCCTGAGGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGRFSVL*RPEDFS
Trigger: AGAAAAATCCTCAGGCCTTCAGAGTACACTAAATCT...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCTATGATGAAGAAATCTaGTCTTGCTCACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCYDEEI*SCSLHS
Trigger: GCTATGAAGTGAGCAAGATCAGATTTCTTCATCATA...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCTTTTTCTTAAGTGGATaGGATAACACTGGATTGTCC +
Preference number: 4 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCFFLSG*DNTGLS
Trigger: GGACAATCCAGTGTTATCTCATCCACTTAAGAAAAA...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAACCTCCAGGTACCATTaGTTTCCTGTATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPTSRYH*FPVCGS
Trigger: ACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAATCCATCTGGATCTCTaGCTCTCCAAGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLIHLDL*LSKESV
Trigger: AACACTTTCCTTGGAGAGGCAGAGATCCAGATGGAT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATACTGTCGCATCTTCTaGCACAGGCTCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPYCRIF*HRLTSS
Trigger: GGAAGAAGTGAGCCTGTGGCAGAAGATGCGACAGTA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAAGGGATTTCCTCTCTaGTATACACTCCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLKGFPL*YTLLPH
Trigger: GTGTGGAAGGAGTGTATAGCAGAGAGGAAATCCCTT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGCCTTCCATTACAATTaGAATCCACACCAAATCAAT +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNAFHYN*NPHQIN
Trigger: ATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTTTTCTACTTGAGATTTaGGAGCAGACATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NESAHGSPSLLASLPQLFFLLEI*EQTSSS
Trigger: GGAAGAAGATGTCTGCTCCCAAATCTCAAGTAGAAA...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATGGCACTCCTTCACATaGACAACCAGACTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPWHSFT*TTRLWV
Trigger: AACCCAGAGTCTGGTTGTCCATGTGAAGGAGTGCCA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAGTAAGTCTTCACATATaGGTTAGAGCGCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLVSLHI*VRALLG
Trigger: GCCAAGAAGCGCTCTAACCCATATGTGAAGACTTAC...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTTCCACACACAACTTTaGGTAGAAACGCTTATGAGA +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSFHTQL*VETLMR
Trigger: TCTCATAAGCGTTTCTACCCAAAGTTGTGTGTGGAA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTGCAGTTAAGTCCATCTaGGGAATGTGTTATATACAC +
Preference number: 4 (lower is better)
Translates to: NESAHGSPSLLASLPQLFAVKSI*GMCYIH
Trigger: GTGTATATAACACATTCCCCAGATGGACTTAACTGC...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCAGATACACCCAGATTCTaGAAGGTTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: PEGKRELPALKIVQVNESDTPRF*KVRRQS
Trigger: ACTTTGTCTCCTAACCTTCCAGAATCTGGGTGTATC...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp AGAGGCTACTGCAGACAATTCTACCTCAGATCCAAACTGCAGGAGTTGTTAAAGCAAGAGCATAGCAATTaGAGCTCCATGAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: RGYCRQFYLRSKLQELLKQEHSN*SSMNCF
Trigger: AAAGCAATTCATGGAGCTCCAATTGCTATGCTCTTG...CTTTAACAACTCCTGCAGTTTGGATCTGAGGTAGAATTGTCTGCAGTAGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
3UTR CAA 72 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATaGCAATCCACACCAAATCAATCTTTGAAAACATTC +
Preference number: 4 (lower is better)
Translates to: TARDPKLCLPLQ*QSTPNQSLKTF
Trigger: GAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCCCAGTAACTCCGACATaGTTTACTCAACTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NQLAADSVERDFLSAIHSPVTPT*FTQLFL
Trigger: AAGAAAAAGTTGAGTAAATCATGTCGGAGTTACTGG...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLCKGRQ*SSFLSS
Trigger: GCTTGATAAGAAACTGGATCATTGCCTCCCTTTACA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSCKGRQ*SSFLSS
Trigger: GCTTGATAAGAAACTGGATCATTGCCTCCCTTTACA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTTGGGATGTATTTCAATaGAACCACCAACTCGCCTTT +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSWDVFQ*NHQLAF
Trigger: AAAGGCGAGTTGGTGGTTTCATTGAAATACATCCCA...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTAATCCTTTTCTCATCTaGTTTCCGGACCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSNPFLI*FPDLFI
Trigger: GATGAAGAGGTCCGGAAAGCAGATGAGAAAAGGATT...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATGTACCACATCTTCTaGGCGAAGATCTATCACAGA +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSMYHIF*AKIYHR
Trigger: TCTGTGATAGATCTTCGCCCAGAAGATGTGGTACAT...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCACTCCAACAGGGGTTTTaGAGGCTGGGATGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPLQQGF*RLGCIS
Trigger: TGAAATACATCCCAGCCTCCAAAACCCCTGTTGGAG...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAGAGTTTTACGTTTACTaGCCTTGTTCCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLEFYVY*PCSSWE
Trigger: TTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTC...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTACACTGGGCATCCTCGTaGTTTAGTCAAAATACATTA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLHWASS*FSQNTL
Trigger: TAATGTATTTTGACTAAATCACGAGGATGCCCAGTG...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTTCAAAATTGTTCAGGTaGATGAATCAGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFSKLFR*MNQLMA
Trigger: AGCCATGAGCTGATTCATTCACCTGAACAATTTTGA...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAAAGGGATTTCCTCTCTaGTATACACTCCTTCCACAC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPKGFPL*YTLLPH
Trigger: GTGTGGAAGGAGTGTATAGCAGAGAGGAAATCCCTT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCATGTAACTTCACTAGGTaGTCAATGTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEGKRELPALKIVQVNESCNFTR*SMSSSS
Trigger: AGAAGAAGAAGACATTGACCACCTAGTGAAGTTACA...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATTGCCTTAATTATCTGTaGGTTTCTCTTATCCACCTT +
Preference number: 4 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHCLNYL*VSLIHL
Trigger: AAGGTGGATAAGAGAAACCCACAGATAATTAAGGCA...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR TCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAATAGAAAGGTCAGTTTaGTCAATGAGTACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLIERSV*SMSTRR
Trigger: TCTTCTGGTACTCATTGATCAAACTGACCTTTCTAT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATTATCTCACTACCTGTaGGGTAAGCAAAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPLSHYL*GKQSDS
Trigger: TGAATCGCTTTGCTTACCGCACAGGTAGTGAGATAA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR GCA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTGCCTTCCATTACAATTaGAATCCACACCAAATCAAT +
Preference number: 4 (lower is better)
Translates to: YISSFIREMRSSLSNDCSAFHYN*NPHQIN
Trigger: ATTGATTTGGTGTGGATTGCAATTGTAATGGAAGGC...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATGTAACTTCACTAGGTaGTCAATGTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SFIREMRSSLSNDCSISLCNFTR*SMSSSS
Trigger: AGAAGAAGAAGACATTGACCACCTAGTGAAGTTACA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCAGTTGAGAATTTGGAATaGGCTATGATGAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: PEGKRELPALKIVQVNESVENLE*AMMKKS
Trigger: AGATTTCTTCATCATAGCCCATTCCAAATTCTCAAC...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATTTCTACTTGAGATTTaGGAGCAGACATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPFLLEI*EQTSSS
Trigger: GGAAGAAGATGTCTGCTCCCAAATCTCAAGTAGAAA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 72 bp TTGGGTAGAAACGCTTATGAGAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAGATGAAACTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGRNAYENRKVS*INEYQKMKLSS
Trigger: TGAGCTAAGTTTCATCTTCTGGTACTCATTGATCAAACTGACCTTTCTATTCTCATAAGCGTTTCTACCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR TCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCACCAGTAACTCCGACATaGTTTACTCAACTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPPVTPT*FTQLFL
Trigger: AAGAAAAAGTTGAGTAAATCATGTCGGAGTTACTGG...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CCA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAACACTAAGACAGATGTaGTACATGAGGATGAATATA +
Preference number: 4 (lower is better)
Translates to: PSITIAIHTKSIFENIPPTLRQM*YMRMNI
Trigger: TATATTCATCCTCATGTACCACATCTGTCTTAGTGT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
3UTR CAA 72 bp CTTCCATTACAATTGCAATCCACACCAAATCAATCTTaGAAAACATTCCTCCATTCGGTTCATACATACAGT +
Preference number: 4 (lower is better)
Translates to: LPLQLQSTPNQS*KTFLHSVHTYS
Trigger: ACTGTATGTATGAACCGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS GCA 90 bp GCCTGTCACTTGCAACAGGTGCCTCCAGAGATCGAGAAGTCCCAGTaGCGGTTTCAAGGGAGGGTCTCCGGCTCCGGGAAGATCGCAACC +
Preference number: 5 (lower is better)
Translates to: ACHLQQVPPEIEKSQ*RFQGRVSGSGKIAT
Trigger: GGTTGCGATCTTCCCGGAGCCGGAGACCCTCCCTTGAAACCGGCACTGGGACTTCTCGATCTCTGGAGGCACCTGTTGCAAGTGACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263033.9
ENST00000372981.1
CDS GCA 90 bp CGCTGTCACTTGCAACAGGTGCCTCCAGAGATCGAGAAGTCCCAGTaGCGGTTTCAAGGGAGGGTCTCCGGCTCCGGGAAGATCGCAACC +
Preference number: 5 (lower is better)
Translates to: RCHLQQVPPEIEKSQ*RFQGRVSGSGKIAT
Trigger: GGTTGCGATCTTCCCGGAGCCGGAGACCCTCCCTTGAAACCGGCACTGGGACTTCTCGATCTCTGGAGGCACCTGTTGCAAGTGACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491326.1
CDS CCA 90 bp TGCGGCAGTCCCGACACACCAGGTGATTACAACCCCGACAAGTATTaGTTTTGGGACTCAAACGGCCCAGGCTCTCCTGGCACCGGGCAC +
Preference number: 5 (lower is better)
Translates to: CGSPDTPGDYNPDKY*FWDSNGPGSPGTGH
Trigger: GTGCCCGGTGCCAGGAGAGCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGACTGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 90 bp GGGCTGGACCTGCAGAAGAGGACAGGGACTCATAAACCCAGCTTCTaGTTGGCCATTGAGGAACGGAGCTGCAGAGTCCCTTCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: GLDLQKRTGTHKPSF*LAIEERSCRVPSAQ
Trigger: TTGGGCAGAAGGGACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATGAGTCCCTGTCCTCTTCTGCAGGTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
ENST00000491602.1
CDS-3UTR CAA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACACCGATCACTGTAGTGTaGGCTGCCCCTCTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTPITVV*AAPLGP
Trigger: GGGGCCAAGAGGGGCAGCCAACACTACAGTGATCGG...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS GCA 90 bp GGCTCTCCTGGCACCGGGCACAGGTCCGATCACTGTAGTGTTGGCTaGCCCTCTTGGCCCCTTTCCTTTTTATCTCCAGTAACTCATTCT +
Preference number: 5 (lower is better)
Translates to: GSPGTGHRSDHCSVG*PSWPLSFLSPVTHS
Trigger: AGAATGAGTTACTGGAGATAAAAAGGAAAGGGGCCAAGAGGGGCAGCCAACACTACAGTGATCGGACCTGTGCCCGGTGCCAGGAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 90 bp CCTTGGCGCACACCTTGCACCTCCAGGTACCATTGCTTTCCTGTATaGGGCAGTCCCGACACACCAGGTGATTACAACCCCGACAAGTAT +
Preference number: 5 (lower is better)
Translates to: PWRTPCTSRYHCFPV*GSPDTPGDYNPDKY
Trigger: ATACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS-3UTR CAA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACATCCTTGGCGCACACCTaGCACCTCCAGGTACCATTG +
Preference number: 5 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTSLAHT*HLQVPL
Trigger: CAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGA...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAGGAGAGCTACCAGAGTaGCCTGTGGCTGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPGELPE*PVADWP
Trigger: TGGCCAGTCAGCCACAGGCAACTCTGGTAGCTCTCC...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276141.10
CDS TCA 90 bp CAGGTACCATTGCTTTCCTGTATGCGGCAGTCCCGACACACCAGGTaGTTACAACCCCGACAAGTATTGGTTTTGGGACTCAAACGGCCC +
Preference number: 5 (lower is better)
Translates to: QVPLLSCMRQSRHTR*LQPRQVLVLGLKRP
Trigger: GGGCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS-3UTR CAA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCCGATCACTGTAGTGTaGGCTGCCCCTCTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNPITVV*AAPLGP
Trigger: GGGGCCAAGAGGGGCAGCCAACACTACAGTGATCGG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATCCTTGGCGCACACCTaGCACCTCCAGGTACCATTG +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKSLAHT*HLQVPL
Trigger: CAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAACCACCAACTCGCCTTaGTGTGATGGCAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPTTNSP*CDGKPV
Trigger: GACTGGCTTGCCATCACACAAAGGCGAGTTGGTGGT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAAACCCAGCTTCTGCTaGGCCATTGAGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPKPSFC*AIEERS
Trigger: GCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS GCA 90 bp TCAACTCTATTTCCTTGGCGCACACCTTGCACCTCCAGGTACCATTaGTTTCCTGTATGCGGCAGTCCCGACACACCAGGTGATTACAAC +
Preference number: 5 (lower is better)
Translates to: STLFPWRTPCTSRYH*FPVCGSPDTPGDYN
Trigger: GTTGTAATCACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 90 bp GAGTTTTACGTTTACTGGCCTTGTTCCTCATGGGAAGGAGGTATCTaGCAGAGGGCGGGGAGTAATCAACAGCCTACTCAAAGCGGACAG +
Preference number: 5 (lower is better)
Translates to: EFYVYWPCSSWEGGI*QRAGSNQQPTQSGQ
Trigger: CTGTCCGCTTTGAGTAGGCTGTTGATTACTCCCCGCCCTCTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS CCA 90 bp AGTGAGGATTCAGGGTCTTCTTCATCACAGGAGTTTTACGTTTACTaGCCTTGTTCCTCATGGGAAGGAGGTATCTGGCAGAGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SEDSGSSSSQEFYVY*PCSSWEGGIWQRAG
Trigger: CCCCGCCCTCTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGACCCTGAATCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATTACTCACTGCAGGTTaGTGGCGCAGGGACATCCTG +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKLLTAG*WRRDIL
Trigger: CAGGATGTCCCTGCGCCACAAACCTGCAGTGAGTAA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TATGCCATACTGCTACACTGTGGCCCGAGGTGCCATCTCCAAAGTAATATTTCCAGGCCTGGGACGGATTaGCTTCTGTCTCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: YAILLHCGPRCHLQSNISRPGTD*LLSPKE
Trigger: CTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCCT...GGAAATATTACTTTGGAGATGGCACCTCGGGCCACAGTGTAGCAGTATGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAGCAGCCGTCAAGTTCTaGGCTTCTTTGATCCACACC +
Preference number: 5 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKAAVKF*ASLIHT
Trigger: GGTGTGGATCAAAGAAGCCAAGAACTTGACGGCTGC...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAGAAGTCCCTCCTGCTTaGGCAGCCGTCAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKEVPPA*AAVKFL
Trigger: CAAGAACTTGACGGCTGCCAAAGCAGGAGGGACTTC...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp GCTGCCGATCGTACTCTGAAGATAAAGCACCCACGAACATCTGGGGAAGGCACATGTCACCTGGTCATGTaGCAGAGGAATAGCTACAGC +
Preference number: 5 (lower is better)
Translates to: AADRTLKIKHPRTSGEGTCHLVM*QRNSYS
Trigger: GCTGTAGCTATTCCTCTGCAACATGACCAGGTGACA...TGTGCCTTCCCCAGATGTTCGTGGGTGCTTTATCTTCAGAGTACGATCGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS GCA 90 bp TCATCATGCTGCCGATCGTACTCATGGAGGAGCCACTTTGCATGCTaGTTCTGGCTAGCTTCTGGCGATGTAACTTCACTAGGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: SSCCRSYSWRSHFAC*FWLASGDVTSLGGQ
Trigger: TTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CCA 90 bp TGCTGCCGATCGTACTCATGGAGGAGCCACTTTGCATGCTGCTTCTaGCTAGCTTCTGGCGATGTAACTTCACTAGGTGGTCAATGTCTT +
Preference number: 5 (lower is better)
Translates to: CCRSYSWRSHFACCF*LASGDVTSLGGQCL
Trigger: AAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGCTTCTGCTTGGCCATaGAGGAACGGAGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCASAWP*RNGAAE
Trigger: CTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAGC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS TCA 90 bp TTGGCACTTCAAATAGCACACTGGGCTCCTTCTGCCGCTCCTGAATaGTCTTTCTTCCTGGCCAGATGTCACCCATCTGTGTCTGATGAA +
Preference number: 5 (lower is better)
Translates to: LALQIAHWAPSAAPE*SFFLARCHPSVSDE
Trigger: TTCATCAGACACAGATGGGTGACATCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGAAGGAGCCCAGTGTGCTATTTGAAGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 90 bp TGCCAGTCACAAAGATGTTCCCGAAATCACCAGCTTCACTGTAGATaGTCATCATGCTGCCGATCGTACTCATGGAGGAGCCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: CQSQRCSRNHQLHCR*SSCCRSYSWRSHFA
Trigger: TGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGAACATCTTTGTGACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CCA 90 bp TCTTCTTCATCACAGGAGTTTTACGTTTACTGGCCTTGTTCCTCATaGGAAGGAGGTATCTGGCAGAGGGCGGGGAGTAATCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: SSSSQEFYVYWPCSS*EGGIWQRAGSNQQP
Trigger: AGGCTGTTGATTACTCCCCGCCCTCTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS-3UTR CAA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCGGAGAGCTACCAGAGTaGCCTGTCACTTGCAACAGG +
Preference number: 5 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCGELPE*PVTCNR
Trigger: CCTGTTGCAAGTGACAGGCAACTCTGGTAGCTCTCC...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTACCGATCACTGTAGTGTaGGCTGCCCCTCTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLPITVV*AAPLGP
Trigger: GGGGCCAAGAGGGGCAGCCAACACTACAGTGATCGG...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACACCTCCAGGTACCATaGCTTTCCTGTATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSHLQVP*LSCMRQ
Trigger: CTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CGAGCTGACATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACCCTTGCACCTCCAGGTACCATaGCTTTCCTGTATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RADILFLCVSVNKFCSPLHLQVP*LSCMRQ
Trigger: CTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTG...CAAGGGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCCACCTCCAGGTACCATaGCTTTCCTGTATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCHLQVP*LSCMRQ
Trigger: CTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTG...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTCCTTGGCGCACACCTaGCACCTCCAGGTACCATTG +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSSLAHT*HLQVPL
Trigger: CAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAATTCAACTCTATTTCCTaGGCGCACACCTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKFNSIS*AHTLHL
Trigger: GAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGAA...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTACTCACTGCAGGTTaGTGGCGCAGGGACATCCTG +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLLTAG*WRRDIL
Trigger: CAGGATGTCCCTGCGCCACAAACCTGCAGTGAGTAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCGGGGTCTGGTCTCTGGTCTCAGAGCATCAGTCAGGTTCCAGAAGCACTCACGTTAATAGTGTCCCGCTaGATGCTGGTTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PGSGLWSQSISQVPEALTLIVSR*MLVFLF
Trigger: AAAAAGAAAAACCAGCATCAAGCGGGACACTATTAA...CGTGAGTGCTTCTGGAACCTGACTGATGCTCTGAGACCAGAGACCAGACCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAAGTTCTTGGCTTCTTaGATCCACACCTGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPKFLAS*IHTWSS
Trigger: AGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAAACCCAGCTTCTGCTaGGCCATTGAGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSKPSFC*AIEERS
Trigger: GCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAACTTGGCTCTTCTGGTaGACACAGTGGGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKTWLFW*TQWDVD
Trigger: GTCTACATCCCACTGTGTCAACCAGAAGAGCCAAGT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCACTTCTCTCCTCTCCTTaGAAACTAGACAACACGCCT +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPLLSSP*KLDNTP
Trigger: AGGCGTGTTGTCTAGTTTCAAAGGAGAGGAGAGAAG...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372989.5
CDS-3UTR CAA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCGACAAGTATTGGTTTaGGGACTCAAACGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNRQVLV*GLKRPR
Trigger: CCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTCG...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGTTACTCACTGCAGGTTaGTGGCGCAGGGACATCCTG +
Preference number: 5 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGLLTAG*WRRDIL
Trigger: CAGGATGTCCCTGCGCCACAAACCTGCAGTGAGTAA...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCACCACCAACTCGCCTTaGTGTGATGGCAAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSTTNSP*CDGKPV
Trigger: GACTGGCTTGCCATCACACAAAGGCGAGTTGGTGGT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACCTCCAACAGGGGTTTaGGAGGCTGGGATGTATTTC +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSPPTGV*EAGMYF
Trigger: GAAATACATCCCAGCCTCCAAAACCCCTGTTGGAGG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGGAGAGCTACCAGAGTaGCCTGTAATCCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCGELPE*PVIPAL
Trigger: AAGTGCTGGGATTACAGGCAACTCTGGTAGCTCTCC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372989.5
CDS-3UTR CAA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTACTCCCCCGCCCGCATaGCTCACATCTTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFTPPPA*LTSSLM
Trigger: CATGAGGGAAGATGTGAGCAATGCGGGCGGGGGAGT...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GAGCATCAGTCAGGTTCCAGAAGCACTCACGGGTTAGAGCGCTTCTTGGCTTCATTAGACATGCCATTCTaGCTTTTTCCCAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: EHQSGSRSTHGLERFLASLDMPF*LFPNPG
Trigger: ACCAGGATTGGGAAAAAGCAAGAATGGCATGTCTAA...TGAAGCCAAGAAGCGCTCTAACCCGTGAGTGCTTCTGGAACCTGACTGATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS TCA 90 bp CTGTCTCTCTTTTACTCACTGCAGGTTTGTGGCGCAGGGACATCCTaGTTATCTCACTACCTGTGCGGTAAGCAAAGCGATTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: LSLFYSLQVCGAGTS*LSHYLCGKQSDSLS
Trigger: AGAAAGTGAATCGCTTTGCTTACCGCACAGGTAGTGAGATAATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAGTAAAAGAGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 90 bp CCTGTAACCACAGATCTAATAGAACTTACCATGGAGGAGCCACTTTaGATGCTGCTTCTGGCTAGCTTCTGGCGATGTAACTTCACTAGG +
Preference number: 5 (lower is better)
Translates to: PVTTDLIELTMEEPL*MLLLASFWRCNFTR
Trigger: CCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGGTAAGTTCTATTAGATCTGTGGTTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS CCA 90 bp GTACTCATGGAGGAGCCACTTTGCATGCTGCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGGTGGTCAATGTCTTCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VLMEEPLCMLLLASF*RCNFTRWSMSSSSS
Trigger: AGAAGAAGAAGAAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CCA 90 bp CTTACCATGGAGGAGCCACTTTGCATGCTGCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGGTGGTCAATGTCTTCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LTMEEPLCMLLLASF*RCNFTRWSMSSSSS
Trigger: AGAAGAAGAAGAAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCACAACCCCGACAAGTATaGGTTTTGGGACTCAAACGG +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSQPRQV*VLGLKR
Trigger: CCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTG...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTCTTCCATATCCACATaGAGGCCTGGGACGGATTTG +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCSSIST*RPGTDL
Trigger: CAAATCCGTCCCAGGCCTCAATGTGGATATGGAAGA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAAACCAGACTCTGGGTTaGCTGCTCATACTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSNQTLG*LLILQG
Trigger: TCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTT...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGGTTTTTCTTTTTCCTaGGCGGGACTTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSGFSFS*AGLVRQ
Trigger: CTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGGTTTTTCTTTTTCCTaGGCGGGACTTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCGFSFS*AGLVRQ
Trigger: CTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCGCAGCCGTCAAGTTCTaGGCTTCTTTGATCCACACC +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSAAVKF*ASLIHT
Trigger: GGTGTGGATCAAAGAAGCCAAGAACTTGACGGCTGC...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCAGGAAGGAGGTATCCCTaGACAAAGCTGTCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSGRRYP*TKLSEV
Trigger: GACTTCAGACAGCTTTGTCAAGGGATACCTCCTTCC...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTACGTTTACTGGCCTaGTTCCTCATGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSLRLLA*FLMGRR
Trigger: CCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TACACCTCCCTGCTCCCCCAGAAACAGATAAGCTCTGTTCAAGAGTGCCCGGACCTGATAATCAAGAAGTaGCTGAATAAGTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: YTSLLPQKQISSVQECPDLIIKK*LNKSSV
Trigger: AACAGAGGACTTATTCAGCAACTTCTTGATTATCAG...GTCCGGGCACTCTTGAACAGAGCTTATCTGTTTCTGGGGGAGCAGGGAGGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS CCA 90 bp AATGTCTTCTTCTTCTTCTTCCTCTTCCATATCCACATTGAGGCCTaGGACGGATTTGCTTCTGTCTCCCAAGGAGCCACTTTCATGTAC +
Preference number: 5 (lower is better)
Translates to: NVFFFFFLFHIHIEA*DGFASVSQGATFMY
Trigger: GTACATGAAAGTGGCTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCCTCAATGTGGATATGGAAGAGGAAGAAGAAGAAGAAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCCAACCCCGACAAGTATaGGTTTTGGGACTCAAACGG +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSQPRQV*VLGLKR
Trigger: CCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTG...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGTTCAACTCTATTTCCTaGGCGCACACCTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGFNSIS*AHTLHL
Trigger: GAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGAA...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GGGTGGGAAACAAAAGAGCAAGTTACAGCCCGGGATCCCAAGTTATGCCTTCCAAAAACCAGTCCCCAGTaGCTTTCTTCAACTCTATTT +
Preference number: 5 (lower is better)
Translates to: GWETKEQVTARDPKLCLPKTSPQ*LSSTLF
Trigger: AAATAGAGTTGAAGAAAGCAACTGGGGACTGGTTTT...TGGAAGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp GGAGACTCTGTCTACATTCCCTTAGAGCCCTTAACAGTCCCCAGCCTGGAGAAAAGTTTCCTTTTCTACTaGAGATTTGGGAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: GDSVYIPLEPLTVPSLEKSFLFY*RFGSRH
Trigger: ATGTCTGCTCCCAAATCTCAAGTAGAAAAGGAAACT...TTTCTCCAGGCTGGGGACTGTTAAGGGCTCTAAGGGAATGTAGACAGAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCTCTTCCATATCCACATaGAGGCCTGGGACGGATTTG +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSSSIST*RPGTDL
Trigger: CAAATCCGTCCCAGGCCTCAATGTGGATATGGAAGA...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTCAGATCCAAACTGCAGGAGTTGTTAAAGCAGACTACCTTTCCATGTAAAGGGTCTTCCATATCCACATaGAGGCCTGGGACGGATTTG +
Preference number: 5 (lower is better)
Translates to: LRSKLQELLKQTTFPCKGSSIST*RPGTDL
Trigger: CAAATCCGTCCCAGGCCTCAATGTGGATATGGAAGA...CCCTTTACATGGAAAGGTAGTCTGCTTTAACAACTCCTGCAGTTTGGATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAGAAGTCCCTCCTGCTTaGGCAGCCGTCAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLEVPPA*AAVKFL
Trigger: CAAGAACTTGACGGCTGCCAAAGCAGGAGGGACTTC...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CGAGCTGACATTCTCTTCCTGTGTGTGAGTGTGAACAAATTCTGTTCACCCTTGCAAGTTCTCCTACCCTaGAGGTCTAGATACTTACCC +
Preference number: 5 (lower is better)
Translates to: RADILFLCVSVNKFCSPLQVLLP*RSRYLP
Trigger: GGGTAAGTATCTAGACCTCAAGGGTAGGAGAACTTG...CAAGGGTGAACAGAATTTGTTCACACTCACACACAGGAAGAGAATGTCAGCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS CCA 90 bp TTCCTTTTCTACTTGAGATTTGGGAGCAGACATCTTCTTCCATTCTaGAAAGAGGCCAGATTTATCCAGAGAGTCTCTCCTGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FLFYLRFGSRHLLPF*KEARFIQRVSPGGA
Trigger: AGCACCTCCAGGAGAGACTCTCTGGATAAATCTGGCCTCTTTCCAGAATGGAAGAAGATGTCTGCTCCCAAATCTCAAGTAGAAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 90 bp TGCATGCTGCTTCTGGCTAGCTTCTGGCGATGTAACTTCACTAGGTaGTCAATGTCTTCTTCTTCTTCTTCCTCTTCCATATCCACATTG +
Preference number: 5 (lower is better)
Translates to: CMLLLASFWRCNFTR*SMSSSSSSSSISTL
Trigger: CAATGTGGATATGGAAGAGGAAGAAGAAGAAGAAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCCACAAATACCACATTTaGACCTCCAGGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCHKYHI*TSRLSF
Trigger: GAAACTCAGCCTGGAGGTCAAAATGTGGTATTTGTG...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAAGGCCTGGGACGGATTaGCTTCTGTCTCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSITIAIHTKSIFENIPPRPGTD*LLSPKE
Trigger: CTCCTTGGGAGACAGAAGCAAATCCGTCCCAGGCCT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCAGAGGGTAAGAGAGAACTACCAGCACTCAAAATTGTTCAGGTGAATGAATCAAACCAGACTCTGGGTTaGCTGCTCATACTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PEGKRELPALKIVQVNESNQTLG*LLILQG
Trigger: TCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTT...TGATTCATTCACCTGAACAATTTTGAGTGCTGGTAGTTCTCTCTTACCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTACCTCCAACAGGGGTTTaGGAGGCTGGGATGTATTTC +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLPPTGV*EAGMYF
Trigger: GAAATACATCCCAGCCTCCAAAACCCCTGTTGGAGG...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AATGAATCAGCTCATGGCTCACCTAGCCTCTTAGCTTCTCTTCCTCAACTCTTTTGTTCCCTGAGCACTTaGAGTTTCCTCACTCAAAGC +
Preference number: 5 (lower is better)
Translates to: NESAHGSPSLLASLPQLFCSLST*SFLTQS
Trigger: GCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA...AAAGAGTTGAGGAAGAGAAGCTAAGAGGCTAGGTGAGCCATGAGCTGATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTCAACCCCGACAAGTATaGGTTTTGGGACTCAAACGG +
Preference number: 5 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFQPRQV*VLGLKR
Trigger: CCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTG...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATTCAACTCTATTTCCTaGGCGCACACCTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLFNSIS*AHTLHL
Trigger: GAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGAA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTTCCACTTTTCAGCTTaGGCACTTCAAATAGCACAC +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCFHFSA*ALQIAH
Trigger: GTGTGCTATTTGAAGTGCCAAAGCTGAAAAGTGGAA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATCATTCCACTTTTCAGCTTaGGCACTTCAAATAGCACAC +
Preference number: 5 (lower is better)
Translates to: SPGSQVMPSITIAIHTKSFHFSA*ALQIAH
Trigger: GTGTGCTATTTGAAGTGCCAAAGCTGAAAAGTGGAA...TGATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAACCAGACTCTGGGTTaGCTGCTCATACTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLNQTLG*LLILQG
Trigger: TCCCTGAAGTATGAGCAGCAAACCCAGAGTCTGGTT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TGTTCCCTGAGCACTTTGAGTTTCCTCACTCAAAGCCTCAACTTAACTCATTTTGGTTTTTCTTTTTCCTaGGCGGGACTTGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CSLSTLSFLTQSLNLTHFGFSFS*AGLVRQ
Trigger: CTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACC...AAAATGAGTTAAGTTGAGGCTTTGAGTGAGGAAACTCAAAGTGCTCAGGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAGGAAGGAGGTATCCCTaGACAAAGCTGTCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLGRRYP*TKLSEV
Trigger: GACTTCAGACAGCTTTGTCAAGGGATACCTCCTTCC...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATTACGTTTACTGGCCTaGTTCCTCATGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLLRLLA*FLMGRR
Trigger: CCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAACTTGGCTCTTCTGGTaGACACAGTGGGATGTAGAC +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLTWLFW*TQWDVD
Trigger: GTCTACATCCCACTGTGTCAACCAGAAGAGCCAAGT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTAACCAACCCTGCTTCCCAGAGCCTTAAAACCCAGACTGGTCCTAATGCGAAAACACCAAATCAATCTTaGAAAACATTCCTCCATTCG +
Preference number: 5 (lower is better)
Translates to: LTNPASQSLKTQTGPNAKTPNQS*KTFLHS
Trigger: CGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGT...TTTCGCATTAGGACCAGTCTGGGTTTTAAGGCTCTGGGAAGCAGGGTTGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGTTGGAGCTCCATGAATaGCTTTACTTCCCACTTGGA +
Preference number: 5 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGLELHE*LYFPLG
Trigger: TCCAAGTGGGAAGTAAAGCAATTCATGGAGCTCCAA...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGTTCCACTTTTCAGCTTaGGCACTTCAAATAGCACAC +
Preference number: 5 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGFHFSA*ALQIAH
Trigger: GTGTGCTATTTGAAGTGCCAAAGCTGAAAAGTGGAA...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp GCAAAAGGGTACAGATTAGGATATACACAGAAGGTTAGCTCGGAGAAGAGGTGCAGTTTCCTTTTCTACTaGAGATTTGGGAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: AKGYRLGYTQKVSSEKRCSFLFY*RFGSRH
Trigger: ATGTCTGCTCCCAAATCTCAAGTAGAAAAGGAAACT...GCACCTCTTCTCCGAGCTAACCTTCTGTGTATATCCTAATCTGTACCCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp AGAAAACTAAATATTCCTTCTACCTCAGTCTCCATTCCTAGAGGCAGCCACCATCACAAATACCACATTTaGACCTCCAGGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: RKLNIPSTSVSIPRGSHHHKYHI*TSRLSF
Trigger: GAAACTCAGCCTGGAGGTCAAAATGTGGTATTTGTG...ATGGTGGCTGCCTCTAGGAATGGAGACTGAGGTAGAAGGAATATTTAGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCTGCCTTCCATTACAATaGCAATCCACACCAAATCAA +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCCLPLQ*QSTPNQ
Trigger: TTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCA...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp AATCAGTTAGCAGCTGACTCTGTTGAAAGGGATTTCCTCTCTGCTATACACTCCAAAACCAGTCCCCAGTaGCTTTCTTCAACTCTATTT +
Preference number: 5 (lower is better)
Translates to: NQLAADSVERDFLSAIHSKTSPQ*LSSTLF
Trigger: AAATAGAGTTGAAGAAAGCAACTGGGGACTGGTTTT...GGAGTGTATAGCAGAGAGGAAATCCCTTTCAACAGAGTCAGCTGCTAACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CTTGATAGACAAATGCCTCTGAAATTGCTGTCAAACTCAGAAACACCAGCAGGGAAAACCAGTCCCCAGTaGCTTTCTTCAACTCTATTT +
Preference number: 5 (lower is better)
Translates to: LDRQMPLKLLSNSETPAGKTSPQ*LSSTLF
Trigger: AAATAGAGTTGAAGAAAGCAACTGGGGACTGGTTTT...CCCTGCTGGTGTTTCTGAGTTTGACAGCAATTTCAGAGGCATTTGTCTATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372981.1
CDS-3UTR CAA 90 bp TATATCTCATCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTCACAAATACCACATTTaGACCTCCAGGCTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: YISSFIREMRSSLSNDCSHKYHI*TSRLSF
Trigger: GAAACTCAGCCTGGAGGTCAAAATGTGGTATTTGTG...ACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGATGAGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATGCAGAAAATACATGTTaGTACACATACACACACACA +
Preference number: 5 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNAENTC*YTYTHT
Trigger: TGTGTGTGTGTATGTGTACAAACATGTATTTTCTGC...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ATTCGGTTCATACATACAGTAGAAACCACTGTGGCTGCCCTTAATCCAGTGTGCGCAGAAAATACATGTTaGTACACATACACACACACA +
Preference number: 5 (lower is better)
Translates to: IRFIHTVETTVAALNPVCAENTC*YTYTHT
Trigger: TGTGTGTGTGTATGTGTACAAACATGTATTTTCTGC...GCACACTGGATTAAGGGCAGCCACAGTGGTTTCTACTGTATGTATGAACCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNNRKVS*INEYQK
Trigger: CTTCTGGTACTCATTGATCAAACTGACCTTTCTATT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp ACAGCCCGGGATCCCAAGTTATGCCTTCCATTACAATTGCAATCCACACCAAATACACCAAATCAATCTTaGAAAACATTCCTCCATTCG +
Preference number: 5 (lower is better)
Translates to: TARDPKLCLPLQLQSTPNTPNQS*KTFLHS
Trigger: CGAATGGAGGAATGTTTTCAAAGATTGATTTGGTGT...ATTTGGTGTGGATTGCAATTGTAATGGAAGGCATAACTTGGGATCCCGGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAAAGTTCTTGGCTTCTTaGATCCACACCTGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PSITIAIHTKSIFENIPPKFLAS*IHTWSS
Trigger: AGAGCTCCAGGTGTGGATCAAAGAAGCCAAGAACTT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAGTTTCCTTTTCTACTaGAGATTTGGGAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLSFLFY*RFGSRH
Trigger: ATGTCTGCTCCCAAATCTCAAGTAGAAAAGGAAACT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTATTAATAGTGTCCCGCTaGATGCTGGTTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLLIVSR*MLVFLF
Trigger: AAAAAGAAAAACCAGCATCAAGCGGGACACTATTAA...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp TCTTTCATTCGAGAAATGAGGAGCTCTCTCTCCAATGACTGCAGTATCAGTTTAAGAACTGGAAAAAGCTaGGGAATTCTGTTAGCATTT +
Preference number: 5 (lower is better)
Translates to: SFIREMRSSLSNDCSISLRTGKS*GILLAF
Trigger: AAATGCTAACAGAATTCCCAAGCTTTTTCCAGTTCT...TAAACTGATACTGCAGTCATTGGAGAGAGAGCTCCTCATTTCTCGAATGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATGCCTTCCATTACAATaGCAATCCACACCAAATCAA +
Preference number: 5 (lower is better)
Translates to: PSITIAIHTKSIFENIPPCLPLQ*QSTPNQ
Trigger: TTGATTTGGTGTGGATTGCAATTGTAATGGAAGGCA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCATTAATAGTGTCCCGCTaGATGCTGGTTTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: PSITIAIHTKSIFENIPPLIVSR*MLVFLF
Trigger: AAAAAGAAAAACCAGCATCAAGCGGGACACTATTAA...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS-3UTR CAA 90 bp CCTTCCATTACAATTGCAATCCACACCAAATCAATCTTTGAAAACATTCCTCCAAATAGAAAGGTCAGTTaGATCAATGAGTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: PSITIAIHTKSIFENIPPNRKVS*INEYQK
Trigger: CTTCTGGTACTCATTGATCAAACTGACCTTTCTATT...TGGAGGAATGTTTTCAAAGATTGATTTGGTGTGGATTGCAATTGTAATGGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276141.10
ENST00000372989.5
CDS GCA 72 bp TTGCAACAGGTGCCTCCAGAGATCGAGAAGTCCCAGTaGCGGTTTCAAGGGAGGGTCTCCGGCTCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: LQQVPPEIEKSQ*RFQGRVSGSGK
Trigger: CTTCCCGGAGCCGGAGACCCTCCCTTGAAACCGGCACTGGGACTTCTCGATCTCTGGAGGCACCTGTTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000372981.1
ENST00000491326.1
CDS GCA 72 bp CCTTCTGCCCAAGACCCTGGGTACTGTCGCATCTTCTaGCACAGGCTCACTTCTTCCCCAGTCGAGTCCATC +
Preference number: 6 (lower is better)
Translates to: PSAQDPGYCRIF*HRLTSSPVESI
Trigger: GATGGACTCGACTGGGGAAGAAGTGAGCCTGTGGCAGAAGATGCGACAGTACCCAGGGTCTTGGGCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
ENST00000491602.1
CDS GCA 72 bp GGCACCGGGCACAGGTCCGATCACTGTAGTGTTGGCTaGCCCTCTTGGCCCCTTTCCTTTTTATCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: GTGHRSDHCSVG*PSWPLSFLSPV
Trigger: TACTGGAGATAAAAAGGAAAGGGGCCAAGAGGGGCAGCCAACACTACAGTGATCGGACCTGTGCCCGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 72 bp TTTCCTTGGCGCACACCTTGCACCTCCAGGTACCATTaGTTTCCTGTATGCGGCAGTCCCGACACACCAGGT +
Preference number: 6 (lower is better)
Translates to: FPWRTPCTSRYH*FPVCGSPDTPG
Trigger: ACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 72 bp ACACCAGGTGATTACAACCCCGACAAGTATTGGTTTTaGGACTCAAACGGCCCAGGCTCTCCTGGCACCGGG +
Preference number: 6 (lower is better)
Translates to: TPGDYNPDKYWF*DSNGPGSPGTG
Trigger: CCCGGTGCCAGGAGAGCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTGTAATCACCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 72 bp CCCGACACACCAGGTGATTACAACCCCGACAAGTATTaGTTTTGGGACTCAAACGGCCCAGGCTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: PDTPGDYNPDKY*FWDSNGPGSPG
Trigger: GCCAGGAGAGCCTGGGCCGTTTGAGTCCCAAAACCAATACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CAA 72 bp ATTTCCTTGGCGCACACCTTGCACCTCCAGGTACCATaGCTTTCCTGTATGCGGCAGTCCCGACACACCAGG +
Preference number: 6 (lower is better)
Translates to: ISLAHTLHLQVP*LSCMRQSRHTR
Trigger: CCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 72 bp ACACCTTGCACCTCCAGGTACCATTGCTTTCCTGTATaGGGCAGTCCCGACACACCAGGTGATTACAACCCC +
Preference number: 6 (lower is better)
Translates to: TPCTSRYHCFPV*GSPDTPGDYNP
Trigger: GGGGTTGTAATCACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 72 bp CTGCAGAAGAGGACAGGGACTCATAAACCCAGCTTCTaGTTGGCCATTGAGGAACGGAGCTGCAGAGTCCCT +
Preference number: 6 (lower is better)
Translates to: LQKRTGTHKPSF*LAIEERSCRVP
Trigger: AGGGACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATGAGTCCCTGTCCTCTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
ENST00000491602.1
CDS CCA 72 bp GGGCTCCTTCTGCCGCTCCTGAATGATCTTTCTTCCTaGCCAGATGTCACCCATCTGTGTCTGATGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GLLLPLLNDLSS*PDVTHLCLMKE
Trigger: CTCCTTCATCAGACACAGATGGGTGACATCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGAAGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 72 bp AGAAGAGGACAGGGACTCATAAACCCAGCTTCTGCTTaGCCATTGAGGAACGGAGCTGCAGAGTCCCTTCTG +
Preference number: 6 (lower is better)
Translates to: RRGQGLINPASA*PLRNGAAESLL
Trigger: CAGAAGGGACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATGAGTCCCTGTCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
ENST00000491602.1
CDS CAA 72 bp CAGAAGAGGACAGGGACTCATAAACCCAGCTTCTGCTaGGCCATTGAGGAACGGAGCTGCAGAGTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: QKRTGTHKPSFC*AIEERSCRVPS
Trigger: AGAAGGGACTCTGCAGCTCCGTTCCTCAATGGCCAAGCAGAAGCTGGGTTTATGAGTCCCTGTCCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
ENST00000491602.1
CDS TCA 72 bp CAAATAGCACACTGGGCTCCTTCTGCCGCTCCTGAATaGTCTTTCTTCCTGGCCAGATGTCACCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: QIAHWAPSAAPE*SFFLARCHPSV
Trigger: CACAGATGGGTGACATCTGGCCAGGAAGAAAGATCATTCAGGAGCGGCAGAAGGAGCCCAGTGTGCTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS TCA 72 bp GAGAGTCTCTCCTGGAGGTGCTATCCGAGTCAGCTGTaGAGCTATCCAGACTCTCACTCTCAGCTTCCAATG +
Preference number: 6 (lower is better)
Translates to: ESLSWRCYPSQL*SYPDSHSQLPM
Trigger: CATTGGAAGCTGAGAGTGAGAGTCTGGATAGCTTCACAGCTGACTCGGATAGCACCTCCAGGAGAGACTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 72 bp TGCTGCCGATCGTACTCATGGAGGAGCCACTTTGCATaGTGCTTCTGGCTAGCTTCTGGCGATGTAACTTCA +
Preference number: 6 (lower is better)
Translates to: CCRSYSWRSHFA*CFWLASGDVTS
Trigger: TGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS GCA 72 bp ATCATGCTGCCGATCGTACTCATGGAGGAGCCACTTTaGATGCTGCTTCTGGCTAGCTTCTGGCGATGTAAC +
Preference number: 6 (lower is better)
Translates to: IMLPIVLMEEPL*MLLLASFWRCN
Trigger: GTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CCA 72 bp GTTTACTGGCCTTGTTCCTCATGGGAAGGAGGTATCTaGCAGAGGGCGGGGAGTAATCAACAGCCTACTCAA +
Preference number: 6 (lower is better)
Translates to: VYWPCSSWEGGI*QRAGSNQQPTQ
Trigger: TTGAGTAGGCTGTTGATTACTCCCCGCCCTCTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS TCA 72 bp TTGCTTTCCTGTATGCGGCAGTCCCGACACACCAGGTaGTTACAACCCCGACAAGTATTGGTTTTGGGACTC +
Preference number: 6 (lower is better)
Translates to: LLSCMRQSRHTR*LQPRQVLVLGL
Trigger: GAGTCCCAAAACCAATACTTGTCGGGGTTGTAATCACCTGGTGTGTCGGGACTGCCGCATACAGGAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS GCA 72 bp TGCCGATCGTACTCATGGAGGAGCCACTTTGCATGCTaGTTCTGGCTAGCTTCTGGCGATGTAACTTCACTA +
Preference number: 6 (lower is better)
Translates to: CRSYSWRSHFAC*FWLASGDVTSL
Trigger: TAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTCCATGAGTACGATCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS GCA 72 bp TCCCGAAATCACCAGCTTCACTGTAGATGCTCATCATaGTGCCGATCGTACTCATGGAGGAGCCACTTTGCA +
Preference number: 6 (lower is better)
Translates to: SRNHQLHCRCSS*CRSYSWRSHFA
Trigger: TGCAAAGTGGCTCCTCCATGAGTACGATCGGCAGCATGATGAGCATCTACAGTGAAGCTGGTGATTTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CAA 90 bp GTTTTGGAGGCTGGGATGTATTTCAATGAAACCACCAACTCGCCTTaGTGTGATGGCAAGCCAGTCGGGGACTCAGCACTGATCTTTCCA +
Preference number: 6 (lower is better)
Translates to: VLEAGMYFNETTNSP*CDGKPVGDSALIFP
Trigger: TGGAAAGATCAGTGCTGAGTCCCCGACTGGCTTGCCATCACACAAAGGCGAGTTGGTGGTTTCATTGAAATACATCCCAGCCTCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS GCA 72 bp TTGCTTTCTTCAACTCTATTTCCTTGGCGCACACCTTaGACCTCCAGGTACCATTGCTTTCCTGTATGCGGC +
Preference number: 6 (lower is better)
Translates to: LLSSTLFPWRTP*TSRYHCFPVCG
Trigger: GCCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGAAGAAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 72 bp GAGGAGCCACTTTGCATGCTGCTTCTGGCTAGCTTCTaGCGATGTAACTTCACTAGGTGGTCAATGTCTTCT +
Preference number: 6 (lower is better)
Translates to: EEPLCMLLLASF*RCNFTRWSMSS
Trigger: AGAAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAGCAGCATGCAAAGTGGCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CAA 72 bp GTTGCTTTCTTCAACTCTATTTCCTTGGCGCACACCTaGCACCTCCAGGTACCATTGCTTTCCTGTATGCGG +
Preference number: 6 (lower is better)
Translates to: VAFFNSISLAHT*HLQVPLLSCMR
Trigger: CCGCATACAGGAAAGCAATGGTACCTGGAGGTGCAAGGTGTGCGCCAAGGAAATAGAGTTGAAGAAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CAA 72 bp GTCTTCTTCATCACAGGAGTTTTACGTTTACTGGCCTaGTTCCTCATGGGAAGGAGGTATCTGGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: VFFITGVLRLLA*FLMGRRYLAEG
Trigger: GCCCTCTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS TCA 72 bp TTTTACTCACTGCAGGTTTGTGGCGCAGGGACATCCTaGTTATCTCACTACCTGTGCGGTAAGCAAAGCGAT +
Preference number: 6 (lower is better)
Translates to: FYSLQVCGAGTS*LSHYLCGKQSD
Trigger: ATCGCTTTGCTTACCGCACAGGTAGTGAGATAATCAGGATGTCCCTGCGCCACAAACCTGCAGTGAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CCA 72 bp TCAGGGTCTTCTTCATCACAGGAGTTTTACGTTTACTaGCCTTGTTCCTCATGGGAAGGAGGTATCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SGSSSSQEFYVY*PCSSWEGGIWQ
Trigger: CTGCCAGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491602.1
CDS CAA 90 bp GGATTCAGGGTCTTCTTCATCACAGGAGTTTTACGTTTACTGGCCTaGTTCCTCATGGGAAGGAGGTATCCCTTGACAAAGCTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: GFRVFFITGVLRLLA*FLMGRRYPLTKLSE
Trigger: TTCAGACAGCTTTGTCAAGGGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGACCCTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CAA 90 bp TCATACCTCAGCGTCTCATCATATAGTGGATTAATAGTGTCCCGCTaGATGCTGGTTTTTCTTTTTCCTTGGCGGGACTTGTCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SYLSVSSYSGLIVSR*MLVFLFPWRDLSGR
Trigger: TCTGCCTGACAAGTCCCGCCAAGGAAAAAGAAAAACCAGCATCAAGCGGGACACTATTAATCCACTATATGATGAGACGCTGAGGTATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CAA 72 bp GTCTTCTTCATCACAGGAGTTTTACGTTTACTGGCCTaGTTCCTCATGGGAAGGAGGTATCCCTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: VFFITGVLRLLA*FLMGRRYPLTK
Trigger: CTTTGTCAAGGGATACCTCCTTCCCATGAGGAACAAGGCCAGTAAACGTAAAACTCCTGTGATGAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS TCA 72 bp GACTCAGCACTGATCTTTCCATGTAAAGGGAGGCAATaGTCCAGTTTCTTATCAAGCTTCCAGGAATCCATC +
Preference number: 6 (lower is better)
Translates to: DSALIFPCKGRQ*SSFLSSFQESI
Trigger: GATGGATTCCTGGAAGCTTGATAAGAAACTGGATCATTGCCTCCCTTTACATGGAAAGATCAGTGCTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372989.5
CDS CCA 72 bp CTTCTGGCTAGCTTCTGGCGATGTAACTTCACTAGGTaGTCAATGTCTTCTTCTTCTTCTTCCTCTTCCATA +
Preference number: 6 (lower is better)
Translates to: LLASFWRCNFTR*SMSSSSSSSSI
Trigger: TATGGAAGAGGAAGAAGAAGAAGAAGACATTGACCACCTAGTGAAGTTACATCGCCAGAAGCTAGCCAGAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5
CDS CAA 72 bp AAATATCATCTCACCCTCATCCACAAATACCACATTTaGACCTCCAGGCTGAGTTTCCTTTTCTACTTGAGA +
Preference number: 6 (lower is better)
Translates to: KYHLTLIHKYHI*TSRLSFLFYLR
Trigger: TCTCAAGTAGAAAAGGAAACTCAGCCTGGAGGTCAAAATGTGGTATTTGTGGATGAGGGTGAGATGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263033.9
ENST00000276141.10
ENST00000372981.1
ENST00000372989.5