RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYTL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164674

Ensembl transcript IDs: ENST00000360448.8, ENST00000367081.7, ENST00000469735.1, ENST00000611299.5

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACCCTaGACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGC +
Preference number: 1 (lower is better)
Translates to: QMETAQGQRGLQLGP*TWFVAPLQTHSASR
Trigger: GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACTCCAGCTGGGACCCTaGACCTGGTTCGTAGCCCCT +
Preference number: 2 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQLQLGP*TWFVAP
Trigger: AGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACTGGGACCCTGCACCTaGTTCGTAGCCCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQLGPCT*FVAPLQ
Trigger: CTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAAAGGGGTCTCCAGCTaGGACCCTGCACCTGGTTCG +
Preference number: 2 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRKGVSS*DPAPGS
Trigger: CGAACCAGGTGCAGGGTCCCAGCTGGAGACCCCTTT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTCCAGCTGGGACCCTaGACCTGGTTCGTAGCCCCT +
Preference number: 2 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLQLGP*TWFVAP
Trigger: AGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTGGGACCCTGCACCTaGTTCGTAGCCCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLGPCT*FVAPLQ
Trigger: CTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGATCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACC +
Preference number: 2 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGSADAQ*LTPAAT
Trigger: GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGA...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGGACAGGGCCGCAGATaGAGACTGCTCAAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPGQGRR*RLLKVK
Trigger: TTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
3UTR-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATG +
Preference number: 2 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGTPAAT*NLEAFM
Trigger: CATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
3UTR GCA 72 bp CTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACCTGGAACCTTGAGGCC +
Preference number: 3 (lower is better)
Translates to: LHLVRSPSADAQ*LTPAATWNLEA
Trigger: GGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCCACACACGCGGTGGCTaGAGCCCCGGCACACGGCGC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATHTRGG*SPGTRR
Trigger: GCGCCGTGTGCCGGGGCTGCAGCCACCGCGTGTGTG...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCACACGGCGCCCCGGTaGAGCAGGAACCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRHTAPR*SRNPST
Trigger: GGTGCTGGGGTTCCTGCTGCACCGGGGCGCCGTGTG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCACACACGCGGTGGCTaGAGCCCCGGCACACGGCGC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPHTRGG*SPGTRR
Trigger: GCGCCGTGTGCCGGGGCTGCAGCCACCGCGTGTGTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTGGGCACACACGCGGTaGCTGCAGCCCCGGCACACG +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTWAHTR*LQPRHT
Trigger: CGTGTGCCGGGGCTGCAGCCACCGCGTGTGTGCCCA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATGGGCACACACGCGGTaGCTGCAGCCCCGGCACACG +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGWAHTR*LQPRHT
Trigger: CGTGTGCCGGGGCTGCAGCCACCGCGTGTGTGCCCA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTAGGAACCCCAGCACCTaGTGGCAGCGCGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPARNPST*WQRAQH
Trigger: GTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCT...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTGCCACACCGAGACCTaGAGCTGCCGGGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSCHTET*SCRVTS
Trigger: GCTGGTGACCCGGCAGCTGCAGGTCTCGGTGTGGCA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCCTTCCTGCCAGGACTaGGGCTGCACTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRPSCQD*GCTGSR
Trigger: GCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGAAGG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR TCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGGCTGGGCTGGTACCTaGCTATGCCAGCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSGWAGT*LCQQGQ
Trigger: TTGCCCCTGCTGGCATAGTCAGGTACCAGCCCAGCC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGGCTGGGCTGGTACCTaGCTATGCCAGCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATGWAGT*LCQQGQ
Trigger: TTGCCCCTGCTGGCATAGTCAGGTACCAGCCCAGCC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCAGGAACCCCAGCACCTaGTGGCAGCGCGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTRNPST*WQRAQH
Trigger: GTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACACACGGCGCCCCGGTaGAGCAGGAACCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPHTAPR*SRNPST
Trigger: GGTGCTGGGGTTCCTGCTGCACCGGGGCGCCGTGTG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGTAACCTGCCAGGACTaGGGCTGCACTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSVTCQD*GCTGSR
Trigger: GCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGTTAC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGTCTGTCCCACACACTaGCTGGGGCCCGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPVCPTH*LGPVAR
Trigger: TCTCGCCACGGGCCCCAGGCAGTGTGTGGGACAGAC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAGTCTGTCCCACACACTaGCTGGGGCCCGTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGVCPTH*LGPVAR
Trigger: TCTCGCCACGGGCCCCAGGCAGTGTGTGGGACAGAC...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCTCTCCGGGCCAGCGTaGCCAGATGCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPLSGPA*PDATPR
Trigger: TCTCGGTGTGGCATCTGGGCACGCTGGCCCGGAGAG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTCTCCAGCTGGGACCCTaGACCTGGTTCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSLQLGP*TWFVAP
Trigger: AGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAG...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGAGGAACACTCGGCACTaGGCACACACGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRRNTRH*AHTRWL
Trigger: CAGCCACCGCGTGTGTGCCCAGTGCCGAGTGTTCCT...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATGLRLH*LSLTGG
Trigger: ACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGGTCCCACACACTGCCTaGGGCCCGTGGCGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRVPHTA*GPWRED
Trigger: ATCTTCTCGCCACGGGCCCCAGGCAGTGTGTGGGAC...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTGGGACCCTGCACCTaGTTCGTAGCCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLGPCT*FVAPLQ
Trigger: CTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTTGACTGCCTCAGCTaGGCTGGGGTTACGCCACTG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLDCLS*AGVTPL
Trigger: CAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCACTGGCATCCCTCAGTaGCCCAAGGCTCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRTGIPQ*PKALSL
Trigger: GAGACTCAGAGCCTTGGGGCACTGAGGGATGCCAGT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGTAACCTGCCAGGACTaGGGCTGCACTGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTVTCQD*GCTGSR
Trigger: GCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGTTAC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTTGGCCCGGAGCGGATaGCAGCGGAAGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPALARSG*QRKDCV
Trigger: AACACAGTCCTTCCGCTGGCATCCGCTCCGGGCCAA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACACTGGGGGCAAGCCTaGTTCCTCAGGACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGHWGQA*FLRTGD
Trigger: GTCGCCAGTCCTGAGGAAGCAGGCTTGCCCCCAGTG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCACTGGGGGCAAGCCTaGTTCCTCAGGACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTHWGQA*FLRTGD
Trigger: GTCGCCAGTCCTGAGGAAGCAGGCTTGCCCCCAGTG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSSADAQ*LTPAAT
Trigger: GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGCGGCGGAGGCCAGCTaGAGCCAGCCTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATAAEAS*SQPCLK
Trigger: CTTTAAACAAGGCTGGCTGCAGCTGGCCTCCGCCGC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAAACCCCAGCACCTGCTaGCAGCGCGCACAGCACTTC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGNPSTC*QRAQHF
Trigger: GAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPGLRLH*LSLTGG
Trigger: ACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTGLRLH*LSLTGG
Trigger: ACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTACTGCCTGGGGCCCGTaGCGAGAAGATGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSTAWGP*REDASQ
Trigger: CTGAGAAGCATCTTCTCGCCACGGGCCCCAGGCAGT...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGTCCCACACACTGCCTaGGGCCCGTGGCGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPVPHTA*GPWRED
Trigger: ATCTTCTCGCCACGGGCCCCAGGCAGTGTGTGGGAC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGTCTTGCGCTTTCCCTaGGAGGATCTGTCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRVLRFP*EDLSGN
Trigger: GTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGAC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCGTATTTCTCCGCCTTaGCCCGGAGCGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTRISPP*PGADAS
Trigger: GCTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACTGGGACCCTGCACCTaGTTCGTAGCCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGLGPCT*FVAPLQ
Trigger: CTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCTTGACTGCCTCAGCTaGGCTGGGGTTACGCCACTG +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPLDCLS*AGVTPL
Trigger: CAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTACTGGCATCCCTCAGTaGCCCAAGGCTCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSTGIPQ*PKALSL
Trigger: GAGACTCAGAGCCTTGGGGCACTGAGGGATGCCAGT...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTCTCCGGGCCAGCGTaGCCAGATGCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLSGPA*PDATPR
Trigger: TCTCGGTGTGGCATCTGGGCACGCTGGCCCGGAGAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTTCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPSADAQ*LTPAAT
Trigger: GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGA...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTSADAQ*LTPAAT
Trigger: GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCAGCCCGTTCAATACCTaGCTGGGCTGGTACCTGACT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRSPFNT*LGWYLT
Trigger: AGTCAGGTACCAGCCCAGCCAGGTATTGAACGGGCT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCAAGAGCTTCACTGCATaGACCAAGCGCTCACGCCCT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRKSFTA*TKRSRP
Trigger: AGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGTGCACTTCCAGGCATaGGTCCCCCTCAGGAACACT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSVHFQA*VPLRNT
Trigger: AGTGTTCCTGAGGGGGACCCATGCCTGGAAGTGCAC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTCGCTGACAGGAGGTaGAGTAGGAGGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRLADRR*SRRNHR
Trigger: TCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCACTGCCTGGGGCCCGTaGCGAGAAGATGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTTAWGP*REDASQ
Trigger: CTGAGAAGCATCTTCTCGCCACGGGCCCCAGGCAGT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGTCTTGCGCTTTCCCTaGGAGGATCTGTCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAVLRFP*EDLSGN
Trigger: GTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGAC...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTCTGCCTCAGCTGAGCTaGGGTTACGCCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPALPQLS*GYATED
Trigger: GTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAG...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTAAAGGGGTCTCCAGCTaGGACCCTGCACCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPKGVSS*DPAPGS
Trigger: CGAACCAGGTGCAGGGTCCCAGCTGGAGACCCCTTT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGGCTGGGCTGGTACCTaGCTATGCCAGCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPGWAGT*LCQQGQ
Trigger: TTGCCCCTGCTGGCATAGTCAGGTACCAGCCCAGCC...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTCCTCCTCTGTGTTTTaGACCGCCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSSSSVF*TAWSRY
Trigger: GTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTACTTCAAGGTCTCCTaGAAGGTCGGGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAYFKVS*KVGSTV
Trigger: CACCGTGGACCCGACCTTTCAGGAGACCTTGAAGTA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAACTGGCATCCCTCAGTaGCCCAAGGCTCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGTGIPQ*PKALSL
Trigger: GAGACTCAGAGCCTTGGGGCACTGAGGGATGCCAGT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTTGGAAGAGCTTCACTaGATGGACCAAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRLEELH*MDQALT
Trigger: CGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTTTGGACTCCAGTCTTaGGCTTTCCCTGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRFGLQS*AFPGRI
Trigger: GATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCAAGAGCTTCACTGCATaGACCAAGCGCTCACGCCCT +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATKSFTA*TKRSRP
Trigger: AGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGAAGAGCTTCACTGCATaGACCAAGCGCTCACGCCCT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRKSFTA*TKRSRP
Trigger: AGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTT...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCTCGGTACAGGACCTaGAGAATGGCCTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATSRYRT*RMASRS
Trigger: AGAACGCGAGGCCATTCTCCAGGTCCTGTACCGAGA...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGGGTGCCGGACTGGATaGGAGATTCTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRGCRTG*EILLLQ
Trigger: TTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTACTGGGTGCCGGACTaGATGGGAGATTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRYWVPD*MGDSVA
Trigger: AGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCCTCTTGGAGTTTTCTaGGCCGTGAAGGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRPLGVF*AVKGEP
Trigger: TGGTTCTCCCTTCACGGCCCAGAAAACTCCAAGAGG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCTGCCTCAGCTGAGCTaGGGTTACGCCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTLPQLS*GYATED
Trigger: GTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGATCCAGGTTCCAGATaGACAGGCAGAACTGGCATC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATDPGSR*TGRTGI
Trigger: GATGCCAGTTCTGCCTGTTCATCTGGAACCTGGATC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCAGCAGGAACCATCATaGAAAGCTCAGCCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRQQEPS*KAQPVQ
Trigger: TTGAACGGGCTGAGCTTTTCATGATGGTTCCTGCTG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATCCTCCTCTGTGTTTTaGACCGCCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGSSSVF*TAWSRY
Trigger: GTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATACTTCAAGGTCTCCTaGAAGGTCGGGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGYFKVS*KVGSTV
Trigger: CACCGTGGACCCGACCTTTCAGGAGACCTTGAAGTA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCCACTGAAGACAAATaGGTGTTTCCACTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAATEDK*VFPLGA
Trigger: TGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGC...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTTGACTGCCTCAGCTaGGCTGGGGTTACGCCACTG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLDCLS*AGVTPL
Trigger: CAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTGCAACCTGGAACCTTaGGGCCTTCATGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRCNLEP*GLHVSA
Trigger: TGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGCAACCTGGAACCTTaGGGCCTTCATGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATCNLEP*GLHVSA
Trigger: TGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCA...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGAATATGGTACTGGGTaGCGGACTGGATGGGAGATT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASREYGTG*RTGWEI
Trigger: AATCTCCCATCCAGTCCGGCACCCAGTACCATATTC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTTTGGACTCCAGTCTTaGGCTTTCCCTGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSFGLQS*AFPGRI
Trigger: GATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCAAATGAGTTCAAGGTaGCATCTGGCCGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRQMSSR*HLAAQV
Trigger: TACCTGTGCGGCCAGATGGCACCTTGAACTCATTTG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAGCCGCAGATGGAGACTaGTCAAGGTCAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGAADGD*SRSKGS
Trigger: AGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGC...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGCCGCAGATGGAGACTaGTCAAGGTCAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTAADGD*SRSKGS
Trigger: AGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCAATACCTGGCTGGGCTaGTACCTGACTATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATNTWLG*YLTMPA
Trigger: TGCTGGCATAGTCAGGTACCAGCCCAGCCAGGTATT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRFVDPG*KSFTAW
Trigger: CCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTCTCGGTACAGGACCTaGAGAATGGCCTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTSRYRT*RMASRS
Trigger: AGAACGCGAGGCCATTCTCCAGGTCCTGTACCGAGA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCTCGCTGACAGGAGGTaGAGTAGGAGGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTLADRR*SRRNHR
Trigger: TCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAACCGCAGTGTCAGACTaGCTCCGTCTCTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGTAVSD*LRLSVC
Trigger: ACAGACAGAGAGACGGAGCCAGTCTGACACTGCGGT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGGGTGCCGGACTGGATaGGAGATTCTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATGCRTG*EILLLQ
Trigger: TTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGGGGTGCCGGACTGGATaGGAGATTCTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRGCRTG*EILLLQ
Trigger: TTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCC...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCCTCTTGGAGTTTTCTaGGCCGTGAAGGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRPLGVF*AVKGEP
Trigger: TGGTTCTCCCTTCACGGCCCAGAAAACTCCAAGAGG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTTPAAT*NLEAFM
Trigger: CATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAAAAGGGGTCTCCAGCTaGGACCCTGCACCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPKGVSS*DPAPGS
Trigger: CGAACCAGGTGCAGGGTCCCAGCTGGAGACCCCTTT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGACAGGGCCGCAGATaGAGACTGCTCAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPGQGRR*RLLKVK
Trigger: TTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGGACAGGGCCGCAGATaGAGACTGCTCAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTGQGRR*RLLKVK
Trigger: TTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCAAGGCTCTGAGTCTCTaGGAGAGGACAAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRKALSL*ERTKLN
Trigger: GTTCAACTTTGTCCTCTCTCAGAGACTCAGAGCCTT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAGATCCAGGTTCCAGATaGACAGGCAGAACTGGCATC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGDPGSR*TGRTGI
Trigger: GATGCCAGTTCTGCCTGTTCATCTGGAACCTGGATC...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTCTTCTCCGTTTTCGTTaGCCCAGGTTGGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSLLRFR*PRLEEL
Trigger: AAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAG...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCAGCTCTCCATTACTCTaGGGAACGCTGTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRSSPLL*GTLSSY
Trigger: ATACGAAGACAGCGTTCCTCAGAGTAATGGAGAGCT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCACAGCCCTTAACAAATaGGTTCAAGGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRTALNK*VQGAIW
Trigger: CCAGATGGCACCTTGAACTCATTTGTTAAGGGCTGT...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCATTCCAAAGAGGGCCTaGTCCCAGACAGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATIPKRA*SQTVNS
Trigger: GGAGTTAACTGTCTGGGATCAGGCCCTCTTTGGAAT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATGCAACCTGGAACCTTaGGGCCTTCATGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGCNLEP*GLHVSA
Trigger: TGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGGAGCCTTCGCATCTaGTTCAAGAGAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPGSLRI*FKRRDQ
Trigger: CTGGTCTCTTCTCTTGAAGCAGATGCGAAGGCTCCC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000367081.7
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTTTGGAAGAGCTTCACTaGATGGACCAAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPLEELH*MDQALT
Trigger: CGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAA...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCCTTTCCACCGGAGATaGTGCAGGTGTGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRPFHRR*CRCVFS
Trigger: ACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGAATATGGTACTGGGTaGCGGACTGGATGGGAGATT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSEYGTG*RTGWEI
Trigger: AATCTCCCATCCAGTCCGGCACCCAGTACCATATTC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTTGGACTCCAGTCTTaGGCTTTCCCTGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTFGLQS*AFPGRI
Trigger: GATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGGAAAGGACTTTCTaGCACTGGAGCTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRLERTF*HWSFDS
Trigger: ACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCATGAACAGGCAGAACTaGCATCCCTCAGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTMNRQN*HPSVPQ
Trigger: TTGGGGCACTGAGGGATGCCAGTTCTGCCTGTTCAT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCAATACCTGGCTGGGCTaGTACCTGACTATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTNTWLG*YLTMPA
Trigger: TGCTGGCATAGTCAGGTACCAGCCCAGCCAGGTATT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTAATACCTGGCTGGGCTaGTACCTGACTATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPNTWLG*YLTMPA
Trigger: TGCTGGCATAGTCAGGTACCAGCCCAGCCAGGTATT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRFVDPG*KSFTAW
Trigger: CCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCACAGGACCTGGAGAATaGCCTCGCGTTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTTGPGE*PRVLTP
Trigger: AGGAGTTAGAACGCGAGGCCATTCTCCAGGTCCTGT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAGAGAATATGGTACTaGGTGCCGGACTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQRIWY*VPDWMG
Trigger: TCCCATCCAGTCCGGCACCCAGTACCATATTCTCTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTCCACGGTGTTCCTTTaGACTCCAGTCTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRSTVFL*TPVLRF
Trigger: AAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTCCACGGTGTTCCTTTaGACTCCAGTCTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPASTVFL*TPVLRF
Trigger: AAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACGTATTTCTCCGCCTTaGCCCGGAGCGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQRISPP*PGADAS
Trigger: GCTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTAATGAGTGTTTCCACTaGGGGCAAGCCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPNECFH*GQACFL
Trigger: GAGGAAGCAGGCTTGCCCCCAGTGGAAACACTCATT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAAATGAGTGTTTCCACTaGGGGCAAGCCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGNECFH*GQACFL
Trigger: GAGGAAGCAGGCTTGCCCCCAGTGGAAACACTCATT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGAGAGAGGACAAAGTTaGACAGGCGCTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAERGQS*TGAFSE
Trigger: TTCAGAGAAAGCGCCTGTTCAACTTTGTCCTCTCTC...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTAAGGCTCTGAGTCTCTaGGAGAGGACAAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSKALSL*ERTKLN
Trigger: GTTCAACTTTGTCCTCTCTCAGAGACTCAGAGCCTT...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAGCAGGAACCATCATaGAAAGCTCAGCCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQQEPS*KAQPVQ
Trigger: TTGAACGGGCTGAGCTTTTCATGATGGTTCCTGCTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCTTCTCCGTTTTCGTTaGCCCAGGTTGGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPLLRFR*PRLEEL
Trigger: AAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCTGGGGTTACGCCACTaGAGACAAATGAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPLGLRH*RQMSVS
Trigger: GGAAACACTCATTTGTCTTCAGTGGCGTAACCCCAG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTATTCCAAAGAGGGCCTaGTCCCAGACAGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPIPKRA*SQTVNS
Trigger: GGAGTTAACTGTCTGGGATCAGGCCCTCTTTGGAAT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACAGCACTTCTCTTTGTaGTCCCAGTCCGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGQHFSL*SQSVFF
Trigger: GAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCAGCACTTCTCTTTGTaGTCCCAGTCCGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTQHFSL*SQSVFF
Trigger: GAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCAAATGAGTTCAAGGTaGCATCTGGCCGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTQMSSR*HLAAQV
Trigger: TACCTGTGCGGCCAGATGGCACCTTGAACTCATTTG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAAATGAGTTCAAGGTaGCATCTGGCCGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQMSSR*HLAAQV
Trigger: TACCTGTGCGGCCAGATGGCACCTTGAACTCATTTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTCTGGAAAGGACTTTCTaGCACTGGAGCTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSLERTF*HWSFDS
Trigger: ACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAG...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCAGGCCTTCATGTCAGTaGAGGACAAGAGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATRPSCQ*RTRVMS
Trigger: AGACATGACTCTTGTCCTGCACTGACATGAAGGCCT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCCGCAGATGGAGACTaGTCAAGGTCAAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPAADGD*SRSKGS
Trigger: AGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGC...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCAGCCTCAAGAAGTTCTaGGTTTGTCGGAGTTACGGC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTSLKKF*VCRSYG
Trigger: GCCGTAACTCCGACAAACGCAGAACTTCTTGAGGCT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAGCGGCGGAGGCCAGCTaGAGCCAGCCTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQAAEAS*SQPCLK
Trigger: CTTTAAACAAGGCTGGCTGCAGCTGGCCTCCGCCGC...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAAGCCCGTTCAATACCTaGCTGGGCTGGTACCTGACT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPSPFNT*LGWYLT
Trigger: AGTCAGGTACCAGCCCAGCCAGGTATTGAACGGGCT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTFVDPG*KSFTAW
Trigger: CCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTCGCTGACAGGAGGTaGAGTAGGAGGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLADRR*SRRNHR
Trigger: TCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATCCACGGTGTTCCTTTaGACTCCAGTCTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGSTVFL*TPVLRF
Trigger: AAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTCAGTTTTTGTTGGTCTaGCAGAGTGAGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSQFLLV*QSETAL
Trigger: AAGGGCTGTCTCACTCTGCCAGACCAACAAAAACTG...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCAGTTTTTGTTGGTCTaGCAGAGTGAGACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRQFLLV*QSETAL
Trigger: AAGGGCTGTCTCACTCTGCCAGACCAACAAAAACTG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACCTTTGAACCAAGTCTaGTTCCTCCAAGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGPLNQV*FLQASG
Trigger: ACCGCTTGCTTGGAGGAACCAGACTTGGTTCAAAGG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTCCATAGATTGGGGCTaGAAAGGACTTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRSIDWG*KGLSAT
Trigger: AGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPTPAAT*NLEAFM
Trigger: CATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCAACAGGCGCTTTCTCTaGAAGATCACTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATNRRFL*KITAIH
Trigger: GTGAATTGCAGTGATCTTTCAGAGAAAGCGCCTGTT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGAGAGAGGACAAAGTTaGACAGGCGCTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPERGQS*TGAFSE
Trigger: TTCAGAGAAAGCGCCTGTTCAACTTTGTCCTCTCTC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTCCAGTTTTTATTTTaGCATTCCTGTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRLQFLF*HSCPRS
Trigger: GCTTCGAGGACAGGAATGTCAAAATAAAAACTGGAG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTGGGATCCTCTTGATTaGGAGGTTTCAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRWDPLD*EVSEYL
Trigger: CAGATATTCTGAAACCTCTCAATCAAGAGGATCCCA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAACGTGGCCAGAGGAATaGTCACTTCTCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGTWPEE*SLLQET
Trigger: TGTTTCTTGGAGAAGTGATCATTCCTCTGGCCACGT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTAGCTCTCCATTACTCTaGGGAACGCTGTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPSSPLL*GTLSSY
Trigger: ATACGAAGACAGCGTTCCTCAGAGTAATGGAGAGCT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGACCAGAGCCGGCTCTaGAGAGAAGGAAGTCAATTC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPDQSRL*REGSQF
Trigger: GAATTGACTTCCTTCTCTGCAGAGCCGGCTCTGGTC...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000367081.7
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCATTGGAAGAGCTTCACTaGATGGACCAAGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLEELH*MDQALT
Trigger: CGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAA...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTTTCAGAATATCTGGTaGACTGACCTTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSFQNIW*TDLPGG
Trigger: ACCACCAGGAAGGTCAGTGCACCAGATATTCTGAAA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCAGGCCTTCATGTCAGTaGAGGACAAGAGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTRPSCQ*RTRVMS
Trigger: AGACATGACTCTTGTCCTGCACTGACATGAAGGCCT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAAGGCCTTCATGTCAGTaGAGGACAAGAGTCATGTCT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGRPSCQ*RTRVMS
Trigger: AGACATGACTCTTGTCCTGCACTGACATGAAGGCCT...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAATGAACAGGCAGAACTaGCATCCCTCAGTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPMNRQN*HPSVPQ
Trigger: TTGGGGCACTGAGGGATGCCAGTTCTGCCTGTTCAT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAGTGCACTTCCAGGCATaGGTCCCCCTCAGGAACACT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQVHFQA*VPLRNT
Trigger: AGTGTTCCTGAGGGGGACCCATGCCTGGAAGTGCAC...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGAGAGCTTTTTCACGTaGGTAGCAAGAGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSESFFT*VARDRN
Trigger: GTTTCTGTCTCTTGCTACCCACGTGAAAAAGCTCTC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGGAGAGCTTTTTCACGTaGGTAGCAAGAGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRESFFT*VARDRN
Trigger: GTTTCTGTCTCTTGCTACCCACGTGAAAAAGCTCTC...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCTATCATTCTGGGATTTaGAGAGCTTTTTCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRYHSGI*RAFSRG
Trigger: CCCACGTGAAAAAGCTCTCCAAATCCCAGAATGATA...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTAGGTTTCAGAATATCTaGTGCACTGACCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSRFQNI*CTDLPG
Trigger: ACCAGGAAGGTCAGTGCACCAGATATTCTGAAACCT...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACAGAGAATATGGTACTaGGTGCCGGACTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPQRIWY*VPDWMG
Trigger: TCCCATCCAGTCCGGCACCCAGTACCATATTCTCTG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAAACCTCCAGAGAATATaGTACTGGGTGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPNLQRI*YWVPDW
Trigger: CCAGTCCGGCACCCAGTACCATATTCTCTGGAGGTT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCGCACAGGTAAATTCTTaGCTCCTAGCACTACCAAAC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATAQVNS*LLALPN
Trigger: GTTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGC...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTAGGACTTTCTGCCACTaGAGCTTCGATAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPRTFCH*SFDSEH
Trigger: ATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTCCATAGATTGGGGCTaGAAAGGACTTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTSIDWG*KGLSAT
Trigger: AGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTGTCTGTCCATAGATTaGGGCTGGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPACLSID*GWKGLS
Trigger: AGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCAGGTTTCAGAATATCTaGTGCACTGACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTRFQNI*CTDLPA
Trigger: GGCAGGAAGGTCAGTGCACCAGATATTCTGAAACCT...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTACTGCAATTCACCGCTaGTTCCGAGTATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPTAIHR*FRVFFL
Trigger: GAGAAAGAATACTCGGAATCAGCGGTGAATTGCAGT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCGCGTTCTAACTCCTTaGGAGCACTCAGATCTATTT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPRVLTP*EHSDLF
Trigger: AAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACGCGTTCTAACTCCTTaGGAGCACTCAGATCTATTT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGRVLTP*EHSDLF
Trigger: AAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCCTCCAGTTTTTATTTTaGCATTCCTGTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATLQFLF*HSCPRS
Trigger: GCTTCGAGGACAGGAATGTCAAAATAAAAACTGGAG...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTGGGATCCTCTTGATTaGGAGGTTTCAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRWDPLD*EVSEYL
Trigger: CAGATATTCTGAAACCTCTCAATCAAGAGGATCCCA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAATACTTCAAGGTCTCCTaGAAGGTCGGGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQYFKVS*KVGSTV
Trigger: CACCGTGGACCCGACCTTTCAGGAGACCTTGAAGTA...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTGGGGTTACGCCACTaGAGACAAATGAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLGLRH*RQMSVS
Trigger: GGAAACACTCATTTGTCTTCAGTGGCGTAACCCCAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCACACGGCGCCCCGGTaGAGCAGGAACCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRHTAPR*SRNPST
Trigger: GGTGCTGGGGTTCCTGCTGCACCGGGGCGCCGTGTG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGAATATGGTACTGGGTaGCGGACTGGATGGGAGATT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPEYGTG*RTGWEI
Trigger: AATCTCCCATCCAGTCCGGCACCCAGTACCATATTC...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAAGCCTCAAGAAGTTCTaGGTTTGTCGGAGTTACGGC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPSLKKF*VCRSYG
Trigger: GCCGTAACTCCGACAAACGCAGAACTTCTTGAGGCT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTCAGATCTATTTCTTaGGCCATTTCTTCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRLRSIS*AISSPF
Trigger: AAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCATGTTTGCCTCCAGTTaGAAATTTCTTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HLVRSPSADAQCLTPAATMFASS*KFLGSF
Trigger: GAACGAGCCAAGAAATTTCCAACTGGAGGCAAACAT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTATCATTCTGGGATTTaGAGAGCTTTTTCACGTGGG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRYHSGI*RAFSRG
Trigger: CCCACGTGAAAAAGCTCTCCAAATCCCAGAATGATA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGCACAGGTAAATTCTTaGCTCCTAGCACTACCAAAC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTAQVNS*LLALPN
Trigger: GTTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACCTCTCCTATTTCACTaGCAACTGTTTTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGPLLFH*QLFCLW
Trigger: CCACAAGCAAAACAGTTGCCAGTGAAATAGGAGAGG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAAAGGCTCTGAGTCTCTaGGAGAGGACAAAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPKALSL*ERTKLN
Trigger: GTTCAACTTTGTCCTCTCTCAGAGACTCAGAGCCTT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAGATCCAGGTTCCAGATaGACAGGCAGAACTGGCATC +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQDPGSR*TGRTGI
Trigger: GATGCCAGTTCTGCCTGTTCATCTGGAACCTGGATC...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTCATTTGGGATCCTCTTaGTTGAGAGGTTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAHLGSS*LRGFRI
Trigger: TATTCTGAAACCTCTCAATCAAGAGGATCCCAAATG...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAGCCACTGAAGACAAATaGGTGTTTCCACTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQATEDK*VFPLGA
Trigger: TGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGC...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAGACCAGAGCCGGCTCTaGAGAGAAGGAAGTCAATTC +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQDQSRL*REGSQF
Trigger: GAATTGACTTCCTTCTCTGCAGAGCCGGCTCTGGTC...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000367081.7
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACAAATTCCTGTAACCTaGCAGGACTGCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQQIPVT*QDCGCT
Trigger: AGTGCAGCCGCAGTCCTGGCAGGTTACAGGAATTTG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGATGGGAGATTCTGTTaGTTCAAAATAGGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRDGRFC*FKIGLV
Trigger: TACTAACCCTATTTTGAAGCAACAGAATCTCCCATC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAACAGGACCTGGAGAATaGCCTCGCGTTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQTGPGE*PRVLTP
Trigger: AGGAGTTAGAACGCGAGGCCATTCTCCAGGTCCTGT...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTATGTTTGCCTCCAGTTaGAAATTTCTTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPMFASS*KFLGSF
Trigger: GAACGAGCCAAGAAATTTCCAACTGGAGGCAAACAT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAATACTGGGTGCCGGACTaGATGGGAGATTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQYWVPD*MGDSVA
Trigger: AGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTA...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCATCCATAGATTGGGGCTaGAAAGGACTTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPSIDWG*KGLSAT
Trigger: AGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGA...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGTTAAATCCTCTAAACTaGCCAAATTCCTGTAACCTG +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLNPLN*PNSCNL
Trigger: CAGGTTACAGGAATTTGGTCAGTTTAGAGGATTTAA...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR TCA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGGGTTCTTACAGGCCTTaGTGCATATTTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: APLQTHSASRLLQPGTLRGSYRP*CIFLKN
Trigger: ATTCTTTAGAAATATGCATCAAGGCCTGTAAGAACC...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACCTTTCCACCGGAGATaGTGCAGGTGTGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQPFHRR*CRCVFS
Trigger: ACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACAGCACTTCTCTTTGTaGTCCCAGTCCGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQQHFSL*SQSVFF
Trigger: GAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCAACTGTCTCATGTTTaGCTCCAGTTGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTQLSHV*LQLEIS
Trigger: AGAAATTTCCAACTGGAGGCAAACATGAGACAGTTG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACAACTGTCTCATGTTTaGCTCCAGTTGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGQLSHV*LQLEIS
Trigger: AGAAATTTCCAACTGGAGGCAAACATGAGACAGTTG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAACTGTCTCATGTTTaGCTCCAGTTGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQLSHV*LQLEIS
Trigger: AGAAATTTCCAACTGGAGGCAAACATGAGACAGTTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGAACCACAGAAATTTTaGTCAGCTTCTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: LGPCTWFVAPLQTHSASREPQKF*SASDKI
Trigger: AATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCTCTCCGGGCCAGCGTaGCCAGATGCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRLSGPA*PDATPR
Trigger: TCTCGGTGTGGCATCTGGGCACGCTGGCCCGGAGAG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCTCAGATCTATTTCTTaGGCCATTTCTTCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTLRSIS*AISSPF
Trigger: AAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGAAGTCATATCATTCTaGGATTTGGAGAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSEVISF*DLESFF
Trigger: GAAAAAGCTCTCCAAATCCCAGAATGATATGACTTC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACCTTTGAACCAAGTCTaGTTCCTCCAAGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQPLNQV*FLQASG
Trigger: ACCGCTTGCTTGGAGGAACCAGACTTGGTTCAAAGG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGTTCTTACAGGCCTTaGTGCATATTTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPGSYRP*CIFLKN
Trigger: ATTCTTTAGAAATATGCATCAAGGCCTGTAAGAACC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACCCGTGGCGAGAAGATaGTTCTCAGAAGTCATATCA +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQPVARR*FSEVIS
Trigger: TGATATGACTTCTGAGAAGCATCTTCTCGCCACGGG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCACTGGGGGCAAGCCTaGTTCCTCAGGACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRHWGQA*FLRTGD
Trigger: GTCGCCAGTCCTGAGGAAGCAGGCTTGCCCCCAGTG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAACCCCAGCACCTGCTaGCAGCGCGCACAGCACTTC +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRNPSTC*QRAQHF
Trigger: GAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAGGAACACTCGGCACTaGGCACACACGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRRNTRH*AHTRWL
Trigger: CAGCCACCGCGTGTGTGCCCAGTGCCGAGTGTTCCT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAATGTTTGCCTCCAGTTaGAAATTTCTTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPMFASS*KFLGSF
Trigger: GAACGAGCCAAGAAATTTCCAACTGGAGGCAAACAT...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCGAAGTCATATCATTCTaGGATTTGGAGAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTEVISF*DLESFF
Trigger: GAAAAAGCTCTCCAAATCCCAGAATGATATGACTTC...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGACTTTCTGCCACTaGAGCTTCGATAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQRTFCH*SFDSEH
Trigger: ATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCT...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGAACCACAGAAATTTTaGTCAGCTTCTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPEPQKF*SASDKI
Trigger: AATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTC...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAATTTCAGAATATCTGGTaGACTGACCTTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQFQNIW*TDLPGG
Trigger: ACCACCAGGAAGGTCAGTGCACCAGATATTCTGAAA...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTTGGCCCGGAGCGGATaGCAGCGGAAGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRLARSG*QRKDCV
Trigger: AACACAGTCCTTCCGCTGGCATCCGCTCCGGGCCAA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTCAGATCTATTTCTTaGGCCATTTCTTCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLRSIS*AISSPF
Trigger: AAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGTTTCAGAATATCTaGTGCACTGACCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQRFQNI*CTDLPG
Trigger: ACCAGGAAGGTCAGTGCACCAGATATTCTGAAACCT...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAATGTCTGTCCATAGATTaGGGCTGGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQCLSID*GWKGLS
Trigger: AGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACA...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCATTAAATCCTCTAAACTaGCCAAATTCCTGTAACCTG +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLNPLN*PNSCNL
Trigger: CAGGTTACAGGAATTTGGTCAGTTTAGAGGATTTAA...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR TCA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGGTTCTTACAGGCCTTaGTGCATATTTCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPGSYRP*CIFLKN
Trigger: ATTCTTTAGAAATATGCATCAAGGCCTGTAAGAACC...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGATGGGCACACACGCGGTaGCTGCAGCCCCGGCACACG +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGWAHTR*LQPRHT
Trigger: CGTGTGCCGGGGCTGCAGCCACCGCGTGTGTGCCCA...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACATTTGGGATCCTCTTaGTTGAGAGGTTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQHLGSS*LRGFRI
Trigger: TATTCTGAAACCTCTCAATCAAGAGGATCCCAAATG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAAGGAACCCCAGCACCTaGTGGCAGCGCGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPRNPST*WQRAQH
Trigger: GTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRTPAAT*NLEAFM
Trigger: CATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGGGACAGGGCCGCAGATaGAGACTGCTCAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRGQGRR*RLLKVK
Trigger: TTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCC...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGGCCACTGAAGACAAATaGGTGTTTCCACTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRATEDK*VFPLGA
Trigger: TGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGC...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGATGCCACACCGAGACCTaGAGCTGCCGGGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGCHTET*SCRVTS
Trigger: GCTGGTGACCCGGCAGCTGCAGGTCTCGGTGTGGCA...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACTCCAGCTGGGACCCTaGACCTGGTTCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPLQLGP*TWFVAP
Trigger: AGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAAACCCCAGCACCTGCTaGCAGCGCGCACAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPNPSTC*QRAQHF
Trigger: GAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAACCTCCAGAGAATATaGTACTGGGTGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRNLQRI*YWVPDW
Trigger: CCAGTCCGGCACCCAGTACCATATTCTCTGGAGGTT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCAGCAGGAACCATCATaGAAAGCTCAGCCCGTTCAA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRQQEPS*KAQPVQ
Trigger: TTGAACGGGCTGAGCTTTTCATGATGGTTCCTGCTG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAAGGAACACTCGGCACTaGGCACACACGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGRNTRH*AHTRWL
Trigger: CAGCCACCGCGTGTGTGCCCAGTGCCGAGTGTTCCT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACGTATTTCTCCGCCTTaGCCCGGAGCGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGRISPP*PGADAS
Trigger: GCTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAGCTCTCCATTACTCTaGGGAACGCTGTCTTCGTAT +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRSSPLL*GTLSSY
Trigger: ATACGAAGACAGCGTTCCTCAGAGTAATGGAGAGCT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGACAGCCCTTAACAAATaGGTTCAAGGTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRTALNK*VQGAIW
Trigger: CCAGATGGCACCTTGAACTCATTTGTTAAGGGCTGT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCCCGTGGCGAGAAGATaGTTCTCAGAAGTCATATCA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRPVARR*FSEVIS
Trigger: TGATATGACTTCTGAGAAGCATCTTCTCGCCACGGG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCTGGAAAGGACTTTCTaGCACTGGAGCTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRLERTF*HWSFDS
Trigger: ACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGTCTTGCGCTTTCCCTaGGAGGATCTGTCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPVLRFP*EDLSGN
Trigger: GTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGAC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACTGCCTCAGCTGAGCTaGGGTTACGCCACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPLPQLS*GYATED
Trigger: GTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAGGACTTTCTGCCACTaGAGCTTCGATAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRRTFCH*SFDSEH
Trigger: ATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGACTGCAATTCACCGCTaGTTCCGAGTATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRTAIHR*FRVFFL
Trigger: GAGAAAGAATACTCGGAATCAGCGGTGAATTGCAGT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAATATCTGGTGCACTaGCCTTCCTGCCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPEYLVH*PSCQDC
Trigger: GCAGTCCTGGCAGGAAGGTCAGTGCACCAGATATTC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTCTCTGAAAGATCACTaGAATTCACCGCTGATTCCG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRSLKDH*NSPLIP
Trigger: CGGAATCAGCGGTGAATTGCAGTGATCTTTCAGAGA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCATCTCGGTACAGGACCTaGAGAATGGCCTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPSRYRT*RMASRS
Trigger: AGAACGCGAGGCCATTCTCCAGGTCCTGTACCGAGA...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGTGCACTTCCAGGCATaGGTCCCCCTCAGGAACACT +
Preference number: 4 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRVHFQA*VPLRNT
Trigger: AGTGTTCCTGAGGGGGACCCATGCCTGGAAGTGCAC...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAACCGCAGTGTCAGACTaGCTCCGTCTCTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPTAVSD*LRLSVC
Trigger: ACAGACAGAGAGACGGAGCCAGTCTGACACTGCGGT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGGCACAGGTAAATTCTTaGCTCCTAGCACTACCAAAC +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRAQVNS*LLALPN
Trigger: GTTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGC...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGATCCTCCTCTGTGTTTTaGACCGCCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGSSSVF*TAWSRY
Trigger: GTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGA...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTGGGATCCTCTTGATTaGGAGGTTTCAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRWDPLD*EVSEYL
Trigger: CAGATATTCTGAAACCTCTCAATCAAGAGGATCCCA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGGGAGCCTTCGCATCTaGTTCAAGAGAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPGSLRI*FKRRDQ
Trigger: CTGGTCTCTTCTCTTGAAGCAGATGCGAAGGCTCCC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000367081.7
CDS-3UTR GCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACAAATTCCTGTAACCTaGCAGGACTGCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPQIPVT*QDCGCT
Trigger: AGTGCAGCCGCAGTCCTGGCAGGTTACAGGAATTTG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAAGCCCGTTCAATACCTaGCTGGGCTGGTACCTGACT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGSPFNT*LGWYLT
Trigger: AGTCAGGTACCAGCCCAGCCAGGTATTGAACGGGCT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACCTCTTGGAGTTTTCTaGGCCGTGAAGGGAGAACCA +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPPLGVF*AVKGEP
Trigger: TGGTTCTCCCTTCACGGCCCAGAAAACTCCAAGAGG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCATTTGGGATCCTCTTaGTTGAGAGGTTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRHLGSS*LRGFRI
Trigger: TATTCTGAAACCTCTCAATCAAGAGGATCCCAAATG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGAGCATATCTCTTTTCTaGGGTTTCACCAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRSISLF*GFTRDC
Trigger: ACAATCTCTGGTGAAACCTCAGAAAAGAGATATGCT...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAACAGGACCTGGAGAATaGCCTCGCGTTCTAACTCCT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGTGPGE*PRVLTP
Trigger: AGGAGTTAGAACGCGAGGCCATTCTCCAGGTCCTGT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACAGAGAATATGGTACTaGGTGCCGGACTGGATGGGA +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGQRIWY*VPDWMG
Trigger: TCCCATCCAGTCCGGCACCCAGTACCATATTCTCTG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAAACCTCCAGAGAATATaGTACTGGGTGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRNLQRI*YWVPDW
Trigger: CCAGTCCGGCACCCAGTACCATATTCTCTGGAGGTT...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAAATGAGTGTTTCCACTaGGGGCAAGCCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGNECFH*GQACFL
Trigger: GAGGAAGCAGGCTTGCCCCCAGTGGAAACACTCATT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACCTTTGAACCAAGTCTaGTTCCTCCAAGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPPLNQV*FLQASG
Trigger: ACCGCTTGCTTGGAGGAACCAGACTTGGTTCAAAGG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGAGAGGACAAAGTTaGACAGGCGCTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPERGQS*TGAFSE
Trigger: TTCAGAGAAAGCGCCTGTTCAACTTTGTCCTCTCTC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTTCTCCGTTTTCGTTaGCCCAGGTTGGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLLRFR*PRLEEL
Trigger: AAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTGGGGTTACGCCACTaGAGACAAATGAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLGLRH*RQMSVS
Trigger: GGAAACACTCATTTGTCTTCAGTGGCGTAACCCCAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAATTCCAAAGAGGGCCTaGTCCCAGACAGTTAACTCC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGIPKRA*SQTVNS
Trigger: GGAGTTAACTGTCTGGGATCAGGCCCTCTTTGGAAT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACCTTTCCACCGGAGATaGTGCAGGTGTGTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGPFHRR*CRCVFS
Trigger: ACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGGATGGGAGATTCTGTTaGTTCAAAATAGGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRDGRFC*FKIGLV
Trigger: TACTAACCCTATTTTGAAGCAACAGAATCTCCCATC...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAAACAGGCGCTTTCTCTaGAAGATCACTGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPNRRFL*KITAIH
Trigger: GTGAATTGCAGTGATCTTTCAGAGAAAGCGCCTGTT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAACGTGGCCAGAGGAATaGTCACTTCTCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGTWPEE*SLLQET
Trigger: TGTTTCTTGGAGAAGTGATCATTCCTCTGGCCACGT...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGATTTCAGAATATCTGGTaGACTGACCTTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGFQNIW*TDLPAR
Trigger: CCTGGCAGGAAGGTCAGTGCACCAGATATTCTGAAA...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR TCA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAACTGCAATTCACCGCTaGTTCCGAGTATTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRTAIHR*FRVFFL
Trigger: GAGAAAGAATACTCGGAATCAGCGGTGAATTGCAGT...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACGCGTTCTAACTCCTTaGGAGCACTCAGATCTATTT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGRVLTP*EHSDLF
Trigger: AAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CCA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGATGTCTGTCCATAGATTaGGGCTGGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRCLSID*GWKGLS
Trigger: AGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACA...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACCTCTCCTATTTCACTaGCAACTGTTTTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGPLLFH*QLFCLW
Trigger: CCACAAGCAAAACAGTTGCCAGTGAAATAGGAGAGG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTCCAGTTTTTATTTTaGCATTCCTGTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLQFLF*HSCPRS
Trigger: GCTTCGAGGACAGGAATGTCAAAATAAAAACTGGAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR TCA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAAGCATATCTCTTTTCTaGGGTTTCACCAGAGATTGT +
Preference number: 4 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPSISLF*GFTRDC
Trigger: ACAATCTCTGGTGAAACCTCAGAAAAGAGATATGCT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR GCA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGAACCACAGAAATTTTaGTCAGCTTCTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGEPQKF*SASDKI
Trigger: AATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTC...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCGTATTTCTCCGCCTaGGCCCGGAGCGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: HLVRSPSADAQCLTPAATSYFSA*ARSGCQ
Trigger: CTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACGA...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp GGTGCACTGACCTTCCTGGTGGTGACGTTGACCGCAGTGTCAGACTaGCTCCGTCTCTCTGTCTGTCCCACACACTGCCTGGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GALTFLVVTLTAVSD*LRLSVCPTHCLGPV
Trigger: CACGGGCCCCAGGCAGTGTGTGGGACAGACAGAGAGACGGAGCCAGTCTGACACTGCGGTCAACGTCACCACCAGGAAGGTCAGTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CAA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTCGTATTTCTCCGCCTaGGCCCGGAGCGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTSYFSA*ARSGCQ
Trigger: CTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACGA...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp GCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTaGCTCACGCCTGCTGCAACCTGGAACCTTGAGGCCTTCATGTCA +
Preference number: 5 (lower is better)
Translates to: AGTLHLVRSPSADAQ*LTPAATWNLEAFMS
Trigger: TGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTTTCCTGGTGGTGACGTaGACCGCAGTGTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSFLVVT*TAVSDW
Trigger: CCAGTCTGACACTGCGGTCAACGTCACCACCAGGAA...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS GCA 90 bp AGGAACCCCAGCACCTGCTGGCAGCGCGCACAGCACTTCTCTTTGTaGTCCCAGTCCGTGTTCTTCGCTCCTTTCCACCGGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: RNPSTCWQRAQHFSL*SQSVFFAPFHRRCC
Trigger: GCAGCATCTCCGGTGGAAAGGAGCGAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTCCTCCTCTGTGTTTaGAACCGCCTGGTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLLLCV*NRLVSV
Trigger: TACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCACAGCACTTCTCTTaGTGCTCCCAGTCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAAQHFS*CSQSVF
Trigger: GAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGC...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCACAGCACTTCTCTTaGTGCTCCCAGTCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSAQHFS*CSQSVF
Trigger: GAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGC...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTCTTTGGACTCCAGTCTaGCGCTTTCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSLWTPV*RFPWED
Trigger: ATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAG...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTTTGGACTCCAGTCTaGCGCTTTCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLWTPV*RFPWED
Trigger: ATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCATCGTATTTCTCCGCCTaGGCCCGGAGCGGATGCCAG +
Preference number: 5 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPSYFSA*ARSGCQ
Trigger: CTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACGA...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTGCAACCTGGAACCTaGAGGCCTTCATGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLQPGT*RPSCQC
Trigger: GCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp TTGGAAGAGCTTCACTGCATGGACCAAGCGCTCACGCCCTGCAGATaGGCGGCGGAGGCCAGCTGCAGCCAGCCTTGTTTAAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEELHCMDQALTPCR*AAEASCSQPCLKSS
Trigger: GGAGCTCTTTAAACAAGGCTGGCTGCAGCTGGCCTCCGCCGCTCATCTGCAGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp ATTTTGACATTCCTGTCCTCGAAGCACACCGTGCACTTCCAGGCATaGGTCCCCCTCAGGAACACTCGGCACTGGGCACACACGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ILTFLSSKHTVHFQA*VPLRNTRHWAHTRW
Trigger: CCACCGCGTGTGTGCCCAGTGCCGAGTGTTCCTGAGGGGGACCCATGCCTGGAAGTGCACGGTGTGCTTCGAGGACAGGAATGTCAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCTCCTCCTCTGTGTTTaGAACCGCCTGGTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTLLLCV*NRLVSV
Trigger: TACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAGCACAGCACTTCTCTTaGTGCTCCCAGTCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGAQHFS*CSQSVF
Trigger: GAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGC...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGAGTCCACGGTGTTCCTTaGGACTCCAGTCTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGVHGVP*DSSLAL
Trigger: AAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGAC...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACTGCAACCTGGAACCTaGAGGCCTTCATGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGLQPGT*RPSCQC
Trigger: GCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACAGCTGCAGCCAGCCTaGTTTAAAGAGCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGQLQPA*FKELPL
Trigger: GAGAGGGAGCTCTTTAAACAAGGCTGGCTGCAGCTG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp CGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATGTCAGTGCAGGACAAGAGTCATGTC +
Preference number: 5 (lower is better)
Translates to: RSPSADAQCLTPAAT*NLEAFMSVQDKSHV
Trigger: GACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp TTCTTCTCCGTTTTCGTTGACCCAGGTTGGAAGAGCTTCACTGCATaGACCAAGCGCTCACGCCCTGCAGATGAGCGGCGGAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: FFSVFVDPGWKSFTA*TKRSRPADERRRPA
Trigger: AGCTGGCCTCCGCCGCTCATCTGCAGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTCTTCTCCGTTTTCGTaGACCCAGGTTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPASSPFS*TQVGRA
Trigger: AGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCGCACAGGTAAATTCTaGGCTCCTAGCACTACCAAA +
Preference number: 5 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRRTGKF*APSTTK
Trigger: TTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGCG...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACAGTTAACTCCAAGCTaGACTGCCTCAGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGQLTPS*TASAEL
Trigger: CAGCTCAGCTGAGGCAGTCAAGCTTGGAGTTAACTG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAGCTGTGTCTCCCTTaGAACCAAGTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQLCLP*NQVWFL
Trigger: GAGGAACCAGACTTGGTTCAAAGGGAGACACAGCTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAAGAAGTTCTGCGTTaGTCGGAGTTACGGCTCGCA +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQEVLR*SELRLA
Trigger: TGCGAGCCGTAACTCCGACAAACGCAGAACTTCTTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCAGCTTCTGATAAGATaGCAAGAGCTGCCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPQLLIR*QELPSN
Trigger: GTTGGAGGGCAGCTCTTGCAATCTTATCAGAAGCTG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCGCACAGGTAAATTCTaGGCTCCTAGCACTACCAAA +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRRTGKF*APSTTK
Trigger: TTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGCG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCAGTCTCAGTTTTTGTaGGTCTGGCAGAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRQSQFL*VWQSET
Trigger: TGTCTCACTCTGCCAGACCAACAAAAACTGAGACTG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCCAGTCTCAGTTTTTGTaGGTCTGGCAGAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: HLVRSPSADAQCLTPAATQSQFL*VWQSET
Trigger: TGTCTCACTCTGCCAGACCAACAAAAACTGAGACTG...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCTTCAGTCTCAGTTTTaGTTGGTCTGGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRLQSQF*LVWQSE
Trigger: CTCACTCTGCCAGACCAACAAAAACTGAGACTGAAG...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTCTTCAGTCTCAGTTTTaGTTGGTCTGGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPALQSQF*LVWQSE
Trigger: CTCACTCTGCCAGACCAACAAAAACTGAGACTGAAG...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCATGTCTGTCCATAGATaGGGGCTGGAAAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: HLVRSPSADAQCLTPAATMSVHR*GLERTF
Trigger: GAAAGTCCTTTCCAGCCCCAATCTATGGACAGACAT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTATGTCTGTCCATAGATaGGGGCTGGAAAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAMSVHR*GLERTF
Trigger: GAAAGTCCTTTCCAGCCCCAATCTATGGACAGACAT...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACTGCAACCTGGAACCTaGAGGCCTTCATGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPLQPGT*RPSCQC
Trigger: GCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp TCTCCTGAAAGGTCGGGTCCACGGTGTTCCTTTGGACTCCAGTCTTaGGCTTTCCCTGGGAGGATCTGTCGGGCAACAGGTAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPERSGPRCSFGLQS*AFPGRICRATGRSS
Trigger: TGAAGACCTACCTGTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGACCCGACCTTTCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp GCCTCTTCCCTCCTTAGATCCAGGTTCCAGATGAACAGGCAGAACTaGCATCCCTCAGTGCCCCAAGGCTCTGAGTCTCTGAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: ASSLLRSRFQMNRQN*HPSVPQGSESLRED
Trigger: GTCCTCTCTCAGAGACTCAGAGCCTTGGGGCACTGAGGGATGCCAGTTCTGCCTGTTCATCTGGAACCTGGATCTAAGGAGGGAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000469735.1
ENST00000611299.5
CDS CCA 90 bp GCTCTCCATTACTCTGAGGAACGCTGTCTTCGTATTTCTCCGCCTTaGCCCGGAGCGGATGCCAGCGGAAGGACTGTGTTGTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: ALHYSEERCLRISPP*PGADASGRTVLCCL
Trigger: AAGACAGCACAACACAGTCCTTCCGCTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACGAAGACAGCGTTCCTCAGAGTAATGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTTCGCGTTCTAACTCCTaGAGAGCACTCAGATCTATT +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPASRSNS*RALRSI
Trigger: AATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGA...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCCCAACTGTCTCATGTTaGCCTCCAGTTGGAAATTTC +
Preference number: 5 (lower is better)
Translates to: HLVRSPSADAQCLTPAATPTVSC*PPVGNF
Trigger: GAAATTTCCAACTGGAGGCAAACATGAGACAGTTGG...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCGGATGGGAGATTCTGTaGCTTCAAAATAGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: LGPCTWFVAPLQTHSASRGWEIL*LQNRVS
Trigger: ACTAACCCTATTTTGAAGCAACAGAATCTCCCATCC...GCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGACGCACAGGTAAATTCTaGGCTCCTAGCACTACCAAA +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGRTGKF*APSTTK
Trigger: TTTGGTAGTGCTAGGAGCCAAGAATTTACCTGTGCG...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACAGTTAACTCCAAGCTaGACTGCCTCAGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPQLTPS*TASAEL
Trigger: CAGCTCAGCTGAGGCAGTCAAGCTTGGAGTTAACTG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTATGTCTGTCCATAGATaGGGGCTGGAAAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPMSVHR*GLERTF
Trigger: GAAAGTCCTTTCCAGCCCCAATCTATGGACAGACAT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp TGCAGGTGTGTTTTCAGTTTCCGTGTCCTCTCCTCCTCTGTGTTTTaGACCGCCTGGTCTCGGTACAGGACCTGGAGAATGGCCTCGCGT +
Preference number: 5 (lower is better)
Translates to: CRCVFSFRVLSSSVF*TAWSRYRTWRMASR
Trigger: ACGCGAGGCCATTCTCCAGGTCCTGTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAGAGGACACGGAAACTGAAAACACACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp CTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTaGGGCCTTCATGTCAGTGCAGGACAAGAGTCATGTCTGTCCATA +
Preference number: 5 (lower is better)
Translates to: LCRRTVPHACCNLEP*GLHVSAGQESCLSI
Trigger: TATGGACAGACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp GCCTCACGCCTGCTGCAACCTGGAACCTTGAGGCCTTCATGTCAGTaGAGGACAAGAGTCATGTCTGTCCATAGATTGGGGCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ASRLLQPGTLRPSCQ*RTRVMSVHRLGLER
Trigger: CCTTTCCAGCCCCAATCTATGGACAGACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp ACTGGCTCCGTCTCTCTGTCTGTCCCACACACTGCCTGGGGCCCGTaGCGAGAAGATGCTTCTCAGAAGTCATATCATTCTGGGATTTGG +
Preference number: 5 (lower is better)
Translates to: TGSVSLSVPHTAWGP*REDASQKSYHSGIW
Trigger: CCAAATCCCAGAATGATATGACTTCTGAGAAGCATCTTCTCGCCACGGGCCCCAGGCAGTGTGTGGGACAGACAGAGAGACGGAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS CCA 90 bp AGAATATCTGGTGCACTGACCTTCCTGCCAGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGTGGAGTAGGAGGAACCACAGAAATT +
Preference number: 5 (lower is better)
Translates to: RISGALTFLPGLRLH*LSLTGGGVGGTTEI
Trigger: AATTTCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGAAGGTCAGTGCACCAGATATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATCGCGTTCTAACTCCTaGAGAGCACTCAGATCTATT +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGSRSNS*RALRSI
Trigger: AATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCCAACTGTCTCATGTTaGCCTCCAGTTGGAAATTTC +
Preference number: 5 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTPTVSC*PPVGNF
Trigger: GAAATTTCCAACTGGAGGCAAACATGAGACAGTTGG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTGAGGGGATGGGAGATTCTGTaGCTTCAAAATAGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: APLQTHSASRLLQPGTLRGWEIL*LQNRVS
Trigger: ACTAACCCTATTTTGAAGCAACAGAATCTCCCATCC...CCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTCCAGTGACATTAGCATaGTCAAAATTGCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPAPVTLA*SKLPIS
Trigger: AGAGATGGGCAATTTTGACAATGCTAATGTCACTGG...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp TGGCTGATCTGTCCCTTCTTGAGCCTCTTGGAGTTTTCTGGGCCGTaGAGGGAGAACCAGCTTAGCCCGGACTGTGAGCTCTCCATTACT +
Preference number: 5 (lower is better)
Translates to: WLICPFLSLLEFSGP*RENQLSPDCELSIT
Trigger: AGTAATGGAGAGCTCACAGTCCGGGCTAAGCTGGTTCTCCCTTCACGGCCCAGAAAACTCCAAGAGGCTCAAGAAGGGACAGATCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp TCTTTGTGCTCCCAGTCCGTGTTCTTCGCTCCTTTCCACCGGAGATaGTGCAGGTGTGTTTTCAGTTTCCGTGTCCTCTCCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLCSQSVFFAPFHRR*CRCVFSFRVLSSSV
Trigger: CACAGAGGAGGAGAGGACACGGAAACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGGAGCGAAGAACACGGACTGGGAGCACAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp CTTCCTGCCAGGACTGCGGCTGCACTGGCTCTCGCTGACAGGAGGTaGAGTAGGAGGAACCACAGAAATTTTGCTCAGCTTCTGATAAGA +
Preference number: 5 (lower is better)
Translates to: LPARTAAALALADRR*SRRNHRNFAQLLIR
Trigger: TCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTACTCAGATCTATTTCTaGGGCCATTTCTTCTCCGTT +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPTQIYF*GHFFSV
Trigger: AACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGT...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCAGCTGGGATTAGCATTGTCAAAATaGCCCATCTCTGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: GTGPQMETAQGQRGLQLGLALSK*PISVQV
Trigger: CACCTGTACAGAGATGGGCAATTTTGACAATGCTAA...TCCCAGCTGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTCCAGTGACATTAGCATaGTCAAAATTGCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: TWFVAPLQTHSASRLLQPPVTLA*SKLPIS
Trigger: AGAGATGGGCAATTTTGACAATGCTAATGTCACTGG...AGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp TTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCCCAGTGACATTAGCATaGTCAAAATTGCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: FVAPLQTHSASRLLQPGTPVTLA*SKLPIS
Trigger: AGAGATGGGCAATTTTGACAATGCTAATGTCACTGG...GGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAAGGGGTCTCCACAGTCTCAGTTTTTGTaGGTCTGGCAGAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: KPWDRAADGDCSRSKGSPQSQFL*VWQSET
Trigger: TGTCTCACTCTGCCAGACCAACAAAAACTGAGACTG...TGGAGACCCCTTTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACAGTTAACTCCAAGCTaGACTGCCTCAGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQQLTPS*TASAEL
Trigger: CAGCTCAGCTGAGGCAGTCAAGCTTGGAGTTAACTG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp TTAACTCCAAGCTTGACTGCCTCAGCTGAGCTGGGGTTACGCCACTaGAGACAAATGAGTGTTTCCACTGGGGGCAAGCCTGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LTPSLTASAELGLRH*RQMSVSTGGKPASS
Trigger: TGAGGAAGCAGGCTTGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAGCTTGGAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp GTCATGTCTGTCCATAGATTGGGGCTGGAAAGGACTTTCTGCCACTaGAGCTTCGATAGTGAGCATGCATCCCCGCCAACAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VMSVHRLGLERTFCH*SFDSEHASPPTAVS
Trigger: AGACACAGCTGTTGGCGGGGATGCATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAACAGCTTCTGATAAGATaGCAAGAGCTGCCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQQLLIR*QELPSN
Trigger: GTTGGAGGGCAGCTCTTGCAATCTTATCAGAAGCTG...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTAGGTTCTTACAGGCCTaGATGCATATTTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: TLHLVRSPSADAQCLTPARFLQA*MHISKE
Trigger: TTCTTTAGAAATATGCATCAAGGCCTGTAAGAACCT...AGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp CACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCAGGTTCTTACAGGCCTaGATGCATATTTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: HLVRSPSADAQCLTPAATRFLQA*MHISKE
Trigger: TTCTTTAGAAATATGCATCAAGGCCTGTAAGAACCT...GGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp GGTCTCCAGCTGGGACCCTGCACCTGGTTCGTAGCCCCTCTGCAGACGCACAGTAGGTTCTTACAGGCCTaGATGCATATTTCTAAAGAA +
Preference number: 5 (lower is better)
Translates to: GLQLGPCTWFVAPLQTHSRFLQA*MHISKE
Trigger: TTCTTTAGAAATATGCATCAAGGCCTGTAAGAACCT...ACTGTGCGTCTGCAGAGGGGCTACGAACCAGGTGCAGGGTCCCAGCTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp CTCTCTGTCTGTCCCACACACTGCCTGGGGCCCGTGGCGAGAAGATaGTTCTCAGAAGTCATATCATTCTGGGATTTGGAGAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LSVCPTHCLGPVARR*FSEVISFWDLESFF
Trigger: GAAAAAGCTCTCCAAATCCCAGAATGATATGACTTCTGAGAAGCATCTTCTCGCCACGGGCCCCAGGCAGTGTGTGGGACAGACAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS GCA 90 bp ACAAGAGTCATGTCTGTCCATAGATTGGGGCTGGAAAGGACTTTCTaGCACTGGAGCTTCGATAGTGAGCATGCATCCCCGCCAACAGCT +
Preference number: 5 (lower is better)
Translates to: TRVMSVHRLGLERTF*HWSFDSEHASPPTA
Trigger: AGCTGTTGGCGGGGATGCATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACATGACTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp GAGCACTCAGATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTTaGCCCAGGTTGGAAGAGCTTCACTGCATGGACCAAGCGCTCACG +
Preference number: 5 (lower is better)
Translates to: EHSDLFLGPFLLRFR*PRLEELHCMDQALT
Trigger: CGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp GTTACGCCACTGAAGACAAATGAGTGTTTCCACTGGGGGCAAGCCTaGTTCCTCAGGACTGGCGACTTCAGTCTCAGTTTTTGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: VTPLKTNECFHWGQA*FLRTGDFSLSFCWS
Trigger: AGACCAACAAAAACTGAGACTGAAGTCGCCAGTCCTGAGGAAGCAGGCTTGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGCGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp ATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGGACCAAGCGCTCACGCCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: IYFLGHFFSVFVDPG*KSFTAWTKRSRPAD
Trigger: ATCTGCAGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp GGTCTCGGTACAGGACCTGGAGAATGGCCTCGCGTTCTAACTCCTTaGGAGCACTCAGATCTATTTCTTGGGCCATTTCTTCTCCGTTTT +
Preference number: 5 (lower is better)
Translates to: GLGTGPGEWPRVLTP*EHSDLFLGPFLLRF
Trigger: AAAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGAGGCCATTCTCCAGGTCCTGTACCGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp ATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGGACCAAGCGCTCACGCCCTTCCATT +
Preference number: 5 (lower is better)
Translates to: IYFLGHFFSVFVDPG*KSFTAWTKRSRPSI
Trigger: AATGGAAGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360448.8
CDS-3UTR CAA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAAATATCATTCTGGGATTaGGAGAGCTTTTTCACGTGG +
Preference number: 5 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQISFWD*ESFFTW
Trigger: CCACGTGAAAAAGCTCTCCAAATCCCAGAATGATAT...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTTCCTGGTGGTGACGTaGACCGCAGTGTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRFLVVT*TAVSDW
Trigger: CCAGTCTGACACTGCGGTCAACGTCACCACCAGGAA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CAA 90 bp AATAGGCGGTTAAGCCATGGGACAGGGCCGCAGATGGAGACTGCTCAAGGTCAATTAGCATTGTCAAAATaGCCCATCTCTGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: NRRLSHGTGPQMETAQGQLALSK*PISVQV
Trigger: CACCTGTACAGAGATGGGCAATTTTGACAATGCTAA...TTGACCTTGAGCAGTCTCCATCTGCGGCCCTGTCCCATGGCTTAACCGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 90 bp ATGGCCTCGCGTTCTAACTCCTTGAGAGCACTCAGATCTATTTCTTaGGCCATTTCTTCTCCGTTTTCGTTGACCCAGGTTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: MASRSNSLRALRSIS*AISSPFSLTQVGRA
Trigger: AGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGAGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCTCCTCCTCTGTGTTTaGAACCGCCTGGTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRLLLCV*NRLVSV
Trigger: TACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGGTCCACGGTGTTCCTTaGGACTCCAGTCTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRVHGVP*DSSLAL
Trigger: AAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGAC...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGCAGCTGCAGCCAGCCTaGTTTAAAGAGCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRQLQPA*FKELPL
Trigger: GAGAGGGAGCTCTTTAAACAAGGCTGGCTGCAGCTG...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS GCA 90 bp CTGAGAGAGGACAAAGTTGAACAGGCGCTTTCTCTGAAAGATCACTaGAATTCACCGCTGATTCCGAGTATTCTTTCTCATTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: LREDKVEQALSLKDH*NSPLIPSILSHSGS
Trigger: GCTCCCCGAATGAGAAAGAATACTCGGAATCAGCGGTGAATTGCAGTGATCTTTCAGAGAAAGCGCCTGTTCAACTTTGTCCTCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000469735.1
ENST00000611299.5
CDS CCA 90 bp GTGTCTAAAACCTCCAGAGAATATGGTACTGGGTGCCGGACTGGATaGGAGATTCTGTTGCTTCAAAATAGGGTTAGTAGAGCATTTGGG +
Preference number: 5 (lower is better)
Translates to: VSKTSREYGTGCRTG*EILLLQNRVSRAFG
Trigger: CCCAAATGCTCTACTAACCCTATTTTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTACCATATTCTCTGGAGGTTTTAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTCTTCTCCGTTTTCGTaGACCCAGGTTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRSSPFS*TQVGRA
Trigger: AGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGAGGCTTAGGTCGCGTTCTAACTCCTaGAGAGCACTCAGATCTATT +
Preference number: 5 (lower is better)
Translates to: KSGHFLHLKEEITHQRLRSRSNS*RALRSI
Trigger: AATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGA...CCTAAGCCTCTGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 90 bp TTCTGTTGCTTCAAAATAGGGTTAGTAGAGCATTTGGGATCCTCTTaGTTGAGAGGTTTCAGAATATCTGGTGCACTGACCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: FCCFKIGLVEHLGSS*LRGFRISGALTFLV
Trigger: CACCAGGAAGGTCAGTGCACCAGATATTCTGAAACCTCTCAATCAAGAGGATCCCAAATGCTCTACTAACCCTATTTTGAAGCAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS TCA 90 bp TTCTGTTGCTTCAAAATAGGGTTAGTAGAGCATTTGGGATCCTCTTaGTTGAGAGGTTTCAGAATATCTGGTGCACTGACCTTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: FCCFKIGLVEHLGSS*LRGFRISGALTFLP
Trigger: TGGCAGGAAGGTCAGTGCACCAGATATTCTGAAACCTCTCAATCAAGAGGATCCCAAATGCTCTACTAACCCTATTTTGAAGCAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CAA 90 bp ACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGACTTTGGACTCCAGTCTaGCGCTTTCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: TWVTTFIKIWPFSTSQRGLWTPV*RFPWED
Trigger: ATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAG...TCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACAGCTGTGTCTCCCTTaGAACCAAGTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPQLCLP*NQVWFL
Trigger: GAGGAACCAGACTTGGTTCAAAGGGAGACACAGCTG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCACAGCTTCTGATAAGATaGCAAGAGCTGCCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPQLLIR*QELPSN
Trigger: GTTGGAGGGCAGCTCTTGCAATCTTATCAGAAGCTG...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGACAGCTGTGTCTCCCTTaGAACCAAGTCTGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRQLCLP*NQVWFL
Trigger: GAGGAACCAGACTTGGTTCAAAGGGAGACACAGCTG...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CAA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGATCTTCTCCGTTTTCGTaGACCCAGGTTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRSSPFS*TQVGRA
Trigger: AGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGA...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS-3UTR CAA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAATATCATTCTGGGATTaGGAGAGCTTTTTCACGTGG +
Preference number: 5 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPISFWD*ESFFTW
Trigger: CCACGTGAAAAAGCTCTCCAAATCCCAGAATGATAT...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS-3UTR CAA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCAGGATGGGAGATTCTGTaGCTTCAAAATAGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPGWEIL*LQNRVS
Trigger: ACTAACCCTATTTTGAAGCAACAGAATCTCCCATCC...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp ACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAGGAGATAACCCACCATTAGCATTGTCAAAATaGCCCATCTCTGTACAGGTG +
Preference number: 5 (lower is better)
Translates to: TFIKIWPFSTSQRGDNPPLALSK*PISVQV
Trigger: CACCTGTACAGAGATGGGCAATTTTGACAATGCTAA...TGGTGGGTTATCTCCTCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS-3UTR CAA 90 bp AGGACATGGGTAACAACGTTTATTAAAATCTGGCCATTTTCTACATCTCAAAGAACTCAGATCTATTTCTaGGGCCATTTCTTCTCCGTT +
Preference number: 5 (lower is better)
Translates to: RTWVTTFIKIWPFSTSQRTQIYF*GHFFSV
Trigger: AACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGT...TCTTTGAGATGTAGAAAATGGCCAGATTTTAATAAACGTTGTTACCCATGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS GCA 72 bp TCAGGAACACTCGGCACTGGGCACACACGCGGTGGCTaGAGCCCCGGCACACGGCGCCCCGGTGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SGTLGTGHTRGG*SPGTRRPGAAG
Trigger: TCCTGCTGCACCGGGGCGCCGTGTGCCGGGGCTGCAGCCACCGCGTGTGTGCCCAGTGCCGAGTGTTCCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp CACACGGCGCCCCGGTGCAGCAGGAACCCCAGCACCTaGTGGCAGCGCGCACAGCACTTCTCTTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: HTAPRCSRNPST*WQRAQHFSLCS
Trigger: GGAGCACAAAGAGAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCTGCTGCACCGGGGCGCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp GGTGCACTGACCTTCCTGCCAGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGTGGAGTAGGAGGAACC +
Preference number: 6 (lower is better)
Translates to: GALTFLPGLRLH*LSLTGGGVGGT
Trigger: GGTTCCTCCTACTCCACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGAAGGTCAGTGCACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS TCA 72 bp CTTCACTGCATGGACCAAGCGCTCACGCCCTGCAGATaGGCGGCGGAGGCCAGCTGCAGCCAGCCTTGTTTA +
Preference number: 6 (lower is better)
Translates to: LHCMDQALTPCR*AAEASCSQPCL
Trigger: TAAACAAGGCTGGCTGCAGCTGGCCTCCGCCGCTCATCTGCAGGGCGTGAGCGCTTGGTCCATGCAGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp TTCCTGTCCTCGAAGCACACCGTGCACTTCCAGGCATaGGTCCCCCTCAGGAACACTCGGCACTGGGCACAC +
Preference number: 6 (lower is better)
Translates to: FLSSKHTVHFQA*VPLRNTRHWAH
Trigger: GTGTGCCCAGTGCCGAGTGTTCCTGAGGGGGACCCATGCCTGGAAGTGCACGGTGTGCTTCGAGGACAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp AGCAGGAACCCCAGCACCTGCTGGCAGCGCGCACAGCACTTCTCTTaGTGCTCCCAGTCCGTGTTCTTCGCTCCTTTCCACCGGAGATGC +
Preference number: 6 (lower is better)
Translates to: SRNPSTCWQRAQHFS*CSQSVFFAPFHRRC
Trigger: GCATCTCCGGTGGAAAGGAGCGAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGGGTTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp AGCTCAGCCCGTTCAATACCTGGCTGGGCTGGTACCTaGCTATGCCAGCAGGGGCAACGCCTCTTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSARSIPGWAGT*LCQQGQRLFPP
Trigger: AGGAGGGAAGAGGCGTTGCCCCTGCTGGCATAGTCAGGTACCAGCCCAGCCAGGTATTGAACGGGCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000469735.1
ENST00000611299.5
CDS CAA 72 bp CCCAGCACCTGCTGGCAGCGCGCACAGCACTTCTCTTaGTGCTCCCAGTCCGTGTTCTTCGCTCCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: PSTCWQRAQHFS*CSQSVFFAPFH
Trigger: GTGGAAAGGAGCGAAGAACACGGACTGGGAGCACAAAGAGAAGTGCTGTGCGCGCTGCCAGCAGGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp AGGTCGGGTCCACGGTGTTCCTTTGGACTCCAGTCTTaGGCTTTCCCTGGGAGGATCTGTCGGGCAACAGGT +
Preference number: 6 (lower is better)
Translates to: RSGPRCSFGLQS*AFPGRICRATG
Trigger: ACCTGTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGACCCGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp CCAAATTCCTGTAACCTGCCAGGACTGCGGCTGCACTaGCTCTCGCTGACAGGAGGTGGAGTAGGAGGAACC +
Preference number: 6 (lower is better)
Translates to: PNSCNLPGLRLH*LSLTGGGVGGT
Trigger: GGTTCCTCCTACTCCACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCCTGGCAGGTTACAGGAATTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS CCA 72 bp ACCTTCCTGGTGGTGACGTTGACCGCAGTGTCAGACTaGCTCCGTCTCTCTGTCTGTCCCACACACTGCCTG +
Preference number: 6 (lower is better)
Translates to: TFLVVTLTAVSD*LRLSVCPTHCL
Trigger: CAGGCAGTGTGTGGGACAGACAGAGAGACGGAGCCAGTCTGACACTGCGGTCAACGTCACCACCAGGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS CCA 72 bp GTTTTCGTTGACCCAGGTTGGAAGAGCTTCACTGCATaGACCAAGCGCTCACGCCCTGCAGATGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VFVDPGWKSFTA*TKRSRPADERR
Trigger: CCGCCGCTCATCTGCAGGGCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp AAGGTCGGGTCCACGGTGTTCCTTTGGACTCCAGTCTaGCGCTTTCCCTGGGAGGATCTGTCGGGCAACAGG +
Preference number: 6 (lower is better)
Translates to: KVGSTVFLWTPV*RFPWEDLSGNR
Trigger: CCTGTTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGACCCGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp GCTCACGCCCTGCAGATGAGCGGCGGAGGCCAGCTGCAGCCAGCCTaGTTTAAAGAGCTCCCTCTCCTATTTCACTGGCAACTGTTTTGC +
Preference number: 6 (lower is better)
Translates to: AHALQMSGGGQLQPA*FKELPLLFHWQLFC
Trigger: GCAAAACAGTTGCCAGTGAAATAGGAGAGGGAGCTCTTTAAACAAGGCTGGCTGCAGCTGGCCTCCGCCGCTCATCTGCAGGGCGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp TACTCTGAGGAACGCTGTCTTCGTATTTCTCCGCCTTaGCCCGGAGCGGATGCCAGCGGAAGGACTGTGTTG +
Preference number: 6 (lower is better)
Translates to: YSEERCLRISPP*PGADASGRTVL
Trigger: CAACACAGTCCTTCCGCTGGCATCCGCTCCGGGCCAAGGCGGAGAAATACGAAGACAGCGTTCCTCAGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp TCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTaGAACCTTGAGGCCTTCATGTCAGTGCAGGACAAG +
Preference number: 6 (lower is better)
Translates to: SADAQCLTPAAT*NLEAFMSVQDK
Trigger: CTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp CTGCAGGTGTGTTTTCAGTTTCCGTGTCCTCTCCTCCTCTGTGTTTaGAACCGCCTGGTCTCGGTACAGGACCTGGAGAATGGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: LQVCFQFPCPLLLCV*NRLVSVQDLENGLA
Trigger: CGCGAGGCCATTCTCCAGGTCCTGTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAGAGGACACGGAAACTGAAAACACACCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp CCTCTGCAGACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTaGAGGCCTTCATGTCAGTGCAGGACAAGAGTCATGTCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: PLQTHSASRLLQPGT*RPSCQCRTRVMSVH
Trigger: ATGGACAGACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGTCTGCAGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp TGTCCCTTCTTGAGCCTCTTGGAGTTTTCTGGGCCGTaGAGGGAGAACCAGCTTAGCCCGGACTGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: CPFLSLLEFSGP*RENQLSPDCEL
Trigger: GAGCTCACAGTCCGGGCTAAGCTGGTTCTCCCTTCACGGCCCAGAAAACTCCAAGAGGCTCAAGAAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp CGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTTaGGGCCTTCATGTCAGTGCAGGACAAGAGTCATGT +
Preference number: 6 (lower is better)
Translates to: RTVPHACCNLEP*GLHVSAGQESC
Trigger: ACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp CAAGGTCTCCTGAAAGGTCGGGTCCACGGTGTTCCTTaGGACTCCAGTCTTGCGCTTTCCCTGGGAGGATCT +
Preference number: 6 (lower is better)
Translates to: QGLLKGRVHGVP*DSSLALSLGGS
Trigger: AGATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGACCCGACCTTTCAGGAGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp ACGCACAGTGCCTCACGCCTGCTGCAACCTGGAACCTaGAGGCCTTCATGTCAGTGCAGGACAAGAGTCATG +
Preference number: 6 (lower is better)
Translates to: THSASRLLQPGT*RPSCQCRTRVM
Trigger: CATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAGGCGTGAGGCACTGTGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp CTGATACTTCAAGGTCTCCTGAAAGGTCGGGTCCACGGTGTTCCTTaGGACTCCAGTCTTGCGCTTTCCCTGGGAGGATCTGTCGGGCAA +
Preference number: 6 (lower is better)
Translates to: LILQGLLKGRVHGVP*DSSLALSLGGSVGQ
Trigger: TTGCCCGACAGATCCTCCCAGGGAAAGCGCAAGACTGGAGTCCAAAGGAACACCGTGGACCCGACCTTTCAGGAGACCTTGAAGTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp AGCTTGACTGCCTCAGCTGAGCTGGGGTTACGCCACTaGAGACAAATGAGTGTTTCCACTGGGGGCAAGCCT +
Preference number: 6 (lower is better)
Translates to: SLTASAELGLRH*RQMSVSTGGKP
Trigger: AGGCTTGCCCCCAGTGGAAACACTCATTTGTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp CAGTCCGTGTTCTTCGCTCCTTTCCACCGGAGATGCTaGAGGTGTGTTTTCAGTTTCCGTGTCCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QSVFFAPFHRRC*RCVFSFRVLSS
Trigger: GGAGGAGAGGACACGGAAACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGGAGCGAAGAACACGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp TCCCAGTCCGTGTTCTTCGCTCCTTTCCACCGGAGATaGTGCAGGTGTGTTTTCAGTTTCCGTGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SQSVFFAPFHRR*CRCVFSFRVLS
Trigger: GGAGAGGACACGGAAACTGAAAACACACCTGCAGCATCTCCGGTGGAAAGGAGCGAAGAACACGGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp AGGACTGCGGCTGCACTGGCTCTCGCTGACAGGAGGTaGAGTAGGAGGAACCACAGAAATTTTGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: RTAAALALADRR*SRRNHRNFAQL
Trigger: AAGCTGAGCAAAATTTCTGTGGTTCCTCCTACTCCACCTCCTGTCAGCGAGAGCCAGTGCAGCCGCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp AGAATATCTGGTGCACTGACCTTCCTGGTGGTGACGTaGACCGCAGTGTCAGACTGGCTCCGTCTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: RISGALTFLVVT*TAVSDWLRLSV
Trigger: GACAGAGAGACGGAGCCAGTCTGACACTGCGGTCAACGTCACCACCAGGAAGGTCAGTGCACCAGATATTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS TCA 72 bp CCTCCAAGCAAGCGGTCGTTCATTCCAAAGAGGGCCTaGTCCCAGACAGTTAACTCCAAGCTTGACTGCCTC +
Preference number: 6 (lower is better)
Translates to: PPSKRSFIPKRA*SQTVNSKLDCL
Trigger: GAGGCAGTCAAGCTTGGAGTTAACTGTCTGGGATCAGGCCCTCTTTGGAATGAACGACCGCTTGCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp GGGATCCTCTTGATTGAGAGGTTTCAGAATATCTGGTaGACTGACCTTCCTGCCAGGACTGCGGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: GILLIERFQNIW*TDLPARTAAAL
Trigger: CAGTGCAGCCGCAGTCCTGGCAGGAAGGTCAGTGCACCAGATATTCTGAAACCTCTCAATCAAGAGGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367081.7
CDS CCA 72 bp TTGGGCCATTTCTTCTCCGTTTTCGTTGACCCAGGTTaGAAGAGCTTCACTGCATGGACCAAGCGCTCACGC +
Preference number: 6 (lower is better)
Translates to: LGHFFSVFVDPG*KSFTAWTKRSR
Trigger: GCGTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp GTCCATAGATTGGGGCTGGAAAGGACTTTCTGCCACTaGAGCTTCGATAGTGAGCATGCATCCCCGCCAACA +
Preference number: 6 (lower is better)
Translates to: VHRLGLERTFCH*SFDSEHASPPT
Trigger: TGTTGGCGGGGATGCATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp GTTTTCAGTTTCCGTGTCCTCTCCTCCTCTGTGTTTTaGACCGCCTGGTCTCGGTACAGGACCTGGAGAATG +
Preference number: 6 (lower is better)
Translates to: VFSFRVLSSSVF*TAWSRYRTWRM
Trigger: CATTCTCCAGGTCCTGTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAGAGGACACGGAAACTGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp ATGTCTGTCCATAGATTGGGGCTGGAAAGGACTTTCTaGCACTGGAGCTTCGATAGTGAGCATGCATCCCCG +
Preference number: 6 (lower is better)
Translates to: MSVHRLGLERTF*HWSFDSEHASP
Trigger: CGGGGATGCATGCTCACTATCGAAGCTCCAGTGGCAGAAAGTCCTTTCCAGCCCCAATCTATGGACAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp CTGCTGCAACCTGGAACCTTGAGGCCTTCATGTCAGTaGAGGACAAGAGTCATGTCTGTCCATAGATTGGGG +
Preference number: 6 (lower is better)
Translates to: LLQPGTLRPSCQ*RTRVMSVHRLG
Trigger: CCCCAATCTATGGACAGACATGACTCTTGTCCTGCACTGACATGAAGGCCTCAAGGTTCCAGGTTGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp CTCCTTAGAAGAAGAAAGCCTCAAGAAGTTCTGCGTTaGTCGGAGTTACGGCTCGCAGAGCCTCGTGCTACC +
Preference number: 6 (lower is better)
Translates to: LLRRRKPQEVLR*SELRLAEPRAT
Trigger: GGTAGCACGAGGCTCTGCGAGCCGTAACTCCGACAAACGCAGAACTTCTTGAGGCTTTCTTCTTCTAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp TCCCAGACAGTTAACTCCAAGCTTGACTGCCTCAGCTaGGCTGGGGTTACGCCACTGAAGACAAATGAGTGT +
Preference number: 6 (lower is better)
Translates to: SQTVNSKLDCLS*AGVTPLKTNEC
Trigger: ACACTCATTTGTCTTCAGTGGCGTAACCCCAGCTCAGCTGAGGCAGTCAAGCTTGGAGTTAACTGTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp GGGATCCTCTTGATTGAGAGGTTTCAGAATATCTGGTaGACTGACCTTCCTGGTGGTGACGTTGACCGCAGT +
Preference number: 6 (lower is better)
Translates to: GILLIERFQNIW*TDLPGGDVDRS
Trigger: ACTGCGGTCAACGTCACCACCAGGAAGGTCAGTGCACCAGATATTCTGAAACCTCTCAATCAAGAGGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS CAA 72 bp TGTTTTCAGTTTCCGTGTCCTCTCCTCCTCTGTGTTTaGAACCGCCTGGTCTCGGTACAGGACCTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: CFQFPCPLLLCV*NRLVSVQDLEN
Trigger: ATTCTCCAGGTCCTGTACCGAGACCAGGCGGTTCAAAACACAGAGGAGGAGAGGACACGGAAACTGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp AGAGCACTCAGATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTaGACCCAGGTTGGAAGAGCTTCACTGCATGGACCAAGCGCTCAC +
Preference number: 6 (lower is better)
Translates to: RALRSISWAISSPFS*TQVGRASLHGPSAH
Trigger: GTGAGCGCTTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp CCATTTAAGATGTTTCCAGGTCAGCAGGAACCATCATaGAAAGCTCAGCCCGTTCAATACCTGGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: PFKMFPGQQEPS*KAQPVQYLAGL
Trigger: CAGCCCAGCCAGGTATTGAACGGGCTGAGCTTTTCATGATGGTTCCTGCTGACCTGGAAACATCTTAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000469735.1
ENST00000611299.5
CDS TCA 72 bp ACAGGACCTGGAGAATGGCCTCGCGTTCTAACTCCTTaGGAGCACTCAGATCTATTTCTTGGGCCATTTCTT +
Preference number: 6 (lower is better)
Translates to: TGPGEWPRVLTP*EHSDLFLGPFL
Trigger: AAGAAATGGCCCAAGAAATAGATCTGAGTGCTCTCAAGGAGTTAGAACGCGAGGCCATTCTCCAGGTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp ATGGTACTGGGTGCCGGACTGGATGGGAGATTCTGTTaGTTCAAAATAGGGTTAGTAGAGCATTTGGGATCC +
Preference number: 6 (lower is better)
Translates to: MVLGAGLDGRFC*FKIGLVEHLGS
Trigger: GGATCCCAAATGCTCTACTAACCCTATTTTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp GATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTTaGCCCAGGTTGGAAGAGCTTCACTGCATGGACCAA +
Preference number: 6 (lower is better)
Translates to: DLFLGPFLLRFR*PRLEELHCMDQ
Trigger: TTGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS GCA 72 bp TCCGTGTCTAAAACCTCCAGAGAATATGGTACTGGGTaGCGGACTGGATGGGAGATTCTGTTGCTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: SVSKTSREYGTG*RTGWEILLLQN
Trigger: ATTTTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTACCATATTCTCTGGAGGTTTTAGACACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp ACCTCCAGAGAATATGGTACTGGGTGCCGGACTGGATaGGAGATTCTGTTGCTTCAAAATAGGGTTAGTAGA +
Preference number: 6 (lower is better)
Translates to: TSREYGTGCRTG*EILLLQNRVSR
Trigger: TCTACTAACCCTATTTTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTACCATATTCTCTGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 72 bp AGATCTATTTCTTGGGCCATTTCTTCTCCGTTTTCGTaGACCCAGGTTGGAAGAGCTTCACTGCATGGACCA +
Preference number: 6 (lower is better)
Translates to: RSISWAISSPFS*TQVGRASLHGP
Trigger: TGGTCCATGCAGTGAAGCTCTTCCAACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CAA 90 bp TCCAGAGAATATGGTACTGGGTGCCGGACTGGATGGGAGATTCTGTaGCTTCAAAATAGGGTTAGTAGAGCATTTGGGATCCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: SREYGTGCRTGWEIL*LQNRVSRAFGILLI
Trigger: AATCAAGAGGATCCCAAATGCTCTACTAACCCTATTTTGAAGCAACAGAATCTCCCATCCAGTCCGGCACCCAGTACCATATTCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp CGTTCTAACTCCTTGAGAGCACTCAGATCTATTTCTTaGGCCATTTCTTCTCCGTTTTCGTTGACCCAGGTT +
Preference number: 6 (lower is better)
Translates to: RSNSLRALRSIS*AISSPFSLTQV
Trigger: AACCTGGGTCAACGAAAACGGAGAAGAAATGGCCCAAGAAATAGATCTGAGTGCTCTCAAGGAGTTAGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS CCA 72 bp GTGGCGAGAAGATGCTTCTCAGAAGTCATATCATTCTaGGATTTGGAGAGCTTTTTCACGTGGGTAGCAAGA +
Preference number: 6 (lower is better)
Translates to: VARRCFSEVISF*DLESFFTWVAR
Trigger: TCTTGCTACCCACGTGAAAAAGCTCTCCAAATCCCAGAATGATATGACTTCTGAGAAGCATCTTCTCGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS CAA 72 bp AGGAACCACAGAAATTTTGCTCAGCTTCTGATAAGATaGCAAGAGCTGCCCTCCAACTGTCTCATGTTTGCC +
Preference number: 6 (lower is better)
Translates to: RNHRNFAQLLIR*QELPSNCLMFA
Trigger: GGCAAACATGAGACAGTTGGAGGGCAGCTCTTGCAATCTTATCAGAAGCTGAGCAAAATTTCTGTGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5
CDS TCA 72 bp AACAAATTTTCCACGGACTTATTAAATCCTCTAAACTaGCCAAATTCCTGTAACCTGCCAGGACTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: NKFSTDLLNPLN*PNSCNLPGLRL
Trigger: CAGCCGCAGTCCTGGCAGGTTACAGGAATTTGGTCAGTTTAGAGGATTTAATAAGTCCGTGGAAAATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360448.8
ENST00000611299.5
CDS GCA 72 bp GACAAAGTTGAACAGGCGCTTTCTCTGAAAGATCACTaGAATTCACCGCTGATTCCGAGTATTCTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: DKVEQALSLKDH*NSPLIPSILSH
Trigger: ATGAGAAAGAATACTCGGAATCAGCGGTGAATTGCAGTGATCTTTCAGAGAAAGCGCCTGTTCAACTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000469735.1
ENST00000611299.5
CDS CAA 72 bp AATTCTATTTCTCCAGTGACATTAGCATTGTCAAAATaGCCCATCTCTGTACAGGTGCTGTCAATGCTAATT +
Preference number: 6 (lower is better)
Translates to: NSISPVTLALSK*PISVQVLSMLI
Trigger: AATTAGCATTGACAGCACCTGTACAGAGATGGGCAATTTTGACAATGCTAATGTCACTGGAGAAATAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360448.8
ENST00000367081.7
ENST00000611299.5