RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYTL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000137501

Ensembl transcript IDs: ENST00000316356.8, ENST00000354566.7, ENST00000359152.9, ENST00000389958.7, ENST00000389959.8, ENST00000389960.8, ENST00000438197.2, ENST00000524452.5, ENST00000524830.1, ENST00000524911.5, ENST00000525423.5, ENST00000525692.1, ENST00000525702.5, ENST00000526999.5, ENST00000527523.5, ENST00000527794.5, ENST00000528231.5, ENST00000528566.1, ENST00000529581.5, ENST00000530351.5, ENST00000532221.5, ENST00000532995.5, ENST00000533057.6, ENST00000533577.1, ENST00000533892.5, ENST00000534554.1, ENST00000634661.1

Found 1420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCT +
Preference number: 1 (lower is better)
Translates to: LPLSSGRSRHSFTQM*TSPVVGSFLPGTGS
Trigger: AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CCA 90 bp GCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTaGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTC +
Preference number: 1 (lower is better)
Translates to: ASIRSSGLNPSYTIV*LKIGLVVFPTALVF
Trigger: GAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR TCA 90 bp AGAGCTCGGGCTCTTCTTGTGTCTGCTGAGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCTGTCATCACTCTCATCTTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: RARALLVSAELVTAF*CCICFSVITLILEK
Trigger: TTTCTCCAAGATGAGAGTGATGACAGAGAAACAGATACAGCATCAGAAAGCAGTTACCAGCTCAGCAGACACAAGAAGAGCCCGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CCA 90 bp GATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGC +
Preference number: 1 (lower is better)
Translates to: DSTGLVVFSGGASGI*AHLEILAIKSILRG
Trigger: GCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR TCA 90 bp GTGGAATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTaGGAGGCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCA +
Preference number: 1 (lower is better)
Translates to: VEFGLIWKSWQSKAF*EAVLLQSKYWGSLP
Trigger: TGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR GCA 90 bp TCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SFGNLGNQKHSERQC*FNPSIGGVYHLLPE
Trigger: CTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CCA 90 bp TGGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACATTTAACA +
Preference number: 1 (lower is better)
Translates to: WLKIGLVVFPTALVF*RLFLLVSGRMVHLT
Trigger: TGTTAAATGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR TCA 90 bp GGCACTGTGGAAATTCTTGGTACGCATTCATTTGTAACTGGCTTCTaGTCTGGTTTCTCATCTACTCAGGAGGGCAACATTGAGAATAAA +
Preference number: 1 (lower is better)
Translates to: GTVEILGTHSFVTGF*SGFSSTQEGNIENK
Trigger: TTTATTCTCAATGTTGCCCTCCTGAGTAGATGAGAAACCAGATCAGAAGCCAGTTACAAATGAATGCGTACCAAGAATTTCCACAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CCA 90 bp ACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGGCAAT +
Preference number: 1 (lower is better)
Translates to: TQIFKIRFHRFSSFQ*RSQWNLGSFGNLGN
Trigger: ATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR GCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 2 (lower is better)
Translates to: AVLLQSKYWGSLPSSPRENLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTATGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 2 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CAA 90 bp TCAGGCCTGAACCCATCATACACCATAGTGTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTA +
Preference number: 2 (lower is better)
Translates to: SGLNPSYTIVWLKIG*VVFPTALVFWRLFL
Trigger: TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CAA 90 bp TCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SIRSSGLNPSYTIVW*KIGLVVFPTALVFW
Trigger: CCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR TCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 2 (lower is better)
Translates to: ARVPDPLNCGTELWCETHTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR CCA 90 bp TCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 2 (lower is better)
Translates to: SLQLLSSGDFSYLYLEGWAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...CCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CAA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTaGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: AVFRFRGYHLNCLFC*LSQSHVSKSSSTSP
Trigger: AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp AGGCCTGAACCCATCATACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 2 (lower is better)
Translates to: RPEPIIHHSVVEDRVGGFFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...AAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGAACTGGCTTCTGATCTaGTTTCTCATCTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVNWLLI*FLIYSG
Trigger: TCCTGAGTAGATGAGAAACCAGATCAGAAGCCAGTT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CAA 90 bp AAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATaGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: KGPARVPDPLNCGTE*WCETHDGKQEHFAS
Trigger: AGAAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR CAA 90 bp CAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGATGCCAAATGGACAGGTTCAATTTC +
Preference number: 2 (lower is better)
Translates to: QSHVSKSSSTSPRKL*RLNVSRCQMDRFNF
Trigger: GAAATTGAACCTGTCCATTTGGCATCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGAGGTGGAACTTGATTTGGAAACATGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CAA 90 bp GGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: GLVVFSGGASGIWAH*EILAIKSILRGSVA
Trigger: AGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CAA 90 bp AGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: RFHRFSSFQWRSQWN*GSFGNLGNQKHSER
Trigger: CCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 2 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
3UTR-3UTR GCA 90 bp TCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCAAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: SQTVSSTQASIRSSGLNPRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...TGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: QGLALGHTGELVSFHLCFFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: ARVPDPLNCGTELWCETHPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp ACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTGGCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 2 (lower is better)
Translates to: TQASIRSSGLNPSYTIVWHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...CCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR TCA 90 bp TTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 2 (lower is better)
Translates to: LVVFSGGASGIWAHLEILFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp AGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACTGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: SKLYTGFHQIFRPEPIIHCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...GTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAACTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLELVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: YKGPARVPDPLNCGTELWRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR GCA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp ATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 2 (lower is better)
Translates to: IWAHLEILAIKSILRGSVWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...AACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp TTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: FHRFSSFQWRSQWNLGSFSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...AAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp TTTGTAATGGTCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: FVMVPDSKLYTGFHQIFRPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...CCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGACCATTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: RVPDPLNCGTELWCETHDPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp TTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 2 (lower is better)
Translates to: LVVFSGGASGIWAHLEILTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp TTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 2 (lower is better)
Translates to: FSLQLLSSGDFSYLYLEGSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...TCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp GCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCTTCAACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: AHLEILAIKSILRGSVASTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...TGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR TCA 90 bp GCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCTTCAATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 2 (lower is better)
Translates to: AHLEILAIKSILRGSVASMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...TGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGACAGGTTTTCATCTTaGTTTCATCCATTCCTCACT +
Preference number: 2 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLEDRFSS*FHPFLT
Trigger: AGTGAGGAATGGATGAAAGCAAGATGAAAACCTGTC...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp TTTGTAATGGTCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 2 (lower is better)
Translates to: FVMVPDSKLYTGFHQIFRLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...CCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGACCATTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTGTCAGTTTCACAACTaGGACAGCAGAATACATCTG +
Preference number: 2 (lower is better)
Translates to: VAQNCGVKHMMANKNILLCQFHN*DSRIHL
Trigger: CAGATGTATTCTGCTGTCTCAGTTGTGAAACTGACA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 2 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCTACT +
Preference number: 2 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFVTGF*SGFSST
Trigger: AGTAGATGAGAAACCAGATCAGAAGCCAGTTACAAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 2 (lower is better)
Translates to: VAQNCGVKHMMANKNILLLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR GCA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLERLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: CGTELWCETHDGKQEHFAFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 2 (lower is better)
Translates to: VAQNCGVKHMMANKNILLFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: VAQNCGVKHMMANKNILLPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 3 (lower is better)
Translates to: ARVPDPLNCGTELWCETHEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR CAA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 3 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 3 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR GCA 72 bp AGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGG +
Preference number: 3 (lower is better)
Translates to: SSGRSRHSFTQM*TSPVVGSFLPG
Trigger: CCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp ACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTGGATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 3 (lower is better)
Translates to: TQASIRSSGLNPSYTIVWIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...CCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 3 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 3 (lower is better)
Translates to: ARVPDPLNCGTELWCETHIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR CCA 72 bp AGATCTTCAGGCCTGAACCCATCATACACCATAGTGTaGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCT +
Preference number: 3 (lower is better)
Translates to: RSSGLNPSYTIV*LKIGLVVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 3 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR TCA 72 bp GCTCTTCTTGTGTCTGCTGAGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCTGTCATCACTCTCATC +
Preference number: 3 (lower is better)
Translates to: ALLVSAELVTAF*CCICFSVITLI
Trigger: GATGAGAGTGATGACAGAGAAACAGATACAGCATCAGAAAGCAGTTACCAGCTCAGCAGACACAAGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR GCA 72 bp GCTGCTGCTAAGTCCTTACACTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCCACATATTCAATTGCA +
Preference number: 3 (lower is better)
Translates to: AAAKSLHWATKT*NSFSDSTYSIA
Trigger: TGCAATTGAATATGTGGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGCAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CCA 72 bp ATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTATCTGGAAGGATGGTA +
Preference number: 3 (lower is better)
Translates to: IGLVVFPTALVF*RLFLLVSGRMV
Trigger: TACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CAA 90 bp GCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCTTCAAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: AHLEILAIKSILRGSVASKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...TGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 3 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CCA 72 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAAT +
Preference number: 3 (lower is better)
Translates to: FKIRFHRFSSFQ*RSQWNLGSFGN
Trigger: ATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR GCA 72 bp CTGAGACAGCAGAATACATCTGACAGGTTTTCATCTTaGTTTCATCCATTCCTCACTGTGACTCTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: LRQQNTSDRFSS*FHPFLTVTLLH
Trigger: ATGAAGAAGAGTCACAGTGAGGAATGGATGAAAGCAAGATGAAAACCTGTCAGATGTATTCTGCTGTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR GCA 72 bp TCCCCTAGGAAACTATTGCGCTTAAATGTATCCCGATaGCAAATGGACAGGTTCAATTTCTGTGTCTTTAAG +
Preference number: 3 (lower is better)
Translates to: SPRKLLRLNVSR*QMDRFNFCVFK
Trigger: CTTAAAGACACAGAAATTGAACCTGTCCATTTGGCATCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR GCA 72 bp AATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGGGGAGTTTACCATCTT +
Preference number: 3 (lower is better)
Translates to: NLGNQKHSERQC*FNPSIGGVYHL
Trigger: AAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
3UTR-3UTR CAA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTCTCAGGAGGGCAACATaGAGAATAAATACCATTTTA +
Preference number: 3 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPLRRAT*RINTIL
Trigger: TAAAATGGTATTTATTCTCAATGTTGCCCTCCTGAG...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR TCA 72 bp AATGTCAGTTTCACAACTGAGACAGCAGAATACATCTaGCAGGTTTTCATCTTGCTTTCATCCATTCCTCAC +
Preference number: 3 (lower is better)
Translates to: NVSFTTETAEYI*QVFILLSSIPH
Trigger: GTGAGGAATGGATGAAAGCAAGATGAAAACCTGTCAGATGTATTCTGCTGTCTCAGTTGTGAAACTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR TCA 72 bp CTTACACTGGGCCACAAAAACATGCAACTCCTTCAGTaGCTCCACATATTCAATTGCAAACTGAATATTTCC +
Preference number: 3 (lower is better)
Translates to: LTLGHKNMQLLQ*LHIFNCKLNIS
Trigger: GGAAATATTCAGTTTGCAATTGAATATGTGGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCAGTGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR TCA 72 bp GACATGAAAGTAAAGCTCAAATGTCAGTTTCACAACTaGGACAGCAGAATACATCTGACAGGTTTTCATCTT +
Preference number: 3 (lower is better)
Translates to: DMKVKLKCQFHN*DSRIHLTGFHL
Trigger: AAGATGAAAACCTGTCAGATGTATTCTGCTGTCTCAGTTGTGAAACTGACATTTGAGCTTTACTTTCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTCTCCCGACGGACGCTaGCGGCACGGCCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGSPDGR*RHGPGV
Trigger: GACACCCGGGCCGTGCCGCCAGCGTCCGTCGGGAGA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389960.8
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCCCCAGCCCTCGGCCTaGCGGTGCAAACCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHPQPSA*RCKPRS
Trigger: GCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAACCCCGGGCAAGGCGTTaGGAGCCTTCACTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEPRARR*EPSLSR
Trigger: TCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGG...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCCCCAGCCCTCGGCCTaGCGGTGCAAACCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDPQPSA*RCKPRS
Trigger: GCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCCCCAGCCCTCGGCCTaGCGGTGCAAACCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWPQPSA*RCKPRS
Trigger: GCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCTCCCGACGGACGCTaGCGGCACGGCCCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSPDGR*RHGPGV
Trigger: GACACCCGGGCCGTGCCGCCAGCGTCCGTCGGGAGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389960.8
ENST00000527523.5
CDS-3UTR TCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTCTGCCACCTGGCACCTaGGATGGCTCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLLPPGT*DGSGST
Trigger: TGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAG...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCCCCGGGCAAGGCGTTaGGAGCCTTCACTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVPRARR*EPSLSR
Trigger: TCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAACTGGAGTTGCGCTTaGGGATCCCTCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELNWSCA*GSLSEP
Trigger: GGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCTGCCACCTGGCACCTaGGATGGCTCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWLPPGT*DGSGST
Trigger: TGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATCTGCCACCTGGCACCTaGGATGGCTCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNLPPGT*DGSGST
Trigger: TGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAG...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCTGCCACCTGGCACCTaGGATGGCTCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGLPPGT*DGSGST
Trigger: TGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAGCTCCTTGAGCCAGTaGCATAGCGGGAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLSSLSQ*HSGSSH
Trigger: ATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCCCCGGGCAAGGCGTTaGGAGCCTTCACTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLPRARR*EPSLSR
Trigger: TCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTCCCAAGAACCTGGTCTaGTCTGACTGTGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLPKNLV*SDCEDS
Trigger: GGAGTCCTCACAGTCAGAGCAGACCAGGTTCTTGGG...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAGTCCCTTGTCCCCCTaGAACCCCACTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLSPLSP*NPTFTV
Trigger: GACAGTGAAAGTGGGGTTGCAGGGGGACAAGGGACT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp GATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGGACCCATTTCAGCCCGGATaGAGCTCACATCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: DVHFSSCRKLFTRDWLWDPFQPG*SSHHCC
Trigger: GCAGCAGTGATGTGAGCTGCATCCGGGCTGAAATGG...GTCCCAGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAGCTCCTTGAGCCAGTaGCATAGCGGGAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNSSLSQ*HSGSSH
Trigger: ATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGTCTCTCTTGTCTTCTaGCCCCCAGCCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWVSLVF*PPALGL
Trigger: CAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGAC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCCAAAGCCAGGTTCCTaGAGAGTCCCTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHPKPGS*RVPCPP
Trigger: AGGGGGACAAGGGACTCTTCAGGAACCTGGCTTTGG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp TTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTAAGGTTGCTGTGAGCTaGGATCGTGCCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FHRFSSFQWRSQWNLGSFKVAVS*DRASLG
Trigger: GCCCAGGCTGGCACGATCTCAGCTCACAGCAACCTT...AAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELTRACW*CIFFWL
Trigger: GAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTGGGGCGCCAACTTGGCTTaGAAGGGAGAGGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TQASIRSSGLNPSYTIVWGANLA*KGEGEV
Trigger: AACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCC...CCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGTCTCTCTTGTCTTCTaGCCCCCAGCCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAVSLVF*PPALGL
Trigger: CAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGAC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTCTGGATTTACCACACTaGAACTCGGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLLDLPH*NSGLLV
Trigger: CACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAG...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCCTGGCTTTGGGGATTaGAGCCTTGATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWPGFGD*SLDLGP
Trigger: GGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNSRTAT*HLRWLR
Trigger: CCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAAGTGCTCTTTCCCATaGGGAAGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNKCSFP*GSPGLW
Trigger: CCACAGACCAGGACTTCCTCATGGGAAAGAGCACTT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATAAGTGCTCTTTCCCATaGGGAAGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNKCSFP*GSPGLW
Trigger: CCACAGACCAGGACTTCCTCATGGGAAAGAGCACTT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGATTTGGGACCCATTTaGAAGGCCTGGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLDLGPI*KAWQSL
Trigger: CAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAACTGGAGTTGCGCTTaGGGATCCCTCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGNWSCA*GSLSEP
Trigger: GGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAACTGGAGTTGCGCTTaGGGATCCCTCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQNWSCA*GSLSEP
Trigger: GGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGGCTTAGGGTCACTCTaGAACTCTTCTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGGLGSL*NSSVSP
Trigger: AGGGGACACAGAAGAGTTTCAGAGTGACCCTAAGCC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACTGGGTTCTTCTTCTaGACCTTGCTGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCETGFFF*TLLTVS
Trigger: AGAGACCGTCAGCAAGGTTCAGAAGAAGAACCCAGT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCGTCTGGGTGGAAGAATaGCTTTCTCTACAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPVWVEE*LSLQSP
Trigger: CGGAGACTGTAGAGAAAGTCATTCTTCCACCCAGAC...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCCAAAGCCAGGTTCCTaGAGAGTCCCTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCPKPGS*RVPCPP
Trigger: AGGGGGACAAGGGACTCTTCAGGAACCTGGCTTTGG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp TTTGTAATGGTCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCAAAGCCAGGTTCCTaGAGAGTCCCTTGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FVMVPDSKLYTGFHQIFRPKPGS*RVPCPP
Trigger: AGGGGGACAAGGGACTCTTCAGGAACCTGGCTTTGG...CCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGACCATTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGGCGAAGGTTGCTGTaGGCTGAGATCGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRRRLL*AEIVPA
Trigger: GGCTGGCACGATCTCAGCTCACAGCAACCTTCGCCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCGGGCTTGCTGGTGCTaGATCTTCTTCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVRACWC*IFFWLF
Trigger: GAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVTRACW*CIFFWL
Trigger: GAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACCATAGTGTGGTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TQASIRSSGLNPSYTIVWFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...CCACACTATGGTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCENLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGAGTCCCTTGTCCCCCTaGAACCCCACTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSPLSP*NPTFTV
Trigger: GACAGTGAAAGTGGGGTTGCAGGGGGACAAGGGACT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCAGCTCACATCACTaGTGCACACAGACTCCCAAG +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNCSSHH*CTQTPK
Trigger: CTTGGGAGTCTGTGTGCAGCAGTGATGTGAGCTGCA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000529581.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGGAAGTCCTGGTCTGTaGGATAGTGTCGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWGSPGL*DSVEKR
Trigger: CCTCTTCTCGACACTATCCCACAGACCAGGACTTCC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCENASQL*RKESIF
Trigger: AAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTGGATTTACCACACTaGAACTCGGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLDLPH*NSGLLV
Trigger: CACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCCTGGCTTTGGGGATTaGAGCCTTGATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHPGFGD*SLDLGP
Trigger: GGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGGACCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: DVHFSSCRKLFTRDWLWDLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...GTCCCAGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGAAAAAGCATATCTTaGGGAGGGCTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSGKSIS*GGLATS
Trigger: GGATGTGGCCAGCCCTCCCCAAGATATGCTTTTTCC...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389959.8
3UTR CAA 72 bp GAAGACAAGGACGTCATGCCAGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTCTTCTTGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EDKDVMPEELLR*VKELGLFLCLL
Trigger: CAGCAGACACAAGAAGAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTCTGGCATGACGTCCTTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTCAGGCAAATGTCTaGCTCTCTCTTCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWFQANV*LSLLRP
Trigger: GGGCCGAAGAAGAGAGAGTCAGACATTTGCCTGAAA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGTTTGTTGTGATGAGTaGCCTTCTGGCAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLVCCDE*PSGNLE
Trigger: CTCCAAGTTGCCAGAAGGTCACTCATCACAACAAAC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTCAGGCTCAACACAATaGGACAGTTCATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNSGSTQ*DSSSAG
Trigger: CCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGFRLAP*ASAIAG
Trigger: TCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGGATGCTGTATTCCTTaGCAAACAGGTCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLGCCIP*QTGRLF
Trigger: GAACAAGCGACCTGTTTGGCAAGGAATACAGCATCC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAGAGCAGCATCCCGCTaGAAAACCTTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDRAASR*KTFMMA
Trigger: GGCCATCATGAAGGTTTTGCAGCGGGATGCTGCTCT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTCTCTGTCTTTACTCTaGTCAGCTGCTATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGSLSLL*SAAIWG
Trigger: GCCCCAGATAGCAGCTGAGCAGAGTAAAGACAGAGA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCGGGCTTGCTGGTGCTaGATCTTCTTCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCRACWC*IFFWLF
Trigger: GAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGCTCCTTGAGCCAGTaGCATAGCGGGAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSSLSQ*HSGSSH
Trigger: ATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGCTCCTTGAGCCAGTaGCATAGCGGGAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISSLSQ*HSGSSH
Trigger: ATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGGTCGCTTGTTCCTATaGTGGCTTCCAGCACACTCA +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHGRLFL*WLPAHS
Trigger: TGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCCTGGCTTTGGGGATTaGAGCCTTGATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCPGFGD*SLDLGP
Trigger: GGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHPTSRP*ISPGLC
Trigger: ACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGGAAAAAGCATATCTTaGGGAGGGCTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDGKSIS*GGLATS
Trigger: GGATGTGGCCAGCCCTCCCCAAGATATGCTTTTTCC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCAGAAGTGGCTCGCCTaGGCTCCTCTGTACTACCTA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCQKWLA*APLYYL
Trigger: TAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGATGGCATTCAGAAGTaGCTCGCCTGGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGDGIQK*LAWAPL
Trigger: CAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp AGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACGAGATCGTGCCAGCCTaGGCAACAACAGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: SKLYTGFHQIFRPEPIIHEIVPA*ATTVKL
Trigger: GAGTTTCACTGTTGTTGCCCAGGCTGGCACGATCTC...GTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTTCAGGCAAATGTCTaGCTCTCTCTTCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFQANV*LSLLRP
Trigger: GGGCCGAAGAAGAGAGAGTCAGACATTTGCCTGAAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTTTCAGGCAAATGTCTaGCTCTCTCTTCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDFQANV*LSLLRP
Trigger: GGGCCGAAGAAGAGAGAGTCAGACATTTGCCTGAAA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNWGLEP*FGTHLK
Trigger: TTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAACTGGAGTTGCGCTTaGGGATCCCTCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHNWSCA*GSLSEP
Trigger: GGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGAAGGCTTTCTGTATTaGGAAGGCTTAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNEGFLY*EGLGSL
Trigger: GAGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTCAGGCTCAACACAATaGGACAGTTCATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSGSTQ*DSSSAG
Trigger: CCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACTGCCACCTGGCACCTaGGATGGCTCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGLPPGT*DGSGST
Trigger: TGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTCTTCTGAACCTTGCTaGCGGTCTCTAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHSSEPC*RSLELP
Trigger: TGGCAGTTCTAGAGACCGTCAGCAAGGTTCAGAAGA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGAGCACTTGTTTTCCATaGACTTTTCCACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQSTCFP*TFPPEG
Trigger: ACCCTCTGGTGGAAAAGTTCATGGAAAACAAGTGCT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTTGCAAGGGAGAGGGTaGAGTTCCAGTTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDLQGRG*SSSCFL
Trigger: AAGGAAGCAACTGGAACTTCACCCTCTCCCTTGCAA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFRLAP*ASAIAG
Trigger: TCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATAGAGCAGCATCCCGCTaGAAAACCTTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDRAASR*KTFMMA
Trigger: GGCCATCATGAAGGTTTTGCAGCGGGATGCTGCTCT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATGCTCTGATGATATCTaGGCCATGGATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCECSDDI*AMDFVP
Trigger: AGGGACAAAATCCATGGCGCAGATATCATCAGAGCA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTTTACTCTGCTCAGCTaGTATCTGGGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELFTLLS*YLGPLL
Trigger: AAGAAGAGGCCCCAGATAGCAGCTGAGCAGAGTAAA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTACTCTGCTCAGCTaGTATCTGGGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWFTLLS*YLGPLL
Trigger: AAGAAGAGGCCCCAGATAGCAGCTGAGCAGAGTAAA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTTACTCTGCTCAGCTaGTATCTGGGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGFTLLS*YLGPLL
Trigger: AAGAAGAGGCCCCAGATAGCAGCTGAGCAGAGTAAA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACGGGCTTGCTGGTGCTaGATCTTCTTCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGRACWC*IFFWLF
Trigger: GAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCGGGCTTGCTGGTGCTaGATCTTCTTCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGARACWC*IFFWLF
Trigger: GAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQTRACW*CIFFWL
Trigger: GAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGITRACW*CIFFWL
Trigger: GAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATACTGGAACTCGGGCTTaGTGGTGCTGCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDTGTRA*WCCIFF
Trigger: GAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCGCCAACTTGGCTTaGAAGGGAGAGGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLGANLA*KGEGEV
Trigger: AACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp GATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGGACGAATCAAATTCTGTGTaGTTAGCTGGCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: DVHFSSCRKLFTRDWLWDESNSV*LAGTHH
Trigger: GTGGTGAGTGCCAGCTAAGCACACAGAATTTGATTC...GTCCCAGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCCCAAGAACCTGGTCTaGTCTGACTGTGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLPKNLV*SDCEDS
Trigger: GGAGTCCTCACAGTCAGAGCAGACCAGGTTCTTGGG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGAAACACTCATCACACTaGCACTCACCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQKHSSH*HSPHLG
Trigger: TCCAAGATGAGGTGAGTGGCAGTGTGATGAGTGTTT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCCATTTCAGCCCGGATaGAGCTCACATCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIPFQPG*SSHHCC
Trigger: GCAGCAGTGATGTGAGCTGCATCCGGGCTGAAATGG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAGATGCAATGAGGGGTaGAACCAAGATGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDRCNEG*NQDVFP
Trigger: GGGGAAGACATCTTGGTTGCACCCCTCATTGCATCT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR GCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGCCGGGAGGCGAAGGTTaGTGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWPGGEG*CELRSC
Trigger: GCACGATCTCAGCTCACAGCAACCTTCGCCTCCCGG...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGCTCAGCTGCTATCTaGGGCCTCTTCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWCSAAI*GLFFLI
Trigger: TATGAGAAAGAAGAGGCCCCAGATAGCAGCTGAGCA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGCTCAGCTGCTATCTaGGGCCTCTTCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNCSAAI*GLFFLI
Trigger: TATGAGAAAGAAGAGGCCCCAGATAGCAGCTGAGCA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTGGATTTACCACACTaGAACTCGGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLDLPH*NSGLLV
Trigger: CACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTAGATCATCTTCCTaGCTTTGGGGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNCRSSS*LWGLEP
Trigger: AGGCTCCAATCCCCAAAGCCAGGAAGATGATCTACA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGACCTGGCACCTGAGATaGCTCAGGCTCAACACAATG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWTWHLR*LRLNTM
Trigger: CATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATACCTGGCACCTGAGATaGCTCAGGCTCAACACAATG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDTWHLR*LRLNTM
Trigger: CATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGASRTAT*HLRWLR
Trigger: CCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGSRTAT*HLRWLR
Trigger: CCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCCCTTTCTGGAAAGCTaGGAAGTTGGATCCAATGGA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWPFLES*EVGSNG
Trigger: TCCATTGGATCCAACTTCCCAGCTTTCCAGAAAGGG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTGTCCCCAAGAACCTaGTCTGCTCTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILSPRT*SALTVR
Trigger: CCTCACAGTCAGAGCAGACCAGGTTCTTGGGGACAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAACTGTCCCCAAGAACCTaGTCTGCTCTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQLSPRT*SALTVR
Trigger: CCTCACAGTCAGAGCAGACCAGGTTCTTGGGGACAG...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAGCCACATAAAGTTGTaGGGTTCTAGGGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLSHIKL*GSRDLN
Trigger: GTTGAGATCCCTAGAACCCCACAACTTTATGTGGCT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAAGTGCTCTTTCCCATaGGGAAGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLKCSFP*GSPGLW
Trigger: CCACAGACCAGGACTTCCTCATGGGAAAGAGCACTT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGAAGTGCTCTTTCCCATaGGGAAGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRKCSFP*GSPGLW
Trigger: CCACAGACCAGGACTTCCTCATGGGAAAGAGCACTT...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTTCAGGCAAATGTCTaGCTCTCTCTTCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDFQANV*LSLLRP
Trigger: GGGCCGAAGAAGAGAGAGTCAGACATTTGCCTGAAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGATTTGGGACCCATTTaGAAGGCCTGGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWDLGPI*KAWQSL
Trigger: CAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVWGLEP*FGTHLK
Trigger: TTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACATAACGAAGGGTTTCTaGGTCTGTGCTACTGGAACT +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNITKGF*VCATGT
Trigger: AGTTCCAGTAGCACAGACTCAGAAACCCTTCGTTAT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGCTTAGGGTCACTCTaGAACTCTTCTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGLGSL*NSSVSP
Trigger: AGGGGACACAGAAGAGTTTCAGAGTGACCCTAAGCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGGCTTAGGGTCACTCTaGAACTCTTCTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAGLGSL*NSSVSP
Trigger: AGGGGACACAGAAGAGTTTCAGAGTGACCCTAAGCC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGAAGGCTTTCTGTATTaGGAAGGCTTAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHEGFLY*EGLGSL
Trigger: GAGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGAAGGCTTTCTGTATTaGGAAGGCTTAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVEGFLY*EGLGSL
Trigger: GAGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATTCATTGATGGTTGGTaGATTCTCCATAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEFIDGW*ILHRLW
Trigger: CCACAGTCTATGGAGAATTCACCAACCATCAATGAA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTCAGGCTCAACACAATaGGACAGTTCATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSGSTQ*DSSSAG
Trigger: CCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCETCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTAGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAGCACTTGTTTTCCATaGACTTTTCCACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWSTCFP*TFPPEG
Trigger: ACCCTCTGGTGGAAAAGTTCATGGAAAACAAGTGCT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTTCCGAAATTTCCGTTTaGGAAGGGTGTACCCTAGCC +
Preference number: 4 (lower is better)
Translates to: FHRFSSFQWRSQWNLGSFSEISV*EGCTLA
Trigger: GGCTAGGGTACACCCTTCTCAAACGGAAATTTCGGA...AAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTATTTCTTCCACTTCCTaGGGGAGGCCTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: QGLALGHTGELVSFHLCFISSTS*GRPLPY
Trigger: ATATGGCAAAGGCCTCCCTCAGGAAGTGGAAGAAAT...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGAGGACTCCTTCTCGTaGGTTTCTTCTCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDEDSFS*VSSLTD
Trigger: GTCAGTGAGAGAAGAAACTCACGAGAAGGAGTCCTC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTTAGTCAAGATGCAATaGGGGGTGCAACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLVKMQ*GVQPRC
Trigger: ACATCTTGGTTGCACCCCTCATTGCATCTTGACTAA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTAGGCTCTCAGAAGGATaGTGTATTCCTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGRLSEG*CIPCQT
Trigger: TGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATAGAGCAGCATCCCGCTaGAAAACCTTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNRAASR*KTFMMA
Trigger: GGCCATCATGAAGGTTTTGCAGCGGGATGCTGCTCT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTCTGATGATATCTaGGCCATGGATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNCSDDI*AMDFVP
Trigger: AGGGACAAAATCCATGGCGCAGATATCATCAGAGCA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASTRACW*CIFFWL
Trigger: GAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAACTGGAACTCGGGCTTaGTGGTGCTGCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGTGTRA*WCCIFF
Trigger: GAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGACTGGAACTCGGGCTTaGTGGTGCTGCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRTGTRA*WCCIFF
Trigger: GAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGT...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACTGGAACTCGGGCTTaGTGGTGCTGCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTGTRA*WCCIFF
Trigger: GAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAACTCTTCTGTGTCCCCTaGATCTTCCATTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCELFCVP*IFHSIF
Trigger: AAAAATGGAATGGAAGATGCAGGGGACACAGAAGAG...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp GATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGGACCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: DVHFSSCRKLFTRDWLWDLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...GTCCCAGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAACTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCELILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTACATACTGGCTGTACTaGTTCAGGAAATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLTYWLY*FRKFWV
Trigger: AACCCAGAATTTCCTGAAGCAGTACAGCCAGTATGT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp TACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCCCTGAGGGAGGCCTTTaGCATATTGAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: YTIVWLKIGLVVFPTALVPEGGL*HIEQQW
Trigger: CCATTGTTGCTCAATATGGCAAAGGCCTCCCTCAGG...GACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTCCCAAGAACCTGGTCTaGTCTGACTGTGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPPKNLV*SDCEDS
Trigger: GGAGTCCTCACAGTCAGAGCAGACCAGGTTCTTGGG...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCAGTCCCTTGTCCCCCTaGAACCCCACTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSSPLSP*NPTFTV
Trigger: GACAGTGAAAGTGGGGTTGCAGGGGGACAAGGGACT...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATCTGGACACACTAATTaGTTCAGAAGCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCESGHTN*FRSLSK
Trigger: TTTGGAGAGGCTTCTGAAGCAATTAGTGTGTCCAGA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAAACACTCATCACACTaGCACTCACCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNKHSSH*HSPHLG
Trigger: TCCAAGATGAGGTGAGTGGCAGTGTGATGAGTGTTT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAAACACTCATCACACTaGCACTCACCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELKHSSH*HSPHLG
Trigger: TCCAAGATGAGGTGAGTGGCAGTGTGATGAGTGTTT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATGCAGCTCACATCACTaGTGCACACAGACTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQCSSHH*CTQTPK
Trigger: CTTGGGAGTCTGTGTGCAGCAGTGATGTGAGCTGCA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000529581.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGAGCACACTCACTCTCTaGTCCAGTCTTAGACACAGT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSTLTL*SSLRHS
Trigger: ACTGTGTCTAAGACTGGACCAGAGAGTGAGTGTGCT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGGTCGCTTGTTCCTATaGTGGCTTCCAGCACACTCA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNGRLFL*WLPAHS
Trigger: TGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGAAGTCCTGGTCTGTaGGATAGTGTCGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIGSPGL*DSVEKR
Trigger: CCTCTTCTCGACACTATCCCACAGACCAGGACTTCC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCNASQL*RKESIF
Trigger: AAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAACTGGATTTACCACACTaGAACTCGGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQLDLPH*NSGLLV
Trigger: CACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAG...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTGGATTTACCACACTaGAACTCGGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLDLPH*NSGLLV
Trigger: CACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCCTGGCTTTGGGGATTaGAGCCTTGATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASPGFGD*SLDLGP
Trigger: GGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTGTAGATCATCTTCCTaGCTTTGGGGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHCRSSS*LWGLEP
Trigger: AGGCTCCAATCCCCAAAGCCAGGAAGATGATCTACA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGSEILS*MVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLPTSRP*ISPGLC
Trigger: ACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIPTSRP*ISPGLC
Trigger: ACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACCTGGCACCTGAGATaGCTCAGGCTCAACACAATG +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTWHLR*LRLNTM
Trigger: CATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTACCTGGCACCTGAGATaGCTCAGGCTCAACACAATG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGITWHLR*LRLNTM
Trigger: CATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAACCTGGCACCTGAGATaGCTCAGGCTCAACACAATG +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQTWHLR*LRLNTM
Trigger: CATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCETALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTCTGTGTGCTTAGCTaGCACTCACCACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFCVLS*HSPLSA
Trigger: AGCTGAAAGTGGTGAGTGCCAGCTAAGCACACAGAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp AATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTGATGGCATTCAGAAGTaGCTCGCCTGGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NLGSFGNLGNQKHSERQCDGIQK*LAWAPL
Trigger: CAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATC...ACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATTTAATTCCTCAGGATaGCATTCAGAAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: QTVSSTQASIRSSGLNPSFNSSG*HSEVAR
Trigger: GCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAA...TGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp AGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGCTGTCCCCAAGAACCTaGTCTGCTCTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQWNLGSFGNLGNQKHSELSPRT*SALTVR
Trigger: CCTCACAGTCAGAGCAGACCAGGTTCTTGGGGACAG...CTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGAAGCCCCCGGAGTTaGAAGCAATTAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDGSPRS*KQLVKM
Trigger: CATCTTGACTAATTGCTTCCAACTCCGGGGGCTTCC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR CCA 90 bp GATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGGGACAACTGGCTTCTGATCTaGTTTCTCATCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: DVHFSSCRKLFTRDWLWDNWLLI*FLIYSG
Trigger: TCCTGAGTAGATGAGAAACCAGATCAGAAGCCAGTT...GTCCCAGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCAAAATTCTCAGGGCTaGACAACTAAGACTGCAACC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDQNSQG*TTKTAT
Trigger: GGTTGCAGTCTTAGTTGTTCAGCCCTGAGAATTTTG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGTTTGTTGTGATGAGTaGCCTTCTGGCAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWVCCDE*PSGNLE
Trigger: CTCCAAGTTGCCAGAAGGTCACTCATCACAACAAAC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGGATTTGGGACCCATTTaGAAGGCCTGGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRDLGPI*KAWQSL
Trigger: CAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATC...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGATTTGGGACCCATTTaGAAGGCCTGGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGADLGPI*KAWQSL
Trigger: CAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGCTTAGGGTCACTCTaGAACTCTTCTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASGLGSL*NSSVSP
Trigger: AGGGGACACAGAAGAGTTTCAGAGTGACCCTAAGCC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCAGGCTCAACACAATaGGACAGTTCATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISGSTQ*DSSSAG
Trigger: CCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCTTCTGAACCTTGCTaGCGGTCTCTAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSSEPC*RSLELP
Trigger: TGGCAGTTCTAGAGACCGTCAGCAAGGTTCAGAAGA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCTTCTGAACCTTGCTaGCGGTCTCTAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISSEPC*RSLELP
Trigger: TGGCAGTTCTAGAGACCGTCAGCAAGGTTCAGAAGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCACTGGGTTCTTCTTCTaGACCTTGCTGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGATGFFF*TLLTVS
Trigger: AGAGACCGTCAGCAAGGTTCAGAAGAAGAACCCAGT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACTGGGTTCTTCTTCTaGACCTTGCTGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTGFFF*TLLTVS
Trigger: AGAGACCGTCAGCAAGGTTCAGAAGAAGAACCCAGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACATGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: TALVFWRLFLLVSGRMVHESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...ATGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTGCAAGGGAGAGGGTaGAGTTCCAGTTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILQGRG*SSSCFL
Trigger: AAGGAAGCAACTGGAACTTCACCCTCTCCCTTGCAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp AGTTCCACCTCCCCTAGGAAACTATTGCGCTTAAATGTATCCCGATGCCAAATGGTTGGATCCAATGGATaGGAATCTTCTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SSTSPRKLLRLNVSRCQMVGSNG*ESSAAI
Trigger: GATGGCTGCAGAAGATTCTCATCCATTGGATCCAAC...CATTTGGCATCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGAGGTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTCCGAAATTTCCGTTTaGGAAGGGTGTACCCTAGCC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSEISV*EGCTLA
Trigger: GGCTAGGGTACACCCTTCTCAAACGGAAATTTCGGA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGTCTGGGTGGAAGAATaGCTTTCTCTACAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLEVWVEE*LSLQSP
Trigger: CGGAGACTGTAGAGAAAGTCATTCTTCCACCCAGAC...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCTAAGCGTCTGGTCTaGTGGAGACATTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGAKRLV*WRHLGS
Trigger: GCTGCCCAAATGTCTCCATCAGACCAGACGCTTAGC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTAGAGGACTCCTTCTCGTaGGTTTCTTCTCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLEDSFS*VSSLTD
Trigger: GTCAGTGAGAGAAGAAACTCACGAGAAGGAGTCCTC...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGAGGACTCCTTCTCGTaGGTTTCTTCTCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAEDSFS*VSSLTD
Trigger: GTCAGTGAGAGAAGAAACTCACGAGAAGGAGTCCTC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFRLAP*ASAIAG
Trigger: TCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAGAGCAGCATCCCGCTaGAAAACCTTCATGATGGCC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASRAASR*KTFMMA
Trigger: GGCCATCATGAAGGTTTTGCAGCGGGATGCTGCTCT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGTCCCTGTGCCTTTTTaGCTTGGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVVPVPF*LGFIKP
Trigger: TGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCTTCTTTCTCATAGATaGTCTGATGATATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWLLSHR*SDDICA
Trigger: GGCGCAGATATCATCAGAGCATCTATGAGAAAGAAG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTCTCTGTCTTTACTCTaGTCAGCTGCTATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRSLSLL*SAAIWG
Trigger: GCCCCAGATAGCAGCTGAGCAGAGTAAAGACAGAGA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTCTCTGTCTTTACTCTaGTCAGCTGCTATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSLSLL*SAAIWG
Trigger: GCCCCAGATAGCAGCTGAGCAGAGTAAAGACAGAGA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCTCTGTCTTTACTCTaGTCAGCTGCTATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISLSLL*SAAIWG
Trigger: GCCCCAGATAGCAGCTGAGCAGAGTAAAGACAGAGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCTCTGTCTTTACTCTaGTCAGCTGCTATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSLSLL*SAAIWG
Trigger: GCCCCAGATAGCAGCTGAGCAGAGTAAAGACAGAGA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: QGLALGHTGELVSFHLCFKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGGCCTGAACCCATCATACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPEPIIHHSVVEDRVGGFFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...AAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGAATCAAATTCTGTGTaGTTAGCTGGCACTCACCAC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDESNSV*LAGTHH
Trigger: GTGGTGAGTGCCAGCTAAGCACACAGAATTTGATTC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGATTTCTCCAGCTCTCTaGATTAGAACTGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELISPAL*IRTGVS
Trigger: GGAAACACCAGTTCTAATGCAGAGAGCTGGAGAAAT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGAGAAAGCACGGGGCTaGAACAGCCTCTCTATTCTT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAEKARG*NSLSIL
Trigger: AAGAATAGAGAGGCTGTTGCAGCCCCGTGCTTTCTC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389958.7
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTGCAGCTCACATCACTaGTGCACACAGACTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASCSSHH*CTQTPK
Trigger: CTTGGGAGTCTGTGTGCAGCAGTGATGTGAGCTGCA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCCATTTCAGCCCGGATaGAGCTCACATCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAPFQPG*SSHHCC
Trigger: GCAGCAGTGATGTGAGCTGCATCCGGGCTGAAATGG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGTGAGCTGAGATCGTaGCAGCCTGGGCAACAACAG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFACELRS*QPGQQQ
Trigger: CTGTTGTTGCCCAGGCTGGCACGATCTCAGCTCACA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAGCACACTCACTCTCTaGTCCAGTCTTAGACACAGT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSTLTL*SSLRHS
Trigger: ACTGTGTCTAAGACTGGACCAGAGAGTGAGTGTGCT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGTCGCTTGTTCCTATaGTGGCTTCCAGCACACTCA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASGRLFL*WLPAHS
Trigger: TGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGATGATATCTGCGCCATaGATTTTGTCCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVMISAP*ILSLCL
Trigger: AAGGCACAGGGACAAAATCCATGGCGCAGATATCAT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTGCTCAGCTGCTATCTaGGGCCTCTTCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCCSAAI*GLFFLI
Trigger: TATGAGAAAGAAGAGGCCCCAGATAGCAGCTGAGCA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTGCTCAGCTGCTATCTaGGGCCTCTTCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWCSAAI*GLFFLI
Trigger: TATGAGAAAGAAGAGGCCCCAGATAGCAGCTGAGCA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGANASQL*RKESIF
Trigger: AAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGINASQL*RKESIF
Trigger: AAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATAATCACACTGGAAGCTaGATTTACCACACTGGAACT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNNHTGS*IYHTGT
Trigger: AGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACATATCAATCACACTaGAAGCTGGATTTACCACAC +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCETYQSH*KLDLPH
Trigger: GTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCACATATCAATCACACTaGAAGCTGGATTTACCACAC +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPTYQSH*KLDLPH
Trigger: GTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATCCTGGCTTTGGGGATTaGAGCCTTGATTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHPGFGD*SLDLGP
Trigger: GGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGG...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSEILS*MVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFASRTAT*HLRWLR
Trigger: CCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCACTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQTVSSTQASIRSSGLNPLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...TGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: QGLALGHTGELVSFHLCFTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCAATACAGGTCTGGGTaGAAGAATGACTTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWQYRSG*KNDFLY
Trigger: GTAGAGAAAGTCATTCTTCCACCCAGACCTGTATTG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCACGAGGAACTCTGATTTaGGTTGAACAATTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QTVSSTQASIRSSGLNPSRGTLI*VEQLFP
Trigger: GGGAAACAATTGTTCAACCCAAATCAGAGTTCCTCG...TGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCCACTCACCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDPLTSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
3UTR CAA 72 bp AACCCATCATACACCATAGTGTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: NPSYTIVWLKIG*VVFPTALVFWR
Trigger: TCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
3UTR CAA 72 bp TCTTCAGGCCTGAACCCATCATACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSGLNPSYTIVW*KIGLVVFPTAL
Trigger: AAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTTGTTGTGATGAGTaGCCTTCTGGCAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLVCCDE*PSGNLE
Trigger: CTCCAAGTTGCCAGAAGGTCACTCATCACAACAAAC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGTTTGTTGTGATGAGTaGCCTTCTGGCAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPVCCDE*PSGNLE
Trigger: CTCCAAGTTGCCAGAAGGTCACTCATCACAACAAAC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATCCTCTTTTGAAGTCTaGAATAAACCAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCESSFEV*NKPVLP
Trigger: TGGAAGAACTGGTTTATTTCAGACTTCAAAAGAGGA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIWGLEP*FGTHLK
Trigger: TTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGAACTGGAGTTGCGCTTaGGGATCCCTCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLNWSCA*GSLSEP
Trigger: GGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATATAACGAAGGGTTTCTaGGTCTGTGCTACTGGAACT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDITKGF*VCATGT
Trigger: AGTTCCAGTAGCACAGACTCAGAAACCCTTCGTTAT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGAAGGCTTTCTGTATTaGGAAGGCTTAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGEGFLY*EGLGSL
Trigger: GAGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAAGGCTTTCTGTATTaGGAAGGCTTAGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLEGFLY*EGLGSL
Trigger: GAGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTATCTTTGGGTTCATTaGTGGTTGGTGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWYLWVH*WLVNSP
Trigger: TGGAGAATTCACCAACCATCAATGAACCCAAAGATA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTCAGGCTCAACACAATaGGACAGTTCATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASSGSTQ*DSSSAG
Trigger: CCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTCTTCTGAACCTTGCTaGCGGTCTCTAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASSSEPC*RSLELP
Trigger: TGGCAGTTCTAGAGACCGTCAGCAAGGTTCAGAAGA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: QTVSSTQASIRSSGLNPSLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...TGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGTTCCACCTCCCCTAGGAAACTATTGCGCTTAAATGTATCCCGATGCCAAATGTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: SSTSPRKLLRLNVSRCQMFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...CATTTGGCATCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGAGGTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCECKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGACTCAAAGGAAATGTaGTTTCATCTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVDSKEM*FHLVAP
Trigger: AGGTGCTACCAGATGAAATCACATTTCCTTTGAGTC...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTTCCACCAGAGGGTTaGATTGCTGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFPPEG*IAGVEV
Trigger: AACCTCAACACCAGCAATTCAACCCTCTGGTGGAAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCACTTTCAGCTTTCTTaGGGAGAGCTGTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHHFQLS*GELYFQ
Trigger: TTGGAAATACAGCTCTCCTCAAGAAAGCTGAAAGTG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGAATTCGAGGAACTCTaGTTTGGGTTGAACAATTGT +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNEFEEL*FGLNNC
Trigger: ACAATTGTTCAACCCAAATCAGAGTTCCTCGAATTC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCATTTCAGAGGTCTGTaGGGCTGCCCTGTAAAAATG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLHFRGL*GCPVKM
Trigger: CATTTTTACAGGGCAGCCTCACAGACCTCTGAAATG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCACTGGGTTCTTCTTCTaGACTGGAAGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCTGFFF*TGRISP
Trigger: TGGAGAAATCCTTCCAGTTCAGAAGAAGAACCCAGT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGATGCTGTATTCCTTaGCAAACAGGTCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIGCCIP*QTGRLF
Trigger: GAACAAGCGACCTGTTTGGCAAGGAATACAGCATCC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGGCTCTCAGAAGGATaGTGTATTCCTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRLSEG*CIPCQT
Trigger: TGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGTCCCTGTGCCTTTTTaGCTTGGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWVPVPF*LGFIKP
Trigger: TGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTGCTCTGATGATATCTaGGCCATGGATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCCSDDI*AMDFVP
Trigger: AGGGACAAAATCCATGGCGCAGATATCATCAGAGCA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTTACTCTGCTCAGCTaGTATCTGGGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFTLLS*YLGPLL
Trigger: AAGAAGAGGCCCCAGATAGCAGCTGAGCAGAGTAAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTACTGGAACTCGGGCTTaGTGGTGCTGCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLTGTRA*WCCIFF
Trigger: GAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAGGCCTGGCAAAGTCTaGTTTGATTTCTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWRPGKV*FDFSNF
Trigger: AAAGTTAGAGAAATCAAAGCAGACTTTGCCAGGCCT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCELNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: FSLQLLSSGDFSYLYLEGFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...TCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGASFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACTCTGGACACACTAATTaGTTCAGAAGCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKLYTGFHQIFRPEPIIHSGHTN*FRSLSK
Trigger: TTTGGAGAGGCTTCTGAAGCAATTAGTGTGTCCAGA...GTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGCACACTCACTCTCTaGTCCAGTCTTAGACACAGT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSTLTL*SSLRHS
Trigger: ACTGTGTCTAAGACTGGACCAGAGAGTGAGTGTGCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTGTGCCTTTTTGCCTTaGCTTCATAAAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDCAFLP*LHKTIG
Trigger: GCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCATGATATCTGCGCCATaGATTTTGTCCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCMISAP*ILSLCL
Trigger: AAGGCACAGGGACAAAATCCATGGCGCAGATATCAT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTGCTCAGCTGCTATCTaGGGCCTCTTCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPCSAAI*GLFFLI
Trigger: TATGAGAAAGAAGAGGCCCCAGATAGCAGCTGAGCA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTACATATCAATCACACTaGAAGCTGGATTTACCACAC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGTYQSH*KLDLPH
Trigger: GTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTTCCTTGTGTTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELFLVFS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAACACAAGGAA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTGTAGATCATCTTCCTaGCTTTGGGGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPCRSSS*LWGLEP
Trigger: AGGCTCCAATCCCCAAAGCCAGGAAGATGATCTACA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATGTAGATCATCTTCCTaGCTTTGGGGATTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGCRSSS*LWGLEP
Trigger: AGGCTCCAATCCCCAAAGCCAGGAAGATGATCTACA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVKFSHG*LGQVTQ
Trigger: TTGTGTCACCTGGCCTAACCATCCATGAGAGAATTT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAPTSRP*ISPGLC
Trigger: ACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTGCTTCAAGGGCAACTaGTGCTGTCTTCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLCFKGN*CCLPLQ
Trigger: CTGAAGCGGAAGACAGCACCAGTTGCCCTTGAAGCA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGCCTGAACCCATCATACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: RPEPIIHHSVVEDRVGGFGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...AAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: SLQLLSSGDFSYLYLEGWTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...CCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: AVLLQSKYWGSLPSSPRESYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCCCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FPLAVVDQGIPSPRCALLPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...GAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGCTTCAGGAAATTCTaGGTTCACTTCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLCFRKF*VHFSRT
Trigger: GGTCCTGGAGAAGTGAACCCAGAATTTCCTGAAGCA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATAAAATCCTTCCTGTCTaGAACTATGGTGTCCATCGT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHKILPV*NYGVHR
Trigger: ACGATGGACACCATAGTTCCAGACAGGAAGGATTTT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAATGAGCTAAGCGTCTaGTCTGATGGAGACATTTGG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWNELSV*SDGDIW
Trigger: CCAAATGTCTCCATCAGACCAGACGCTTAGCTCATT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTTAATTCCTCAGGATaGCATTCAGAAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWFNSSG*HSEVAR
Trigger: GCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGTTCTTCTTCTGAACTaGAAGGATTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVVLLLN*KDFSSS
Trigger: AGAGCTGGAGAAATCCTTCCAGTTCAGAAGAAGAAC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTTTTCAAAACAGGACTaGGTTCTTCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNFSKQD*VLLLNW
Trigger: CCAGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCCACTCACCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNPLTSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAACAAATGGTTAACATaGCTGACCCTTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWNKWLT*LTLGEK
Trigger: TTTCTCTCCAAGGGTCAGCCATGTTAACCATTTGTT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
3UTR CAA 72 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATaGTGGTGTGAAACACATGATGGCAAACAAGAACAT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTE*WCETHDGKQEH
Trigger: ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTCCTCTTTTGAAGTCTaGAATAAACCAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNSSFEV*NKPVLP
Trigger: TGGAAGAACTGGTTTATTTCAGACTTCAAAAGAGGA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTCCTCTTTTGAAGTCTaGAATAAACCAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNSSFEV*NKPVLP
Trigger: TGGAAGAACTGGTTTATTTCAGACTTCAAAAGAGGA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGATTTGGGACCCATTTaGAAGGCCTGGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLDLGPI*KAWQSL
Trigger: CAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASWGLEP*FGTHLK
Trigger: TTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTATAACGAAGGGTTTCTaGGTCTGTGCTACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIITKGF*VCATGT
Trigger: AGTTCCAGTAGCACAGACTCAGAAACCCTTCGTTAT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCTTCTGAACCTTGCTaGCGGTCTCTAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSSEPC*RSLELP
Trigger: TGGCAGTTCTAGAGACCGTCAGCAAGGTTCAGAAGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGAGAGCAACTTCCTCTaGAGTAGAGTCCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLESNFL*SRVHPV
Trigger: GACTGGATGGACTCTACTTCAGAGGAAGTTGCTCTC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTCCCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCGTTTAACCTTTGGATaGACTACTGTTTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: FPLAVVDQGIPSPRCALLRLTFG*TTVLST
Trigger: TGTTGACAAAACAGTAGTTCATCCAAAGGTTAAACG...GAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTTTCTCTCTTATCAGCTaGAGTATTGTGACTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVFSLIS*SIVTLF
Trigger: GAACAGAGTCACAATACTTCAGCTGATAAGAGAGAA...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCATCGTAGCCCATGGTaGTATCACTCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAHRSPW*YHSWRI
Trigger: AATCCTCCAGGAGTGATATCACCATGGGCTACGATG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACATCGTAGCCCATGGTaGTATCACTCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGHRSPW*YHSWRI
Trigger: AATCCTCCAGGAGTGATATCACCATGGGCTACGATG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTAGGAAGGCCTTTGCCATATTaGGCAACAATGGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SVCYPSPMFPNQVPPPLGRPLPY*ATMEAN
Trigger: ATTTGCTTCCATTGTTGCTCAATATGGCAAAGGCCT...TCCTAGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CAGGTTTTCATCTTGCTTTCATCCATTCCTCACTGTGACTCTTCTTCATTAGCCCATTTCAGAGGTCTGTaGGGCTGCCCTGTAAAAATG +
Preference number: 4 (lower is better)
Translates to: QVFILLSSIPHCDSSSLAHFRGL*GCPVKM
Trigger: CATTTTTACAGGGCAGCCTCACAGACCTCTGAAATG...GGCTAATGAAGAAGAGTCACAGTGAGGAATGGATGAAAGCAAGATGAAAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTCACATTGGTTGACTTaGGATTCCAAACCATTACTT +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNSHWLT*DSKPLL
Trigger: AAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACTGGGTTCTTCTTCTaGACTGGAAGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTGFFF*TGRISP
Trigger: TGGAGAAATCCTTCCAGTTCAGAAGAAGAACCCAGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAACTGGGTTCTTCTTCTaGACTGGAAGGATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQTGFFF*TGRISP
Trigger: TGGAGAAATCCTTCCAGTTCAGAAGAAGAACCCAGT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFRLAP*ASAIAG
Trigger: TCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAGTTTATTCTCTCTCTaGACCTGTCGTCAATTCATA +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELSLFSL*TCRQFI
Trigger: TATGAATTGACGACAGGTGCAGAGAGAGAATAAACT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATGCTGTATTCCTTaGCAAACAGGTCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASGCCIP*QTGRLF
Trigger: GAACAAGCGACCTGTTTGGCAAGGAATACAGCATCC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGGCTCTCAGAAGGATaGTGTATTCCTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRLSEG*CIPCQT
Trigger: TGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGTCCCTGTGCCTTTTTaGCTTGGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGVPVPF*LGFIKP
Trigger: TGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTTCTTTCTCATAGATaGTCTGATGATATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLLSHR*SDDICA
Trigger: GGCGCAGATATCATCAGAGCATCTATGAGAAAGAAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTTACTCTGCTCAGCTaGTATCTGGGGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASFTLLS*YLGPLL
Trigger: AAGAAGAGGCCCCAGATAGCAGCTGAGCAGAGTAAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCTCTTCTGTGTCCCCTaGATCTTCCATTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCLFCVP*IFHSIF
Trigger: AAAAATGGAATGGAAGATGCAGGGGACACAGAAGAG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTCACCTCTGTTTTCTaGTTCAAGGGCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASFTSVF*FKGNWC
Trigger: GCACCAGTTGCCCTTGAAGCAGAAAACAGAGGTGAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CAGGTTTTCATCTTGCTTTCATCCATTCCTCACTGTGACTCTTCTTCATTAGCCTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: QVFILLSSIPHCDSSSLASFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...GGCTAATGAAGAAGAGTCACAGTGAGGAATGGATGAAAGCAAGATGAAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFANLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATACATACTGGCTGTACTaGTTCAGGAAATTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDTYWLY*FRKFWV
Trigger: AACCCAGAATTTCCTGAAGCAGTACAGCCAGTATGT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCCTGAGGGAGGCCTTTaGCATATTGAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLPEGGL*HIEQQW
Trigger: CCATTGTTGCTCAATATGGCAAAGGCCTCCCTCAGG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGATTTCTCCAGCTCTCTaGATTAGAACTGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWISPAL*IRTGVS
Trigger: GGAAACACCAGTTCTAATGCAGAGAGCTGGAGAAAT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAAACACTCATCACACTaGCACTCACCTCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAKHSSH*HSPHLG
Trigger: TCCAAGATGAGGTGAGTGGCAGTGTGATGAGTGTTT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGATGCAATGAGGGGTaGAACCAAGATGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRCNEG*NQDVFP
Trigger: GGGGAAGACATCTTGGTTGCACCCCTCATTGCATCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGATGATATCTGCGCCATaGATTTTGTCCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLMISAP*ILSLCL
Trigger: AAGGCACAGGGACAAAATCCATGGCGCAGATATCAT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGNASQL*RKESIF
Trigger: AAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTT...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAATCACACTGGAAGCTaGATTTACCACACTGGAACT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCNHTGS*IYHTGT
Trigger: AGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATATTGGAGCCTTGATTTaGGACCCATTTGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNIGALI*DPFERP
Trigger: AGGCCTTTCAAATGGGTCCCAAATCAAGGCTCCAAT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTATTGGAGCCTTGATTTaGGACCCATTTGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPIGALI*DPFERP
Trigger: AGGCCTTTCAAATGGGTCCCAAATCAAGGCTCCAAT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWKFSHG*LGQVTQ
Trigger: TTGTGTCACCTGGCCTAACCATCCATGAGAGAATTT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISEILS*MVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSEILS*MVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: SLQLLSSGDFSYLYLEGWFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...CCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTTCTTCCTTAAACACTaGAGTAACAATCCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDFFLKH*SNNPFR
Trigger: ACGGAAGGGATTGTTACTCCAGTGTTTAAGGAAGAA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAATTTTCAGAAACACTTaGTTCAAGCACTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GPARVPDPLNCGTELWCEIFRNT*FKHLFS
Trigger: GGAAAACAAGTGCTTGAACCAAGTGTTTCTGAAAAT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CAGGTTTTCATCTTGCTTTCATCCATTCCTCACTGTGACTCTTCTTCATTAGCCTTCTGTGTGCTTAGCTaGCACTCACCACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVFILLSSIPHCDSSSLAFCVLS*HSPLSA
Trigger: AGCTGAAAGTGGTGAGTGCCAGCTAAGCACACAGAA...GGCTAATGAAGAAGAGTCACAGTGAGGAATGGATGAAAGCAAGATGAAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGTTCTTCTTCTGAACTaGAAGGATTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDVLLLN*KDFSSS
Trigger: AGAGCTGGAGAAATCCTTCCAGTTCAGAAGAAGAAC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCTTCACCACTCACCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: AHLEILAIKSILRGSVASPLTSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGG...TGAAGCAACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGGAAGCCCCCGGAGTTaGAAGCAATTAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAGSPRS*KQLVKM
Trigger: CATCTTGACTAATTGCTTCCAACTCCGGGGGCTTCC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR CCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTAACAAATGGTTAACATaGCTGACCCTTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QGLALGHTGELVSFHLCFNKWLT*LTLGEK
Trigger: TTTCTCTCCAAGGGTCAGCCATGTTAACCATTTGTT...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGTTTGTTGTGATGAGTaGCCTTCTGGCAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAVCCDE*PSGNLE
Trigger: CTCCAAGTTGCCAGAAGGTCACTCATCACAACAAAC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGWGLEP*FGTHLK
Trigger: TTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTATAACGAAGGGTTTCTaGGTCTGTGCTACTGGAACT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASITKGF*VCATGT
Trigger: AGTTCCAGTAGCACAGACTCAGAAACCCTTCGTTAT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTCATTGATGGTTGGTaGATTCTCCATAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIFIDGW*ILHRLW
Trigger: CCACAGTCTATGGAGAATTCACCAACCATCAATGAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTATCTTTGGGTTCATTaGTGGTTGGTGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWYLWVH*WLVNSP
Trigger: TGGAGAATTCACCAACCATCAATGAACCCAAAGATA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SQWNLGSFGNLGNQKHSEGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...CTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCACTTTCAGCTTTCTTaGGGAGAGCTGTATTTCCAA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAHFQLS*GELYFQ
Trigger: TTGGAAATACAGCTCTCCTCAAGAAAGCTGAAAGTG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATGTTGGATCCAATGGATaGGAATCTTCTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHVGSNG*ESSAAI
Trigger: GATGGCTGCAGAAGATTCTCATCCATTGGATCCAAC...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGCTAAGCGTCTGGTCTaGTGGAGACATTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLAKRLV*WRHLGS
Trigger: GCTGCCCAAATGTCTCCATCAGACCAGACGCTTAGC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATATTTCTTCCACTTCCTaGGGGAGGCCTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHISSTS*GRPLPY
Trigger: ATATGGCAAAGGCCTCCCTCAGGAAGTGGAAGAAAT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTCACATTGGTTGACTTaGGATTCCAAACCATTACTT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSHWLT*DSKPLL
Trigger: AAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACATTGTCAGTTTCACAACTaGGACAGCAGAATACATCTG +
Preference number: 4 (lower is better)
Translates to: TALVFWRLFLLVSGRMVHCQFHN*DSRIHL
Trigger: CAGATGTATTCTGCTGTCTCAGTTGTGAAACTGACA...ATGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTCATATTCTTCAGCTaGTGGTCATCCTTAATTTTT +
Preference number: 4 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLIFFS*WSSLIF
Trigger: AAAAATTAAGGATGACCAGCAGCTGAAGAATATGAG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGTCCCTGTGCCTTTTTaGCTTGGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASVPVPF*LGFIKP
Trigger: TGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTGCTCTGATGATATCTaGGCCATGGATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASCSDDI*AMDFVP
Trigger: AGGGACAAAATCCATGGCGCAGATATCATCAGAGCA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTCTTCTTTCTCATAGATaGTCTGATGATATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPLLSHR*SDDICA
Trigger: GGCGCAGATATCATCAGAGCATCTATGAGAAAGAAG...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTTCTTTCTCATAGATaGTCTGATGATATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILLSHR*SDDICA
Trigger: GGCGCAGATATCATCAGAGCATCTATGAGAAAGAAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGGCCTGGCAAAGTCTaGTTTGATTTCTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRPGKV*FDFSNF
Trigger: AAAGTTAGAGAAATCAAAGCAGACTTTGCCAGGCCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCTCTTCTGTGTCCCCTaGATCTTCCATTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGALFCVP*IFHSIF
Trigger: AAAAATGGAATGGAAGATGCAGGGGACACAGAAGAG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTCTTCTGTGTCCCCTaGATCTTCCATTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILFCVP*IFHSIF
Trigger: AAAAATGGAATGGAAGATGCAGGGGACACAGAAGAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATGGGCCACAAAAACATaGAACTCCTTCAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGWATKT*NSFSDS
Trigger: GGAGTCACTGAAGGAGTTGCATGTTTTTGTGGCCCA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTATCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGTCCTTCACCCAGATGTaGACTTCTCCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWSFTQM*TSPVVG
Trigger: TCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGA...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTCTGAAAGCAGTTTCTaGAAGCTGTCATTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLQLLSSGDFSYLYLEGWSESSF*KLSLKV
Trigger: CACTTTTAATGACAGCTTGCAGAAACTGCTTTCAGA...CCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCCATTTCAGCCCGGATaGAGCTCACATCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLPFQPG*SSHHCC
Trigger: GCAGCAGTGATGTGAGCTGCATCCGGGCTGAAATGG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389958.7
ENST00000529581.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGATATCACTAACACACTaGAGGCTGAAAAACTATTTC +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWISLTH*RLKNYF
Trigger: GAAATAGTTTTTCAGCCTGCAGTGTGTTAGTGATAT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGTGCCTTTTTGCCTTaGCTTCATAAAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNCAFLP*LHKTIG
Trigger: GCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGCCTTTTTGCCTTaGCTTCATAAAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGICAFLP*LHKTIG
Trigger: GCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATGTGCCTTTTTGCCTTaGCTTCATAAAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGCAFLP*LHKTIG
Trigger: GCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAATCACACTGGAAGCTaGATTTACCACACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGINHTGS*IYHTGT
Trigger: AGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTCCTTGTGTTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDFLVFS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAACACAAGGAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTCCTTGTGTTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFLVFS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAACACAAGGAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTCCTTGTGTTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWFLVFS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAACACAAGGAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTATTGGAGCCTTGATTTaGGACCCATTTGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASIGALI*DPFERP
Trigger: AGGCCTTTCAAATGGGTCCCAAATCAAGGCTCCAAT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIKFSHG*LGQVTQ
Trigger: TTGTGTCACCTGGCCTAACCATCCATGAGAGAATTT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGKFSHG*LGQVTQ
Trigger: TTGTGTCACCTGGCCTAACCATCCATGAGAGAATTT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGITALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGATALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: YKGPARVPDPLNCGTELWEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAGCACCTCTGCTTCATaGGTATTTTTACCTGATAAT +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSTSAS*VFLPDN
Trigger: ATTATCAGGTAAAAATACCCATGAAGCAGAGGTGCT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACCCTTTCTGGAAAGCTaGGAAGTTGGATCCAATGGA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGPFLES*EVGSNG
Trigger: TCCATTGGATCCAACTTCCCAGCTTTCCAGAAAGGG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTGCTTCAGGAAATTCTaGGTTCACTTCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHCFRKF*VHFSRT
Trigger: GGTCCTGGAGAAGTGAACCCAGAATTTCCTGAAGCA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAAAATCCTTCCTGTCTaGAACTATGGTGTCCATCGT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLKILPV*NYGVHR
Trigger: ACGATGGACACCATAGTTCCAGACAGGAAGGATTTT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTCCCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCTATCAGGAACTACATTaGAGGAATAAAAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: FPLAVVDQGIPSPRCALLYQELH*RNKNPS
Trigger: GGAAGGATTTTTATTCCTCCAATGTAGTTCCTGATA...GAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTCGAGGAACTCTGATTTaGGTTGAACAATTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRGTLI*VEQLFP
Trigger: GGGAAACAATTGTTCAACCCAAATCAGAGTTCCTCG...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCAGAAGTGGCTCGCCTaGGCTCCTCTGTACTACCTA +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLQKWLA*APLYYL
Trigger: TAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGINWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
3UTR CAA 72 bp CGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTTGGCAATCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RFSSFQWRSQWN*GSFGNLGNQKH
Trigger: ATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTATCTTTGGGTTCATTaGTGGTTGGTGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIYLWVH*WLVNSP
Trigger: TGGAGAATTCACCAACCATCAATGAACCCAAAGATA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATATCTTTGGGTTCATTaGTGGTTGGTGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQYLWVH*WLVNSP
Trigger: TGGAGAATTCACCAACCATCAATGAACCCAAAGATA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp ACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACATTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: TALVFWRLFLLVSGRMVHLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...ATGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCTGGTAACTGCTTTCTaGTGCTGTATCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASLVTAF*CCICFS
Trigger: AGAGAAACAGATACAGCATCAGAAAGCAGTTACCAG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGATKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGGGCAGCTTTTTCTTTaGAGCAGCAGCAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGGQLFL*SSSRNS
Trigger: TGAATTTCTGCTGCTGCTTCAAAGAAAAAGCTGCCC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGACTCAAAGGAAATGTaGTTTCATCTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASDSKEM*FHLVAP
Trigger: AGGTGCTACCAGATGAAATCACATTTCCTTTGAGTC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAACTCTGATTTGGGTTaGACAATTGTTTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPNSDLG*TIVSLT
Trigger: TGTGAGGGAAACAATTGTTCAACCCAAATCAGAGTT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGATCACTTTCATATTTTaGGGGGAAGGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWITFIF*GEGFSF
Trigger: GAAACTGAAACCTTCCCCTCAAAATATGAAAGTGAT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCACATTGGTTGACTTaGGATTCCAAACCATTACTT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSHWLT*DSKPLL
Trigger: AAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTAGTCAAGATGCAATaGGGGGTGCAACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHLVKMQ*GVQPRC
Trigger: ACATCTTGGTTGCACCCCTCATTGCATCTTGACTAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR GCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAGTTTATTCTCTCTCTaGACCTGTCGTCAATTCATA +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSLFSL*TCRQFI
Trigger: TATGAATTGACGACAGGTGCAGAGAGAGAATAAACT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGGCTCTCAGAAGGATaGTGTATTCCTTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRLSEG*CIPCQT
Trigger: TGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGTCCCTGTGCCTTTTTaGCTTGGCTTCATAAAACCA +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLVPVPF*LGFIKP
Trigger: TGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGCTCTGATGATATCTaGGCCATGGATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFACSDDI*AMDFVP
Trigger: AGGGACAAAATCCATGGCGCAGATATCATCAGAGCA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGGCCTGGCAAAGTCTaGTTTGATTTCTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRPGKV*FDFSNF
Trigger: AAAGTTAGAGAAATCAAAGCAGACTTTGCCAGGCCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAGGCCTGGCAAAGTCTaGTTTGATTTCTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGRPGKV*FDFSNF
Trigger: AAAGTTAGAGAAATCAAAGCAGACTTTGCCAGGCCT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTCAAGGGCAACTGGTaGTGTCTTCCGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFKGNW*CLPLQR
Trigger: CCTCTGAAGCGGAAGACAGCACCAGTTGCCCTTGAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: ARVPDPLNCGTELWCETHRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTCTGAAAGCAGTTTCTaGAAGCTGTCATTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDSESSF*KLSLKV
Trigger: CACTTTTAATGACAGCTTGCAGAAACTGCTTTCAGA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTCTGGACACACTAATTaGTTCAGAAGCCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASSGHTN*FRSLSK
Trigger: TTTGGAGAGGCTTCTGAAGCAATTAGTGTGTCCAGA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR GCA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCATTTCTCCAGCTCTCTaGATTAGAACTGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSISPAL*IRTGVS
Trigger: GGAAACACCAGTTCTAATGCAGAGAGCTGGAGAAAT...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGGAAGTCCTGGTCTGTaGGATAGTGTCGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLGSPGL*DSVEKR
Trigger: CCTCTTCTCGACACTATCCCACAGACCAGGACTTCC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTATGATATCTGCGCCATaGATTTTGTCCCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLMISAP*ILSLCL
Trigger: AAGGCACAGGGACAAAATCCATGGCGCAGATATCAT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGACATATCAATCACACTaGAAGCTGGATTTACCACAC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLTYQSH*KLDLPH
Trigger: GTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAACATATCAATCACACTaGAAGCTGGATTTACCACAC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGTYQSH*KLDLPH
Trigger: GTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTCCTTGTGTTTTCCTaGGACATATCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPFLVFS*DISITL
Trigger: CAGTGTGATTGATATGTCCCAGGAAAACACAAGGAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTATTGGAGCCTTGATTTaGGACCCATTTGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAIGALI*DPFERP
Trigger: AGGCCTTTCAAATGGGTCCCAAATCAAGGCTCCAAT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSEILS*MVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLPTSRP*ISPGLC
Trigger: ACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp AGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQWNLGSFGNLGNQKHSEILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...CTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGGCTCTGGGACATACTaGAGAGCTAGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAGSGTY*RASFIS
Trigger: TGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAACTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGALQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: QGLALGHTGELVSFHLCFEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGGAGCCAGTGGAATTTaGGCTCATTTGGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLGASGI*AHLEIL
Trigger: CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATTGTTTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCAGTGGAGGAGCCAGTaGAATTTGGGCTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: IVYSVCYPSPMFPNQVPPQWRSQ*NLGSFG
Trigger: TCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTG...AGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAACCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTACTGAATTGTACCTATaGCCAGTGGGTGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLTELYL*PVGGTK
Trigger: TTTAGTGCCACCCACTGGCCATAGGTACAATTCAGT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTCTTCCTTAAACACTaGAGTAACAATCCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFFLKH*SNNPFR
Trigger: ACGGAAGGGATTGTTACTCCAGTGTTTAAGGAAGAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGAATGAGCTAAGCGTCTaGTCTGATGGAGACATTTGG +
Preference number: 4 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWNELSV*SDGDIW
Trigger: CCAAATGTCTCCATCAGACCAGACGCTTAGCTCATT...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCTCAACTCCACTTCTaGAACCACAAAAATCTACCA +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISQLHF*NHKNLP
Trigger: TGGTAGATTTTTGTGGTTCCAGAAGTGGAGTTGAGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTCAACTCCACTTCTaGAACCACAAAAATCTACCA +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNSQLHF*NHKNLP
Trigger: TGGTAGATTTTTGTGGTTCCAGAAGTGGAGTTGAGA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGAGCCACATAAAGTTGTaGGGTTCTAGGGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWSHIKL*GSRDLN
Trigger: GTTGAGATCCCTAGAACCCCACAACTTTATGTGGCT...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAGCCACATAAAGTTGTaGGGTTCTAGGGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFASHIKL*GSRDLN
Trigger: GTTGAGATCCCTAGAACCCCACAACTTTATGTGGCT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAATTTTCAAAACAGGACTaGGTTCTTCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLEFSKQD*VLLLNW
Trigger: CCAGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTTTCAAAACAGGACTaGGTTCTTCTTCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFSKQD*VLLLNW
Trigger: CCAGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CCA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RVPDPLNCGTELWCETHDHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTCATTGATGGTTGGTaGATTCTCCATAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFIDGW*ILHRLW
Trigger: CCACAGTCTATGGAGAATTCACCAACCATCAATGAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTCATTGATGGTTGGTaGATTCTCCATAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLFIDGW*ILHRLW
Trigger: CCACAGTCTATGGAGAATTCACCAACCATCAATGAA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATTCATTGATGGTTGGTaGATTCTCCATAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGFIDGW*ILHRLW
Trigger: CCACAGTCTATGGAGAATTCACCAACCATCAATGAA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTATCTTTGGGTTCATTaGTGGTTGGTGAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASYLWVH*WLVNSP
Trigger: TGGAGAATTCACCAACCATCAATGAACCCAAAGATA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTACTTGCTCATCCTTTTaGGTTTGTCAGGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLTCSSF*VCQGEK
Trigger: TTTCTCACCCTGACAAACTCAAAAGGATGAGCAAGT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR TCA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR TCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAGGCCTTTGCCATATTaGGCAACAATGGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFARPLPY*ATMEAN
Trigger: ATTTGCTTCCATTGTTGCTCAATATGGCAAAGGCCT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp TTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGAACTCTGATTTGGGTTaGACAATTGTTTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LVVFSGGASGIWAHLEILNSDLG*TIVSLT
Trigger: TGTGAGGGAAACAATTGTTCAACCCAAATCAGAGTT...CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTATCACTTTCATATTTTaGGGGGAAGGTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPITFIF*GEGFSF
Trigger: GAAACTGAAACCTTCCCCTCAAAATATGAAAGTGAT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCTACT +
Preference number: 4 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSFVTGF*SGFSST
Trigger: AGTAGATGAGAAACCAGATCAGAAGCCAGTTACAAA...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGATTGGTTCATCTCCTTaGGATATATCACTAACACAC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRIGSSP*DISLTH
Trigger: GTGTGTTAGTGATATATCTCAAGGAGATGAACCAAT...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS-3UTR TCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAACTAGCAAGGAGTTaGACCAAATACAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLELARS*TKYKTK
Trigger: CTTTGTTTTGTATTTGGTTCAACTCCTTGCTAGTTC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTCATATTCTTCAGCTaGTGGTCATCCTTAATTTTT +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLIFFS*WSSLIF
Trigger: AAAAATTAAGGATGACCAGCAGCTGAAGAATATGAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATCTCTTCTGTGTCCCCTaGATCTTCCATTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHLFCVP*IFHSIF
Trigger: AAAAATGGAATGGAAGATGCAGGGGACACAGAAGAG...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTCATCTTGGAGAAATaGTGGAACAGACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLLILEK*WNRLAH
Trigger: ATGAGCAAGTCTGTTCCAGCATTTCTCCAAGATGAG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGALNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: YTIVWLKIGLVVFPTALVRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...GACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGAACCTACAAAGGTCCTaGAAGGGTACCAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLNLQRS*KGTRPS
Trigger: AGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTATAGACCTGTTCTaGATTGGGTTCATCCATTCT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGIIDLF*IGFIHS
Trigger: AGAATGGATGAACCCAATGCAGAACAGGTCTATAAT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp TCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTAGGAAATTCCTTGTGTTTCTaGCTATTAAAAGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVCYPSPMFPNQVPPPLGNSLCF*LLKGAE
Trigger: TTCTGCACCTTTTAATAGGCAGAAACACAAGGAATT...TCCTAGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGGATGAGAATCTTCTaGAGCCATCTGAATCAAATT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLWMRIF*SHLNQI
Trigger: AATTTGATTCAGATGGCTGCAGAAGATTCTCATCCA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTGTGCCTTTTTGCCTTaGCTTCATAAAACCATTGGC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHCAFLP*LHKTIG
Trigger: GCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAATCACACTGGAAGCTaGATTTACCACACTGGAACT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFANHTGS*IYHTGT
Trigger: AGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTAATCACACTGGAAGCTaGATTTACCACACTGGAACT +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLNHTGS*IYHTGT
Trigger: AGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATAGAACCAGAAGTCATTaGCTGATGTGTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNRTRSH*LMCFTF
Trigger: AAAAGTGAAACACATCAGCCAATGACTTCTGGTTCT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAGAACCAGAAGTCATTaGCTGATGTGTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGRTRSH*LMCFTF
Trigger: AAAAGTGAAACACATCAGCCAATGACTTCTGGTTCT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGAACCAGAAGTCATTaGCTGATGTGTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRTRSH*LMCFTF
Trigger: AAAAGTGAAACACATCAGCCAATGACTTCTGGTTCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTTTCAAAACAGGACTaGGTTCTTCTTCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFSKQD*VLLLNL
Trigger: AAGGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGTCAGGGTGAGAAAATaGATTATCAGGTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAVRVRK*IIRLCR
Trigger: CCTACACAACCTGATAATCCATTTTCTCACCCTGAC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTATCTTGGAGAAATGCTaGAACAGACTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAILEKC*NRLAHP
Trigger: AGGATGAGCAAGTCTGTTCCAGCATTTCTCCAAGAT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTCATCACTCTCATCTTaGAGAAATGCTGGAACAGAC +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLSSLSS*RNAGTD
Trigger: GTCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCTTTTTACCAGGGACTaGCTCTGGGACATACTGGAG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLLFTRD*LWDILE
Trigger: CTCCAGTATGTCCCAGAGCCAGTCCCTGGTAAAAAG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGTALVF*RLFLLV
Trigger: TACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFASYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGTACCTATGGCCAGTaGGTGGCACTAAAATACATT +
Preference number: 4 (lower is better)
Translates to: NLGSFGNLGNQKHSERQCCTYGQ*VALKYI
Trigger: AATGTATTTTAGTGCCACCCACTGGCCATAGGTACA...ACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAGCACCTCTGCTTCATaGGTATTTTTACCTGATAAT +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSTSAS*VFLPDN
Trigger: ATTATCAGGTAAAAATACCCATGAAGCAGAGGTGCT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGTCTCAACTCCACTTCTaGAACCACAAAAATCTACCA +
Preference number: 4 (lower is better)
Translates to: LVVFSGGASGIWAHLEILSQLHF*NHKNLP
Trigger: TGGTAGATTTTTGTGGTTCCAGAAGTGGAGTTGAGA...CAAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAAACTGGCTTCTGATCTaGTTTCTCATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGNWLLI*FLIIFS
Trigger: GCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTT...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCACTGTGGAAATTCTTaGTACGCATTCATTTGTAAC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRHCGNS*YAFICN
Trigger: GTTACAAATGAATGCGTACCAAGAATTTCCACAGTG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTTCCACCAGAGGGTTaGATTGCTGGTGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFPPEG*IAGVEV
Trigger: AACCTCAACACCAGCAATTCAACCCTCTGGTGGAAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTCTCTCTTATCAGCTaGAGTATTGTGACTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFSLIS*SIVTLF
Trigger: GAACAGAGTCACAATACTTCAGCTGATAAGAGAGAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CATAACTTTTACCTGTTCCAAAGCCAATACGAAGACCTCCCAAAAATTGGTTGGGAATTCGAGGAACTCTaGTTTGGGTTGAACAATTGT +
Preference number: 4 (lower is better)
Translates to: HNFYLFQSQYEDLPKIGWEFEEL*FGLNNC
Trigger: ACAATTGTTCAACCCAAATCAGAGTTCCTCGAATTC...CCAACCAATTTTTGGGAGGTCTTCGTATTGGCTTTGGAACAGGTAAAAGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCATTTCAGAGGTCTGTaGGGCTGCCCTGTAAAAATG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLHFRGL*GCPVKM
Trigger: CATTTTTACAGGGCAGCCTCACAGACCTCTGAAATG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFVTGF*SGFSSS
Trigger: AGATGATGAGAAACCAGATCAGAAGCCAGTTACAAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTCATATTCTTCAGCTaGTGGTCATCCTTAATTTTT +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGILIFFS*WSSLIF
Trigger: AAAAATTAAGGATGACCAGCAGCTGAAGAATATGAG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCTCATATTCTTCAGCTaGTGGTCATCCTTAATTTTT +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRLIFFS*WSSLIF
Trigger: AAAAATTAAGGATGACCAGCAGCTGAAGAATATGAG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTCATATTCTTCAGCTaGTGGTCATCCTTAATTTTT +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLIFFS*WSSLIF
Trigger: AAAAATTAAGGATGACCAGCAGCTGAAGAATATGAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGGCCTGGCAAAGTCTaGTTTGATTTCTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRPGKV*FDFSNF
Trigger: AAAGTTAGAGAAATCAAAGCAGACTTTGCCAGGCCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFASSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp TTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGAAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: FSLQLLSSGDFSYLYLEGRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...TCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp ATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGACAGGTTTTCATCTTaGTTTCATCCATTCCTCACT +
Preference number: 4 (lower is better)
Translates to: IWAHLEILAIKSILRGSVDRFSS*FHPFLT
Trigger: AGTGAGGAATGGATGAAAGCAAGATGAAAACCTGTC...AACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTTTCAAAACAGGACTaGGTTCTTCTTCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASFSKQD*VLLLNL
Trigger: AAGGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFALQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGACTTCAATCCAAGTATTaGGGGAGTTTACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGLQSKY*GSLPSS
Trigger: AGAAGATGGTAAACTCCCCCAATACTTGGATTGAAG...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp ATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTTTTAGTAGTTTTCAGTaGAGGAGCCAGTGGAATTTG +
Preference number: 4 (lower is better)
Translates to: IWAHLEILAIKSILRGSVFSSFQ*RSQWNL
Trigger: CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAA...AACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTATCAGGAACTACATTaGAGGAATAAAAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLYQELH*RNKNPS
Trigger: GGAAGGATTTTTATTCCTCCAATGTAGTTCCTGATA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR TCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCCTCTTTTGAAGTCTaGAATAAACCAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSSFEV*NKPVLP
Trigger: TGGAAGAACTGGTTTATTTCAGACTTCAAAAGAGGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGATAACGAAGGGTTTCTaGGTCTGTGCTACTGGAACT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLITKGF*VCATGT
Trigger: AGTTCCAGTAGCACAGACTCAGAAACCCTTCGTTAT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTCCCTGCTCCACTTTaGGTATCTTTCTGCGACTTT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFPAPL*VSFCDF
Trigger: AAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTGCAAAACATGTTTGTaGCTACTCTTATGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLCKTCL*LLLCCF
Trigger: AAAGCAGCATAAGAGTAGTCACAAACATGTTTTGCA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCGTTTAACCTTTGGATaGACTACTGTTTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFARLTFG*TTVLST
Trigger: TGTTGACAAAACAGTAGTTCATCCAAAGGTTAAACG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGAAACACTCATCACACTaGCACTCACAGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLKHSSH*HSQKTR
Trigger: CCTTGTCTTCTGTGAGTGGCAGTGTGATGAGTGTTT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR GCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTAAATGTATCCCGATaGCAAATGGACAGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHLNVSR*QMDRFN
Trigger: ATTGAACCTGTCCATTTGGCATCGGGATACATTTAA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTGAATATTTCCTTTAACTTCCAGATTGCCAAAGTCTCCACTATAAACACTCATTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: LNISFNFQIAKVSTINTHSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...ATGAGTGTTTATAGTGGAGACTTTGGCAATCTGGAAGTTAAAGGAAATATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTCTGAGAGGCAGTGTTaGTTCAATCCAAGTATTGGG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLSERQC*FNPSIG
Trigger: CCCAATACTTGGATTGAAGCAACACTGCCTCTCAGA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASRLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR GCA 90 bp ATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGTAGCACCTGGAGTATaGCCTTTGAATTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: IWAHLEILAIKSILRGSVVAPGV*PLNLIS
Trigger: AGAAATTAAATTCAAAGGGCATACTCCAGGTGCTAC...AACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR GCA 90 bp AATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGGATGAGAATCTTCTaGAGCCATCTGAATCAAATT +
Preference number: 4 (lower is better)
Translates to: NLGSFGNLGNQKHSERQCWMRIF*SHLNQI
Trigger: AATTTGATTCAGATGGCTGCAGAAGATTCTCATCCA...ACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGAACCAGAAGTCATTaGCTGATGTGTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRTRSH*LMCFTF
Trigger: AAAAGTGAAACACATCAGCCAATGACTTCTGGTTCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAGAACCAGAAGTCATTaGCTGATGTGTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFARTRSH*LMCFTF
Trigger: AAAAGTGAAACACATCAGCCAATGACTTCTGGTTCT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTTCAAAACAGGACTaGGTTCTTCTTCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAFSKQD*VLLLNL
Trigger: AAGGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATTTTCAAAACAGGACTaGGTTCTTCTTCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGFSKQD*VLLLNL
Trigger: AAGGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGCTAAGTCCTTACACTaGGCCACAAAAACATGCAAC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLAKSLH*ATKTCN
Trigger: GTTGCATGTTTTTGTGGCCCAGTGTAAGGACTTAGC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTCCCAAAAATTGGTTaGTTAATTTGTAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLLPKIG*LICNGP
Trigger: GGGACCATTACAAATTAACCAACCAATTTTTGGGAG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGATGCAACTCCTTCAGTaGCTCCACATATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLMQLLQ*LHIFNC
Trigger: GCAATTGAATATGTGGAGTCACTGAAGGAGTTGCAT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAGATTGACTTTTACATaGTGTGTAGTATTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFARLTFT*CVVFLR
Trigger: CCTAAGGAATACTACACAGCATGTAAAAGTCAATCT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAAATTCCTTGTGTTTCTaGCTATTAAAAGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGNSLCF*LLKGAE
Trigger: TTCTGCACCTTTTAATAGGCAGAAACACAAGGAATT...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTATCCCGATGCCAAATaGACAGGTTCAATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLYPDAK*TGSISV
Trigger: CACAGAAATTGAACCTGTCCATTTGGCATCGGGATA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: CGTELWCETHDGKQEHFAFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: VAQNCGVKHMMANKNILLFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTCATACACCATAGTGTaGTTGAAGATAGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLSYTIV*LKIGLV
Trigger: CACCAACCCTATCTTCAACCACACTATGGTGTATGA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CCA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATATTTTCAGAAACACTTaGTTCAAGCACTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LNCGTELWCETHDGKQEHIFRNT*FKHLFS
Trigger: GGAAAACAAGTGCTTGAACCAAGTGTTTCTGAAAAT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp CTGAATATTTCCTTTAACTTCCAGATTGCCAAAGTCTCCACTATAAACACTCATCAATACAGGTCTGGGTaGAAGAATGACTTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LNISFNFQIAKVSTINTHQYRSG*KNDFLY
Trigger: GTAGAGAAAGTCATTCTTCCACCCAGACCTGTATTG...ATGAGTGTTTATAGTGGAGACTTTGGCAATCTGGAAGTTAAAGGAAATATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CCA 90 bp CTGAATATTTCCTTTAACTTCCAGATTGCCAAAGTCTCCACTATAAACACTCATGTTCTTCTTCTGAACTaGAAGGATTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LNISFNFQIAKVSTINTHVLLLN*KDFSSS
Trigger: AGAGCTGGAGAAATCCTTCCAGTTCAGAAGAAGAAC...ATGAGTGTTTATAGTGGAGACTTTGGCAATCTGGAAGTTAAAGGAAATATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTGAGTTTGTCAGGGTaGGAAAATGGATTATCAGGT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLLSLSG*ENGLSG
Trigger: ACCTGATAATCCATTTTCTCACCCTGACAAACTCAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGACAAAAGAATTTAGATaGCTTCCCCTTAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLTKEFR*LPLSSG
Trigger: ACCACTGCTAAGGGGAAGTCATCTAAATTCTTTTGT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTCTTCTTGCCCATTTTaGCTTTGTCTGGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLSSCPF*LCLVAN
Trigger: ATTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp CTGAATATTTCCTTTAACTTCCAGATTGCCAAAGTCTCCACTATAAACACTCATCCATGTTTAATGCTCTaGGGCAGCTTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LNISFNFQIAKVSTINTHPCLML*GSFFFE
Trigger: TTCAAAGAAAAAGCTGCCCCAGAGCATTAAACATGG...ATGAGTGTTTATAGTGGAGACTTTGGCAATCTGGAAGTTAAAGGAAATATTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR TCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTCCTCTTTTGAAGTCTaGAATAAACCAGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLSSFEV*NKPVLP
Trigger: TGGAAGAACTGGTTTATTTCAGACTTCAAAAGAGGA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGATTATAGACCTGTTCTaGATTGGGTTCATCCATTCT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLIIDLF*IGFIHS
Trigger: AGAATGGATGAACCCAATGCAGAACAGGTCTATAAT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR GCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGTAGCACCTGGAGTATaGCCTTTGAATTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLVAPGV*PLNLIS
Trigger: AGAAATTAAATTCAAAGGGCATACTCCAGGTGCTAC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CCA 90 bp ATTGTTTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: IVYSVCYPSPMFPNQVPPFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...AGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAAACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTTCCTACTTGTATCTaGAAGGATGGTACATTTAAC +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFPTCI*KDGTFN
Trigger: GTTAAATGTACCATCCTTCCAGATACAAGTAGGAAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CCA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGAATTTGGGCTCATTTaGAAATCTTGGCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLEFGLI*KSWQSK
Trigger: TTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS GCA 90 bp GCGCAGCCCCGGGCGCGGCGCGTTACCTTCCCCCGGGCAAGGCGTTaGGAGCCTTCACTCTCCCGACGGACGCTGGCGGCACGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: AQPRARRVTFPRARR*EPSLSRRTLAARPG
Trigger: CCCGGGCCGTGCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGGAAGGTAACGCGCCGCGCCCGGGGCTGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CCA 90 bp GTCGCTGCCGGGCAGGGAGCGCGCCTCGCCGTCTCTCTTGTCTTCTaGCCCCCAGCCCTCGGCCTGGCGGTGCAAACCGCGCAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VAAGQGARLAVSLVF*PPALGLAVQTAQPR
Trigger: CCGGGGCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGCGCGCTCCCTGCCCGGCAGCGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CCA 90 bp CGCGCCTCGCCGTCTCTCTTGTCTTCTGGCCCCCAGCCCTCGGCCTaGCGGTGCAAACCGCGCAGCCCCGGGCGCGGCGCGTTACCTTCC +
Preference number: 5 (lower is better)
Translates to: RASPSLLSSGPQPSA*RCKPRSPGRGALPS
Trigger: GGAAGGTAACGCGCCGCGCCCGGGGCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CCA 90 bp TCCCCCGGGCAAGGCGTTGCGAGCCTTCACTCTCCCGACGGACGCTaGCGGCACGGCCCGGGTGTCGCCCGGCACTGTCAACGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SPGQGVASLHSPDGR*RHGPGVARHCQRRA
Trigger: CGCTCTGCGTTGACAGTGCCGGGCGACACCCGGGCCGTGCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389960.8
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCCCCCGGGCAAGGCGTaGCGAGCCTTCACTCTCCCG +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELPPGKA*RAFTLP
Trigger: CGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGCCTCGCCGTCTCTCTaGTCTTCTGGCCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLASPSL*SSGPQP
Trigger: GGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCCCCGGGCAAGGCGTaGCGAGCCTTCACTCTCCCG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDPPGKA*RAFTLP
Trigger: CGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000316356.8
ENST00000389960.8
CDS CCA 90 bp GAGAGGAGGGGGCTTACCTTGCTGACGGTCTCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGGCTCAACACAATGAGACAGTTCATC +
Preference number: 5 (lower is better)
Translates to: ERRGLTLLTVSRTAT*HLRWLRLNTMRQFI
Trigger: GATGAACTGTCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAGCAAGGTAAGCCCCCTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCCCCCGGGCAAGGCGTaGCGAGCCTTCACTCTCCCG +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASPPGKA*RAFTLP
Trigger: CGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGAACTGGAGTTGCGCTaGAGGATCCCTCTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWELELR*RIPLGA
Trigger: GGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS CCA 90 bp ATTTACCACACTGGAACTCGGGCTTGCTGGTGCTGCATCTTCTTCTaGCTCTTCTACAACGCCAGCCAGCTCTGGAGGAAGGAAAGCATC +
Preference number: 5 (lower is better)
Translates to: IYHTGTRACWCCIFF*LFYNASQLWRKESI
Trigger: GATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTTGTAGAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTGTGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 90 bp CTTACCTTGCTGACGGTCTCTAGAACTGCCACCTGGCACCTGAGATaGCTCAGGCTCAACACAATGAGACAGTTCATCAGCAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LTLLTVSRTATWHLR*LRLNTMRQFISRAS
Trigger: AGAAGCCCTGCTGATGAACTGTCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAGCAAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634661.1
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGCCTCGCCGTCTCTCTaGTCTTCTGGCCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASASPSL*SSGPQP
Trigger: GGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000527523.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAACTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCELLELE*RLRIPL
Trigger: GAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAG...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS GCA 90 bp TGTCTGACTCTCTCTTCTTCGGCCCTCTTCAGAGCAGCATCCCGCTaGAAAACCTTCATGATGGCCTCTTGTTCCTCTTCAGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CLTLSSSALFRAASR*KTFMMASCSSSVRK
Trigger: CTTCCTGACTGAAGAGGAACAAGAGGCCATCATGAAGGTTTTGCAGCGGGATGCTGCTCTGAAGAGGGCCGAAGAAGAGAGAGTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000528231.5
ENST00000634661.1
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATCACTGGAACTCGGGCTaGCTGGTGCTGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNHWNSG*LVLHLL
Trigger: AAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTG...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCACTGGAACTCGGGCTaGCTGGTGCTGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWHWNSG*LVLHLL
Trigger: AAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCGAACTGGAGTTGCGCTaGAGGATCCCTCTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCELELR*RIPLGA
Trigger: GGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTC...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELLLELE*RLRIPL
Trigger: GAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATATAACAGGCGCCAACTaGGCTTGCAAGGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNITGAN*ACKGEG
Trigger: ACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTAT...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTATAACAGGCGCCAACTaGGCTTGCAAGGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSITGAN*ACKGEG
Trigger: ACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTAT...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS GCA 90 bp TGGGATAGTGTCGAGAAGAGGCTCTCAGAAGGATGCTGTATTCCTTaGCAAACAGGTCGCTTGTTCCTATGGTGGCTTCCAGCACACTCA +
Preference number: 5 (lower is better)
Translates to: WDSVEKRLSEGCCIP*QTGRLFLWWLPAHS
Trigger: TGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCTCTTCTCGACACTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS GCA 90 bp TCCAGCTTAGAGTTGGTTCCAGTGATAACAGGCGCCAACTTGGCTTaGAAGGGAGAGGGTGAAGTTCCAGTTGCTTCCTTCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SSLELVPVITGANLA*KGEGEVPVASFRSL
Trigger: CAAACTCCTGAAGGAAGCAACTGGAACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTATCACTGGAACCAACTCTAAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 90 bp TTCTCTCTCTGCACTTGGTTCTTGGGAACCTCACCAGCTTCTTGCTaGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: FSLCTWFLGTSPASC*NWTSGFFQGEPLLA
Trigger: TGCCAACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCCAAACAGGTCGCTaGTTCCTATGGTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNCQTGR*FLWWLP
Trigger: TGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGCCAAACAGGTCGCTaGTTCCTATGGTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELCQTGR*FLWWLP
Trigger: TGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCA...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGAACTGGAGTTGCGCTaGAGGATCCCTCTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNELELR*RIPLGA
Trigger: GGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCCACCAGAGGGTTGAATaGCTGGTGTTGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPHQRVE*LVLRFL
Trigger: CAGAAACCTCAACACCAGCAATTCAACCCTCTGGTG...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTCCTGAAGAGTCCCTaGTCCCCCTGCAACCCCACT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFLKSP*SPCNPT
Trigger: AGTGGGGTTGCAGGGGGACAAGGGACTCTTCAGGAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAGCCACTCACCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCEATHLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGGC...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
CDS TCA 90 bp ACCAAGATGTCTTCCCCAAAATACTTTCTCTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGAGCTCCCATTTCAGCCCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: TKMSSPKYFLFRLAP*ASAIAGAPISARMQ
Trigger: CTGCATCCGGGCTGAAATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAAGAGAAAGTATTTTGGGGAAGACATCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389958.7
ENST00000528566.1
ENST00000532995.5
ENST00000533057.6
ENST00000533577.1
ENST00000534554.1
CDS CCA 90 bp TCAGAAGGATGCTGTATTCCTTGCCAAACAGGTCGCTTGTTCCTATaGTGGCTTCCAGCACACTCACTCTCTGGTCCAGTCTTAGACACA +
Preference number: 5 (lower is better)
Translates to: SEGCCIPCQTGRLFL*WLPAHSLSGPVLDT
Trigger: TGTGTCTAAGACTGGACCAGAGAGTGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACAGCATCCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS CCA 90 bp CTTACCTTGCTGACGGTCTCTAGAACTGCCACCTGGCACCTGAGATaGCTCAGGCTCAACACAATGAGACAGTTCATCTGCAACATAGAA +
Preference number: 5 (lower is better)
Translates to: LTLLTVSRTATWHLR*LRLNTMRQFICNIE
Trigger: TTCTATGTTGCAGATGAACTGTCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAGCAAGGTAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525423.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAGGATGCTGTATTCCTaGCCAAACAGGTCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPRMLYS*PNRSLV
Trigger: AACAAGCGACCTGTTTGGCAAGGAATACAGCATCCT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAACTTCATGATGGCCTCTaGTTCCTCTTCAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCELHDGL*FLFSQE
Trigger: TTCCTGACTGAAGAGGAACAAGAGGCCATCATGAAG...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCACTGGAACTCGGGCTaGCTGGTGCTGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCHWNSG*LVLHLL
Trigger: AAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTATCATCTTCCTGGCTTaGGGGATTGGAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLIIFLA*GIGALI
Trigger: AATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGAT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGAACTGGAGTTGCGCTaGAGGATCCCTCTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASELELR*RIPLGA
Trigger: GGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCEWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCEKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTTCCTGAAGAGTCCCTaGTCCCCCTGCAACCCCACT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIFLKSP*SPCNPT
Trigger: AGTGGGGTTGCAGGGGGACAAGGGACTCTTCAGGAA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGCCACTCACCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNATHLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGGC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
CDS TCA 90 bp TCATCATTCACATATGCCTCTGGGAGGCTTGCTTGGGAAGTCAACTaGAGAGATGTAACTGGGGACCAGCTGCTAAGTGGAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSFTYASGRLAWEVN*RDVTGDQLLSGILA
Trigger: TGCCAAGATTCCACTTAGCAGCTGGTCCCCAGTTACATCTCTTCAGTTGACTTCCCAAGCAAGCCTCCCAGAGGCATATGTGAATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS GCA 90 bp GTTCATCAGGAGAGGAATGGGTTGCCTATTTCTGGACACACTAATTaGTTCAGAAGCCTCTCCAAAGCCAGGTTCCTGAAGAGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VHQERNGLPISGHTN*FRSLSKARFLKSPL
Trigger: CAAGGGACTCTTCAGGAACCTGGCTTTGGAGAGGCTTCTGAAGCAATTAGTGTGTCCAGAAATAGGCAACCCATTCCTCTCCTGATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CCA 90 bp TGGTGCTGCATCTTCTTCTGGCTCTTCTACAACGCCAGCCAGCTCTaGAGGAAGGAAAGCATCTTTGTTGACATTATTCACCCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: WCCIFFWLFYNASQL*RKESIFVDIIHPAF
Trigger: GAAAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTTGTAGAAGAGCCAGAAGAAGATGCAGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 90 bp AACGGAGCCTCGGCCTTTTCTACTGTTTCTTTTAATTCCTCAGGATaGCATTCAGAAGTGGCTCGCCTGGGCTCCTCTGTACTACCTATT +
Preference number: 5 (lower is better)
Translates to: NGASAFSTVSFNSSG*HSEVARLGSSVLPI
Trigger: AATAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAAAGAAACAGTAGAAAAGGCCGAGGCTCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTGCCAAACAGGTCGCTaGTTCCTATGGTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWCQTGR*FLWWLP
Trigger: TGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTAGGATGCTGTATTCCTaGCCAAACAGGTCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGRMLYS*PNRSLV
Trigger: AACAAGCGACCTGTTTGGCAAGGAATACAGCATCCT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCACTGGAACTCGGGCTaGCTGGTGCTGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNHWNSG*LVLHLL
Trigger: AAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCAGGGAGTCTGTCCTTaGTCTAGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWQGVCP*SRKRLV
Trigger: AACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGLLELE*RLRIPL
Trigger: GAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCCTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGALLELE*RLRIPL
Trigger: GAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAG...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNLLELE*RLRIPL
Trigger: GAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCEEFGEE*SSKECS
Trigger: GGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTC...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGCGAAGGCTTTCTGTATaGAGAAGGCTTAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELRRLSV*RRLRVT
Trigger: AGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTCG...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCEIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAGGGTGAAGTTCCAGTaGCTTCCTTCAGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNRVKFQ*LPSGVC
Trigger: ACAAACTCCTGAAGGAAGCAACTGGAACTTCACCCT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAGGGAAAAAGCATATCTaGGGGAGGGCTGGCCACATC +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQGKKHI*GRAGHI
Trigger: GATGTGGCCAGCCCTCCCCAAGATATGCTTTTTCCC...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGGAAAAAGCATATCTaGGGGAGGGCTGGCCACATC +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIGKKHI*GRAGHI
Trigger: GATGTGGCCAGCCCTCCCCAAGATATGCTTTTTCCC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTGAGGCCTTTGCCATATaGAGCAACAATGGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLEAFAI*SNNGSK
Trigger: TTTGCTTCCATTGTTGCTCAATATGGCAAAGGCCTC...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTTTCCTGAAGAGTCCCTaGTCCCCCTGCAACCCCACT +
Preference number: 5 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPFLKSP*SPCNPT
Trigger: AGTGGGGTTGCAGGGGGACAAGGGACTCTTCAGGAA...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTGGAAGCCCCCGGAGTaGGAAGCAATTAGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDWKPPE*EAISQD
Trigger: ATCTTGACTAATTGCTTCCAACTCCGGGGGCTTCCA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS TCA 90 bp GCTGATTATCTACTTTTGCTTGATTTTCTCTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGAGCTCCCATTTCAGCCCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: ADYLLLLDFLFRLAP*ASAIAGAPISARMQ
Trigger: CTGCATCCGGGCTGAAATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAAGAGAAAATCAAGCAAAAGTAGATAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529581.5
ENST00000533892.5
CDS GCA 90 bp CCAGGACTCTGTGGAAGCTCATCCTTCACTGCAGAGAATCTCACATaGTTTAATGGCTCCAGGGAGTTTGGGGAAGAGTTGTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: PGLCGSSSFTAENLT*FNGSREFGEELSSK
Trigger: TTTAGAAGACAACTCTTCCCCAAACTCCCTGGAGCCATTAAAGCATGTGAGATTCTCTGCAGTGAAGGATGAGCTTCCACAGAGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 90 bp TATTTGTGTGTGTGCATCATCATTCACATATGCCTCTGGGAGGCTTaGTTGGGAAGTCAACTGAAGAGATGTAACTGGGGACCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: YLCVCIIIHICLWEA*LGSQLKRCNWGPAA
Trigger: AGCAGCTGGTCCCCAGTTACATCTCTTCAGTTGACTTCCCAAGCAAGCCTCCCAGAGGCATATGTGAATGATGATGCACACACACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS CCA 90 bp ACACATTTGGTTTCCTTGTGTTTTCCTGGGACATATCAATCACACTaGAAGCTGGATTTACCACACTGGAACTCGGGCTTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: THLVSLCFPGTYQSH*KLDLPHWNSGLLVL
Trigger: CAGCACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS-3UTR CAA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGCTTCATGATGGCCTCTaGTTCCTCTTCAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVLHDGL*FLFSQE
Trigger: TTCCTGACTGAAGAGGAACAAGAGGCCATCATGAAG...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCACTGGAACTCGGGCTaGCTGGTGCTGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASHWNSG*LVLHLL
Trigger: AAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWEFGEE*SSKECS
Trigger: GGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATCGAAGGCTTTCTGTATaGAGAAGGCTTAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHRRLSV*RRLRVT
Trigger: AGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTCG...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCENAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: SLQLLSSGDFSYLYLEGWGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...CCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCENCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCCCAGACAGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCAGTTGAATTGCTGGTGTaGAGGTTTCTGAAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: SQTVSSTQASIRSSGLNPVELLV*RFLKAV
Trigger: AACTGCTTTCAGAAACCTCAACACCAGCAATTCAAC...TGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACTGTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGATCTTCTCAGGTCCTTaGACTTCTTCCTCAGTATCA +
Preference number: 5 (lower is better)
Translates to: PLAVVDQGIPSPRCALLQIFSGP*TSSSVS
Trigger: TGATACTGAGGAAGAAGTCAAAGGACCTGAGAAGAT...CTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTCTTCCAGCTTAGAGTaGGTTCCAGTGATAACAGGC +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSSSLE*VPVITG
Trigger: GCCTGTTATCACTGGAACCAACTCTAAGCTGGAAGA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTTCTTCCAGCTTAGAGTaGGTTCCAGTGATAACAGGC +
Preference number: 5 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVSSSLE*VPVITG
Trigger: GCCTGTTATCACTGGAACCAACTCTAAGCTGGAAGA...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp AGTAAGCTCTACACAGGCTTCCATCAGATCTTCAGGCCTGAACCCATCATACACATGAGCCACATAAAGTaGTGGGGTTCTAGGGATCTC +
Preference number: 5 (lower is better)
Translates to: SKLYTGFHQIFRPEPIIHMSHIK*WGSRDL
Trigger: GAGATCCCTAGAACCCCACAACTTTATGTGGCTCAT...GTGTATGATGGGTTCAGGCCTGAAGATCTGATGGAAGCCTGTGTAGAGCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCAGGAGAGGAATGGGTaGCCTATTTCTGGACACACT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCQERNG*PISGHT
Trigger: AGTGTGTCCAGAAATAGGCAACCCATTCCTCTCCTG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS CCA 90 bp TTCTGTCACTCACTCTTTTGTATTTCTCTCTCTGCACTTGGTTCTTaGGAACCTCACCAGCTTCTTGCTGGAATTGGACCTCAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FCHSLFCISLSALGS*EPHQLLAGIGPQAS
Trigger: AGAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATACAAAAGAGTGAGTGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELGRKAS*LTLFTQ
Trigger: CTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCC...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCACACATTTGGTTTCCTaGTGTTTTCCTGGGACATAT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPTHLVS*CFPGTY
Trigger: ATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAAGTATCTGCGACAGTaGACTTTTCTTTTGACTCTG +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPKYLRQ*TFLLTL
Trigger: CAGAGTCAAAAGAAAAGTCAACTGTCGCAGATACTT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATATCATCTTCCTGGCTTaGGGGATTGGAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDIIFLA*GIGALI
Trigger: AATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGAT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGATCATCTTCCTGGCTTaGGGGATTGGAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWIIFLA*GIGALI
Trigger: AATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGAT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCCAGGTGACACAATTTaGCTTTTGGGTTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGPGDTI*LLGSKL
Trigger: CAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCGAAGGCTTTCTGTATaGAGAAGGCTTAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRRLSV*RRLRVT
Trigger: AGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTCG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACCATATGGGCTTGAGGTaGATTGATGAAAAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNHMGLR*IDEKAK
Trigger: CTTCGCTTTTTCATCAATCAACCTCAAGCCCATATG...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGCATATGGGCTTGAGGTaGATTGATGAAAAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWHMGLR*IDEKAK
Trigger: CTTCGCTTTTTCATCAATCAACCTCAAGCCCATATG...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCATATGGGCTTGAGGTaGATTGATGAAAAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGHMGLR*IDEKAK
Trigger: CTTCGCTTTTTCATCAATCAACCTCAAGCCCATATG...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAATTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: GPARVPDPLNCGTELWCELSLGS*MVGEFS
Trigger: GGAGAATTCACCAACCATCAATGAACCCAAAGATAA...TTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: TYKGPARVPDPLNCGTELKWIIR*CRHCGN
Trigger: GTTTCCACAGTGCCTACACAACCTGATAATCCATTT...CAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000525702.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWKWIIR*CRHCGN
Trigger: GTTTCCACAGTGCCTACACAACCTGATAATCCATTT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000525702.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACCAGGGACTGGCTCTAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: TQMCTSPVVGSFLPGTGSNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...AGAGCCAGTCCCTGGTAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp CAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: QPTKVLQGYQTLLTVAQNFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...ATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CAGGGACTGGCTCTGGGACATACTGGAGAGCTAGTTTCATTTCACCTCTGTTTTAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: QGLALGHTGELVSFHLCFRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...AAAACAGAGGTGAAATGAAACTAGCTCTCCAGTATGTCCCAGAGCCAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTACACCAGAGGGTTGAATaGCTGGTGTTGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLHQRVE*LVLRFL
Trigger: CAGAAACCTCAACACCAGCAATTCAACCCTCTGGTG...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp ACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTATCTTCTCAGGTCCTTaGACTTCTTCCTCAGTATCA +
Preference number: 5 (lower is better)
Translates to: TKVLQGYQTLLTVAQNCGIFSGP*TSSSVS
Trigger: TGATACTGAGGAAGAAGTCAAAGGACCTGAGAAGAT...ACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCAGGAGAGGAATGGGTaGCCTATTTCTGGACACACT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLQERNG*PISGHT
Trigger: AGTGTGTCCAGAAATAGGCAACCCATTCCTCTCCTG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCCACTCACCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLATHLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGGC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGGAAGCCCCCGGAGTaGGAAGCAATTAGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNWKPPE*EAISQD
Trigger: ATCTTGACTAATTGCTTCCAACTCCGGGGGCTTCCA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR CAA 90 bp CTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTTGTCTTAGAGTAGGTTaGTTTAGTGAGCATGAGGAT +
Preference number: 5 (lower is better)
Translates to: LRLFPTTYKGPARVPDPLCLRVG*FSEHED
Trigger: ATCCTCATGCTCACTAAACAAACCTACTCTAAGACA...AAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS TCA 90 bp CAGTTGATTTGTAGATCATCTTCCTGGCTTTGGGGATTGGAGCCTTaGTTTGGGACCCATTTGAAAGGCCTGGCAAAGTCTGCTTTGATT +
Preference number: 5 (lower is better)
Translates to: QLICRSSSWLWGLEP*FGTHLKGLAKSALI
Trigger: AATCAAAGCAGACTTTGCCAGGCCTTTCAAATGGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGATCTACAAATCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 90 bp TTTAATGGCTCCAGGGAGTTTGGGGAAGAGTTGTCTTCTAAAGAATaGTCCTTCTCAGAAATTCTCTCATGGATGGTTAGGCCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: FNGSREFGEELSSKE*SFSEILSWMVRPGD
Trigger: GTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTCCCTGGAGCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 90 bp TTCTCCAATGGAGCATGTCGTTCACTCCCGACATTTGAGGGAGGTTaGAGTGCTGGTAAAGTAATGTTTCTTCTAGAAGGCAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: FSNGACRSLPTFEGG*SAGKVMFLLEGKLS
Trigger: AGACAGTTTGCCTTCTAGAAGAAACATTACTTTACCAGCACTGCAACCTCCCTCAAATGTCGGGAGTGAACGACATGCTCCATTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS GCA 90 bp ACTCTCTTCTTTCCTAGGCAGTTCTTAAGAATTTGTCAAGTCATGTaGCAAAGTTCAGCACCTTCACTGCTGGCAGGAGGACCTCATAAG +
Preference number: 5 (lower is better)
Translates to: TLFFPRQFLRICQVM*QSSAPSLLAGGPHK
Trigger: CTTATGAGGTCCTCCTGCCAGCAGTGAAGGTGCTGAACTTTGGCACATGACTTGACAAATTCTTAAGAACTGCCTAGGAAAGAAGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532221.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGGATGCTGTATTCCTaGCCAAACAGGTCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRMLYS*PNRSLV
Trigger: AACAAGCGACCTGTTTGGCAAGGAATACAGCATCCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTGTCCCTGTGCCTTTTaGCCTTGGCTTCATAAAACC +
Preference number: 5 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRCPCAF*PWLHKT
Trigger: GGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGACA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGTCCCTGTGCCTTTTaGCCTTGGCTTCATAAAACC +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLCPCAF*PWLHKT
Trigger: GGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGACA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCCCTGTGCCTTTTaGCCTTGGCTTCATAAAACC +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGICPCAF*PWLHKT
Trigger: GGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGACA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATGTCCCTGTGCCTTTTaGCCTTGGCTTCATAAAACC +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQCPCAF*PWLHKT
Trigger: GGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGACA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDGRKAS*LTLFTQ
Trigger: CTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCATCTTCCTGGCTTaGGGGATTGGAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGIIFLA*GIGALI
Trigger: AATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGAT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCAGGGAGTCTGTCCTTaGTCTAGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLQGVCP*SRKRLV
Trigger: AACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCAGGGAGTCTGTCCTTaGTCTAGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRQGVCP*SRKRLV
Trigger: AACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTCAGGGAGTCTGTCCTTaGTCTAGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPQGVCP*SRKRLV
Trigger: AACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTG...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCAGGTGACACAATTTaGCTTTTGGGTTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDPGDTI*LLGSKL
Trigger: CAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGG...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCEFGEE*SSKECS
Trigger: GGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTC...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCGAAGGCTTTCTGTATaGAGAAGGCTTAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRRLSV*RRLRVT
Trigger: AGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTCG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPSDDLS*GSLMVG
Trigger: ACCAACCATCAATGAACCCAAAGATAAATCATCAGA...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGAGGAGCTGCTAAGATaGGTTAAAGAGCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLEELLR*VKELGL
Trigger: GAGCCCGAGCTCTTTAACCAATCTTAGCAGCTCCTC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTATCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AGGCCTGAACCCATCATACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RPEPIIHHSVVEDRVGGFYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...AAAACCACCAACCCTATCTTCAACCACACTATGGTGTATGATGGGTTCAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTAGGAAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: SVCYPSPMFPNQVPPPLGRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...TCCTAGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGTTGAATTGCTGGTGTaGAGGTTTCTGAAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHVELLV*RFLKAV
Trigger: AACTGCTTTCAGAAACCTCAACACCAGCAATTCAAC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGACTTGGTTCAAGCACTaGTTTTCCATGAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWTWFKH*FSMNFS
Trigger: GGAAAAGTTCATGGAAAACAAGTGCTTGAACCAAGT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGGGTGAAGTTCCAGTaGCTTCCTTCAGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRVKFQ*LPSGVC
Trigger: ACAAACTCCTGAAGGAAGCAACTGGAACTTCACCCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCTCCGAAATTTCCGTTaGAGAAGGGTGTACCCTAGC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASLRNFR*RRVYPS
Trigger: GCTAGGGTACACCCTTCTCAAACGGAAATTTCGGAG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp AAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTAGAGGCCTTTGCCATATaGAGCAACAATGGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: KIGLVVFPTALVFWRLFLEAFAI*SNNGSK
Trigger: TTTGCTTCCATTGTTGCTCAATATGGCAAAGGCCTC...TAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCATCACATTGGTTGACTaGAGATTCCAAACCATTACT +
Preference number: 5 (lower is better)
Translates to: LSATFSHNLQRSCKGTRPITLVD*RFQTIT
Trigger: AGTAATGGTTTGGAATCTCAAGTCAACCAATGTGAT...GGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCATGAGCCACATAAAGTaGTGGGGTTCTAGGGATCTC +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAMSHIK*WGSRDL
Trigger: GAGATCCCTAGAACCCCACAACTTTATGTGGCTCAT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCCAGGAGAGGAATGGGTaGCCTATTTCTGGACACACT +
Preference number: 5 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSQERNG*PISGHT
Trigger: AGTGTGTCCAGAAATAGGCAACCCATTCCTCTCCTG...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS TCA 90 bp GATAAACTGTCCATGGATGATACACCCTGTGACTTCTTCACAGGCTaGTATGCTTTAGCAGAAGGTTGTTCCTGGCTACATGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: DKLSMDDTPCDFFTG*YALAEGCSWLHEDV
Trigger: CACATCTTCATGTAGCCAGGAACAACCTTCTGCTAAAGCATATCAGCCTGTGAAGAAGTCACAGGGTGTATCATCCATGGACAGTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS GCA 90 bp TCCCAAAAGGATATTCTGTCACTCACTCTTTTGTATTTCTCTCTCTaGACTTGGTTCTTGGGAACCTCACCAGCTTCTTGCTGGAATTGG +
Preference number: 5 (lower is better)
Translates to: SQKDILSLTLLYFSL*TWFLGTSPASCWNW
Trigger: CCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATACAAAAGAGTGAGTGACAGAATATCCTTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 90 bp CTGTTTCTTTTAATTCCTCAGGATGGCATTCAGAAGTGGCTCGCCTaGGCTCCTCTGTACTACCTATTAACTTTGATGGAGAAAGATTCC +
Preference number: 5 (lower is better)
Translates to: LFLLIPQDGIQKWLA*APLYYLLTLMEKDS
Trigger: GGAATCTTTCTCCATCAAAGTTAATAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAAAGAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 90 bp CCTTTTCTACTGTTTCTTTTAATTCCTCAGGATGGCATTCAGAAGTaGCTCGCCTGGGCTCCTCTGTACTACCTATTAACTTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: PFLLFLLIPQDGIQK*LAWAPLYYLLTLME
Trigger: CTCCATCAAAGTTAATAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAAAGAAACAGTAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACCATCAAAGTCTTATTTaGGCTCAGCAAAAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNHQSLI*AQQKFR
Trigger: CCTAAACTTTTGCTGAGCCAAAATAAGACTTTGATG...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGCTTCATAAAACCATaGGCCACTCATATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWGFIKP*ATHILQ
Trigger: CTGAAGAATATGAGTGGCCAATGGTTTTATGAAGCC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGACACATTTGGTTTCCTaGTGTTTTCCTGGGACATAT +
Preference number: 5 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVTHLVS*CFPGTY
Trigger: ATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTCTCTGGAGACACATTaGGTTTCCTTGTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCSLETH*VSLCFP
Trigger: AGGAAAACACAAGGAAACCAAATGTGTCTCCAGAGA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCTCTGGAGACACATTaGGTTTCCTTGTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWSLETH*VSLCFP
Trigger: AGGAAAACACAAGGAAACCAAATGTGTCTCCAGAGA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACAAGTATCTGCGACAGTaGACTTTTCTTTTGACTCTG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDKYLRQ*TFLLTL
Trigger: CAGAGTCAAAAGAAAAGTCAACTGTCGCAGATACTT...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATTCTCTAACTTTTGGATaGAAGTATCTGCGACAGTTG +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHSLTFG*KYLRQL
Trigger: CAACTGTCGCAGATACTTCAATCCAAAAGTTAGAGA...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACTCTCTAACTTTTGGATaGAAGTATCTGCGACAGTTG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDSLTFG*KYLRQL
Trigger: CAACTGTCGCAGATACTTCAATCCAAAAGTTAGAGA...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCAGGGAGTCTGTCCTTaGTCTAGGAAAAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASQGVCP*SRKRLV
Trigger: AACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQEFGEE*SSKECS
Trigger: GGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTC...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNEFGEE*SSKECS
Trigger: GGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTCGAAGGCTTTCTGTATaGAGAAGGCTTAGGGTCACT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASRRLSV*RRLRVT
Trigger: AGTGACCCTAAGCCTTCTCAATACAGAAAGCCTTCG...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGT +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWSDDLS*GSLMVG
Trigger: ACCAACCATCAATGAACCCAAAGATAAATCATCAGA...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCKWIIR*CRHCGN
Trigger: GTTTCCACAGTGCCTACACAACCTGATAATCCATTT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000525702.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGATCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAATCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTATCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: IFLRLFPTTYKGPARVPDAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...GTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: FFPQPTKVLQGYQTLLTVAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...CACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: ARVPDPLNCGTELWCETHRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...ATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGAATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: FSLQLLSSGDFSYLYLEGIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...TCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp CAGGTTTTCATCTTGCTTTCATCCATTCCTCACTGTGACTCTTCTTCATTAGCCAAGCCAACAACTGAATaGTACCTATGGCCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: QVFILLSSIPHCDSSSLAKPTTE*YLWPVG
Trigger: ACCCACTGGCCATAGGTACAATTCAGTTGTTGGCTT...GGCTAATGAAGAAGAGTCACAGTGAGGAATGGATGAAAGCAAGATGAAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp TACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGATGTCGCTGAATTCCTaGTGTTTCTGCCTATTAAAA +
Preference number: 5 (lower is better)
Translates to: YKGPARVPDPLNCGTELWMSLNS*CFCLLK
Trigger: TTTTAATAGGCAGAAACACAAGGAATTCAGCGACAT...CCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAGCTTCCTTCAGGAGTTaGTCTAGACTAGCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQASFRS*SRLAVK
Trigger: TTTGACTGCTAGTCTAGACAAACTCCTGAAGGAAGC...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTAGCTTCCTTCAGGAGTTaGTCTAGACTAGCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLASFRS*SRLAVK
Trigger: TTTGACTGCTAGTCTAGACAAACTCCTGAAGGAAGC...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CGACTTTTTCCCACAACCTACAAAGGTCCTGCAAGGGTACCAGACCCTCTTAACATCACATTGGTTGACTaGAGATTCCAAACCATTACT +
Preference number: 5 (lower is better)
Translates to: RLFPTTYKGPARVPDPLNITLVD*RFQTIT
Trigger: AGTAATGGTTTGGAATCTCAAGTCAACCAATGTGAT...GTTAAGAGGGTCTGGTACCCTTGCAGGACCTTTGTAGGTTGTGGGAAAAAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp TTCCCCTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCTTTGTAGAGTTTTCTTaGTTCATCAGGAGAGGAATG +
Preference number: 5 (lower is better)
Translates to: FPLAVVDQGIPSPRCALLFVEFS*FIRRGM
Trigger: CATTCCTCTCCTGATGAACAAAGAAAACTCTACAAA...GAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGCCACTCACCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAATHLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGGTGAGTGGC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389960.8
ENST00000530351.5
ENST00000532995.5
CDS TCA 90 bp CTTCACAGGCTGATATGCTTTAGCAGAAGGTTGTTCCTGGCTACATaGAGATGTGGGTTTTTCATGAGTTATCTTAGCACCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LHRLICFSRRLFLAT*RCGFFMSYLSTSFL
Trigger: GAGAAAGCTGGTGCTAAGATAACTCATGAAAAACCCACATCTTCATGTAGCCAGGAACAACCTTCTGCTAAAGCATATCAGCCTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 90 bp GGAGGACCTCATAAGCAAAGTTTCAGGTTTCCCACTACATGTCACTaGCTTTTAGCCATCAGCACATTGGTTTTCTATCTAATGGCTCCT +
Preference number: 5 (lower is better)
Translates to: GGPHKQSFRFPTTCH*LLAISTLVFYLMAP
Trigger: AGGAGCCATTAGATAGAAAACCAATGTGCTGATGGCTAAAAGTCAGTGACATGTAGTGGGAAACCTGAAACTTTGCTTATGAGGTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532221.5
CDS CCA 90 bp TTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTaGAAGGATGGTACTACAAAAAGAGGCATGATTGTGGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: FPYSSCLLATFPTCI*KDGTTKRGMIVGAF
Trigger: AAATGCTCCCACAATCATGCCTCTTTTTGTAGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525692.1
CDS CCA 90 bp TGGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCTTCTaGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACTACAAAAA +
Preference number: 5 (lower is better)
Translates to: WLKIGLVVFPTALVF*RLFLLVSGRMVLQK
Trigger: TTTTTGTAGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525692.1
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATCTTCATGATGGCCTCTaGTTCCTCTTCAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHLHDGL*FLFSQE
Trigger: TTCCTGACTGAAGAGGAACAAGAGGCCATCATGAAG...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGGCTTCATAAAACCATaGGCCACTCATATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPGFIKP*ATHILQ
Trigger: CTGAAGAATATGAGTGGCCAATGGTTTTATGAAGCC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGCTTCATAAAACCATaGGCCACTCATATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGFIKP*ATHILQ
Trigger: CTGAAGAATATGAGTGGCCAATGGTTTTATGAAGCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGTCCCTGTGCCTTTTaGCCTTGGCTTCATAAAACC +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFACPCAF*PWLHKT
Trigger: GGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGACA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATAGGAAAGCATCTTTGTaGACATTATTCACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDRKASL*TLFTQL
Trigger: AAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGGAAAGCATCTTTGTaGACATTATTCACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRKASL*TLFTQL
Trigger: AAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGRKAS*LTLFTQ
Trigger: CTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAGRKAS*LTLFTQ
Trigger: CTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATACACATTTGGTTTCCTaGTGTTTTCCTGGGACATAT +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDTHLVS*CFPGTY
Trigger: ATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTCTCTGGAGACACATTaGGTTTCCTTGTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLSLETH*VSLCFP
Trigger: AGGAAAACACAAGGAAACCAAATGTGTCTCCAGAGA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAAGTATCTGCGACAGTaGACTTTTCTTTTGACTCTG +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWKYLRQ*TFLLTL
Trigger: CAGAGTCAAAAGAAAAGTCAACTGTCGCAGATACTT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCCTGGCAAAGTCTGCTTaGATTTCTCTAACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCLAKSA*ISLTFG
Trigger: TCCAAAAGTTAGAGAAATCAAAGCAGACTTTGCCAG...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGCTGGCAAAGTCTGCTTaGATTTCTCTAACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLAKSA*ISLTFG
Trigger: TCCAAAAGTTAGAGAAATCAAAGCAGACTTTGCCAG...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTATCATCTTCCTGGCTTaGGGGATTGGAGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAIIFLA*GIGALI
Trigger: AATCAAGGCTCCAATCCCCAAAGCCAGGAAGATGAT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCCAGGTGACACAATTTaGCTTTTGGGTTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIPGDTI*LLGSKL
Trigger: CAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGG...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGCATATGGGCTTGAGGTaGATTGATGAAAAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRHMGLR*IDEKAK
Trigger: CTTCGCTTTTTCATCAATCAACCTCAAGCCCATATG...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGCATATGGGCTTGAGGTaGATTGATGAAAAAGCGAAG +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLHMGLR*IDEKAK
Trigger: CTTCGCTTTTTCATCAATCAACCTCAAGCCCATATG...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAAGAACCAGAAGTCATaGGCTGATGTGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWKNQKS*ADVFHF
Trigger: AAAGTGAAACACATCAGCCAATGACTTCTGGTTCTT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWLSLGS*MVGEFS
Trigger: GGAGAATTCACCAACCATCAATGAACCCAAAGATAA...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGANAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQNAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TACACCATAGTGTGGTTGAAGATAGGGTTGGTGGTTTTCCCTACAGCTCTTGTCGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: YTIVWLKIGLVVFPTALVGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...GACAAGAGCTGTAGGGAAAACCACCAACCCTATCTTCAACCACACTATGGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGANCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTTTCCACATTTTCCTTaGATGACTCATTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LHFEYLSATFSHNLQRSCFPHFP*MTHFLA
Trigger: TGCCAGGAAATGAGTCATCAAAGGAAAATGTGGAAA...GCAGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGCTCATTTTTTCCACATTTTCCTTaGATGACTCATTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FHRFSSFQWRSQWNLGSFFPHFP*MTHFLA
Trigger: TGCCAGGAAATGAGTCATCAAAGGAAAATGTGGAAA...AAATGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATATGAGCCACATAAAGTaGTGGGGTTCTAGGGATCTC +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHMSHIK*WGSRDL
Trigger: GAGATCCCTAGAACCCCACAACTTTATGTGGCTCAT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp AGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: RSDSTGLVVFSGGASGIWKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...CCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GCAGTGTTGCTTCAATCCAAGTATTGGGGGAGTTTACCATCTTCTCCCAGAGAGGCTGATTATCTACTTTaGCTTGATCTGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: AVLLQSKYWGSLPSSPREADYLL*LDLFRR
Trigger: TCTTCTGAACAGATCAAGCAAAAGTAGATAATCAGC...CTCTCTGGGAGAAGATGGTAAACTCCCCCAATACTTGGATTGAAGCAACACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTAGCAGTGGTAGATCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTCTCAGGAGGGCAACATaGAGAATAAATACCATTTTA +
Preference number: 5 (lower is better)
Translates to: LSSGRSRHSFTQMCTSPVLRRAT*RINTIL
Trigger: TAAAATGGTATTTATTCTCAATGTTGCCCTCCTGAG...AACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGATCTACCACTGCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS TCA 90 bp TCAAATTCTGTGTGCTTAGCTGGCACTCACCACTTTCAGCTTTCTTaGGGAGAGCTGTATTTCCAAAAGTTTCATCTCTCACTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SNSVCLAGTHHFQLS*GELYFQKFHLSLEK
Trigger: CTTTTCCAGTGAGAGATGAAACTTTTGGAAATACAGCTCTCCTCAAGAAAGCTGAAAGTGGTGAGTGCCAGCTAAGCACACAGAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS TCA 90 bp GTAATGCAGCACTTACATCATTCAATACAGGTCTGGGTGGAAGAATaGCTTTCTCTACAGTCTCCGAAATTTCCGTTTGAGAAGGGTGTA +
Preference number: 5 (lower is better)
Translates to: VMQHLHHSIQVWVEE*LSLQSPKFPFEKGV
Trigger: TACACCCTTCTCAAACGGAAATTTCGGAGACTGTAGAGAAAGTCATTCTTCCACCCAGACCTGTATTGAATGATGTAAGTGCTGCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS GCA 90 bp TTGAATCTTGGCTATAGTCCATATTTTTACTCCCTTGACTTGGGGTaGCATAGCTTTCAAATGGTTGCAATATACCTGGGCCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LNLGYSPYFYSLDLG*HSFQMVAIYLGLPL
Trigger: CAAAGGAAGGCCCAGGTATATTGCAACCATTTGAAAGCTATGGCACCCCAAGTCAAGGGAGTAAAAATATGGACTATAGCCAAGATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 90 bp ATTAACAAATATTTGTGTGTGTGCATCATCATTCACATATGCCTCTaGGAGGCTTGCTTGGGAAGTCAACTGAAGAGATGTAACTGGGGA +
Preference number: 5 (lower is better)
Translates to: INKYLCVCIIIHICL*EACLGSQLKRCNWG
Trigger: TCCCCAGTTACATCTCTTCAGTTGACTTCCCAAGCAAGCCTCCCAGAGGCATATGTGAATGATGATGCACACACACAAATATTTGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATCATCAAAGTCTTATTTaGGCTCAGCAAAAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDHQSLI*AQQKFR
Trigger: CCTAAACTTTTGCTGAGCCAAAATAAGACTTTGATG...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATAGGAAAGCATCTTTGTaGACATTATTCACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNRKASL*TLFTQL
Trigger: AAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASGRKAS*LTLFTQ
Trigger: CTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CCAACAACTGAATTGTACCTATGGCCAGTGGGTGGCACTAAAATACATTTGAGGACACATTTGGTTTCCTaGTGTTTTCCTGGGACATAT +
Preference number: 5 (lower is better)
Translates to: PTTELYLWPVGGTKIHLRTHLVS*CFPGTY
Trigger: ATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT...CCTCAAATGTATTTTAGTGCCACCCACTGGCCATAGGTACAATTCAGTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCTCTAACTTTTGGATaGAAGTATCTGCGACAGTTG +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISLTFG*KYLRQL
Trigger: CAACTGTCGCAGATACTTCAATCCAAAAGTTAGAGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATCTGGCAAAGTCTGCTTaGATTTCTCTAACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNLAKSA*ISLTFG
Trigger: TCCAAAAGTTAGAGAAATCAAAGCAGACTTTGCCAG...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAAGAACCAGAAGTCATaGGCTGATGTGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLKNQKS*ADVFHF
Trigger: AAAGTGAAACACATCAGCCAATGACTTCTGGTTCTT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLLSLGS*MVGEFS
Trigger: GGAGAATTCACCAACCATCAATGAACCCAAAGATAA...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASKWIIR*CRHCGN
Trigger: GTTTCCACAGTGCCTACACAACCTGATAATCCATTT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000525702.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGCCAGTGGAATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAATGCTGGAACAGACTaGCTCATCCTTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SQWNLGSFGNLGNQKHSENAGTD*LILLSL
Trigger: CAAACTCAAAAGGATGAGCAAGTCTGTTCCAGCATT...CTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCCACTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTGTCATCACTCTCATCTaGGAGAAATGCTGGAACAGA +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAVITLI*EKCWNR
Trigger: TCTGTTCCAGCATTTCTCCAAGATGAGAGTGATGAC...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389959.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCTTCAATCCAAGTATaGGGGGAGTTTACCATCTTC +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGASIQV*GEFTIF
Trigger: GAAGATGGTAAACTCCCCCAATACTTGGATTGAAGC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGAGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGGAGCCAGTGGAATTaGGGCTCATTTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRSQWN*GSFGNL
Trigger: AAGATTTCCAAATGAGCCCAAATTCCACTGGCTCCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGAAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: FSLQLLSSGDFSYLYLEGRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...TCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGIRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: LRFSRSDSTGLVVFSGGARSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...GGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp AAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTGAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KIRFHRFSSFQWRSQWNLRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...CAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTATTCCCTGCTCCACTTaGAGTATCTTTCTGCGACTT +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAIPCST*SIFLRL
Trigger: AAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAAT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ATTGTTTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCTCCGAAATTTCCGTTaGAGAAGGGTGTACCCTAGC +
Preference number: 5 (lower is better)
Translates to: IVYSVCYPSPMFPNQVPPLRNFR*RRVYPS
Trigger: GCTAGGGTACACCCTTCTCAAACGGAAATTTCGGAG...AGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp AGGGTACCAGACCCTCTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATTTTGTAGAGTTTTCTTaGTTCATCAGGAGAGGAATG +
Preference number: 5 (lower is better)
Translates to: RVPDPLNCGTELWCETHDFVEFS*FIRRGM
Trigger: CATTCCTCTCCTGATGAACAAAGAAAACTCTACAAA...ATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAGAGGGTCTGGTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp TCAAGGCATTCCTTCACCCAGATGTGCACTTCTCCAGTTGTAGGAAGCTTTTTATTCTTCCTCTTTCTCTaGTTTCATATATGGCGATGC +
Preference number: 5 (lower is better)
Translates to: SRHSFTQMCTSPVVGSFLFFLFL*FHIWRC
Trigger: GCATCGCCATATATGAAACAAGAGAAAGAGGAAGAA...TAAAAAGCTTCCTACAACTGGAGAAGTGCACATCTGGGTGAAGGAATGCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTTTCTTCCTCTTTCTCTaGTTTCATATATGGCGATGC +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPFFLFL*FHIWRC
Trigger: GCATCGCCATATATGAAACAAGAGAAAGAGGAAGAA...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000527523.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp TGGTTTTCCCTACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: WFSLQLLSSGDFSYLYLEKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...TTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGTAGGGAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS TCA 90 bp GGTGAATTCTCCATAGACTGTGGTCTTGCAGTTAAAACTTCTGAATaGGAATGCAGCCCATTAATTGGAAAAGAACCAGAAGTCATTGGC +
Preference number: 5 (lower is better)
Translates to: GEFSIDCGLAVKTSE*ECSPLIGKEPEVIG
Trigger: GCCAATGACTTCTGGTTCTTTTCCAATTAATGGGCTGCATTCTCATTCAGAAGTTTTAACTGCAAGACCACAGTCTATGGAGAATTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 90 bp ACTCTCTTCTTTCCTAGGCAGTTCTTAAGAATTTGTCAAGTCATGTaGCAAAGTTCAGCACCTTCACATCTTCAGCACTACGCACTAATT +
Preference number: 5 (lower is better)
Translates to: TLFFPRQFLRICQVM*QSSAPSHLQHYALI
Trigger: AATTAGTGCGTAGTGCTGAAGATGTGAAGGTGCTGAACTTTGGCACATGACTTGACAAATTCTTAAGAACTGCCTAGGAAAGAAGAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528566.1
CDS CCA 90 bp GAAGAGTTGTCTTCTAAAGAATGCTCCTTCTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGACACAATTTTGCTTTTGGGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: EELSSKECSFSEILS*MVRPGDTILLLGSK
Trigger: CTTTGAACCCAAAAGCAAAATTGTGTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAGAAGACAACTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 90 bp TTATTATCTTGGCAACTTTCAGAAACCAGCATATCTCCCTCTGCTTaGAATGGTGAGTCAGATCTCACAGGCTTCAATTCAATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSWQLSETSISPSA*NGESDLTGFNSILL
Trigger: CAGCAAAATTGAATTGAAGCCTGTGAGATCTGACTCACCATTCCAAGCAGAGGGAGATATGCTGGTTTCTGAAAGTTGCCAAGATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS-3UTR CAA 90 bp TTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGACATCAAAGTCTTATTTaGGCTCAGCAAAAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: FSRSDSTGLVVFSGGASGHQSLI*AQQKFR
Trigger: CCTAAACTTTTGCTGAGCCAAAATAAGACTTTGATG...TCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATGGCTTCATAAAACCATaGGCCACTCATATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHGFIKP*ATHILQ
Trigger: CTGAAGAATATGAGTGGCCAATGGTTTTATGAAGCC...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTACACATTTGGTTTCCTaGTGTTTTCCTGGGACATAT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASTHLVS*CFPGTY
Trigger: ATATGTCCCAGGAAAACACAAGGAAACCAAATGTGT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTCTCTGGAGACACATTaGGTTTCCTTGTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHSLETH*VSLCFP
Trigger: AGGAAAACACAAGGAAACCAAATGTGTCTCCAGAGA...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTCTGGAGACACATTaGGTTTCCTTGTGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFASLETH*VSLCFP
Trigger: AGGAAAACACAAGGAAACCAAATGTGTCTCCAGAGA...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAAGTATCTGCGACAGTaGACTTTTCTTTTGACTCTG +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASKYLRQ*TFLLTL
Trigger: CAGAGTCAAAAGAAAAGTCAACTGTCGCAGATACTT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTCCAGGTGACACAATTTaGCTTTTGGGTTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAPGDTI*LLGSKL
Trigger: CAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGG...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAAGAACCAGAAGTCATaGGCTGATGTGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASKNQKS*ADVFHF
Trigger: AAAGTGAAACACATCAGCCAATGACTTCTGGTTCTT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASLSLGS*MVGEFS
Trigger: GGAGAATTCACCAACCATCAATGAACCCAAAGATAA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SRSDSTGLVVFSGGASGISDDLS*GSLMVG
Trigger: ACCAACCATCAATGAACCCAAAGATAAATCATCAGA...AATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGGAATTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGT +
Preference number: 5 (lower is better)
Translates to: FKIRFHRFSSFQWRSQWNSDDLS*GSLMVG
Trigger: ACCAACCATCAATGAACCCAAAGATAAATCATCAGA...ATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp GCTGTCTTCCGCTTCAGAGGGTACCATCTCAATTGTTTATTCTGTTTGTTATCCGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: AVFRFRGYHLNCLFCLLSAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...GGATAACAAACAGAATAAACAATTGAGATGGTACCCTCTGAAGCGGAAGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAACTGTGGCACAGAATaGTGGTGTGAAACACATGAT +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHNCGTE*WCETHD
Trigger: ATCATGTGTTTCACACCACAATTCTGTGCCACAGTT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ACAGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTGGAAGGATGGTACATATGTCGCTGAATTCCTaGTGTTTCTGCCTATTAAAA +
Preference number: 5 (lower is better)
Translates to: TALVFWRLFLLVSGRMVHMSLNS*CFCLLK
Trigger: TTTTAATAGGCAGAAACACAAGGAATTCAGCGACAT...ATGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp CATTCCCTGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAATCACATTGGTTGACTaGAGATTCCAAACCATTACT +
Preference number: 5 (lower is better)
Translates to: HSLLHFEYLSATFSHNLQITLVD*RFQTIT
Trigger: AGTAATGGTTTGGAATCTCAAGTCAACCAATGTGAT...TTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCAGGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS-3UTR CAA 90 bp TGCTCCACTTTGAGTATCTTTCTGCGACTTTTTCCCACAACCTACAAAGGTCCTGCTGATTATCTACTTTaGCTTGATCTGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: CSTLSIFLRLFPTTYKGPADYLL*LDLFRR
Trigger: TCTTCTGAACAGATCAAGCAAAAGTAGATAATCAGC...AGGACCTTTGTAGGTTGTGGGAAAAAGTCGCAGAAAGATACTCAAAGTGGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389958.7
ENST00000532995.5
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTGAACTGGAGCTGCACTaGAATCAAATTATACTGTCA +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASELELH*NQIILS
Trigger: TGACAGTATAATTTGATTCAAGTGCAGCTCCAGTTC...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS TCA 90 bp GTCACAAGTGCGTCTCCTCCCAACATTTTATCACATTGGTTGACTTaGGATTCCAAACCATTACTTTTATCCTTCATTTCAGAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: VTSASPPNILSHWLT*DSKPLLLSFISEVC
Trigger: ACAGACCTCTGAAATGAAGGATAAAAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGATAAAATGTTGGGAGGAGACGCACTTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CCA 90 bp AGTTGTCTTCTAAAGAATGCTCCTTCTCAGAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAATTTTGCTTTTGGGTTCAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SCLLKNAPSQKFSHG*LGQVTQFCFWVQSC
Trigger: ACAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAGAAGACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGAGGATGCTGTATTCCTaGCCAAACAGGTCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLRMLYS*PNRSLV
Trigger: AACAAGCGACCTGTTTGGCAAGGAATACAGCATCCT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATAGGAAAGCATCTTTGTaGACATTATTCACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHRKASL*TLFTQL
Trigger: AAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTAAGTATCTGCGACAGTaGACTTTTCTTTTGACTCTG +
Preference number: 5 (lower is better)
Translates to: CGTELWCETHDGKQEHFAKYLRQ*TFLLTL
Trigger: CAGAGTCAAAAGAAAAGTCAACTGTCGCAGATACTT...AGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTTCTCTAACTTTTGGATaGAAGTATCTGCGACAGTTG +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLSLTFG*KYLRQL
Trigger: CAACTGTCGCAGATACTTCAATCCAAAAGTTAGAGA...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTCTGGCAAAGTCTGCTTaGATTTCTCTAACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLLAKSA*ISLTFG
Trigger: TCCAAAAGTTAGAGAAATCAAAGCAGACTTTGCCAG...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGGCGACTTTTCCTACTaGTATCTGGAAGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLGDFSY*YLEGWY
Trigger: GTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTGGTTGAAGATAGGGTaGGTGGTTTTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLWLKIG*VVFPTA
Trigger: AGCTGTAGGGAAAACCACCAACCCTATCTTCAACCA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp ATTTGGGCTCATTTGGAAATCTTGGCAATCAAAAGCATTCTGAGAGGCAGTGTTGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: IWAHLEILAIKSILRGSVAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...AACACTGCCTCTCAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGCCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389959.8
ENST00000532995.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000527523.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp CTTAACTGTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATACTTGGTTCAAGCACTaGTTTTCCATGAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: LNCGTELWCETHDGKQEHTWFKH*FSMNFS
Trigger: GGAAAAGTTCATGGAAAACAAGTGCTTGAACCAAGT...ATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCACAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp AGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGAGCCAGTTACTACCTATTAACTTaGATGGAGAAAGATTCCCTG +
Preference number: 5 (lower is better)
Translates to: RFSRSDSTGLVVFSGGASYYLLT*MEKDSL
Trigger: CAGGGAATCTTTCTCCATCAAAGTTAATAGGTAGTA...ACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354566.7
ENST00000389959.8
CDS-3UTR CAA 90 bp TTATTCTGTTTGTTATCCCAGTCCCATGTTTCCAAATCAAGTTCCACCTCCCCTTACTACCTATTAACTTaGATGGAGAAAGATTCCCTG +
Preference number: 5 (lower is better)
Translates to: LFCLLSQSHVSKSSSTSPYYLLT*MEKDSL
Trigger: CAGGGAATCTTTCTCCATCAAAGTTAATAGGTAGTA...AGGGGAGGTGGAACTTGATTTGGAAACATGGGACTGGGATAACAAACAGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389959.8
CDS-3UTR CAA 90 bp GTGGCACAGAATTGTGGTGTGAAACACATGATGGCAAACAAGAACATTTTGCTTAAATGGATTATCAGGTaGTGTAGGCACTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VAQNCGVKHMMANKNILLKWIIR*CRHCGN
Trigger: ATTTCCACAGTGCCTACACAACCTGATAATCCATTT...AAGCAAAATGTTCTTGTTTGCCATCATGTGTTTCACACCACAATTCTGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000389960.8
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS TCA 90 bp AATCAGTCACAAGTGCGTCTCCTCCCAACATTTTATCACATTGGTTaGCTTGAGATTCCAAACCATTACTTTTATCCTTCATTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NQSQVRLLPTFYHIG*LEIPNHYFYPSFQR
Trigger: CCTCTGAAATGAAGGATAAAAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGATAAAATGTTGGGAGGAGACGCACTTGTGACTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CCA 90 bp CAGCTAAATAAGATCCAACTTCATGAGTTTTATCAGGAACTACATTaGAGGAATAAAAATCCTTCCTGTCTGGAACTATGGTGTCCATCG +
Preference number: 5 (lower is better)
Translates to: QLNKIQLHEFYQELH*RNKNPSCLELWCPS
Trigger: CGATGGACACCATAGTTCCAGACAGGAAGGATTTTTATTCCTCCAATGTAGTTCCTGATAAAACTCATGAAGTTGGATCTTATTTAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 90 bp GTAAAGGGTATGATGCTAGCCATGACTAACACCTTCCCAAACCCATaGTCATTAACAAATATTTGTGTGTGTGCATCATCATTCACATAT +
Preference number: 5 (lower is better)
Translates to: VKGMMLAMTNTFPNP*SLTNICVCASSFTY
Trigger: ATATGTGAATGATGATGCACACACACAAATATTTGTTAATGACCATGGGTTTGGGAAGGTGTTAGTCATGGCTAGCATCATACCCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS-3UTR CAA 90 bp CTACTCAGATTTTCAAGATCAGATTCCACCGGTTTAGTAGTTTTCAGTGGAGGATCTGATGATTTATCTTaGGGTTCATTGATGGTTGGT +
Preference number: 5 (lower is better)
Translates to: LLRFSRSDSTGLVVFSGGSDDLS*GSLMVG
Trigger: ACCAACCATCAATGAACCCAAAGATAAATCATCAGA...TCCTCCACTGAAAACTACTAAACCGGTGGAATCTGATCTTGAAAATCTGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000527523.5
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTCCCCTAGGAAACTATaGCGCTTAAATGTATCCCGA +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLSPRKL*RLNVSR
Trigger: TCGGGATACATTTAAGCGCAATAGTTTCCTAGGGGA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTACACCATAGTGTGGTaGAAGATAGGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLYTIVW*KIGLVV
Trigger: AACCACCAACCCTATCTTCAACCACACTATGGTGTA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCCAGGTGACACAATTTaGCTTTTGGGTTCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLPGDTI*LLGSKL
Trigger: CAACTTTGAACCCAAAAGCAAAATTGTGTCACCTGG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTCTTCTTGCCCATTTaGCCTTTGTCTGGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFFLPI*PLSGSK
Trigger: TTTGCTACCAGACAAAGGCAAAATGGGCAAGAAGAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGCTGGCAAAGTCTGCTTaGATTTCTCTAACTTTTGGA +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLLAKSA*ISLTFG
Trigger: TCCAAAAGTTAGAGAAATCAAAGCAGACTTTGCCAG...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLLSLGS*MVGEFS
Trigger: GGAGAATTCACCAACCATCAATGAACCCAAAGATAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGCTCATTTGGAAATCTaGGCAATCAAAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLAHLEI*AIKSIL
Trigger: CAGAATGCTTTTGATTGCCAAGATTTCCAAATGAGC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGGGAATTTGGGCTCATTaGGAAATCTTGGCAATCAAA +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLGIWAH*EILAIK
Trigger: TTTGATTGCCAAGATTTCCAAATGAGCCCAAATTCC...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGAGAAGCACATGCAGATaGACTTTTACATGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLRSTCR*TFTCCV
Trigger: TACACAGCATGTAAAAGTCAATCTGCATGTGCTTCT...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316356.8
ENST00000354566.7
ENST00000359152.9
ENST00000389958.7
ENST00000389959.8
ENST00000389960.8
ENST00000525702.5
ENST00000528231.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTCTTCCTCTTTCTCTaGTTTCATATATGGCGATGC +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFFLFL*FHIWRC
Trigger: GCATCGCCATATATGAAACAAGAGAAAGAGGAAGAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS TCA 90 bp TTGAATTTAAGATTTTACCAGTTGTGCCCAGAGAGATCTAAATGCTaGGACTTGAGAATCAAACAGAAGAATAACTTAACCCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: LNLRFYQLCPERSKC*DLRIKQKNNLTQEF
Trigger: GAATTCCTGGGTTAAGTTATTCTTCTGTTTGATTCTCAAGTCTCAGCATTTAGATCTCTCTGGGCACAACTGGTAAAATCTTAAATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524911.5
CDS-3UTR CAA 90 bp TTTGTTATATTTAAATCCCTTGGGCCTTGTAATCAAAGAAGCACATGCAGATTGTTTGTAGAGTTTTCTTaGTTCATCAGGAGAGGAATG +
Preference number: 5 (lower is better)
Translates to: FVIFKSLGPCNQRSTCRLFVEFS*FIRRGM
Trigger: CATTCCTCTCCTGATGAACAAAGAAAACTCTACAAA...CAATCTGCATGTGCTTCTTTGATTACAAGGCCCAAGGGATTTAAATATAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000530351.5
CDS CAA 90 bp CGCGCAGCCCCGGGCGCGGCGCGTTACCTTCCCCCGGGCAAGGCGTaGCGAGCCTTCACTCTCCCGACGGACGCTGGCGGCACGGCCCGG +
Preference number: 6 (lower is better)
Translates to: RAAPGAARYLPPGKA*RAFTLPTDAGGTAR
Trigger: CCGGGCCGTGCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGGAAGGTAACGCGCCGCGCCCGGGGCTGCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CCA 72 bp CCGTCTCTCTTGTCTTCTGGCCCCCAGCCCTCGGCCTaGCGGTGCAAACCGCGCAGCCCCGGGCGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: PSLLSSGPQPSA*RCKPRSPGRGA
Trigger: CGCGCCGCGCCCGGGGCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CAA 72 bp CCGGGCGCGGCGCGTTACCTTCCCCCGGGCAAGGCGTaGCGAGCCTTCACTCTCCCGACGGACGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: PGAARYLPPGKA*RAFTLPTDAGG
Trigger: GCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGGAAGGTAACGCGCCGCGCCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS GCA 72 bp CGGGCGCGGCGCGTTACCTTCCCCCGGGCAAGGCGTTaGGAGCCTTCACTCTCCCGACGGACGCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RARRVTFPRARR*EPSLSRRTLAA
Trigger: TGCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTGCCCGGGGGAAGGTAACGCGCCGCGCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS GCA 72 bp CTCTTGTCTTCTGGCCCCCAGCCCTCGGCCTGGCGGTaGAAACCGCGCAGCCCCGGGCGCGGCGCGTTACCT +
Preference number: 6 (lower is better)
Translates to: LLSSGPQPSAWR*KPRSPGRGALP
Trigger: AGGTAACGCGCCGCGCCCGGGGCTGCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CCA 72 bp GGGCAGGGAGCGCGCCTCGCCGTCTCTCTTGTCTTCTaGCCCCCAGCCCTCGGCCTGGCGGTGCAAACCGCG +
Preference number: 6 (lower is better)
Translates to: GQGARLAVSLVF*PPALGLAVQTA
Trigger: CGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGCGCGCTCCCTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
ENST00000527523.5
CDS CAA 90 bp ACCTCCGAGTCGCTGCCGGGCAGGGAGCGCGCCTCGCCGTCTCTCTaGTCTTCTGGCCCCCAGCCCTCGGCCTGGCGGTGCAAACCGCGC +
Preference number: 6 (lower is better)
Translates to: TSESLPGRERASPSL*SSGPQPSAWRCKPR
Trigger: GCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGCGCGCTCCCTGCCCGGCAGCGACTCGGAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316356.8
ENST00000389960.8
ENST00000524830.1
CDS CAA 90 bp GTCTCCGAGTCGCTGCCGGGCAGGGAGCGCGCCTCGCCGTCTCTCTaGTCTTCTGGCCCCCAGCCCTCGGCCTGGCGGTGCAAACCGCGC +
Preference number: 6 (lower is better)
Translates to: VSESLPGRERASPSL*SSGPQPSAWRCKPR
Trigger: GCGCGGTTTGCACCGCCAGGCCGAGGGCTGGGGGCCAGAAGACAAGAGAGACGGCGAGGCGCGCTCCCTGCCCGGCAGCGACTCGGAGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527523.5
CDS CCA 72 bp CAAGGCGTTGCGAGCCTTCACTCTCCCGACGGACGCTaGCGGCACGGCCCGGGTGTCGCCCGGCACTGTCAA +
Preference number: 6 (lower is better)
Translates to: QGVASLHSPDGR*RHGPGVARHCQ
Trigger: TTGACAGTGCCGGGCGACACCCGGGCCGTGCCGCCAGCGTCCGTCGGGAGAGTGAAGGCTCGCAACGCCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389960.8
CDS CAA 72 bp CGAAGGGTTTCTGAGTCTGTGCTACTGGAACTGGAGTaGCGCTTGAGGATCCCTCTCGGAGCCCCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: RRVSESVLLELE*RLRIPLGAPLA
Trigger: AGCGAGAGGGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAGCACAGACTCAGAAACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 72 bp GTTTCTGAGTCTGTGCTACTGGAACTGGAGTTGCGCTaGAGGATCCCTCTCGGAGCCCCTCTCGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: VSESVLLELELR*RIPLGAPLAFR
Trigger: CCTGAAAGCGAGAGGGGCTCCGAGAGGGATCCTCAAGCGCAACTCCAGTTCCAGTAGCACAGACTCAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp GGGCTTACCTTGCTGACGGTCTCTAGAACTGCCACCTaGCACCTGAGATGGCTCAGGCTCAACACAATGAGA +
Preference number: 6 (lower is better)
Translates to: GLTLLTVSRTAT*HLRWLRLNTMR
Trigger: TCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAGCAAGGTAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS GCA 72 bp TGGATTTACCACACTGGAACTCGGGCTTGCTGGTGCTaGATCTTCTTCTGGCTCTTCTACAACGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: WIYHTGTRACWC*IFFWLFYNASQ
Trigger: CTGGCTGGCGTTGTAGAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 72 bp AGCTGGATTTACCACACTGGAACTCGGGCTTGCTGGTaGTGCATCTTCTTCTGGCTCTTCTACAACGCCAGC +
Preference number: 6 (lower is better)
Translates to: SWIYHTGTRACW*CIFFWLFYNAS
Trigger: GCTGGCGTTGTAGAAGAGCCAGAAGAAGATGCAGCACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp CTGACGGTCTCTAGAACTGCCACCTGGCACCTGAGATaGCTCAGGCTCAACACAATGAGACAGTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: LTVSRTATWHLR*LRLNTMRQFIS
Trigger: GCTGATGAACTGTCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp CTGACGGTCTCTAGAACTGCCACCTGGCACCTGAGATaGCTCAGGCTCAACACAATGAGACAGTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: LTVSRTATWHLR*LRLNTMRQFIC
Trigger: GCAGATGAACTGTCTCATTGTGTTGAGCCTGAGCCATCTCAGGTGCCAGGTGGCAGTTCTAGAGACCGTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525423.5
CDS CAA 90 bp CCCTCTTCCAGCTTAGAGTTGGTTCCAGTGATAACAGGCGCCAACTaGGCTTGCAAGGGAGAGGGTGAAGTTCCAGTTGCTTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PSSSLELVPVITGAN*ACKGEGEVPVASFR
Trigger: CCTGAAGGAAGCAACTGGAACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTATCACTGGAACCAACTCTAAGCTGGAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp GGACCAGCTGCTAAGTGGAATCTTGGCAGGCTAGTGTaGGAGTGGGTATCAGTATTTGGAAGGGAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: GPAAKWNLGRLV*EWVSVFGRERA
Trigger: TGCACGCTCCCTTCCAAATACTGATACCCACTCTCACACTAGCCTGCCAAGATTCCACTTAGCAGCTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS GCA 72 bp GAGTTGGTTCCAGTGATAACAGGCGCCAACTTGGCTTaGAAGGGAGAGGGTGAAGTTCCAGTTGCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: ELVPVITGANLA*KGEGEVPVASF
Trigger: GAAGGAAGCAACTGGAACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTATCACTGGAACCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp TGCTGTATTCCTTGCCAAACAGGTCGCTTGTTCCTATaGTGGCTTCCAGCACACTCACTCTCTGGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: CCIPCQTGRLFL*WLPAHSLSGPV
Trigger: GACTGGACCAGAGAGTGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS CCA 72 bp GGGGCTACATACTGGCTGTACTGCTTCAGGAAATTCTaGGTTCACTTCTCCAGGACCTACTTCCCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: GATYWLYCFRKF*VHFSRTYFPSS
Trigger: GCTGGAAGGGAAGTAGGTCCTGGAGAAGTGAACCCAGAATTTCCTGAAGCAGTACAGCCAGTATGTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp TGCACTTGGTTCTTGGGAACCTCACCAGCTTCTTGCTaGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: CTWFLGTSPASC*NWTSGFFQGEP
Trigger: TGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp AAGAGGCTCTCAGAAGGATGCTGTATTCCTTGCCAAACAGGTCGCTaGTTCCTATGGTGGCTTCCAGCACACTCACTCTCTGGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: KRLSEGCCIPCQTGR*FLWWLPAHSLSGPV
Trigger: GACTGGACCAGAGAGTGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACAGCATCCTTCTGAGAGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS CAA 72 bp AGCTTAGAGTTGGTTCCAGTGATAACAGGCGCCAACTaGGCTTGCAAGGGAGAGGGTGAAGTTCCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: SLELVPVITGAN*ACKGEGEVPVA
Trigger: AGCAACTGGAACTTCACCCTCTCCCTTGCAAGCCAAGTTGGCGCCTGTTATCACTGGAACCAACTCTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp TCTCTGCACTTGGTTCTTGGGAACCTCACCAGCTTCTaGCTGGAATTGGACCTCAGGCTTCTTCCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SLHLVLGNLTSF*LELDLRLLPRR
Trigger: TCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp TGTATTCCTTGCCAAACAGGTCGCTTGTTCCTATGGTaGCTTCCAGCACACTCACTCTCTGGTCCAGTCTTA +
Preference number: 6 (lower is better)
Translates to: CIPCQTGRLFLW*LPAHSLSGPVL
Trigger: TAAGACTGGACCAGAGAGTGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS CCA 72 bp TGTGTTTTCCTGGGACATATCAATCACACTGGAAGCTaGATTTACCACACTGGAACTCGGGCTTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: CVFLGHINHTGS*IYHTGTRACWC
Trigger: GCACCAGCAAGCCCGAGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp TTTACTCCCTTGACTTGGGGTGCCATAGCTTTCAAATaGTTGCAATATACCTGGGCCTTCCTTTGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: FTPLTWGAIAFK*LQYTWAFLWGA
Trigger: GGCACCCCAAAGGAAGGCCCAGGTATATTGCAACCATTTGAAAGCTATGGCACCCCAAGTCAAGGGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp TCAGAAGGATGCTGTATTCCTTGCCAAACAGGTCGCTaGTTCCTATGGTGGCTTCCAGCACACTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: SEGCCIPCQTGR*FLWWLPAHSLS
Trigger: AGAGAGTGAGTGTGCTGGAAGCCACCATAGGAACAAGCGACCTGTTTGGCAAGGAATACAGCATCCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
CDS CAA 72 bp ACTCCCTTGACTTGGGGTGCCATAGCTTTCAAATGGTaGCAATATACCTGGGCCTTCCTTTGGGGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: TPLTWGAIAFKW*QYTWAFLWGAF
Trigger: AAAGGCACCCCAAAGGAAGGCCCAGGTATATTGCAACCATTTGAAAGCTATGGCACCCCAAGTCAAGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp GGCTCTTCTACAACGCCAGCCAGCTCTGGAGGAAGGAAAGCATCTTaGTTGACATTATTCACCCAGCTTTCCTTTGCCCCATTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: GSSTTPASSGGRKAS*LTLFTQLSFAPFSL
Trigger: CAGAGAAAATGGGGCAAAGGAAAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCTTCCTCCAGAGCTGGCTGGCGTTGTAGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 90 bp TCTGGGTGGAAGAATGACTTTCTCTACAGTCTCCGAAATTTCCGTTaGAGAAGGGTGTACCCTAGCCTGGGGAACAAGATGAGCATCCTG +
Preference number: 6 (lower is better)
Translates to: SGWKNDFLYSLRNFR*RRVYPSLGNKMSIL
Trigger: CAGGATGCTCATCTTGTTCCCCAGGCTAGGGTACACCCTTCTCAAACGGAAATTTCGGAGACTGTAGAGAAAGTCATTCTTCCACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp TTGTGTGTGTGCATCATCATTCACATATGCCTCTGGGAGGCTTGCTaGGGAAGTCAACTGAAGAGATGTAACTGGGGACCAGCTGCTAAG +
Preference number: 6 (lower is better)
Translates to: LCVCIIIHICLWEAC*GSQLKRCNWGPAAK
Trigger: CTTAGCAGCTGGTCCCCAGTTACATCTCTTCAGTTGACTTCCCAAGCAAGCCTCCCAGAGGCATATGTGAATGATGATGCACACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS CAA 90 bp TCTTGCTGGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATTGTaGGCAACCCCAGGTGTTGACTTAATATTCTCTGGCTCTAAGGAG +
Preference number: 6 (lower is better)
Translates to: SCWNWTSGFFQGEPL*ATPGVDLIFSGSKE
Trigger: CTCCTTAGAGCCAGAGAATATTAAGTCAACACCTGGGGTTGCCAACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp GCTTCTTGCTGGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATaGTTGGCAACCCCAGGTGTTGACTTAATATTCTCTGGCTCTAAG +
Preference number: 6 (lower is better)
Translates to: ASCWNWTSGFFQGEP*LATPGVDLIFSGSK
Trigger: CTTAGAGCCAGAGAATATTAAGTCAACACCTGGGGTTGCCAACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp GTATTTCTCTCTCTGCACTTGGTTCTTGGGAACCTCACCAGCTTCTaGCTGGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATTGTT +
Preference number: 6 (lower is better)
Translates to: VFLSLHLVLGNLTSF*LELDLRLLPRRAIV
Trigger: AACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS GCA 72 bp TGTGGAAGCTCATCCTTCACTGCAGAGAATCTCACATaGTTTAATGGCTCCAGGGAGTTTGGGGAAGAGTTG +
Preference number: 6 (lower is better)
Translates to: CGSSSFTAENLT*FNGSREFGEEL
Trigger: CAACTCTTCCCCAAACTCCCTGGAGCCATTAAAGCATGTGAGATTCTCTGCAGTGAAGGATGAGCTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS GCA 72 bp GTGTGCATCATCATTCACATATGCCTCTGGGAGGCTTaGTTGGGAAGTCAACTGAAGAGATGTAACTGGGGA +
Preference number: 6 (lower is better)
Translates to: VCIIIHICLWEA*LGSQLKRCNWG
Trigger: TCCCCAGTTACATCTCTTCAGTTGACTTCCCAAGCAAGCCTCCCAGAGGCATATGTGAATGATGATGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS GCA 72 bp GGAGCATGTCGTTCACTCCCGACATTTGAGGGAGGTTaGAGTGCTGGTAAAGTAATGTTTCTTCTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GACRSLPTFEGG*SAGKVMFLLEG
Trigger: GCCTTCTAGAAGAAACATTACTTTACCAGCACTGCAACCTCCCTCAAATGTCGGGAGTGAACGACATGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp GTCAAGTCATGTGCCAAAGTTCAGCACCTTCACTGCTaGCAGGAGGACCTCATAAGCAAAGTTTCAGGTTTC +
Preference number: 6 (lower is better)
Translates to: VKSCAKVQHLHC*QEDLISKVSGF
Trigger: GAAACCTGAAACTTTGCTTATGAGGTCCTCCTGCCAGCAGTGAAGGTGCTGAACTTTGGCACATGACTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532221.5
CDS CAA 72 bp AATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATTGTaGGCAACCCCAGGTGTTGACTTAATATTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: NWTSGFFQGEPL*ATPGVDLIFSG
Trigger: GCCAGAGAATATTAAGTCAACACCTGGGGTTGCCAACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp ATTCTGTCACTCACTCTTTTGTATTTCTCTCTCTGCACTTGGTTCTaGGGAACCTCACCAGCTTCTTGCTGGAATTGGACCTCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: ILSLTLLYFSLCTWF*GTSPASCWNWTSGF
Trigger: GAAGCCTGAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATACAAAAGAGTGAGTGACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CTACTTTTGCTTGATTTTCTCTTTAGATTAGCTCCTTaGGCCAGTGCCATAGCGGGAGCTCCCATTTCAGCC +
Preference number: 6 (lower is better)
Translates to: LLLLDFLFRLAP*ASAIAGAPISA
Trigger: GGCTGAAATGGGAGCTCCCGCTATGGCACTGGCTCAAGGAGCTAATCTAAAGAGAAAATCAAGCAAAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529581.5
ENST00000533892.5
CDS CCA 72 bp GTTTCCTTGTGTTTTCCTGGGACATATCAATCACACTaGAAGCTGGATTTACCACACTGGAACTCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: VSLCFPGTYQSH*KLDLPHWNSGL
Trigger: CAAGCCCGAGTTCCAGTGTGGTAAATCCAGCTTCCAGTGTGATTGATATGTCCCAGGAAAACACAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp TTAATTCCTCAGGATGGCATTCAGAAGTGGCTCGCCTaGGCTCCTCTGTACTACCTATTAACTTTGATGGAG +
Preference number: 6 (lower is better)
Translates to: LIPQDGIQKWLA*APLYYLLTLME
Trigger: CTCCATCAAAGTTAATAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATCCTGAGGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp GTCCCTGTGCCTTTTTGCCTTGGCTTCATAAAACCATaGGCCACTCATATTCTTCAGCTGCTGGTCATCCTT +
Preference number: 6 (lower is better)
Translates to: VPVPFCLGFIKP*ATHILQLLVIL
Trigger: AAGGATGACCAGCAGCTGAAGAATATGAGTGGCCAATGGTTTTATGAAGCCAAGGCAAAAAGGCACAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 72 bp GGAGAGGGTGAAGTTCCAGTTGCTTCCTTCAGGAGTTaGTCTAGACTAGCAGTCAAAGAGTTCCGTTTAACC +
Preference number: 6 (lower is better)
Translates to: GEGEVPVASFRS*SRLAVKEFRLT
Trigger: GGTTAAACGGAACTCTTTGACTGCTAGTCTAGACAAACTCCTGAAGGAAGCAACTGGAACTTCACCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp TGGAATTGGACCTCAGGCTTCTTCCAAGGAGAGCCATaGTTGGCAACCCCAGGTGTTGACTTAATATTCTCT +
Preference number: 6 (lower is better)
Translates to: WNWTSGFFQGEP*LATPGVDLIFS
Trigger: AGAGAATATTAAGTCAACACCTGGGGTTGCCAACAATGGCTCTCCTTGGAAGAAGCCTGAGGTCCAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp CCAGCTTTCTCTCCTTCCCAAAAGGATATTCTGTCACTCACTCTTTaGTATTTCTCTCTCTGCACTTGGTTCTTGGGAACCTCACCAGCT +
Preference number: 6 (lower is better)
Translates to: PAFSPSQKDILSLTL*YFSLCTWFLGTSPA
Trigger: AGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATACAAAAGAGTGAGTGACAGAATATCCTTTTGGGAAGGAGAGAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp GATTCTAAAACACTAAATTCTCCTACTTCCCGACCATaGATTAGCCCAGGACTCTGTGGAAGCTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: DSKTLNSPTSRP*ISPGLCGSSSF
Trigger: GAAGGATGAGCTTCCACAGAGTCCTGGGCTAATCCATGGTCGGGAAGTAGGAGAATTTAGTGTTTTAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp CTGTTTCTTTTAATTCCTCAGGATGGCATTCAGAAGTaGCTCGCCTGGGCTCCTCTGTACTACCTATTAACT +
Preference number: 6 (lower is better)
Translates to: LFLLIPQDGIQK*LAWAPLYYLLT
Trigger: AGTTAATAGGTAGTACAGAGGAGCCCAGGCGAGCCACTTCTGAATGCCATCCTGAGGAATTAAAAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp AAGAATGACTTTCTCTACAGTCTCCGAAATTTCCGTTaGAGAAGGGTGTACCCTAGCCTGGGGAACAAGATG +
Preference number: 6 (lower is better)
Translates to: KNDFLYSLRNFR*RRVYPSLGNKM
Trigger: CATCTTGTTCCCCAGGCTAGGGTACACCCTTCTCAAACGGAAATTTCGGAGACTGTAGAGAAAGTCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp AAAGGATATTCTGTCACTCACTCTTTTGTATTTCTCTCTCTGCACTaGGTTCTTGGGAACCTCACCAGCTTCTTGCTGGAATTGGACCTC +
Preference number: 6 (lower is better)
Translates to: KGYSVTHSFVFLSLH*VLGNLTSFLLELDL
Trigger: GAGGTCCAATTCCAGCAAGAAGCTGGTGAGGTTCCCAAGAACCAAGTGCAGAGAGAGAAATACAAAAGAGTGAGTGACAGAATATCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS GCA 72 bp CCCAAACCCATGGTCATTAACAAATATTTGTGTGTGTaGATCATCATTCACATATGCCTCTGGGAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: PKPMVINKYLCV*IIIHICLWEAC
Trigger: GCAAGCCTCCCAGAGGCATATGTGAATGATGATGCACACACACAAATATTTGTTAATGACCATGGGTTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526999.5
CDS GCA 72 bp GGCTATAGTCCATATTTTTACTCCCTTGACTTGGGGTaGCATAGCTTTCAAATGGTTGCAATATACCTGGGC +
Preference number: 6 (lower is better)
Translates to: GYSPYFYSLDLG*HSFQMVAIYLG
Trigger: GCCCAGGTATATTGCAACCATTTGAAAGCTATGGCACCCCAAGTCAAGGGAGTAAAAATATGGACTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp TTCTTTCTCATAGATGCTCTGATGATATCTGCGCCATaGATTTTGTCCCTGTGCCTTTTTGCCTTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: FFLIDALMISAP*ILSLCLFALAS
Trigger: TGAAGCCAAGGCAAAAAGGCACAGGGACAAAATCCATGGCGCAGATATCATCAGAGCATCTATGAGAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp TCAGACAGAGAGCACATACTCACAAGAGCTGAAGCCTaGACTCTCTTCTTTCCTAGGCAGTTCTTAAGAATT +
Preference number: 6 (lower is better)
Translates to: SDREHILTRAEA*TLFFPRQFLRI
Trigger: AATTCTTAAGAACTGCCTAGGAAAGAAGAGAGTCCAGGCTTCAGCTCTTGTGAGTATGTGCTCTCTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528566.1
CDS CCA 72 bp TGTGTAGGCACTGTGGAAATCACAAGAGCTGAAGCCTaGACTCTCTTCTTTCCTAGGCAGTTCTTAAGAATT +
Preference number: 6 (lower is better)
Translates to: CVGTVEITRAEA*TLFFPRQFLRI
Trigger: AATTCTTAAGAACTGCCTAGGAAAGAAGAGAGTCCAGGCTTCAGCTCTTGTGATTTCCACAGTGCCTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534554.1
CDS CAA 72 bp CATGAACTTTTCCACCAGAGGGTTGAATTGCTGGTGTaGAGGTTTCTGAAAGCAGTTTCTGCAAGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: HELFHQRVELLV*RFLKAVSASCH
Trigger: ATGACAGCTTGCAGAAACTGCTTTCAGAAACCTCAACACCAGCAATTCAACCCTCTGGTGGAAAAGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp TTCAGAAACCAGCATATCTCCCTCTGCTTGGAATGGTaGGTCAGATCTCACAGGCTTCAATTCAATTTTGCT +
Preference number: 6 (lower is better)
Translates to: FRNQHISLCLEW*VRSHRLQFNFA
Trigger: AGCAAAATTGAATTGAAGCCTGTGAGATCTGACTCACCATTCCAAGCAGAGGGAGATATGCTGGTTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp TCATCCTCATCTAAGACCACTCGTTTGGGAATGGCCTaGTTATATTCACTCTGGTCTGTAGATAAACTGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSKTTRLGMA*LYSLWSVDKLS
Trigger: GGACAGTTTATCTACAGACCAGAGTGAATATAATCAGGCCATTCCCAAACGAGTGGTCTTAGATGAGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CATCTTCTTGGTACGCATTCATTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCTTCAGCACTACGCACT +
Preference number: 6 (lower is better)
Translates to: HLLGTHSFVTGF*SGFSSSSALRT
Trigger: AGTGCGTAGTGCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTTACAAATGAATGCGTACCAAGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533057.6
CDS CCA 72 bp AGCTCTTGTCTTCTGGCGACTTTTCCTACTTGTATCTaGAAGGATGGTACTACAAAAAGAGGCATGATTGTG +
Preference number: 6 (lower is better)
Translates to: SSCLLATFPTCI*KDGTTKRGMIV
Trigger: CACAATCATGCCTCTTTTTGTAGTACCATCCTTCCAGATACAAGTAGGAAAAGTCGCCAGAAGACAAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525692.1
CDS CAA 72 bp ACATGCTTTAATGGCTCCAGGGAGTTTGGGGAAGAGTaGTCTTCTAAAGAATGCTCCTTCTCAGAAATTCTC +
Preference number: 6 (lower is better)
Translates to: TCFNGSREFGEE*SSKECSFSEIL
Trigger: GAGAATTTCTGAGAAGGAGCATTCTTTAGAAGACAACTCTTCCCCAAACTCCCTGGAGCCATTAAAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 90 bp TCTGCTTGGAATGGTGAGTCAGATCTCACAGGCTTCAATTCAATTTaGCTGGGTGATAGGGTCTTTGAGCCATTTTCTCTTAAAGTAGTG +
Preference number: 6 (lower is better)
Translates to: SAWNGESDLTGFNSI*LGDRVFEPFSLKVV
Trigger: CACTACTTTAAGAGAAAATGGCTCAAAGACCCTATCACCCAGCAAAATTGAATTGAAGCCTGTGAGATCTGACTCACCATTCCAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CACTTACATCATTCAATACAGGTCTGGGTGGAAGAATaGCTTTCTCTACAGTCTCCGAAATTTCCGTTTGAG +
Preference number: 6 (lower is better)
Translates to: HLHHSIQVWVEE*LSLQSPKFPFE
Trigger: CTCAAACGGAAATTTCGGAGACTGTAGAGAAAGTCATTCTTCCACCCAGACCTGTATTGAATGATGTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp GAAATTCTTGGTACGCATTCATTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCTTCAGCACTACGCACT +
Preference number: 6 (lower is better)
Translates to: EILGTHSFVTGF*SGFSSSSALRT
Trigger: AGTGCGTAGTGCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTTACAAATGAATGCGTACCAAGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354566.7
ENST00000389960.8
ENST00000524452.5
ENST00000527523.5
ENST00000527794.5
ENST00000529581.5
ENST00000530351.5
ENST00000532995.5
ENST00000533892.5
CDS TCA 72 bp TTCATTCTTGGTACGCATTCATTTGTAACTGGCTTCTaGTCTGGTTTCTCATCTGATCCACTGACAAGCTTC +
Preference number: 6 (lower is better)
Translates to: FILGTHSFVTGF*SGFSSDPLTSF
Trigger: GAAGCTTGTCAGTGGATCAGATGAGAAACCAGATCAGAAGCCAGTTACAAATGAATGCGTACCAAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524911.5
CDS TCA 72 bp AGATTCCTTGAGAACACTGTAGGAATAGTTACTATTTaGAGGAGATGCCCCATTCCCTTTTCCTGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: RFLENTVGIVTI*RRCPIPFSWAF
Trigger: AAAAGCCCAGGAAAAGGGAATGGGGCATCTCCTTCAAATAGTAACTATTCCTACAGTGTTCTCAAGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CATATTCTTGGTACGCATTCATTTGTAACTGGCTTCTaGTCTGGTTTCTCATCATCTTCAGCACTACGCACT +
Preference number: 6 (lower is better)
Translates to: HILGTHSFVTGF*SGFSSSSALRT
Trigger: AGTGCGTAGTGCTGAAGATGATGAGAAACCAGATCAGAAGCCAGTTACAAATGAATGCGTACCAAGAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533577.1
CDS CCA 72 bp CTAAAGAATGCTCCTTCTCAGAAATTCTCTCATGGATaGTTAGGCCAGGTGACACAATTTTGCTTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: LKNAPSQKFSHG*LGQVTQFCFWV
Trigger: AACCCAAAAGCAAAATTGTGTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CCA 72 bp GTGAGTCAGATCTCACAGGCTTCAATTCAATTTTGCTaGGTGATAGGGTCTTTGAGCCATTTTCTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: VSQISQASIQFC*VIGSLSHFLLK
Trigger: CTTTAAGAGAAAATGGCTCAAAGACCCTATCACCCAGCAAAATTGAATTGAAGCCTGTGAGATCTGACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp AATGGTGAGTCAGATCTCACAGGCTTCAATTCAATTTaGCTGGGTGATAGGGTCTTTGAGCCATTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: NGESDLTGFNSI*LGDRVFEPFSL
Trigger: AAGAGAAAATGGCTCAAAGACCCTATCACCCAGCAAAATTGAATTGAAGCCTGTGAGATCTGACTCACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp AGTCACAAGTGCGTCTCCTCCCAACATTTTATCACATTGGTTGACTaGAGATTCCAAACCATTACTTTTATCCTTCATTTCAGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SHKCVSSQHFITLVD*RFQTITFILHFRGL
Trigger: CAGACCTCTGAAATGAAGGATAAAAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGATAAAATGTTGGGAGGAGACGCACTTGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CAA 90 bp CCTGGGCCTTCCTTTGGGGTGCCTTTTTGGGACAAATTCATGAATTaGGATTTGATATTCACATTATTATCTTGGCAACTTTCAGAAACC +
Preference number: 6 (lower is better)
Translates to: PGPSFGVPFWDKFMN*DLIFTLLSWQLSET
Trigger: GGTTTCTGAAAGTTGCCAAGATAATAATGTGAATATCAAATCCAAATTCATGAATTTGTCCCAAAAAGGCACCCCAAAGGAAGGCCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CAGTTTCTTCCTTCAGTAGTTTTTCTAAGCCAGCACTaGATTCGAGGAACTCTGATTTGGGTTGAACAATTG +
Preference number: 6 (lower is better)
Translates to: QFLPSVVFLSQH*IRGTLIWVEQL
Trigger: CAATTGTTCAACCCAAATCAGAGTTCCTCGAATTCAGTGCTGGCTTAGAAAAACTACTGAAGGAAGAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS CCA 72 bp TCTTCTAAAGAATGCTCCTTCTCAGAAATTCTCTCATaGATGGTTAGGCCAGGTGACACAATTTTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: SSKECSFSEILS*MVRPGDTILLL
Trigger: CAAAAGCAAAATTGTGTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 72 bp GGTTCTTCTTCACCCAAGTTGCCAATATTATTAGTGTaGCATGGAACTTGGTTTTCTGCATCAGATTCCTTG +
Preference number: 6 (lower is better)
Translates to: GSSSPKLPILLV*HGTWFSASDSL
Trigger: CAAGGAATCTGATGCAGAAAACCAAGTTCCATGCAACACTAATAATATTGGCAACTTGGGTGAAGAAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp AGCCCATTAATTGGAAAAGAACCAGAAGTCATTGGCTaGTGTGTTTCACTTTTTGATACATATGGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: SPLIGKEPEVIG*CVSLFDTYGLE
Trigger: CTCAAGCCCATATGTATCAAAAAGTGAAACACATCAGCCAATGACTTCTGGTTCTTTTCCAATTAATGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS TCA 72 bp TCCATAGACTGTGGTCTTGCAGTTAAAACTTCTGAATaGGAATGCAGCCCATTAATTGGAAAAGAACCAGAA +
Preference number: 6 (lower is better)
Translates to: SIDCGLAVKTSE*ECSPLIGKEPE
Trigger: TTCTGGTTCTTTTCCAATTAATGGGCTGCATTCTCATTCAGAAGTTTTAACTGCAAGACCACAGTCTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS TCA 72 bp TGTTGCATGGAACTTGGTTTTCTGCATCAGATTCCTTaGGAACACTGTAGGAATAGTTACTATTTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: CCMELGFLHQIP*EHCRNSYYLKE
Trigger: CTCCTTCAAATAGTAACTATTCCTACAGTGTTCTCAAGGAATCTGATGCAGAAAACCAAGTTCCATGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp CATAAGCAAAGTTTCAGGTTTCCCACTACATGTCACTaGCTTTTAGCCATCAGCACATTGGTTTTCTATCTA +
Preference number: 6 (lower is better)
Translates to: HKQSFRFPTTCH*LLAISTLVFYL
Trigger: TAGATAGAAAACCAATGTGCTGATGGCTAAAAGTCAGTGACATGTAGTGGGAAACCTGAAACTTTGCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532221.5
CDS CCA 72 bp ACAACAGAGCTTCAGACCACAAAGTCTGTACTTTATTaGTTCATCTCCTTGAGATATATCACTAACACACTG +
Preference number: 6 (lower is better)
Translates to: TTELQTTKSVLY*FISLRYITNTL
Trigger: CAGTGTGTTAGTGATATATCTCAAGGAGATGAACCAATAAAGTACAGACTTTGTGGTCTGAAGCTCTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS CAA 72 bp GAAATATCTTGTTCAGTTCTGCATCAAAGTCTTATTTaGGCTCAGCAAAAGTTTAGGGCAGCTGATAGCAAG +
Preference number: 6 (lower is better)
Translates to: EISCSVLHQSLI*AQQKFRAADSK
Trigger: CTTGCTATCAGCTGCCCTAAACTTTTGCTGAGCCAAAATAAGACTTTGATGCAGAACTGAACAAGATATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
ENST00000528231.5
CDS CAA 72 bp TTGGCTGATGTGTTTCACTTTTTGATACATATGGGCTaGAGGTTGATTGATGAAAAAGCGAAGGCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: LADVFHFLIHMG*RLIDEKAKAFC
Trigger: ACAGAAAGCCTTCGCTTTTTCATCAATCAACCTCAAGCCCATATGTATCAAAAAGTGAAACACATCAGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 72 bp AGTCACAAGTGCGTCTCCTCCCAACATTTTATCACATaGGTTGACTTGAGATTCCAAACCATTACTTTTATC +
Preference number: 6 (lower is better)
Translates to: SHKCVSSQHFIT*VDLRFQTITFI
Trigger: GATAAAAGTAATGGTTTGGAATCTCAAGTCAACCAATGTGATAAAATGTTGGGAGGAGACGCACTTGTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CAA 72 bp AATCTTGGCTATAGTCCATATTTTTACTCCCTTGACTaGGGGTGCCATAGCTTTCAAATGGTTGCAATATAC +
Preference number: 6 (lower is better)
Translates to: NLGYSPYFYSLD*GCHSFQMVAIY
Trigger: GTATATTGCAACCATTTGAAAGCTATGGCACCCCAAGTCAAGGGAGTAAAAATATGGACTATAGCCAAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp ACCCAAGTTGCCAATATTATTAGTGTTGCATGGAACTaGGTTTTCTGCATCAGATTCCTTGAGAACACTGTA +
Preference number: 6 (lower is better)
Translates to: TQVANIISVAWN*VFCIRFLENTV
Trigger: TACAGTGTTCTCAAGGAATCTGATGCAGAAAACCAAGTTCCATGCAACACTAATAATATTGGCAACTTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 90 bp CTGGGTAATACAGATTCAAGCCTTGTTAATTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGTGAATTCTCCATAGACTGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LGNTDSSLVNSDDLS*GSLMVGEFSIDCGL
Trigger: AAGACCACAGTCTATGGAGAATTCACCAACCATCAATGAACCCAAAGATAAATCATCAGAATTAACAAGGCTTGAATCTGTATTACCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 90 bp GATGCTAGAGTCAATTCAACTTTACTTGTTTTTGTAGAGTTTTCTTaGTTCATCAGGAGAGGAATGGGTTGCCTATTTCTGGACACACTA +
Preference number: 6 (lower is better)
Translates to: DARVNSTLLVFVEFS*FIRRGMGCLFLDTL
Trigger: TAGTGTGTCCAGAAATAGGCAACCCATTCCTCTCCTGATGAACAAAGAAAACTCTACAAAAACAAGTAAAGTTGAATTGACTCTAGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000530351.5
ENST00000634661.1
CDS CAA 90 bp TTCTTCTTCACCCAAGTTGCCAATATTATTAGTGTTGCATGGAACTaGGTTTTCTGCATCAGATTCCTTGAGAACACTGTAGGAATAGTT +
Preference number: 6 (lower is better)
Translates to: FFFTQVANIISVAWN*VFCIRFLENTVGIV
Trigger: AACTATTCCTACAGTGTTCTCAAGGAATCTGATGCAGAAAACCAAGTTCCATGCAACACTAATAATATTGGCAACTTGGGTGAAGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp ATAATAGCAACAAATGTGGCTCAAAATTCTCAGGGCTaGACAACTAAGACTGCAACCAGGAAGATTAAAACA +
Preference number: 6 (lower is better)
Translates to: IIATNVAQNSQG*TTKTATRKIKT
Trigger: TGTTTTAATCTTCCTGGTTGCAGTCTTAGTTGTTCAGCCCTGAGAATTTTGAGCCACATTTGTTGCTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000528231.5
CDS TCA 72 bp AGACTAGCAGTCAAAGAGTTCCGTTTAACCTTTGGATaGACTACTGTTTTGTCAACATGCTCATTAATGATC +
Preference number: 6 (lower is better)
Translates to: RLAVKEFRLTFG*TTVLSTCSLMI
Trigger: GATCATTAATGAGCATGTTGACAAAACAGTAGTTCATCCAAAGGTTAAACGGAACTCTTTGACTGCTAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354566.7
ENST00000389959.8
ENST00000525423.5
ENST00000634661.1
CDS TCA 72 bp AGATTTTACCAGTTGTGCCCAGAGAGATCTAAATGCTaGGACTTGAGAATCAAACAGAAGAATAACTTAACC +
Preference number: 6 (lower is better)
Translates to: RFYQLCPERSKC*DLRIKQKNNLT
Trigger: GGTTAAGTTATTCTTCTGTTTGATTCTCAAGTCTCAGCATTTAGATCTCTCTGGGCACAACTGGTAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524911.5
CDS TCA 72 bp CTTGTATCTGGAAGGATGGTACTACAAAAAGAGGCATaGTTGTGGGAGCATTTTAGTAAGATAGTGAACATT +
Preference number: 6 (lower is better)
Translates to: LVSGRMVLQKEA*LWEHFSKIVNI
Trigger: AATGTTCACTATCTTACTAAAATGCTCCCACAATCATGCCTCTTTTTGTAGTACCATCCTTCCAGATACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525692.1
CDS GCA 72 bp GCCAATATTATTAGTGTTGCATGGAACTTGGTTTTCTaGATCAGATTCCTTGAGAACACTGTAGGAATAGTT +
Preference number: 6 (lower is better)
Translates to: ANIISVAWNLVF*IRFLENTVGIV
Trigger: AACTATTCCTACAGTGTTCTCAAGGAATCTGATGCAGAAAACCAAGTTCCATGCAACACTAATAATATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp AGCCTTGTTAATTCTGATGATTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCCATAGACTGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: SLVNSDDLSLGS*MVGEFSIDCGL
Trigger: AAGACCACAGTCTATGGAGAATTCACCAACCATCAATGAACCCAAAGATAAATCATCAGAATTAACAAGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 90 bp CACAAAAATGAAATATCTTGTTCAGTTCTGCATCAAAGTCTTATTTaGGCTCAGCAAAAGTTTAGGGCAGCTGATAGCAAGATCCTAAGT +
Preference number: 6 (lower is better)
Translates to: HKNEISCSVLHQSLI*AQQKFRAADSKILS
Trigger: ACTTAGGATCTTGCTATCAGCTGCCCTAAACTTTTGCTGAGCCAAAATAAGACTTTGATGCAGAACTGAACAAGATATTTCATTTTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000524830.1
ENST00000528231.5
CDS CAA 90 bp ACAGATTCAAGCCTTGTTAATTCTGATGATTTATCTTTGGGTTCATaGATGGTTGGTGAATTCTCCATAGACTGTGGTCTTGCAGTTAAA +
Preference number: 6 (lower is better)
Translates to: TDSSLVNSDDLSLGS*MVGEFSIDCGLAVK
Trigger: TTTAACTGCAAGACCACAGTCTATGGAGAATTCACCAACCATCAATGAACCCAAAGATAAATCATCAGAATTAACAAGGCTTGAATCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 90 bp CCTTCCTTTGGGGTGCCTTTTTGGGACAAATTCATGAATTTGGATTaGATATTCACATTATTATCTTGGCAACTTTCAGAAACCAGCATA +
Preference number: 6 (lower is better)
Translates to: PSFGVPFWDKFMNLD*IFTLLSWQLSETSI
Trigger: TATGCTGGTTTCTGAAAGTTGCCAAGATAATAATGTGAATATCAAATCCAAATTCATGAATTTGTCCCAAAAAGGCACCCCAAAGGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525423.5
ENST00000634661.1
CDS CAA 72 bp ACAGATTCAAGCCTTGTTAATTCTGATGATTTATCTTaGGGTTCATTGATGGTTGGTGAATTCTCCATAGAC +
Preference number: 6 (lower is better)
Translates to: TDSSLVNSDDLS*GSLMVGEFSID
Trigger: GTCTATGGAGAATTCACCAACCATCAATGAACCCAAAGATAAATCATCAGAATTAACAAGGCTTGAATCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316356.8
ENST00000359152.9
ENST00000389960.8
ENST00000438197.2
ENST00000524452.5
ENST00000527523.5
ENST00000528231.5
ENST00000634661.1
CDS CAA 72 bp AAAACTGTTCTGGTTGTTGAGTGTCTTAGAGTAGGTTaGTTTAGTGAGCATGAGGATTACTTTTCTGATAGT +
Preference number: 6 (lower is better)
Translates to: KTVLVVECLRVG*FSEHEDYFSDS
Trigger: ACTATCAGAAAAGTAATCCTCATGCTCACTAAACAAACCTACTCTAAGACACTCAACAACCAGAACAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525702.5
CDS CCA 72 bp TCACTAACACACTGCAGGCTGAAAAACTATTTCATCTaGACAGTCAAGATTTTTGTACACAACTCAATAATA +
Preference number: 6 (lower is better)
Translates to: SLTHCRLKNYFI*TVKIFVHNSII
Trigger: TATTATTGAGTTGTGTACAAAAATCTTGACTGTCCAGATGAAATAGTTTTTCAGCCTGCAGTGTGTTAGTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525702.5