RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000170743

Ensembl transcript IDs: ENST00000318881.11, ENST00000524820.6, ENST00000532592.1

Found 654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCAGGTTGGAAGAGGGCAGAGCTGCTTCCAGGACACCAGAGAGTaGAGCAAGTATGCAGAGAAAACCTGGGCACCAAGAGACCTCCAC +
Preference number: 1 (lower is better)
Translates to: SQVGRGQSCFQDTRE*SKYAEKTWAPRDLH
Trigger: GTGGAGGTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTCCTGGAAGCAGCTCTGCCCTCTTCCAACCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR GCA 90 bp TGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTaGTCTCTCCTTGCAGCTGGAAACCCTTCTTCCTCCCCTGCACCA +
Preference number: 1 (lower is better)
Translates to: WQHCSTSWCLTVTAR*SLLAAGNPSSSPAP
Trigger: TGGTGCAGGGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CCA 90 bp TGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: CFPAAHHLGPPAEGG*TIQVHQTQSGKKAS
Trigger: ACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp GACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGC +
Preference number: 1 (lower is better)
Translates to: DMLPCSTSPWATCRR*LDHSGSPNPIWKEG
Trigger: GCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp GTTCATAGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTaGAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCAT +
Preference number: 1 (lower is better)
Translates to: VHSPILVLGMRDMLP*STSPWATCRRWLDH
Trigger: ATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACTATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp TATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTaGACGCTGCTCTCTCCTTGCAGCTGGAAACCCTTCTTCCTCCCC +
Preference number: 1 (lower is better)
Translates to: YVLAALFYILVPHCH*TLLSPCSWKPFFLP
Trigger: GGGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR GCA 90 bp GCTGTACTGGCTAGGCAAAGCTTTCCAGACACAAAGCCACCTGCCTaGCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCA +
Preference number: 1 (lower is better)
Translates to: AVLARQSFPDTKPPA*HVDSTLCLLAPTKP
Trigger: TGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTGGCTTTGTGTCTGGAAAGCTTTGCCTAGCCAGTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp TCCCAAACCTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTaGTGCCTCACTGTCACTGCACGCTGCTCTCTCCTTGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: SQTSGNMFWQHCSTS*CLTVTARCSLLAAG
Trigger: TCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR GCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTaGATATGGAAATACCCCAGAAGGCATTCAGGCCAGAGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: GNLYVWLPKAMTLGC*IWKYPRRHSGQRSP
Trigger: TGGGCTTCTCTGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp CAAACCTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTaGCTCACTGTCACTGCACGCTGCTCTCTCCTTGCAGCTGGAAAC +
Preference number: 1 (lower is better)
Translates to: QTSGNMFWQHCSTSW*LTVTARCSLLAAGN
Trigger: GTTTCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR TCA 90 bp GCCATTGGTTGGCAGACTTGGTCAGGAAGGAAGCTGAGTAATGAATaGGATGCCTGGGGAGGGCCCTTGACCTTCACTCTTGTAGGTATT +
Preference number: 1 (lower is better)
Translates to: AIGWQTWSGRKLSNE*DAWGGPLTFTLVGI
Trigger: AATACCTACAAGAGTGAAGGTCAAGGGCCCTCCCCAGGCATCTCATTCATTACTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp GCCCTTCATGTTTTGCTTCTAAACACTGGTATGGTGGAGGATGTCTaGATGAGGAGGGATGAGCAGAGGGGAACCTTGAGCAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: ALHVLLLNTGMVEDV*MRRDEQRGTLSRGS
Trigger: GCTTCCTCTGCTCAAGGTTCCCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCACCATACCAGTGTTTAGAAGCAAAACATGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATaGAAATACCCCAGAAGGCATTCAGGCCAGAGAAGCCCAAAAGCT +
Preference number: 1 (lower is better)
Translates to: LYVWLPKAMTLGCCI*KYPRRHSGQRSPKA
Trigger: AGCTTTTGGGCTTCTCTGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CTGAGGGAGTTCAAATTTATAACCAGCCTCTGCTCACAGCTGTACTaGCTAGGCAAAGCTTTCCAGACACAAAGCCACCTGCCTGCCATG +
Preference number: 1 (lower is better)
Translates to: LREFKFITSLCSQLY*LGKAFQTQSHLPAM
Trigger: CATGGCAGGCAGGTGGCTTTGTGTCTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAATTTGAACTCCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CATTCAGGCCAGAGAAGCCCAAAAGCTGTGCCTTTCTATAGGGGATaGCTGTGTTCTCTCTCCATGATCTCATCTCACCCATTGCTGTAC +
Preference number: 1 (lower is better)
Translates to: HSGQRSPKAVPFYRG*LCSLSMISSHPLLY
Trigger: GTACAGCAATGGGTGAGATGAGATCATGGAGAGAGAACACAGCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTCTCTGGCCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp ACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTaGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGC +
Preference number: 1 (lower is better)
Translates to: TALEEVHSQTSGNMF*QHCSTSWCLTVTAR
Trigger: GCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR TCA 90 bp GCTTCTAAACACTGGTATGGTGGAGGATGTCTGAATGAGGAGGGATaGGCAGAGGGGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTAT +
Preference number: 1 (lower is better)
Translates to: ASKHWYGGGCLNEEG*AEGNLEQRKPSFPY
Trigger: ATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCCCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCACCATACCAGTGTTTAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp TTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTaGCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCG +
Preference number: 1 (lower is better)
Translates to: LEPVCFLWDHSSGLI*LALQTIFLLTILVA
Trigger: CGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp CCAGGCTTCCATTGCCAAGGACATGTCAGAATTTATTGGGATTGCTaGCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTC +
Preference number: 1 (lower is better)
Translates to: PGFHCQGHVRIYWDC*LISIGASLLSLGPF
Trigger: GAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCAATGGAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp AGAGTTGCAAATGGGCTGAGGGAGTTCAAATTTATAACCAGCCTCTaGTCACAGCTGTACTGGCTAGGCAAAGCTTTCCAGACACAAAGC +
Preference number: 1 (lower is better)
Translates to: RVANGLREFKFITSL*SQLYWLGKAFQTQS
Trigger: GCTTTGTGTCTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAATTTGAACTCCCTCAGCCCATTTGCAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp TCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGCTGTaGTTACAGCTGAGCATTTGGTCACTGAAATCGTCTGGATGTTGC +
Preference number: 1 (lower is better)
Translates to: SGSPNPIWKEGQLVL*LQLSIWSLKSSGCC
Trigger: GCAACATCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAACCACAGCACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp AGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATaGGCTGAGGGAGTTCAAATTTATAACCAGCCTCTGCTCACAGCT +
Preference number: 1 (lower is better)
Translates to: RATKQNAREQRQSCK*AEGVQIYNQPLLTA
Trigger: AGCTGTGAGCAGAGGCTGGTTATAAATTTGAACTCCCTCAGCCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp ATCTATCATTTGTTTTTGTTCATAGTCCGATCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCA +
Preference number: 1 (lower is better)
Translates to: IYHLFLFIVRSWFLA*ETCFPAAHHLGPPA
Trigger: TGCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACTATGAACAAAAACAAATGATAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTaGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCT +
Preference number: 1 (lower is better)
Translates to: PRTCQNLLGLLPDIY*SQSAFSGTILLGSS
Trigger: AGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 90 bp AGAAAAATACTATCTTGGAGTAGTGGTGCAAATGTGTGGATGGGGTaGCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGC +
Preference number: 1 (lower is better)
Translates to: RKILSWSSGANVWMG*LAPIMGQRGPLGNS
Trigger: GCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCACCCCATCCACACATTTGCACCACTACTCCAAGATAGTATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp GATTTCCAGGGCAGATGCTATGTCCTCATCACCAAGGGCTTCATATaGAACATTGAGTCCTGGTACTCTTGGTACTGTCACTATATCTAT +
Preference number: 1 (lower is better)
Translates to: DFQGRCYVLITKGFI*NIESWYSWYCHYIY
Trigger: ATAGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATCTGCCCTGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp ATCAGACATAGGCAGAACCTTGGATTCTCTTTGAATCCCAGTGGTTaGAAGCCAATCAGAGAAGTGAAGCTTGAATGTAATGACACTGCT +
Preference number: 1 (lower is better)
Translates to: IRHRQNLGFSLNPSG*KPIREVKLECNDTA
Trigger: AGCAGTGTCATTACATTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTTCTGCCTATGTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTaGGCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTAT +
Preference number: 1 (lower is better)
Translates to: LISIGASLLSLGPFF*AHLPSFTDNISANY
Trigger: ATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp GGGCAGATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTaGGTCCTGGTACTCTTGGTACTGTCACTATATCTATCATTTGTT +
Preference number: 1 (lower is better)
Translates to: GQMLCPHHQGLHMKH*VLVLLVLSLYLSFV
Trigger: AACAAATGATAGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp CTGAAGACGTATAACGATCCTTCCTCCGCCCAGTTAGTTCCATGCTaGAATGTTAATTCAAACAGAGATAATGAGCTTTCCAGGAAGGTA +
Preference number: 1 (lower is better)
Translates to: LKTYNDPSSAQLVPC*NVNSNRDNELSRKV
Trigger: TACCTTCCTGGAAAGCTCATTATCTCTGTTTGAATTAACATTTCAGCATGGAACTAACTGGGCGGAGGAAGGATCGTTATACGTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 90 bp CTGGATGTTGCTGGATGGAAAAAGTTACTTAAGATCTTTGTGAGATaGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCTTACCCAT +
Preference number: 1 (lower is better)
Translates to: LDVAGWKKLLKIFVR*LSYFVLGTSSPLTH
Trigger: ATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAGTAACTTTTTCCATCCAGCAACATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp ATCGTCTGGATGTTGCTGGATGGAAAAAGTTACTTAAGATCTTTGTaGGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCTTA +
Preference number: 1 (lower is better)
Translates to: IVWMLLDGKSYLRSL*DGCPILSLAQAVLL
Trigger: TAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAGTAACTTTTTCCATCCAGCAACATCCAGACGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 90 bp GGTAAACTACAATCCAACTCTGGATTCTGCTGTAAAGAGATTGTGTaGAAAGAAAAATACTATCTTGGAGTAGTGGTGCAAATGTGTGGA +
Preference number: 1 (lower is better)
Translates to: GKLQSNSGFCCKEIV*KEKYYLGVVVQMCG
Trigger: TCCACACATTTGCACCACTACTCCAAGATAGTATTTTTCTTTTCACACAATCTCTTTACAGCAGAATCCAGAGTTGGATTGTAGTTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCCAGGGAATGCCAGTGTaGAATGGGCTTCCGAGGATA +
Preference number: 2 (lower is better)
Translates to: GHDQHRGPLGPIKKGAQPQGMPV*NGLPRI
Trigger: TATCCTCGGAAGCCCATTGCACACTGGCATTCCCTG...GGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGTGGAGGATGTCTGAATaGGGAGGGATGAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKWRMSE*GGMSRG
Trigger: CCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCA...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHQPASR*KIAQGK
Trigger: TTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTG...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR GCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACAGAGACATGCTTCCCTaGAGCACATCACCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: LGSWHERHASLQHITLGHRDMLP*STSPWA
Trigger: GGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGTGGATGGGGTGCCTTaGACCTATAATGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: RWGTVGTAASGSPTQASIVDGVP*TYNGTE
Trigger: CTCTGTCCCATTATAGGTGCAAGGCACCCCATCCAC...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCACTGCTAGCTACTGAGTaGGTAGTGTTGGGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLALLATE*VVLGVS
Trigger: AGAGACCCCCAACACTACTCACTCAGTAGCTAGCAG...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGTACTCTTTGCCTGCTTaGCCCTACAAAGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKYSLPA*PYKATF
Trigger: GAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTA...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGGGCCAGTTAGTGCTGTaGTTACAGCTGAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKGQLVL*LQLSIW
Trigger: CCAAATGCTCAGCTGTAACCACAGCACTAACTGGCC...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 90 bp GTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTGCTCTCTCCTaGCAGCTGGAAACCCTTCTTCCTCCCCTGCACCAATGTGAAAAA +
Preference number: 2 (lower is better)
Translates to: VLHPGASLSLHAALS*QLETLLPPLHQCEK
Trigger: TTTTTCACATTGGTGCAGGGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLASWFLA*ETCFPA
Trigger: TGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTATGGAGGATGTCTGAATaGGGAGGGATGAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLWRMSE*GGMSRG
Trigger: CCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCA...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGAATGTGTGGATGGGGTaGCTTGCACCTATAATGGGA +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKNVWMG*LAPIMG
Trigger: TCCCATTATAGGTGCAAGGCACCCCATCCACACATT...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGCTATTGGAGCCAGTCTaGTTTCTCTGGGACCATTCT +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKLLEPV*FLWDHS
Trigger: AGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAG...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCGCCTCTCAGCCTCGTTaGCTACTTGACACACGCCGA +
Preference number: 2 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGASQPR*LLDTRR
Trigger: TCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGGC...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR GCA 90 bp AAGAAAAGTCGGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGTGTTCTACATCCTGGTaGCTCACTGTCACTGCACGC +
Preference number: 2 (lower is better)
Translates to: KKSRSRPAQRPTRTHQKGCSTSW*LTVTAR
Trigger: GCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACA...CCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLATCRR*LDHSGS
Trigger: TGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGC...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGCTGGGCTGTTGCATATaGAAATACCCCAGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: GTVGTAASGSPTQASIAKLGCCI*KYPRRH
Trigger: ATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAG...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 90 bp AGGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTaGCATATGGAAATACCCCAGAAGGCATTCAGGCCAGAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RKPLCVVAQGYDSGL*HMEIPQKAFRPEKP
Trigger: GGGCTTCTCTGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 90 bp CAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTaGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: QHRGPLGPIKKGAQP*KKFIPKPQGICSGS
Trigger: GCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR GCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCTTCTCCACCAGGGAATaGCAGTGTGCAATGGGCTTC +
Preference number: 2 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFFSTRE*QCAMGF
Trigger: GAAGCCCATTGCACACTGGCATTCCCTGGTGGAGAA...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR GCA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAACCTCCACCAGGGAATaGCAGTGTGCAATGGGCTTC +
Preference number: 2 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGTSTRE*QCAMGF
Trigger: GAAGCCCATTGCACACTGGCATTCCCTGGTGGAGGT...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTCTGCCTGATATCTATTaGAGCCAGTCTGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RWGTVGTAASGSPTQASILPDIY*SQSAFS
Trigger: AGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAG...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTAAAGGTAGTCATGTGTaGATTGAGATCTGCTGCCTA +
Preference number: 2 (lower is better)
Translates to: RWGTVGTAASGSPTQASIKGSHV*IEICCL
Trigger: TAGGCAGCAGATCTCAATTCACACATGACTACCTTT...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTGGGGCTGCTAGCTACTaGGTGAGTAGTGTTGGGGGT +
Preference number: 2 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPGAASY*VSSVGG
Trigger: ACCCCCAACACTACTCACTCAGTAGCTAGCAGCCCC...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCAATAACACTCCCAGTTaGAAGGAAGGGGCTGCTAGC +
Preference number: 2 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFNNTPS*KEGAAS
Trigger: GCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATT...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGAAGCTGAGTAATGAATaGGATGCCTGGGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLKLSNE*DAWGGP
Trigger: GGGCCCTCCCCAGGCATCTCATTCATTACTCAGCTT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCGTACTCTCTACCACGTaGATGGGAGGAGGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICVLSTT*MGGGSE
Trigger: TTCACTGCCTCCTCCCATGCACGTGGTAGAGAGTAC...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCGAAGCCCAAAAGCTGTaGCTTTCTATAGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFEAQKL*LSIGDG
Trigger: GCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTC...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACACGCTGCTCTCTCCTTaGAGCTGGAAACCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LREYVLAALFYILVPHCHTLLSP*SWKPFF
Trigger: GAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGT...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACACAGCCTGCTTGTCTTaGTATTCTCTTGGGGCTATT +
Preference number: 2 (lower is better)
Translates to: LGSWHERHASLQHITLGHTACLS*YSLGAI
Trigger: AATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCAGTCCTCTTACCCATaGTCATCGTTTCTCCACCAG +
Preference number: 2 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRQSSYP*SSFLHQ
Trigger: CTGGTGGAGAAACGATGACCATGGGTAAGAGGACTG...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp AGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCACTCTCTCCTTGCAGCTaGAAACCCTTCTTCCTCCCC +
Preference number: 2 (lower is better)
Translates to: RTHQKGSTALEEVHSQTSLSPCS*KPFFLP
Trigger: GGGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAG...TGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTACCAAGGGCTTCATATaGAACATTGAGTCCTGGTAC +
Preference number: 2 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSTKGFI*NIESWY
Trigger: GTACCAGGACTCAATGTTTCATATGAAGCCCTTGGT...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGGCAGTGAATTTGCTGTaGACTAGCCCTCCTTGCATT +
Preference number: 2 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRAVNLL*TSPPCI
Trigger: AATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGC...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAGTGTTGGGGGTCTCTaGTTCCTCAAAATCTGGTTT +
Preference number: 2 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSSVGGL*FLKIWF
Trigger: AAACCAGATTTTGAGGAATCAGAGACCCCCAACACT...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCAAGTGATGTATGTGTCTaGAGTGAGAAGGAAACCTCT +
Preference number: 2 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLASDVCV*SEKETS
Trigger: AGAGGTTTCCTTCTCACTTCAGACACATACATCACT...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTTCACCTTGGGCCACCTaGAGAAGGTGGCTGGACCAT +
Preference number: 2 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLASPWAT*RRWLDH
Trigger: ATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGA...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCGATTTCCAGGGCAGATaGTATGTCCTCATCACCAAG +
Preference number: 2 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFDFQGR*YVLITK
Trigger: CTTGGTGATGAGGACATAGCATCTGCCCTGGAAATC...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTACTATTGGAGCCAGTCTaGTTTCTCTGGGACCATTCT +
Preference number: 2 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLLLEPV*FLWDHS
Trigger: AGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAG...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATCAGGACACCAGAGAGTaGAGCAAGTATGCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHQDTRE*SKYAEK
Trigger: TTTCTCTGCATACTTGCTGCACTCTCTGGTGTCCTG...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACTTACAGCTGAGCATTTaGTCACTGAAATCGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LGSWHERHASLQHITLGHLQLSI*SLKSSG
Trigger: TCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAA...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDATCRR*LDHSGS
Trigger: TGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGC...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTACCTTTCTATAGGGGATaGCTGTGTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLPFYRG*LCSLSM
Trigger: CATGGAGAGAGAACACAGCCATCCCCTATAGAAAGG...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGAATAACACTCCCAGTTaGAAGGAAGGGGCTGCTAGC +
Preference number: 2 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLNNTPS*KEGAAS
Trigger: GCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTGTCATAGTCCATGACTaGTATGGACAAGTGGATTTG +
Preference number: 2 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVVIVHD*YGQVDL
Trigger: CAAATCCACTTGTCCATAGCAGTCATGGACTATGAC...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTCCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAA +
Preference number: 2 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPPAEGG*TIQVHQ
Trigger: TTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGG...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTTCAAGGTGTTCCTCTTaGTGGATGTTTTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVSRCSS*WMFSSS
Trigger: AGAAGAGGAAAACATCCACCAAGAGGAACACCTTGA...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCATGGACAAGTGGATTTaGTCAATGTTCTCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICMDKWI*SMFSGG
Trigger: CCCTCCCGAGAACATTGACCAAATCCACTTGTCCAT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGACATTGTTCTACATCCTaGTGCCTCACTGTCACTGCA +
Preference number: 2 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGHCSTS*CLTVTA
Trigger: TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATG...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 90 bp ACACAAAGCCACCTGCCTGCCATGTGGATAGTACTCTTTGCCTGCTaGCCCCTACAAAGCCACCTTCTATTTCATACCAATAAGCCAGTT +
Preference number: 2 (lower is better)
Translates to: TQSHLPAMWIVLFAC*PLQSHLLFHTNKPV
Trigger: AACTGGCTTATTGGTATGAAATAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTGGCTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTCTTCATATGAAACATTaGGTCCTGGTACTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSLHMKH*VLVLLV
Trigger: TACCAAGAGTACCAGGACTCAATGTTTCATATGAAG...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTGGGGCTGCTAGCTACTaGGTGAGTAGTGTTGGGGGT +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATGAASY*VSSVGG
Trigger: ACCCCCAACACTACTCACTCAGTAGCTAGCAGCCCC...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTGCTGTACCAGTTTCTaGGGCTGTTCCCTTAGTGGA +
Preference number: 2 (lower is better)
Translates to: AHLPSFTDNISANYPGGACCTSF*GCSLSG
Trigger: TCCACTAAGGGAACAGCCTCAGAAACTGGTACAGCA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGACCTTGGATTCTCTTTaGATCCCAGTGGTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SANYPGGASPSCFASKHWTLDSL*IPVVGS
Trigger: GCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGT...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATCACCTTGGGCCACCTaGAGAAGGTGGCTGGACCAT +
Preference number: 2 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQSPWAT*RRWLDH
Trigger: ATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCTCTTCTTCAGTCGTCTaGCATCACACATCAGCGAGA +
Preference number: 2 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCSSSVV*HHTSAR
Trigger: TCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGA...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
3UTR-3UTR GCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTGCCTCTCAGCCTCGTTaGCTACTTGACACACGCCGA +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATASQPR*LLDTRR
Trigger: TCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGGC...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCGTCCTATTTTGTCCTTaGCACAAGCAGTCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICVLFCP*HKQSSY
Trigger: GTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGAC...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAA +
Preference number: 2 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKPAEGG*TIQVHQ
Trigger: TTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGG...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGGTCTTGGTATTCTCTTaGGGCTATTCCTTGCAAATC +
Preference number: 2 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRVLVFS*GYSLQI
Trigger: GATTTGCAAGGAATAGCCCCAAGAGAATACCAAGAC...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGTATGTCTCTACCACGTGCATaGGAGGAGGCAGTGAATTTG +
Preference number: 2 (lower is better)
Translates to: LTILVALALHVLLLNTGMSLPRA*EEAVNL
Trigger: CAAATTCACTGCCTCCTCCCATGCACGTGGTAGAGA...CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGTGCTCACAGCTGTACTaGCTAGGCAAAGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: TKGQPNRMQENRGRVANGCSQLY*LGKAFQ
Trigger: CTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCA...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGGCAGTGAATTTGCTGTaGACTAGCCCTCCTTGCATT +
Preference number: 2 (lower is better)
Translates to: TKGQPNRMQENRGRVANGAVNLL*TSPPCI
Trigger: AATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGC...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTGTGTTCTCTCTCCATaGTCTCATCTCACCCATTGC +
Preference number: 2 (lower is better)
Translates to: AHLPSFTDNISANYPGGACVLSP*SHLTHC
Trigger: GCAATGGGTGAGATGAGATCATGGAGAGAGAACACA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp CTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGTATGTGTGTTCTCTCTCCATaGTCTCATCTCACCCATTGC +
Preference number: 2 (lower is better)
Translates to: LTILVALALHVLLLNTGMCVLSP*SHLTHC
Trigger: GCAATGGGTGAGATGAGATCATGGAGAGAGAACACA...CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGGGAATGCCAGTAAATCGTCTGGATGTTaGTGGATGGAAAAAGTTACT +
Preference number: 2 (lower is better)
Translates to: AQAVLLPMVIVSPPGNASKSSGC*WMEKVT
Trigger: AGTAACTTTTTCCATCCAGCAACATCCAGACGATTT...ACTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR GCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGATGACTCTGGGCTGTTaGATATGGAAATACCCCAGA +
Preference number: 2 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLMTLGC*IWKYPR
Trigger: TCTGGGGTATTTCCATATGCAACAGCCCAGAGTCAT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCAGGGAATGCCAGTGTaGAATGGGCTTCCGAGGATA +
Preference number: 2 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPQGMPV*NGLPRI
Trigger: TATCCTCGGAAGCCCATTGCACACTGGCATTCCCTG...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp GGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCAACTGCTATGGACAAGTaGATTTGGTCAATGTTCTCG +
Preference number: 2 (lower is better)
Translates to: GNMFWQHCSTSWCLTVTATAMDK*IWSMFS
Trigger: CGAGAACATTGACCAAATCCACTTGTCCATAGCAGT...TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACACTGCTATGGACAAGTaGATTTGGTCAATGTTCTCG +
Preference number: 2 (lower is better)
Translates to: LGILLGLFLANLEHFLGHTAMDK*IWSMFS
Trigger: CGAGAACATTGACCAAATCCACTTGTCCATAGCAGT...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR TCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTGGGCTTCCGAGGATATaGCAACATTTCACTCCAGTG +
Preference number: 2 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPGLPRI*QHFTPV
Trigger: CACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGACTTGGGGCTATTCCTTaGAAATCTGGAGCACTTCTT +
Preference number: 2 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRLGAIP*KSGALL
Trigger: AAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAG...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGTATGTTCCAGGGAACAGCCTaGTTGTCTTGGTATTCTCTT +
Preference number: 2 (lower is better)
Translates to: LTILVALALHVLLLNTGMFQGTA*LSWYSL
Trigger: AAGAGAATACCAAGACAAGCAGGCTGTTCCCTGGAA...CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTTCCAGGGAACAGCCTaGTTGTCTTGGTATTCTCTT +
Preference number: 2 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPFQGTA*LSWYSL
Trigger: AAGAGAATACCAAGACAAGCAGGCTGTTCCCTGGAA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTAACCCAGGCTTCCATTaGCAAGGACATGTCAGAATT +
Preference number: 2 (lower is better)
Translates to: AHLPSFTDNISANYPGGANPGFH*QGHVRI
Trigger: AATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp GGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACTACAGTTAATAGAATaGCAGGTTCCATTCAGCACA +
Preference number: 2 (lower is better)
Translates to: GNMFWQHCSTSWCLTVTALQLIE*QVPFST
Trigger: TGTGCTGAATGGAACCTGGCATTCTATTAACTGTAG...TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR GCA 90 bp TATAAACCAGCTGTAGTTTTAAGCAAAATACATTGCAGCCTCCACTGGATCATTGGAAGAGGGCAGAGCTaGTTCCAGGACACCAGAGAG +
Preference number: 2 (lower is better)
Translates to: YKPAVVLSKIHCSLHWIIGRGQS*FQDTRE
Trigger: CTCTCTGGTGTCCTGGAAGCAGCTCTGCCCTCTTCC...AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAAACTACAGCTGGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCAAGATCTTTGTGAGATaGTTGTCCTATTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSKIFVR*LSYFVL
Trigger: AAGGACAAAATAGGACAACCATCTCACAAAGATCTT...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGATGAGGCGCATAGCTaGCCATTGGTTGGCAGACTT +
Preference number: 2 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQDEAHS*PLVGRL
Trigger: AAGTCTGCCAACCAATGGCCAGCTATGCGCCTCATC...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGAAAACAGGGCCATGTTaGTACTGGTACTCTCTACCA +
Preference number: 2 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKKTGPC*YWYSLP
Trigger: TGGTAGAGAGTACCAGTATCAACATGGCCCTGTTTT...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTGTATGTGTCTGAAGTaGGAAGGAAACCTCTATGTG +
Preference number: 2 (lower is better)
Translates to: AHLPSFTDNISANYPGGACMCLK*EGNLYV
Trigger: CACATAGAGGTTTCCTTCTCACTTCAGACACATACA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTCTTGACACACGCCGATaGTCTCATTGTGACCTACAC +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATLDTRR*SHCDLH
Trigger: GTGTAGGTCACAATGAGATCATCGGCGTGTGTCAAG...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR TCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTGCCTCGTTGCCTACTTaGCACACGCCGATGATCTCA +
Preference number: 2 (lower is better)
Translates to: IFHNAHATEMYALLTNYFASLPT*HTPMIS
Trigger: TGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGC...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR GCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTCTTGGGGCTATTCCTTaGAAATCTGGAGCACTTCTT +
Preference number: 2 (lower is better)
Translates to: DAMSSSPRASYETLSPGTLGAIP*KSGALL
Trigger: AAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAG...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCTCTTCTTCAGTCGTCTaGCATCACACATCAGCGAGA +
Preference number: 2 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGSSSVV*HHTSAR
Trigger: TCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGA...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACCTGGATGTTGCTGGATaGAAAAAGTTACTTAAGATC +
Preference number: 2 (lower is better)
Translates to: LGILLGLFLANLEHFLGHLDVAG*KKLLKI
Trigger: GATCTTAAGTAACTTTTTCCATCCAGCAACATCCAG...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTTACAGCTGAGCATTTaGTCACTGAAATCGTCTGGA +
Preference number: 2 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPLQLSI*SLKSSG
Trigger: TCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATGGCCAGTTAGTGCTGTaGTTACAGCTGAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: ERIFHNAHATEMYALLTNGQLVL*LQLSIW
Trigger: CCAAATGCTCAGCTGTAACCACAGCACTAACTGGCC...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAATCACCAAACCCAATCTaGAAAGAAGGCCAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQSPNPI*KEGQLV
Trigger: CACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGA...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGATATTCCTTGCAAATCTaGAGCACTTCTTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: IYWDCCLISIGASLLSLGYSLQI*STSWGT
Trigger: TGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATA...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTTCTCTACCACGTGCATaGGAGGAGGCAGTGAATTTG +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATSLPRA*EEAVNL
Trigger: CAAATTCACTGCCTCCTCCCATGCACGTGGTAGAGA...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCCCTTTCTATAGGGGATaGCTGTGTTCTCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGPFYRG*LCSLSM
Trigger: CATGGAGAGAGAACACAGCCATCCCCTATAGAAAGG...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAATAGTACTAGGCAGCTaGGGCAATGAGAACTTTCTG +
Preference number: 2 (lower is better)
Translates to: IYWDCCLISIGASLLSLGIVLGS*GNENFL
Trigger: CAGAAAGTTCTCATTGCCCCAGCTGCCTAGTACTAT...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp AGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCATGGACAAGTGGATTTaGTCAATGTTCTCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RSSFPNLREYVLAALFYIMDKWI*SMFSGG
Trigger: CCCTCCCGAGAACATTGACCAAATCCACTTGTCCAT...GATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCTCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: HNAHATEMYALLTNYFSFSWFLA*ETCFPA
Trigger: TGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGA...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTCAATGCTCATGCCACTaGGATGTATGCCCTTCTAAC +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATQCSCH*DVCPSN
Trigger: GTTAGAAGGGCATACATCTCAGTGGCATGAGCATTG...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR TCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAATGTATGTGTCTGAAGTaGGAAGGAAACCTCTATGTG +
Preference number: 2 (lower is better)
Translates to: GFSLNPSGWKPIREVKLECMCLK*EGNLYV
Trigger: CACATAGAGGTTTCCTTCTCACTTCAGACACATACA...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGAAATCGTCTGGATGTTaGTGGATGGAAAAAGTTACT +
Preference number: 2 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLKSSGC*WMEKVT
Trigger: AGTAACTTTTTCCATCCAGCAACATCCAGACGATTT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGATCTTCTGGGCTCATCTaGCTAGCTTTACAGACAATA +
Preference number: 2 (lower is better)
Translates to: IYWDCCLISIGASLLSLGSSGLI*LALQTI
Trigger: TATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGA...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR GCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAGTCATAGTCCATGACTaGTATGGACAAGTGGATTTG +
Preference number: 2 (lower is better)
Translates to: IYWDCCLISIGASLLSLGVIVHD*YGQVDL
Trigger: CAAATCCACTTGTCCATAGCAGTCATGGACTATGAC...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTGTCCTATTTTGTCCTTaGCACAAGCAGTCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPVLFCP*HKQSSY
Trigger: GTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGAC...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCAAGATCTTTGTGAGATaGTTGTCCTATTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICKIFVR*LSYFVL
Trigger: AAGGACAAAATAGGACAACCATCTCACAAAGATCTT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTTCACCAAACCCAATCTaGAAAGAAGGCCAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPSPNPI*KEGQLV
Trigger: CACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGA...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGTATGGAGTCCTGGTACTCTTaGTACTGTCACTATATCTAT +
Preference number: 2 (lower is better)
Translates to: LTILVALALHVLLLNTGMESWYS*YCHYIY
Trigger: ATAGATATAGTGACAGTACCAAGAGTACCAGGACTC...CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TATAAACCAGCTGTAGTTTTAAGCAAAATACATTGCAGCCTCCACTGGATCATTCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: YKPAVVLSKIHCSLHWIIQPASR*KIAQGK
Trigger: TTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTG...AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAAACTACAGCTGGTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGTCAAGGTGTTCCTCTTaGTGGATGTTTTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKSRCSS*WMFSSS
Trigger: AGAAGAGGAAAACATCCACCAAGAGGAACACCTTGA...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CCA 90 bp ACAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGGCTCTAAAGAAAATGTaGTACGGAGGACAGATAACA +
Preference number: 2 (lower is better)
Translates to: TGFKVFLLVDVFLFFSRLALKKM*YGGQIT
Trigger: TGTTATCTGTCCTCCGTACCACATTTTCTTTAGAGC...CAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 90 bp AGGGCAGATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGTACTGTCACTATATCTATCATTTGT +
Preference number: 2 (lower is better)
Translates to: RADAMSSSPRASYET*SPGTLGTVTISIIC
Trigger: ACAAATGATAGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATCTGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 90 bp AGTTTTCCTTATGTCATCAGACATAGGCAGAACCTTGGATTCTCTTaGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAA +
Preference number: 2 (lower is better)
Translates to: SFPYVIRHRQNLGFS*NPSGWKPIREVKLE
Trigger: TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTTCTGCCTATGTCTGATGACATAAGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 90 bp GATGTTGCTGGATGGAAAAAGTTACTTAAGATCTTTGTGAGATGGTaGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCTTACCCATGGT +
Preference number: 2 (lower is better)
Translates to: DVAGWKKLLKIFVRW*SYFVLGTSSPLTHG
Trigger: ACCATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAGTAACTTTTTCCATCCAGCAACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR TCA 90 bp TATAAACCAGCTGTAGTTTTAAGCAAAATACATTGCAGCCTCCACTGGATCATTCACGGTCATAGTCCATaGCTGCTATGGACAAGTGGA +
Preference number: 2 (lower is better)
Translates to: YKPAVVLSKIHCSLHWIIHGHSP*LLWTSG
Trigger: TCCACTTGTCCATAGCAGTCATGGACTATGACCGTG...AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAAACTACAGCTGGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp TATAAACCAGCTGTAGTTTTAAGCAAAATACATTGCAGCCTCCACTGGATCATTCTTGACACACGCCGATaGTCTCATTGTGACCTACAC +
Preference number: 2 (lower is better)
Translates to: YKPAVVLSKIHCSLHWIILDTRR*SHCDLH
Trigger: GTGTAGGTCACAATGAGATCATCGGCGTGTGTCAAG...AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAAACTACAGCTGGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR TCA 90 bp TATAAACCAGCTGTAGTTTTAAGCAAAATACATTGCAGCCTCCACTGGATCATTGGGCTTCCGAGGATATaGCAACATTTCACTCCAGTG +
Preference number: 2 (lower is better)
Translates to: YKPAVVLSKIHCSLHWIIGLPRI*QHFTPV
Trigger: CACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC...AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAAACTACAGCTGGTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAGGCACAGTTATTTTCTaGAGACAGTCATTAGCTCAA +
Preference number: 2 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQGTVIF*RQSLAQ
Trigger: TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCC...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTATCTGGAGCACTTCTTaGGGCACAGTTATTTTCTGG +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATIWSTS*GTVIFW
Trigger: CCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCATCTGGAGCACTTCTTaGGGCACAGTTATTTTCTGG +
Preference number: 2 (lower is better)
Translates to: HNAHATEMYALLTNYFSFIWSTS*GTVIFW
Trigger: CCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTGGCACAGTTATTTTCTaGAGACAGTCATTAGCTCAA +
Preference number: 2 (lower is better)
Translates to: LLFILITLPVERKGLLATGTVIF*RQSLAQ
Trigger: TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCC...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAATTTCCATCCCCAAGTaGTGTGAAAGTGATGTATGT +
Preference number: 2 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQISIPK*CESDVC
Trigger: ACATACATCACTTTCACACCACTTGGGGATGGAAAT...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCCACGCTGCTCTCTCCTaGCAGCTGGAAACCCTTCTT +
Preference number: 3 (lower is better)
Translates to: GHDQHRGPLGPIKKGAQPHAALS*QLETLL
Trigger: AAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTG...GGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CCA 72 bp CCCTGCAGCACATCACCTTGGGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCACCAAACCCAATCTGG +
Preference number: 3 (lower is better)
Translates to: PCSTSPWATCRR*LDHSGSPNPIW
Trigger: CCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp CCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTaGAGCACATCACCTTGGGCCACCTGCAGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: PILVLGMRDMLP*STSPWATCRRW
Trigger: CCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp CGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTaGCCATTGGTTGGCAGACTTGGTCAGGAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: RGGRSNEDEAHS*PLVGRLGQEGS
Trigger: GCTTCCTTCCTGACCAAGTCTGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAAACCCAATCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: AAHHLGPPAEGG*TIQVHQTQSGK
Trigger: CTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp GACACCAGAGAGTGCAGCAAGTATGCAGAGAAAACCTaGGCACCAAGAGACCTCCACCAGGGAATGCCAGTG +
Preference number: 3 (lower is better)
Translates to: DTRECSKYAEKT*APRDLHQGMPV
Trigger: CACTGGCATTCCCTGGTGGAGGTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CAA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGGCCTGGGGAGGGCCCTaGACCTTCACTCTTGTAGGT +
Preference number: 3 (lower is better)
Translates to: SANYPGGASPSCFASKHWAWGGP*TFTLVG
Trigger: ACCTACAAGAGTGAAGGTCAAGGGCCCTCCCCAGGC...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTTATGGACAAGTGGATTaGGTCAATGTTCTCGGGAGG +
Preference number: 3 (lower is better)
Translates to: RWGTVGTAASGSPTQASIYGQVD*VNVLGR
Trigger: CCTCCCGAGAACATTGACCAAATCCACTTGTCCATA...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR GCA 72 bp CCAGAAGGCATTCAGGCCAGAGAAGCCCAAAAGCTGTaGCTTTCTATAGGGGATGGCTGTGTTCTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: PEGIQAREAQKL*LSIGDGCVLSP
Trigger: TGGAGAGAGAACACAGCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTCTCTGGCCTGAATGCCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATaGAAATACCCCAGAAGGCATTCAGGCCAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: WLPKAMTLGCCI*KYPRRHSGQRS
Trigger: GCTTCTCTGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATCTTGGGGCTATTCCTaGCAAATCTGGAGCACTTCT +
Preference number: 3 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLASWGYS*QIWSTS
Trigger: AGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGTCAGCCTGCCAGCCGTaGGAAGATAGCACAGGGAAA +
Preference number: 3 (lower is better)
Translates to: THQKGSTALEEVHSQTSGSACQP*EDSTGK
Trigger: TTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGA...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CAA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACTGTCCTATTTTGTCCTaGGCACAAGCAGTCCTCTTA +
Preference number: 3 (lower is better)
Translates to: LGSWHERHASLQHITLGHCPILS*AQAVLL
Trigger: TAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACA...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGT +
Preference number: 3 (lower is better)
Translates to: RWGTVGTAASGSPTQASIASYET*SPGTLG
Trigger: ACCAAGAGTACCAGGACTCAATGTTTCATATGAAGC...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp TATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTaGATATGGAAATACCCCAGAAGGCATTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: YVWLPKAMTLGC*IWKYPRRHSGQ
Trigger: CTGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp AGCCACCTGCCTGCCATGTGGATAGTACTCTTTGCCTaGTTGCCCCTACAAAGCCACCTTCTATTTCATACC +
Preference number: 3 (lower is better)
Translates to: SHLPAMWIVLFA*LPLQSHLLFHT
Trigger: GGTATGAAATAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp AGGTGGCTGGACCATTCAGGTTCACCAAACCCAATCTaGAAAGAAGGCCAGTTAGTGCTGTGGTTACAGCTG +
Preference number: 3 (lower is better)
Translates to: RWLDHSGSPNPI*KEGQLVLWLQL
Trigger: CAGCTGTAACCACAGCACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp CTATTTTGTCCTTGGCACAAGCAGTCCTCTTACCCATaGTCATCGTTTCTCCACCAGGGAATGCCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: LFCPWHKQSSYP*SSFLHQGMPVC
Trigger: GCACACTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR-3UTR CAA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTGATGGTTGTCCTATTTaGTCCTTGGCACAAGCAGTC +
Preference number: 3 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPDGCPI*SLAQAV
Trigger: GACTGCTTGTGCCAAGGACAAAATAGGACAACCATC...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAATCTGGAGCACTTCTaGGGGCACAGTTATTTTCTG +
Preference number: 3 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSNLEHF*GHSYFL
Trigger: CAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATT...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGTCTTGGGGCTATTCCTaGCAAATCTGGAGCACTTCT +
Preference number: 3 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRSWGYS*QIWSTS
Trigger: AGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGA...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTATGGACAAGTGGATTaGGTCAATGTTCTCGGGAGG +
Preference number: 3 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHYGQVD*VNVLGR
Trigger: CCTCCCGAGAACATTGACCAAATCCACTTGTCCATA...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR TCA 72 bp ACTGGTACTCTCTACCACGTGCATGGGAGGAGGCAGTaGATTTGCTGTGAACTAGCCCTCCTTGCATTAGAT +
Preference number: 3 (lower is better)
Translates to: TGTLYHVHGRRQ*ICCELALLALD
Trigger: ATCTAATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGCCTCCTCCCATGCACGTGGTAGAGAGTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp ACAAAGCCACCTGCCTGCCATGTGGATAGTACTCTTTaGCTGCTTGCCCCTACAAAGCCACCTTCTATTTCA +
Preference number: 3 (lower is better)
Translates to: TKPPACHVDSTL*LLAPTKPPSIS
Trigger: TGAAATAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTGGCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGTTACAGCTGAGCATTaGGTCACTGAAATCGTCTGG +
Preference number: 3 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSVTAEH*VTEIVW
Trigger: CCAGACGATTTCAGTGACCAAATGCTCAGCTGTAAC...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACGTTCATAGTCCGATCTaGGTTCTTGGCATGAGAGAC +
Preference number: 3 (lower is better)
Translates to: LGILLGLFLANLEHFLGHVHSPI*VLGMRD
Trigger: GTCTCTCATGCCAAGAACCAAGATCGGACTATGAAC...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGCAACCCAGGCTTCCATaGCCAAGGACATGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: SANYPGGASPSCFASKHWQPRLP*PRTCQN
Trigger: ATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTTG...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTTCAGCCTGCCAGCCGTaGGAAGATAGCACAGGGAAA +
Preference number: 3 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLASACQP*EDSTGK
Trigger: TTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGA...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR GCA 72 bp CTATCTTGGAGTAGTGGTGCAAATGTGTGGATGGGGTaGCTTGCACCTATAATGGGACAGAGAGGACCATTA +
Preference number: 3 (lower is better)
Translates to: LSWSSGANVWMG*LAPIMGQRGPL
Trigger: TAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCACCCCATCCACACATTTGCACCACTACTCCAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp AATGGGCTGAGGGAGTTCAAATTTATAACCAGCCTCTaGTCACAGCTGTACTGGCTAGGCAAAGCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: NGLREFKFITSL*SQLYWLGKAFQ
Trigger: CTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAATTTGAACTCCCTCAGCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp TTTCCAGGGAACAGCCTGCTTGTCTTGGTATTCTCTTaGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGG +
Preference number: 3 (lower is better)
Translates to: FPGNSLLVLVFS*GYSLQIWSTSW
Trigger: CCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGTTCCCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp TGCTTTTATAATGGTAATGGTCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAACATCAGCTCTCCCAG +
Preference number: 3 (lower is better)
Translates to: CFYNGNGQPASR*KIAQGKHQLSQ
Trigger: CTGGGAGAGCTGATGTTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGACCATTACCATTATAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CAA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGAAATCGTCTGGATGTaGCTGGATGGAAAAAGTTAC +
Preference number: 3 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSEIVWM*LDGKSY
Trigger: GTAACTTTTTCCATCCAGCAACATCCAGACGATTTC...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGAACCTTGGATTCTCTTaGAATCCCAGTGGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLNLGFS*NPSGWK
Trigger: CTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 72 bp TTGTTTTTGTTCATAGTCCGATCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCAGCACATCACCTTGGG +
Preference number: 3 (lower is better)
Translates to: LFLFIVRSWFLA*ETCFPAAHHLG
Trigger: CCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACTATGAACAAAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 72 bp GGCAGATGCTATGTCCTCATCACCAAGGGCTTCATATaGAACATTGAGTCCTGGTACTCTTGGTACTGTCAC +
Preference number: 3 (lower is better)
Translates to: GRCYVLITKGFI*NIESWYSWYCH
Trigger: GTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 72 bp TCCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTaGAGTGAGAAGGAAACCTCTATGTGTGGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: SIPKWCESDVCV*SEKETSMCGCP
Trigger: TGGGCAACCACACATAGAGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp GCCTGCTTGTCTTGGTATTCTCTTGGGGCTATTCCTTaGAAATCTGGAGCACTTCTTGGGGCACAGTTATTT +
Preference number: 3 (lower is better)
Translates to: ACLSWYSLGAIP*KSGALLGAQLF
Trigger: AAATAACTGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACAAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp CCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGCTGTaGTTACAGCTGAGCATTTGGTCACTGAAATCGTCT +
Preference number: 3 (lower is better)
Translates to: PNPIWKEGQLVL*LQLSIWSLKSS
Trigger: AGACGATTTCAGTGACCAAATGCTCAGCTGTAACCACAGCACTAACTGGCCTTCTTTCCAGATTGGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp TTCAAATTTATAACCAGCCTCTGCTCACAGCTGTACTaGCTAGGCAAAGCTTTCCAGACACAAAGCCACCTG +
Preference number: 3 (lower is better)
Translates to: FKFITSLCSQLY*LGKAFQTQSHL
Trigger: CAGGTGGCTTTGTGTCTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAATTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp GAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTaGCAGCATTGTTCTACATCCTGGTGCCTCACTGTC +
Preference number: 3 (lower is better)
Translates to: EEVHSQTSGNMF*QHCSTSWCLTV
Trigger: GACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CAA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTAGATGGTTGTCCTATTTaGTCCTTGGCACAAGCAGTC +
Preference number: 3 (lower is better)
Translates to: EHFLGHSYFLETVISSKVDGCPI*SLAQAV
Trigger: GACTGCTTGTGCCAAGGACAAAATAGGACAACCATC...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTGTTCATAGTCCGATCTaGGTTCTTGGCATGAGAGAC +
Preference number: 3 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAVHSPI*VLGMRD
Trigger: GTCTCTCATGCCAAGAACCAAGATCGGACTATGAAC...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAAATCTGGAGCACTTCTaGGGGCACAGTTATTTTCTG +
Preference number: 3 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRNLEHF*GHSYFL
Trigger: CAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATT...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAACAGCCTGCTTGTCTaGGTATTCTCTTGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQNSLLV*VFSWGY
Trigger: ATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGTT...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGTATGACTCTGGGCTGTaGCATATGGAAATACCCCAG +
Preference number: 3 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKYDSGL*HMEIPQ
Trigger: CTGGGGTATTTCCATATGCAACAGCCCAGAGTCATA...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACCTCCTGTTATGTCCATaGCCTTTAAATTCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: LREYVLAALFYILVPHCHLLLCP*PLNSLL
Trigger: AAGCAAGGAATTTAAAGGCAATGGACATAACAGGAG...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR-3UTR CAA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTTCAAGGTGTTCCTCTaGGTGGATGTTTTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDFKVFL*VDVFLF
Trigger: GAAGAGGAAAACATCCACCAAGAGGAACACCTTGAA...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
3UTR CCA 72 bp TCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTaGGGCACAGTTATTTTCTGGAGACAGTCATTAGCT +
Preference number: 3 (lower is better)
Translates to: SWGYSLQIWSTS*GTVIFWRQSLA
Trigger: AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp ATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTaGGCTCATCTGCCTAGCTTTACAGACAATATTTCT +
Preference number: 3 (lower is better)
Translates to: IGASLLSLGPFF*AHLPSFTDNIS
Trigger: AGAAATATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTTGTCCTATTTTGTCCTaGGCACAAGCAGTCCTCTTA +
Preference number: 3 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLACPILS*AQAVLL
Trigger: TAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACA...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGATCTTTGTGAGATGGTaGTCCTATTTTGTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: TKGQPNRMQENRGRVANGIFVRW*SYFVLG
Trigger: GCCAAGGACAAAATAGGACAACCATCTCACAAAGAT...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTGTTACAGCTGAGCATTaGGTCACTGAAATCGTCTGG +
Preference number: 3 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPVTAEH*VTEIVW
Trigger: CCAGACGATTTCAGTGACCAAATGCTCAGCTGTAAC...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGT +
Preference number: 3 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRASYET*SPGTLG
Trigger: ACCAAGAGTACCAGGACTCAATGTTTCATATGAAGC...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTTTCAAGGTGTTCCTCTaGGTGGATGTTTTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: DAMSSSPRASYETLSPGTFKVFL*VDVFLF
Trigger: GAAGAGGAAAACATCCACCAAGAGGAACACCTTGAA...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR GCA 72 bp GTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTaGCTAGCTTTACAGACAATATTTCTGCTAACTATC +
Preference number: 3 (lower is better)
Translates to: VCFLWDHSSGLI*LALQTIFLLTI
Trigger: GATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp CATTGCCAAGGACATGTCAGAATTTATTGGGATTGCTaGCTGATATCTATTGGAGCCAGTCTGCTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: HCQGHVRIYWDC*LISIGASLLSL
Trigger: CAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp AGAAAAATACTATCTTGGAGTAGTGGTGCAAATGTGTaGATGGGGTGCCTTGCACCTATAATGGGACAGAGA +
Preference number: 3 (lower is better)
Translates to: RKILSWSSGANV*MGCLAPIMGQR
Trigger: TCTCTGTCCCATTATAGGTGCAAGGCACCCCATCCACACATTTGCACCACTACTCCAAGATAGTATTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp TGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTaGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTG +
Preference number: 3 (lower is better)
Translates to: CQNLLGLLPDIY*SQSAFSGTILL
Trigger: CAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp AAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATaGGCTGAGGGAGTTCAAATTTATAACCAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: KQNAREQRQSCK*AEGVQIYNQPL
Trigger: CAGAGGCTGGTTATAAATTTGAACTCCCTCAGCCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGAAATCGTCTGGATGTaGCTGGATGGAAAAAGTTAC +
Preference number: 3 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAEIVWM*LDGKSY
Trigger: GTAACTTTTTCCATCCAGCAACATCCAGACGATTTC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAGTAGTCATGTGTGAATaGAGATCTGCTGCCTATTTA +
Preference number: 3 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRVVMCE*RSAAYL
Trigger: TAAATAGGCAGCAGATCTCAATTCACACATGACTAC...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATGAAAACAGGGCCATGTaGATACTGGTACTCTCTACC +
Preference number: 3 (lower is better)
Translates to: ERIFHNAHATEMYALLTNENRAM*ILVLST
Trigger: GGTAGAGAGTACCAGTATCAACATGGCCCTGTTTTC...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR GCA 72 bp TTCCATTGCCAAGGACATGTCAGAATTTATTGGGATTaGTGCCTGATATCTATTGGAGCCAGTCTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: FHCQGHVRIYWD*CLISIGASLLS
Trigger: AGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGTAGTCATGTGTGAATaGAGATCTGCTGCCTATTTA +
Preference number: 3 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAVVMCE*RSAAYL
Trigger: TAAATAGGCAGCAGATCTCAATTCACACATGACTAC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATTTGAATCCCAGTGGTaGGAAGCCAATCAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQFESQW*EANQRS
Trigger: ACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACAGAATTTATTGGGATaGCTGCCTGATATCTATTGG +
Preference number: 3 (lower is better)
Translates to: IYWDCCLISIGASLLSLGQNLLG*LPDIYW
Trigger: CCAATAGATATCAGGCAGCAATCCCAATAAATTCTG...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR TCA 72 bp CTATGTCCTCATCACCAAGGGCTTCATATGAAACATTaGGTCCTGGTACTCTTGGTACTGTCACTATATCTA +
Preference number: 3 (lower is better)
Translates to: LCPHHQGLHMKH*VLVLLVLSLYL
Trigger: TAGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp GTGGTTACAGCTGAGCATTTGGTCACTGAAATCGTCTaGATGTTGCTGGATGGAAAAAGTTACTTAAGATCT +
Preference number: 3 (lower is better)
Translates to: VVTAEHLVTEIV*MLLDGKSYLRS
Trigger: AGATCTTAAGTAACTTTTTCCATCCAGCAACATCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CCA 72 bp CATCAAAGTAGAGCTTCTTGTATAGTACTAGGCAGCTaGGGCAATGAGAACTTTCTGAAGACGTATAACGAT +
Preference number: 3 (lower is better)
Translates to: HQSRASCIVLGS*GNENFLKTYND
Trigger: ATCGTTATACGTCTTCAGAAAGTTCTCATTGCCCCAGCTGCCTAGTACTATACAAGAAGCTCTACTTTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTTGTCTTGGTATTCTCTaGGGGCTATTCCTTGCAAAT +
Preference number: 3 (lower is better)
Translates to: LLFILITLPVERKGLLATCLGIL*GLFLAN
Trigger: ATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACA...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTGAAAACAGGGCCATGTaGATACTGGTACTCTCTACC +
Preference number: 3 (lower is better)
Translates to: IFHNAHATEMYALLTNYFENRAM*ILVLST
Trigger: GGTAGAGAGTACCAGTATCAACATGGCCCTGTTTTC...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAACTAGCCCTTCATGTTTaGCTTCTAAACACTGGTATG +
Preference number: 3 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQLALHV*LLNTGM
Trigger: CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAG...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR-3UTR CAA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCTCCTGTTATGTCCATaGCCTTTAAATTCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPLLLCP*PLNSLL
Trigger: AAGCAAGGAATTTAAAGGCAATGGACATAACAGGAG...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
3UTR TCA 72 bp TATAACGATCCTTCCTCCGCCCAGTTAGTTCCATGCTaGAATGTTAATTCAAACAGAGATAATGAGCTTTCC +
Preference number: 3 (lower is better)
Translates to: YNDPSSAQLVPC*NVNSNRDNELS
Trigger: GGAAAGCTCATTATCTCTGTTTGAATTAACATTTCAGCATGGAACTAACTGGGCGGAGGAAGGATCGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCGCGGAGCCGGGGTCTaGCACGGTCCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHRGAGV*HGPAGG
Trigger: ACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCG...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATCCTGGCAGCTGTCGTaGTCCAGGGCCCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLASWQLS*SRAPRA
Trigger: TGCCCGTGGGGCCCTGGAGCACGACAGCTGCCAGGA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHSVTWR*TRTPWA
Trigger: TGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCCCGGGCCGACGAGGTTaGCTCTGTGACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCPGRRG*LCDLAL
Trigger: CAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGG...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTGCACGCGGACGCCATaGGCACAGTTCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHCTRTP*AQFSWI
Trigger: GATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTGAAACGGTGCGAGCCTaGGCCCGAGCCCCAGACCCA +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPETVRA*ARAPDP
Trigger: TGGGTCTGGGGCTCGGGCTCAGGCTCGCACCGTTTC...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCAACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLATRLAL*LGAARG
Trigger: TCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGT...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTCACCTTGGGCCACCTaGAGAAGGTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHSPWAT*RRWLDH
Trigger: ATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGTCTAGGAAGTaGTCCACCACCACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RWGTVGTAASGSPTQASIAKSRK*STTTWP
Trigger: CGGCCAAGTGGTGGTGGATCACTTCCTAGACTTGGC...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTCACCGCCAGGGACCTaGCGAGAAACGGTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPSPPGT*RETVRA
Trigger: GGCTCGCACCGTTTCTCGGCAGGTCCCTGGCGGTGA...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CCA 90 bp ATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTGCGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCA +
Preference number: 4 (lower is better)
Translates to: MFWQHCSTSWCLTVTARCVGSVT*RCTRTP
Trigger: TGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAAC...GCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGCCCGCAGGTGGTAAATaGAATCCTGGCAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: GTVGTAASGSPTQASIAKPAGGK*NPGSCR
Trigger: ACGACAGCTGCCAGGATTTCATTTACCACCTGCGGG...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTAGAGACATGCTTCCCTaGAGCACATCACCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RWGTVGTAASGSPTQASIRDMLP*STSPWA
Trigger: GGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCT...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACGTACTCTCTACCACGTaGATGGGAGGAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHVLSTT*MGGGSE
Trigger: TTCACTGCCTCCTCCCATGCACGTGGTAGAGAGTAC...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAACGCGGAGCCGGGGTCTaGCACGGTCCCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLERGAGV*HGPAGG
Trigger: ACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCG...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTTGGGCACAGTTCTCCTaGATCCCCGTCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVWAQFS*IPVWVE
Trigger: CTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCA...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCA +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRVGSVT*RCTRTP
Trigger: TGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAAC...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCCGCATAGCTGGCCATTaGTTGGCAGACTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCRIAGH*LADLVR
Trigger: CCTGACCAAGTCTGCCAACCAATGGCCAGCTATGCG...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACCACCTGCCTGCCATGTaGATAGTACTCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHHLPAM*IVLFAC
Trigger: GCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTG...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: LREYVLAALFYILVPHCHTRLAL*LGAARG
Trigger: TCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGT...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCCCTTGGCGGGCAAATTaGCAGCTTTGTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: GHDQHRGPLGPIKKGAQPPWRAN*QLCESS
Trigger: TGAAGATTCACAAAGCTGTCAATTTGCCCGCCAAGG...GGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTGGCCGATTAAGTCATaGCGAGAGAACCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GHDQHRGPLGPIKKGAQPWPIKS*RENLSK
Trigger: CTTTGACAGGTTCTCTCGTCATGACTTAATCGGCCA...GGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACCACGGTCATAGTCCATaGCTGCTATGGACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHHGHSP*LLWTSG
Trigger: TCCACTTGTCCATAGCAGTCATGGACTATGACCGTG...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACGGGCTTCCGAGGATATaGCAACATTTCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHGLPRI*QHFTPV
Trigger: CACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTGCTGTACCAGTTTCTaGGGCTGTTCCCTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHCCTSF*GCSLSG
Trigger: TCCACTAAGGGAACAGCCTCAGAAACTGGTACAGCA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCGGGCCCTTTCAAGGCTaGGCCAGGTTGGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGGPFQG*ARLEEG
Trigger: GCCCTCTTCCAACCTGGCTCAGCCTTGAAAGGGCCC...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACCTCCCACCGGTTGCATaGAGCTCTTCGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGILLGLFLANLEHFLGHLPPVA*SSSPAG
Trigger: ACCGGCTGGCGAAGAGCTGCATGCAACCGGTGGGAG...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTTTCTCCACCAGGGAATaGCAGTGTGCAATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RWGTVGTAASGSPTQASIFSTRE*QCAMGF
Trigger: GAAGCCCATTGCACACTGGCATTCCCTGGTGGAGAA...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACGAAGCCCAAAAGCTGTaGCTTTCTATAGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHEAQKL*LSIGDG
Trigger: GCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTC...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AAGAAAAGTCGGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGGGAAGAGGGCAGAGCTaGTTCCAGGACACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KKSRSRPAQRPTRTHQKGGRGQS*FQDTRE
Trigger: CTCTCTGGTGTCCTGGAAGCAGCTCTGCCCTCTTCC...CCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAGTCAGGGCAGGGCGTaGGAGGATCTAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSSQGRA*EDLGSP
Trigger: AGGACTTCCTAGATCCTCCCACGCCCTGCCCTGACT...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGACACCAGAGAGTGCAGCAAGTATGCAGAGAAAACCTGGGCACCAAGAGACCTAGTCAGGGCAGGGCGTaGGAGGATCTAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GHQRVQQVCRENLGTKRPSQGRA*EDLGSP
Trigger: AGGACTTCCTAGATCCTCCCACGCCCTGCCCTGACT...AGGTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp AGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCACCGGGCCGACGAGGTTaGCTCTGTGACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RTHQKGSTALEEVHSQTSPGRRG*LCDLAL
Trigger: CAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGG...TGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTCCAGTCTGCTTTCTCTaGGACCATTCTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RWGTVGTAASGSPTQASIPVCFL*DHSSGL
Trigger: GAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGG...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCAGGAAGCTTCTGAGGTaGGGAACAGTAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCRKLLR*GTVGTA
Trigger: AGCTGTGCCTACTGTTCCCCACCTCAGAAGCTTCCT...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCGTATCCCAAGGCTGCTaGCTCTCTGGGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSVSQGC*LSGQEA
Trigger: AGCTTCCTGCCCAGAGAGCCAGCAGCCTTGGGATAC...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGGTCAGCAGGCTCACTaGGATATCTGGGTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSGQQAH*DIWVAE
Trigger: CTCCGCGACCCAGATATCTCAGTGAGCCTGCTGACC...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATGCCAAGTCTAGGAAGTaGTCCACCACCACTTGGCCG +
Preference number: 4 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHAKSRK*STTTWP
Trigger: CGGCCAAGTGGTGGTGGATCACTTCCTAGACTTGGC...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCGGGGCTGCTAGCTACTaGGTGAGTAGTGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFGAASY*VSSVGG
Trigger: ACCCCCAACACTACTCACTCAGTAGCTAGCAGCCCC...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGGGATCCCCGTCTGGGTaGAGAGGGGAATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWGSPSG*RGECQG
Trigger: CCCCTGACATTCCCCTCTCCACCCAGACGGGGATCC...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGTGCACGCGGACGCCATaGGCACAGTTCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: THQKGSTALEEVHSQTSGCTRTP*AQFSWI
Trigger: GATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCA...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCA +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCVGSVT*RCTRTP
Trigger: TGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAAC...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR CCA 90 bp GGCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGGGAATGCCAGCACCTGCCTGCCATGTaGATAGTACTCTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTSSPLTHGHRFSTRECQHLPAM*IVLFAC
Trigger: GCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTG...CTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR TCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGCGAGACCACAGGCAGTaGCCACAAGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRRDHRQ*PQGSAG
Trigger: GCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCG...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTCGAGACCACAGGCAGTaGCCACAAGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGARDHRQ*PQGSAG
Trigger: GCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCG...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTGCGAGTTGTCTTCGGATTaGATTATGCCGGGCCGACGA +
Preference number: 4 (lower is better)
Translates to: MFWQHCSTSWCLTVTARCELSSD*IMPGRR
Trigger: TCGTCGGCCCGGCATAATTCAATCCGAAGACAACTC...GCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTCATGGGAGGAGGCAGTaGATTTGCTGTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSHGRRQ*ICCELA
Trigger: GGCTAGTTCACAGCAAATTCACTGCCTCCTCCCATG...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAGCTGAGTAATGAATaGGATGCCTGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNLYVWLPKAMTLGCCIWKLSNE*DAWGGP
Trigger: GGGCCCTCCCCAGGCATCTCATTCATTACTCAGCTT...CCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTGCGGTCAGCAGGCTCACTaGGATATCTCTGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MFWQHCSTSWCLTVTARCGQQAH*DISASF
Trigger: AAAGGAGGCAGAGATATCTCAGTGAGCCTGCTGACC...GCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGCCTGGTTGTTGTCTTTaGTACCAGAGGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GNLYVWLPKAMTLGCCIWPGCCL*YQRAGL
Trigger: GAGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGG...CCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACAAGTGGATTTGGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: TSGFGQCSREGHQRLWLRSVTWR*TRTPWA
Trigger: TGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGA...ACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR GCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATACTCTTTGCCTGCTTaGCCCTACAAAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLAYSLPA*PYKATF
Trigger: GAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGGTGCCTCACTGTCACTaGACGCTGCTCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: THQKGSTALEEVHSQTSGVPHCH*TLLSPC
Trigger: GCAAGGAGAGAGCAGCGTGCAGTGACAGTGAGGCAC...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCAGTCAGGGCAGGGCGTaGGAGGATCTAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICSQGRA*EDLGSP
Trigger: AGGACTTCCTAGATCCTCCCACGCCCTGCCCTGACT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ACAAGTGGATTTGGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTGGATCCCCGTCTGGGTaGAGAGGGGAATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TSGFGQCSREGHQRLWLRGSPSG*RGECQG
Trigger: CCCCTGACATTCCCCTCTCCACCCAGACGGGGATCC...ACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR TCA 90 bp ACAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGGGTCAGCAGGCTCACTaGGATATCTGGGTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: TGFKVFLLVDVFLFFSRLGQQAH*DIWVAE
Trigger: CTCCGCGACCCAGATATCTCAGTGAGCCTGCTGACC...CAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR TCA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGGCCTCGTTGCCTACTTaGCACACGCCGATGATCTCA +
Preference number: 4 (lower is better)
Translates to: THQKGSTALEEVHSQTSGASLPT*HTPMIS
Trigger: TGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGC...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACGCAGTGAATTTGCTGTaGACTAGCCCTCCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHAVNLL*TSPPCI
Trigger: AATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGC...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGAAAACAGGGCCATGTTaGTACTGGTACTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: GTVGTAASGSPTQASIAKKTGPC*YWYSLP
Trigger: TGGTAGAGAGTACCAGTATCAACATGGCCCTGTTTT...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGCTGCTAGCTACTGAGTaGGTAGTGTTGGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GNLYVWLPKAMTLGCCIWLLATE*VVLGVS
Trigger: AGAGACCCCCAACACTACTCACTCAGTAGCTAGCAG...CCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGGGGGCTGCTAGCTACTaGGTGAGTAGTGTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLGAASY*VSSVGG
Trigger: ACCCCCAACACTACTCACTCAGTAGCTAGCAGCCCC...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCAACCTTGGATTCTCTTTaGATCCCAGTGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLATLDSL*IPVVGS
Trigger: GCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGT...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATCCTGGCAGCTGTCGTaGTCCAGGGCCCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQSWQLS*SRAPRA
Trigger: TGCCCGTGGGGCCCTGGAGCACGACAGCTGCCAGGA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCGAAGCCCAAAAGCTGTaGCTTTCTATAGGGGATGGC +
Preference number: 4 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSEAQKL*LSIGDG
Trigger: GCCATCCCCTATAGAAAGGCACAGCTTTTGGGCTTC...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGGTGGATGGGGTGCCTTaGACCTATAATGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRVDGVP*TYNGTE
Trigger: CTCTGTCCCATTATAGGTGCAAGGCACCCCATCCAC...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTCTTCTGGGCTCATCTaGCTAGCTTTACAGACAATA +
Preference number: 4 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHSSGLI*LALQTI
Trigger: TATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCAATAGTACTCTTTGCCTaGTTGCCCCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLAIVLFA*LPLQSH
Trigger: GTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTAT...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGACCTCCACCAGGGAATaGCAGTGTGCAATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: THQKGSTALEEVHSQTSGTSTRE*QCAMGF
Trigger: GAAGCCCATTGCACACTGGCATTCCCTGGTGGAGGT...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGATGGGCACAGTTCTCCTaGATCCCCGTCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRWAQFS*IPVWVE
Trigger: CTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCA...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHQPASR*KIAQGK
Trigger: TTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTG...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCCCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFPAEGG*TIQVHQ
Trigger: TTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGG...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAAGTGGTGCAAATGTGTaGATGGGGTGCCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLSGANV*MGCLAP
Trigger: AGGTGCAAGGCACCCCATCCACACATTTGCACCACT...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCATAGTACTAGGCAGCTaGGGCAATGAGAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCIVLGS*GNENFL
Trigger: CAGAAAGTTCTCATTGCCCCAGCTGCCTAGTACTAT...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTCTGGGACCATTCTTCTaGGCTCATCTGCCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSLGPFF*AHLPSF
Trigger: AAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAG...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGGGAATGCCAGTTGCTCACAGCTGTACTaGCTAGGCAAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQAVLLPMVIVSPPGNASCSQLY*LGKAFQ
Trigger: CTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCA...ACTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR TCA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGA +
Preference number: 4 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGTRLAL*LGAARG
Trigger: TCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGT...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCTCGTACACAGAGAAGTaGAGCTTCCGTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFSYTEK*SFRASR
Trigger: CCTTGAAGCACGGAAGCTTCACTTCTCTGTGTACGA...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCGTACACAGAGAAGTaGAGCTTCCGTGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHSYTEK*SFRASR
Trigger: CCTTGAAGCACGGAAGCTTCACTTCTCTGTGTACGA...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGGCCTCGTTGCCTACTTaGCACACGCCGATGATCTCA +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLASLPT*HTPMIS
Trigger: TGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGC...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGTCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GNLYVWLPKAMTLGCCIWSWFLA*ETCFPA
Trigger: TGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGA...CCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACACCAAGGGCTTCATATaGAACATTGAGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHTKGFI*NIESWY
Trigger: GTACCAGGACTCAATGTTTCATATGAAGCCCTTGGT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTAAATAACACTCCCAGTTaGAAGGAAGGGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLNNTPS*KEGAAS
Trigger: GCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATT...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGTGCTGTACCAGTTTCTaGGGCTGTTCCCTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRCCTSF*GCSLSG
Trigger: TCCACTAAGGGAACAGCCTCAGAAACTGGTACAGCA...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCTGTGTTCTCTCTCCATaGTCTCATCTCACCCATTGC +
Preference number: 4 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSCVLSP*SHLTHC
Trigger: GCAATGGGTGAGATGAGATCATGGAGAGAGAACACA...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCTCACTGTTCTCCTaGTCATTGGTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRPTRTHQKGSTALEEVHSSLFS*SLVSVS
Trigger: GGACACAGAGACCAATGAGCAGGAGAACAGTGAGGA...ATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPSVTWR*TRTPWA
Trigger: TGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGA...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GGGAAAACATCAGCTCTCCCAGATCCACGTTGTCTGCTGTCAGAGTCAGGTAATGTTTCCCACAAGCCTTaGTGTTACTCCGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: GKTSALPDPRCLLSESGNVSHKP*CYSVSR
Trigger: ACGGGAGACGGAGTAACAGCAAGGCTTGTGGGAAAC...ATTACCTGACTCTGACAGCAGACAACGTGGATCTGGGAGAGCTGATGTTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCTCTTCTTCAGTCGTCTaGCATCACACATCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSSSSVV*HHTSAR
Trigger: TCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGA...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGTCACCTTGGGCCACCTaGAGAAGGTGGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: TKGQPNRMQENRGRVANGSPWAT*RRWLDH
Trigger: ATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGA...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCAATGACTCTGGGCTGTTaGATATGGAAATACCCCAGA +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLAMTLGC*IWKYPR
Trigger: TCTGGGGTATTTCCATATGCAACAGCCCAGAGTCAT...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTCTATTGGAGCCAGTCTaGTTTCTCTGGGACCATTCT +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSLLEPV*FLWDHS
Trigger: AGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAG...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTGTGGATAGTACTCTTTaGCTGCTTGCCCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSVDSTL*LLAPTK
Trigger: CTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCAC...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGTTCTACATCCTGGTaGCTCACTGTCACTGCACGC +
Preference number: 4 (lower is better)
Translates to: LREYVLAALFYILVPHCHCSTSW*LTVTAR
Trigger: GCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACA...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATCCGGGCCGACGAGGTTaGCTCTGTGACTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ERIFHNAHATEMYALLTNPGRRG*LCDLAL
Trigger: CAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGG...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTAAAGGATGCACTCCCTaGGGAAATCAGCCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVKGCTP*GNQPSL
Trigger: TAGACTTGGCTGATTTCCCCAGGGAGTGCATCCTTT...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSQPASR*KIAQGK
Trigger: TTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTG...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCATTCCAGTCCTCTTACCCATaGTCATCGTTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: AQGYDSGLLHMEIPQKAFQSSYP*SSFLHQ
Trigger: CTGGTGGAGAAACGATGACCATGGGTAAGAGGACTG...GAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTATTGGTTGGCAGACTTaGTCAGGAAGGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSIGWQT*SGRKLS
Trigger: ACTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAAT...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCACTCTTTGAATCCCAGTaGTTGGAAGCCAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLALFESQ*LEANQR
Trigger: TCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAG...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACAGGCAGAGTTGCAAATaGGCTGAGGGAGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHRQSCK*AEGVQI
Trigger: AATTTGAACTCCCTCAGCCCATTTGCAACTCTGCCT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCACGCTGCCATTGTTCTACATCCTaGTGCCTCACTGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: MFWQHCSTSWCLTVTARCHCSTS*CLTVTA
Trigger: TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATG...GCAGCGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 72 bp CTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTaGCATATGGAAATACCCCAGAAGGCATTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCVVAQGYDSGL*HMEIPQKAFRP
Trigger: TGGCCTGAATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp GCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATaGCCAAGGACATGTCAGAATTTATTGGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: AQLPQDLQPRLP*PRTCQNLLGLL
Trigger: CAGCAATCCCAATAAATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCCACGGTCATAGTCCATaGCTGCTATGGACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGHGHSP*LLWTSG
Trigger: TCCACTTGTCCATAGCAGTCATGGACTATGACCGTG...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCCTTGACACACGCCGATaGTCTCATTGTGACCTACAC +
Preference number: 4 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGLDTRR*SHCDLH
Trigger: GTGTAGGTCACAATGAGATCATCGGCGTGTGTCAAG...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCGGGCTTCCGAGGATATaGCAACATTTCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGGLPRI*QHFTPV
Trigger: CACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGCAATGCTCATGCCACTaGGATGTATGCCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRQCSCH*DVCPSN
Trigger: GTTAGAAGGGCATACATCTCAGTGGCATGAGCATTG...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATGTATGTGTCTGAAGTaGGAAGGAAACCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLACMCLK*EGNLYV
Trigger: CACATAGAGGTTTCCTTCTCACTTCAGACACATACA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTAAGCTGAGTAATGAATaGGATGCCTGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGAKLSNE*DAWGGP
Trigger: GGGCCCTCCCCAGGCATCTCATTCATTACTCAGCTT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTCTGAATGAGGAGGGATaGGCAGAGGGGAACCTTGAG +
Preference number: 4 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPLNEEG*AEGNLE
Trigger: CTCAAGGTTCCCCTCTGCTCATCCCTCCTCATTCAG...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTGGAGGATGTCTGAATaGGGAGGGATGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPWRMSE*GGMSRG
Trigger: CCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGGAAAACATCAGCTCTCCCAGATCCACGTTGTCTGCTGTCAGAGTCAGGTAATAGGGAGCACAGCCCTTaGAGAAGTTCATTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GKTSALPDPRCLLSESGNREHSP*RSSFPN
Trigger: GTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCT...ATTACCTGACTCTGACAGCAGACAACGTGGATCTGGGAGAGCTGATGTTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTTCCTCACTGTTCTCCTaGTCATTGGTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSSSLFS*SLVSVS
Trigger: GGACACAGAGACCAATGAGCAGGAGAACAGTGAGGA...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTGCCTCTCAGCCTCGTTaGCTACTTGACACACGCCGA +
Preference number: 4 (lower is better)
Translates to: KKGAQPLKKFIPKPQGICASQPR*LLDTRR
Trigger: TCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGGC...ACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTAGAGACATGCTTCCCTaGAGCACATCACCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGARDMLP*STSPWA
Trigger: GGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTTAGTGGACGAATGTaGCTAGGAAAGGATATTCCA +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHLSGRM*LGKDIP
Trigger: TGGAATATCCTTTCCTAGGCACATTCGTCCACTAAG...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCGTGGATGGGGTGCCTTaGACCTATAATGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCVDGVP*TYNGTE
Trigger: CTCTGTCCCATTATAGGTGCAAGGCACCCCATCCAC...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR GCA 90 bp TGGTTTCATTTACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCAAATGTGTGGATGGGGTaGCTTGCACCTATAATGGGA +
Preference number: 4 (lower is better)
Translates to: WFHLRGGRSNEDEAHSWPNVWMG*LAPIMG
Trigger: TCCCATTATAGGTGCAAGGCACCCCATCCACACATT...TGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTAAATGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGAATGTGTGGATGGGGTaGCTTGCACCTATAATGGGA +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRNVWMG*LAPIMG
Trigger: TCCCATTATAGGTGCAAGGCACCCCATCCACACATT...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCAAGGACAGATAACACCTaGTGTCTCTTAGGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: GNMFWQHCSTSWCLTVTARTDNT*CLLGAS
Trigger: GCTAGCCCCTAAGAGACAGCAGGTGTTATCTGTCCT...TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCACGCTGCTCTCTCCTTaGAGCTGGAAACCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCTLLSP*SWKPFF
Trigger: GAAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGT...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATACTGTCACTGCACGCTaGTCTCTCCTTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDTVTAR*SLLAAG
Trigger: TCCAGCTGCAAGGAGAGAGCAGCGTGCAGTGACAGT...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGATCCCCGTCTGGGTaGAGAGGGGAATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQGSPSG*RGECQG
Trigger: CCCCTGACATTCCCCTCTCCACCCAGACGGGGATCC...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGAAACCTCTATGTGTGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAAGGATGCACTCCCTaGGGAAATCAGCCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: GNLYVWLPKAMTLGCCIWKGCTP*GNQPSL
Trigger: TAGACTTGGCTGATTTCCCCAGGGAGTGCATCCTTT...CCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CCA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACACTGCTATGGACAAGTaGATTTGGTCAATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LGSWHERHASLQHITLGHTAMDK*IWSMFS
Trigger: CGAGAACATTGACCAAATCCACTTGTCCATAGCAGT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGCCTGCAGAAGGTGGCTaGACCATTCAGGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWPAEGG*TIQVHQ
Trigger: TTGGTGAACCTGAATGGTCCAGCCACCTTCTGCAGG...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTTATTCCTTGCAAATCTaGAGCACTTCTTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSYSLQI*STSWGT
Trigger: TGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATA...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCATTTCCATCCCCAAGTaGTGTGAAAGTGATGTATGT +
Preference number: 4 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCISIPK*CESDVC
Trigger: ACATACATCACTTTCACACCACTTGGGGATGGAAAT...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAGTATCCCAAGGCTGCTaGCTCTCTGGGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGVSQGC*LSGQEA
Trigger: AGCTTCCTGCCCAGAGAGCCAGCAGCCTTGGGATAC...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATCTCTCTCCTTGCAGCTaGAAACCCTTCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDLSPCS*KPFFLP
Trigger: GGGGAGGAAGAAGGGTTTCCAGCTGCAAGGAGAGAG...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 72 bp TCATTCCCAAACCTCAGGGAATATGTTCTGGCAGCATaGTTCTACATCCTGGTGCCTCACTGTCACTGCACG +
Preference number: 4 (lower is better)
Translates to: SFPNLREYVLAA*FYILVPHCHCT
Trigger: CGTGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 72 bp GGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTaGAAGAAGTTCATTCCCAAACCTCAGGGAATATGT +
Preference number: 4 (lower is better)
Translates to: GPLGPIKKGAQP*KKFIPKPQGIC
Trigger: ACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCCGAGACCACAGGCAGTaGCCACAAGGGTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFRDHRQ*PQGSAG
Trigger: GCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCG...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTTGGCCGATTAAGTCATaGCGAGAGAACCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSWPIKS*RENLSK
Trigger: CTTTGACAGGTTCTCTCGTCATGACTTAATCGGCCA...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAGCCTCGTTGCCTACTTaGCACACGCCGATGATCTCA +
Preference number: 4 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQASLPT*HTPMIS
Trigger: TGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGC...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCCAATGCTCATGCCACTaGGATGTATGCCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICQCSCH*DVCPSN
Trigger: GTTAGAAGGGCATACATCTCAGTGGCATGAGCATTG...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAACTGAATGAGGAGGGATaGGCAGAGGGGAACCTTGAG +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLELNEEG*AEGNLE
Trigger: CTCAAGGTTCCCCTCTGCTCATCCCTCCTCATTCAG...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCTGGAGGATGTCTGAATaGGGAGGGATGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAWRMSE*GGMSRG
Trigger: CCCTCTGCTCATCCCTCCTCATTCAGACATCCTCCA...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCATTGGGATTGCTGCCTaGTATCTATTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICIGIAA*YLLEPV
Trigger: GACTGGCTCCAATAGATATCAGGCAGCAATCCCAAT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACGAAGTGAAGCTTCCGTaGTTCAAGGTCATTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LGILLGLFLANLEHFLGHEVKLP*FKVIVG
Trigger: CCCTACAATGACCTTGAAGCACGGAAGCTTCACTTC...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAGAAGTGAAGCTTCCGTaGTTCAAGGTCATTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGEVKLP*FKVIVG
Trigger: CCCTACAATGACCTTGAAGCACGGAAGCTTCACTTC...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGATATCCTTCCAAAGGATaGACTCCCTGGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGYPSKG*TPWGNQ
Trigger: CTGATTTCCCCAGGGAGTGCATCCTTTGGAAGGATA...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTGCCTCTCAGCCTCGTTaGCTACTTGACACACGCCGA +
Preference number: 4 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPASQPR*LLDTRR
Trigger: TCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGGC...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCAGGGAATGCCAGTGTaGAATGGGCTTCCGAGGATA +
Preference number: 4 (lower is better)
Translates to: TGFKVFLLVDVFLFFSRLQGMPV*NGLPRI
Trigger: TATCCTCGGAAGCCCATTGCACACTGGCATTCCCTG...CAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR GCA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTAAATCGTCTGGATGTTaGTGGATGGAAAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: RWGTVGTAASGSPTQASIKSSGC*WMEKVT
Trigger: AGTAACTTTTTCCATCCAGCAACATCCAGACGATTT...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTCTTGGGGCTATTCCTTaGAAATCTGGAGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPLGAIP*KSGALL
Trigger: AAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAG...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGGTTGCCCAAGGCTATGACTCTGGGCTGTTGCATATGGAAATACCCCAGAAGGTTCCAGGGAACAGCCTaGTTGTCTTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: WLPKAMTLGCCIWKYPRRFQGTA*LSWYSL
Trigger: AAGAGAATACCAAGACAAGCAGGCTGTTCCCTGGAA...CCTTCTGGGGTATTTCCATATGCAACAGCCCAGAGTCATAGCCTTGGGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTATGACTCTGGGCTGTTaGATATGGAAATACCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPMTLGC*IWKYPR
Trigger: TCTGGGGTATTTCCATATGCAACAGCCCAGAGTCAT...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTGGGCACAGTTCTCCTaGATCCCCGTCTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ERIFHNAHATEMYALLTNWAQFS*IPVWVE
Trigger: CTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCA...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATGCACGCGGACGCCATaGGCACAGTTCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQCTRTP*AQFSWI
Trigger: GATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCCAGTCCTCTTACCCATaGTCATCGTTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCQSSYP*SSFLHQ
Trigger: CTGGTGGAGAAACGATGACCATGGGTAAGAGGACTG...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQATCRR*LDHSGS
Trigger: TGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGC...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTGCCACCTGCAGAAGGTaGCTGGACCATTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAATCRR*LDHSGS
Trigger: TGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGC...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTACGCATAGCTGGCCATTaGTTGGCAGACTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVRIAGH*LADLVR
Trigger: CCTGACCAAGTCTGCCAACCAATGGCCAGCTATGCG...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTGATGAGGCGCATAGCTaGCCATTGGTTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGADEAHS*PLVGRL
Trigger: AAGTCTGCCAACCAATGGCCAGCTATGCGCCTCATC...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGCTGGGACCATTCTTCTaGGCTCATCTGCCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWLGPFF*AHLPSF
Trigger: AAAGCTAGGCAGATGAGCCCAGAAGAATGGTCCCAG...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTACTGCCTGATATCTATTaGAGCCAGTCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLLPDIY*SQSAFS
Trigger: AGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAG...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTAGGCAGAGTTGCAAATaGGCTGAGGGAGTTCAAATT +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPRQSCK*AEGVQI
Trigger: AATTTGAACTCCCTCAGCCCATTTGCAACTCTGCCT...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp CACCTGCCTGCCATGTGGATAGTACTCTTTGCCTGCTaGCCCCTACAAAGCCACCTTCTATTTCATACCAAT +
Preference number: 4 (lower is better)
Translates to: HLPAMWIVLFAC*PLQSHLLFHTN
Trigger: ATTGGTATGAAATAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTGAGTTGTCTTCGGATTaGATTATGCCGGGCCGACGA +
Preference number: 4 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAELSSD*IMPGRR
Trigger: TCGTCGGCCCGGCATAATTCAATCCGAAGACAACTC...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCGAAGCTGCTGGATATTaGAGTCCGGGTTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCEAAGY*SPGLTS
Trigger: ACTTGTCAAACCCGGACTTCAATATCCAGCAGCTTC...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTGAAGCAAATAGATCTTaGCATAAGGATCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVEANRS*HKDLKS
Trigger: GGACTTCAGATCCTTATGTCAAGATCTATTTGCTTC...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTCTTGGTTCTTGGCATaGGAGACATGCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGASWFLA*ETCFPA
Trigger: TGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGGCAGTGAATTTGCTGTaGACTAGCCCTCCTTGCATT +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWAVNLL*TSPPCI
Trigger: AATGCAAGGAGGGCTAGTTCACAGCAAATTCACTGC...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCCATGGGAGGAGGCAGTaGATTTGCTGTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAHGRRQ*ICCELA
Trigger: GGCTAGTTCACAGCAAATTCACTGCCTCCTCCCATG...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTCTGCTAGCTACTGAGTaGGTAGTGTTGGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTLLATE*VVLGVS
Trigger: AGAGACCCCCAACACTACTCACTCAGTAGCTAGCAG...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGGTTTCATTTACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATGTATGTGTCTGAAGTaGGAAGGAAACCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: WFHLRGGRSNEDEAHSWPCMCLK*EGNLYV
Trigger: CACATAGAGGTTTCCTTCTCACTTCAGACACATACA...TGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTAAATGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGCCTCCACTGGATCATTaGAGAAAAGTCGGTCACGAC +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRPPLDH*RKVGHD
Trigger: GTCGTGACCGACTTTTCTTCAATGATCCAGTGGAGG...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTCCTCACTGTTCTCCTaGTCATTGGTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPSSLFS*SLVSVS
Trigger: GGACACAGAGACCAATGAGCAGGAGAACAGTGAGGA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GATAGCACAGGGAAAACATCAGCTCTCCCAGATCCACGTTGTCTGCTGTCAGAGGTCATAGTCCATGACTaGTATGGACAAGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: DSTGKTSALPDPRCLLSEVIVHD*YGQVDL
Trigger: CAAATCCACTTGTCCATAGCAGTCATGGACTATGAC...CTCTGACAGCAGACAACGTGGATCTGGGAGAGCTGATGTTTTCCCTGTGCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGGATTTCCAGGGCAGATaGTATGTCCTCATCACCAAG +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWDFQGR*YVLITK
Trigger: CTTGGTGATGAGGACATAGCATCTGCCCTGGAAATC...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTGTACTCTCTACCACGTaGATGGGAGGAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTVLSTT*MGGGSE
Trigger: TTCACTGCCTCCTCCCATGCACGTGGTAGAGAGTAC...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTATTAGTATCCCAAGGCTaGTGGCTCTCTGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVLVSQG*WLSGQE
Trigger: TTCCTGCCCAGAGAGCCAGCAGCCTTGGGATACTAA...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGTTAGTATCCCAAGGCTaGTGGCTCTCTGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKLVSQG*WLSGQE
Trigger: TTCCTGCCCAGAGAGCCAGCAGCCTTGGGATACTAA...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGTACTCTTTGCCTGCTTaGCCCTACAAAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: TKGQPNRMQENRGRVANGYSLPA*PYKATF
Trigger: GAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTA...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AAGAAAAGTCGGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGCTACAGTTAATAGAATaGCAGGTTCCATTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KKSRSRPAQRPTRTHQKGLQLIE*QVPFST
Trigger: TGTGCTGAATGGAACCTGGCATTCTATTAACTGTAG...CCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTCAGCCTGCCAGCCGTTaGAAGATAGCACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTQPASR*KIAQGK
Trigger: TTTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTG...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TATTTTGTCCTTGGCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCATGGACAAGTGGATTTaGTCAATGTTCTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YFVLGTSSPLTHGHRFSTMDKWI*SMFSGG
Trigger: CCCTCCCGAGAACATTGACCAAATCCACTTGTCCAT...GGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CCA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACTCACCAAACCCAATCTaGAAAGAAGGCCAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LGILLGLFLANLEHFLGHSPNPI*KEGQLV
Trigger: CACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGA...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAAGATGAGGCGCATAGCTaGCCATTGGTTGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLEDEAHS*PLVGRL
Trigger: AAGTCTGCCAACCAATGGCCAGCTATGCGCCTCATC...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTAAGTGGTGCAAATGTGTaGATGGGGTGCCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVSGANV*MGCLAP
Trigger: AGGTGCAAGGCACCCCATCCACACATTTGCACCACT...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCTTGAATCCCAGTGGTTaGAAGCCAATCAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICLNPSG*KPIREV
Trigger: CACTTCTCTGATTGGCTTCCAACCACTGGGATTCAA...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCCTCTTTGAATCCCAGTaGTTGGAAGCCAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICLFESQ*LEANQR
Trigger: TCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAG...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAAGGAAGCTTCTGAGGTaGGGAACAGTAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGRKLLR*GTVGTA
Trigger: AGCTGTGCCTACTGTTCCCCACCTCAGAAGCTTCCT...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGACACCAGAGAGTGCAGCAAGTATGCAGAGAAAACCTGGGCACCAAGAGACCTGCTCTAAAGAAAATGTaGTACGGAGGACAGATAACA +
Preference number: 4 (lower is better)
Translates to: GHQRVQQVCRENLGTKRPALKKM*YGGQIT
Trigger: TGTTATCTGTCCTCCGTACCACATTTTCTTTAGAGC...AGGTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTGAAGCAAATAGATCTTaGCATAAGGATCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPEANRS*HKDLKS
Trigger: GGACTTCAGATCCTTATGTCAAGATCTATTTGCTTC...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCCACGGTCATAGTCCATaGCTGCTATGGACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAHGHSP*LLWTSG
Trigger: TCCACTTGTCCATAGCAGTCATGGACTATGACCGTG...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAGGGCTTCCGAGGATATaGCAACATTTCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGGLPRI*QHFTPV
Trigger: CACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTAAAGGTAGTCATGTGTaGATTGAGATCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSKGSHV*IEICCL
Trigger: TAGGCAGCAGATCTCAATTCACACATGACTACCTTT...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAAAATAACACTCCCAGTTaGAAGGAAGGGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLENNTPS*KEGAAS
Trigger: GCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATT...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAAGGCAGCTGGGGCAATaGGAACTTTCTGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGRQLGQ*ELSEDV
Trigger: TACGTCTTCAGAAAGTTCTCATTGCCCCAGCTGCCT...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCCATTCTTTCCCAAATTaGAGTCTCAGGCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCHSFPN*SLRQED
Trigger: ATCCTCCTGCCTGAGACTTCAATTTGGGAAAGAATG...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTATCCTTCCAAAGGATaGACTCCCTGGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPYPSKG*TPWGNQ
Trigger: CTGATTTCCCCAGGGAGTGCATCCTTTGGAAGGATA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp ACAAGTGGATTTGGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTCTTCTTCAGTCGTCTaGCATCACACATCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: TSGFGQCSREGHQRLWLRSSSVV*HHTSAR
Trigger: TCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGA...ACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR GCA 90 bp GTGGCTGGACCATTCAGGTTCACCAAACCCAATCTGGAAAGAAGGCCAGTTAGTGTCATAGTCCATGACTaGTATGGACAAGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: VAGPFRFTKPNLERRPVSVIVHD*YGQVDL
Trigger: CAAATCCACTTGTCCATAGCAGTCATGGACTATGAC...ACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGAACCTGAATGGTCCAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCAGGGAATGCCAGTGTaGAATGGGCTTCCGAGGATA +
Preference number: 4 (lower is better)
Translates to: RSSFPNLREYVLAALFYIQGMPV*NGLPRI
Trigger: TATCCTCGGAAGCCCATTGCACACTGGCATTCCCTG...GATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATGTGGATAGTACTCTTTaGCTGCTTGCCCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDVDSTL*LLAPTK
Trigger: CTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCAC...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR GCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTACAAAGCCACCTGCCTaGCATGTGGATAGTACTCTT +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGATKPPA*HVDSTL
Trigger: AAGAGTACTATCCACATGGCAGGCAGGTGGCTTTGT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTAGAGTGCAGCAAGTATaGAGAGAAAACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KKGAQPLKKFIPKPQGICRVQQV*RENLGT
Trigger: GGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCT...ACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp AAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTCAGGACACCAGAGAGTaGAGCAAGTATGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: KGAQPLKKFIPKPQGICSQDTRE*SKYAEK
Trigger: TTTCTCTGCATACTTGCTGCACTCTCTGGTGTCCTG...AGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGATGGACAAGTGGATTTaGTCAATGTTCTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRMDKWI*SMFSGG
Trigger: CCCTCCCGAGAACATTGACCAAATCCACTTGTCCAT...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR CCA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAACTGCTATGGACAAGTaGATTTGGTCAATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGTAMDK*IWSMFS
Trigger: CGAGAACATTGACCAAATCCACTTGTCCATAGCAGT...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTGGCCAGTTAGTGCTGTaGTTACAGCTGAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTGQLVL*LQLSIW
Trigger: CCAAATGCTCAGCTGTAACCACAGCACTAACTGGCC...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTGAGTCCTGGTACTCTTaGTACTGTCACTATATCTAT +
Preference number: 4 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPESWYS*YCHYIY
Trigger: ATAGATATAGTGACAGTACCAAGAGTACCAGGACTC...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGACAGCCTGCTTGTCTTaGTATTCTCTTGGGGCTATT +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLTACLS*YSLGAI
Trigger: AATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTATCTCTACCACGTGCATaGGAGGAGGCAGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVSLPRA*EEAVNL
Trigger: CAAATTCACTGCCTCCTCCCATGCACGTGGTAGAGA...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGACTGGGCTGTTGCATATaGAAATACCCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRLGCCI*KYPRRH
Trigger: ATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAG...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGGGAAACCTCTATGTGTaGTTGCCCAAGGCTATGACT +
Preference number: 4 (lower is better)
Translates to: TKGQPNRMQENRGRVANGGNLYV*LPKAMT
Trigger: AGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTTGCTCACAGCTGTACTaGCTAGGCAAAGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLACSQLY*LGKAFQ
Trigger: CTGGAAAGCTTTGCCTAGCCAGTACAGCTGTGAGCA...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp AGCCTGCTTGTCTTGGTATTCTCTTGGGGCTATTCCTaGCAAATCTGGAGCACTTCTTGGGGCACAGTTATT +
Preference number: 4 (lower is better)
Translates to: SLLVLVFSWGYS*QIWSTSWGTVI
Trigger: AATAACTGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACAAGCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCCCCGCAGGTGGTAAATaGAATCCTGGCAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFPAGGK*NPGSCR
Trigger: ACGACAGCTGCCAGGATTTCATTTACCACCTGCGGG...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ACAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCCGGGTTTGACAAGTTaGGTTGTCTTCGGATTGAAT +
Preference number: 4 (lower is better)
Translates to: TGFKVFLLVDVFLFFSRLPGLTS*VVFGLN
Trigger: ATTCAATCCGAAGACAACTCAACTTGTCAAACCCGG...CAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATATTGAAGTCCGGGTTTaGCAAGTTGAGTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDIEVRV*QVELSS
Trigger: CGAAGACAACTCAACTTGTCAAACCCGGACTTCAAT...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGAAGCTGCTGGATATTaGAGTCCGGGTTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAEAAGY*SPGLTS
Trigger: ACTTGTCAAACCCGGACTTCAATATCCAGCAGCTTC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp ACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAAATTGACAGCTTTGTaGATCTTCACTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: THQKGSTALEEVHSQTSGKLTAL*IFTMSC
Trigger: GCAGCTCATAGTGAAGATTCACAAAGCTGTCAATTT...CCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGAAAGGTAGTCATGTGTaGATTGAGATCTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWKGSHV*IEICCL
Trigger: TAGGCAGCAGATCTCAATTCACACATGACTACCTTT...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGAAAACAGGGCCATGTTaGTACTGGTACTCTCTACCA +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRKTGPC*YWYSLP
Trigger: TGGTAGAGAGTACCAGTATCAACATGGCCCTGTTTT...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR TCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTAGTGTTGGGGGTCTCTaGTTCCTCAAAATCTGGTTT +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGASVGGL*FLKIWF
Trigger: AAACCAGATTTTGAGGAATCAGAGACCCCCAACACT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCTGTGTTCTCTCTCCATaGTCTCATCTCACCCATTGC +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGACVLSP*SHLTHC
Trigger: GCAATGGGTGAGATGAGATCATGGAGAGAGAACACA...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAACCTCCCAGGATATGCTaGGGCCTTTGGTTTCATTTA +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLEPPRIC*GLWFHL
Trigger: TAAATGAAACCAAAGGCCTCAGCATATCCTGGGAGG...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTCCTCCCAGGATATGCTaGGGCCTTTGGTTTCATTTA +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTPPRIC*GLWFHL
Trigger: TAAATGAAACCAAAGGCCTCAGCATATCCTGGGAGG...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp AAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTTATCTCTGCCTCCTTTaGAAGCTAAATCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGAQPLKKFIPKPQGICSYLCLL*KLNLPP
Trigger: TGGAGGGAGATTTAGCTTTCAAAGGAGGCAGAGATA...AGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGTTTCCCACAAGCCTTaGTGTTACTCCGTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQVSHKP*CYSVSR
Trigger: ACGGGAGACGGAGTAACAGCAAGGCTTGTGGGAAAC...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp AAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTTCTTCAGTCGTCTaGCATCACACATCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: KKGAQPLKKFIPKPQGICSSSVV*HHTSAR
Trigger: TCTCGCTGATGTGTGATGGCAGACGACTGAAGAAGA...ACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATTCTCCACCAGGGAATaGCAGTGTGCAATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQFSTRE*QCAMGF
Trigger: GAAGCCCATTGCACACTGGCATTCCCTGGTGGAGAA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGGATTTCCAGGGCAGATaGTATGTCCTCATCACCAAG +
Preference number: 4 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKDFQGR*YVLITK
Trigger: CTTGGTGATGAGGACATAGCATCTGCCCTGGAAATC...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGTTCCAGGGAACAGCCTaGTTGTCTTGGTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRFQGTA*LSWYSL
Trigger: AAGAGAATACCAAGACAAGCAGGCTGTTCCCTGGAA...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR GCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCTATTGGAGCCAGTCTaGTTTCTCTGGGACCATTCT +
Preference number: 4 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLALLEPV*FLWDHS
Trigger: AGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAG...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCATTTATTGGGATTGCTaGCTGATATCTATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICIYWDC*LISIGA
Trigger: GGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGCACTGCTATGGACAAGTaGATTTGGTCAATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QDSRCSSWWMFSSSSVVCTAMDK*IWSMFS
Trigger: CGAGAACATTGACCAAATCCACTTGTCCATAGCAGT...GCAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR CCA 90 bp CCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTACTGGATGTTGCTGGATaGAAAAAGTTACTTAAGATC +
Preference number: 4 (lower is better)
Translates to: PAMWIVLFACLPLQSHLLLDVAG*KKLLKI
Trigger: GATCTTAAGTAACTTTTTCCATCCAGCAACATCCAG...TAGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGATCTGGAGCACTTCTTaGGGCACAGTTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRIWSTS*GTVIFW
Trigger: CCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTATTCCTTGCAAATCTaGAGCACTTCTTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGAYSLQI*STSWGT
Trigger: TGTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGACAGCCTGCTTGTCTTaGTATTCTCTTGGGGCTATT +
Preference number: 4 (lower is better)
Translates to: TKGQPNRMQENRGRVANGTACLS*YSLGAI
Trigger: AATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGT...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCCTTTCTATAGGGGATaGCTGTGTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAPFYRG*LCSLSM
Trigger: CATGGAGAGAGAACACAGCCATCCCCTATAGAAAGG...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAACTGGGCTGTTGCATATaGAAATACCCCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GFSLNPSGWKPIREVKLELGCCI*KYPRRH
Trigger: ATGCCTTCTGGGGTATTTCCATATGCAACAGCCCAG...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGGGAAACCTCTATGTGTaGTTGCCCAAGGCTATGACT +
Preference number: 4 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKGNLYV*LPKAMT
Trigger: AGTCATAGCCTTGGGCAACCACACATAGAGGTTTCC...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAACCAGTCTGCTTTCTCTaGGACCATTCTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQPVCFL*DHSSGL
Trigger: GAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGG...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCGGGTTTGACAAGTTaGGTTGTCTTCGGATTGAAT +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGPGLTS*VVFGLN
Trigger: ATTCAATCCGAAGACAACTCAACTTGTCAAACCCGG...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTGTGAATCTTCACTATaGGCTGCTCTAAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPCESSL*AALSHS
Trigger: ACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp ACAAGTGGATTTGGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTGAATCTTCACTATaGGCTGCTCTAAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: TSGFGQCSREGHQRLWLRCESSL*AALSHS
Trigger: ACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACA...ACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR TCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCTTCATATGAAACATTaGGTCCTGGTACTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLLHMKH*VLVLLV
Trigger: TACCAAGAGTACCAGGACTCAATGTTTCATATGAAG...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TATTTTGTCCTTGGCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGCCAATCAGAGAAGTaGAGCTTGAATGTAATGACA +
Preference number: 4 (lower is better)
Translates to: YFVLGTSSPLTHGHRFSTSQSEK*SLNVMT
Trigger: TGTCATTACATTCAAGCTTCACTTCTCTGATTGGCT...GGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGCCAAGGACAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR GCA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACATCTTCACTATGAGCTaGTCTAAGTCACAGTCATAT +
Preference number: 4 (lower is better)
Translates to: LREYVLAALFYILVPHCHIFTMS*SKSQSY
Trigger: ATATGACTGTGACTTAGAGCAGCTCATAGTGAAGAT...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCCAGGGAATGCCAGTGTaGAATGGGCTTCCGAGGATA +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFQGMPV*NGLPRI
Trigger: TATCCTCGGAAGCCCATTGCACACTGGCATTCCCTG...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCAAATCGTCTGGATGTTaGTGGATGGAAAAAGTTACT +
Preference number: 4 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICKSSGC*WMEKVT
Trigger: AGTAACTTTTTCCATCCAGCAACATCCAGACGATTT...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAACCCAGGCTTCCATTaGCAAGGACATGTCAGAATT +
Preference number: 4 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQNPGFH*QGHVRI
Trigger: AATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTT...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTTTTATAACCAGCCTCTaGTCACAGCTGTACTGGCTA +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTFITSL*SQLYWL
Trigger: TAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAA...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCTTAAGCAAAATACATTaGAGCCTCCACTGGATCATT +
Preference number: 4 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGLSKIH*SLHWII
Trigger: AATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAA...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTTCAAGGTGTTCCTCTTaGTGGATGTTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGASRCSS*WMFSSS
Trigger: AGAAGAGGAAAACATCCACCAAGAGGAACACCTTGA...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGATCAAGGTGTTCCTCTTaGTGGATGTTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRSRCSS*WMFSSS
Trigger: AGAAGAGGAAAACATCCACCAAGAGGAACACCTTGA...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGTCCTATTTTGTCCTTaGCACAAGCAGTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAVLFCP*HKQSSY
Trigger: GTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGAC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TCTGCTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGGGCACAGTTATTTTCTaGAGACAGTCATTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SANYPGGASPSCFASKHWGTVIF*RQSLAQ
Trigger: TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCC...CCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGGGCACAGTTATTTTCTaGAGACAGTCATTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLGTVIF*RQSLAQ
Trigger: TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCC...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATCTCTACCACGTGCATaGGAGGAGGCAGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQSLPRA*EEAVNL
Trigger: CAAATTCACTGCCTCCTCCCATGCACGTGGTAGAGA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCATAGTACTAGGCAGCTaGGGCAATGAGAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAIVLGS*GNENFL
Trigger: CAGAAAGTTCTCATTGCCCCAGCTGCCTAGTACTAT...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCTTGAATCCCAGTGGTTaGAAGCCAATCAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGALNPSG*KPIREV
Trigger: CACTTCTCTGATTGGCTTCCAACCACTGGGATTCAA...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTACTGCCTGATATCTATTaGAGCCAGTCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVLPDIY*SQSAFS
Trigger: AGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAG...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp CTTCCATTGCCAAGGACATGTCAGAATTTATTGGGATaGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPLPRTCQNLLG*LPDIYWSQSAF
Trigger: GAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCAATGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCCCACGTTGTCATTGGTaGCATATTCGATATCCTTCC +
Preference number: 4 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGPRCHW*HIRYPS
Trigger: GGAAGGATATCGAATATGTCACCAATGACAACGTGG...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCAGGCAGCTGGGGCAATaGGAACTTTCTGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFRQLGQ*ELSEDV
Trigger: TACGTCTTCAGAAAGTTCTCATTGCCCCAGCTGCCT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCCTTGGGGCTATTCCTTaGAAATCTGGAGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGLGAIP*KSGALL
Trigger: AAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAG...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTCTTAGTGGACGAATGTaGCTAGGAAAGGATATTCCA +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTLSGRM*LGKDIP
Trigger: TGGAATATCCTTTCCTAGGCACATTCGTCCACTAAG...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGATTTATTGGGATTGCTaGCTGATATCTATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRIYWDC*LISIGA
Trigger: GGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR GCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTATAGTACTCTTTGCCTaGTTGCCCCTACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLFILITLPVERKGLLATIVLFA*LPLQSH
Trigger: GTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTAT...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTACAAAGCCACCTGCCTaGCATGTGGATAGTACTCTT +
Preference number: 4 (lower is better)
Translates to: LLFILITLPVERKGLLATTKPPA*HVDSTL
Trigger: AAGAGTACTATCCACATGGCAGGCAGGTGGCTTTGT...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGTTACAGCTGAGCATTTaGTCACTGAAATCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKLQLSI*SLKSSG
Trigger: TCCAGACGATTTCAGTGACCAAATGCTCAGCTGTAA...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAGAGTCCTGGTACTCTTaGTACTGTCACTATATCTAT +
Preference number: 4 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRESWYS*YCHYIY
Trigger: ATAGATATAGTGACAGTACCAAGAGTACCAGGACTC...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGGTCTTGGTATTCTCTTaGGGCTATTCCTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKVLVFS*GYSLQI
Trigger: GATTTGCAAGGAATAGCCCCAAGAGAATACCAAGAC...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GCTCATCTGCCTAGCTTTACAGACAATATTTCTGCTAACTATCCTGGTGGCGCTATTTCCATCCCCAAGTaGTGTGAAAGTGATGTATGT +
Preference number: 4 (lower is better)
Translates to: AHLPSFTDNISANYPGGAISIPK*CESDVC
Trigger: ACATACATCACTTTCACACCACTTGGGGATGGAAAT...AGCGCCACCAGGATAGTTAGCAGAAATATTGTCTGTAAAGCTAGGCAGATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCAGGGAATATGTTCTaGCAGCATTGTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: KKGAQPLKKFIPKPQGICSGNMF*QHCSTS
Trigger: GGATGTAGAACAATGCTGCCAGAACATATTCCCTGA...ACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 72 bp GCTATGTCCTCATCACCAAGGGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGTACTGTCACTATATCT +
Preference number: 4 (lower is better)
Translates to: AMSSSPRASYET*SPGTLGTVTIS
Trigger: AGATATAGTGACAGTACCAAGAGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGAAAATTGACAGCTTTGTaGATCTTCACTATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IYWDCCLISIGASLLSLGKLTAL*IFTMSC
Trigger: GCAGCTCATAGTGAAGATTCACAAAGCTGTCAATTT...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCCCTTGGCGGGCAAATTaGCAGCTTTGTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFPWRAN*QLCESS
Trigger: TGAAGATTCACAAAGCTGTCAATTTGCCCGCCAAGG...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAAGTGTTGGGGGTCTCTaGTTCCTCAAAATCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQSVGGL*FLKIWF
Trigger: AAACCAGATTTTGAGGAATCAGAGACCCCCAACACT...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTGCAATGAGAACTTTCTaGAGACGTATAACGATCCTT +
Preference number: 4 (lower is better)
Translates to: DAMSSSPRASYETLSPGTAMRTF*RRITIL
Trigger: AAGGATCGTTATACGTCTTCAGAAAGTTCTCATTGC...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGCCAATCAGAGAAGTaGAGCTTGAATGTAATGACA +
Preference number: 4 (lower is better)
Translates to: CQGHVRIYWDCCLISIGASQSEK*SLNVMT
Trigger: TGTCATTACATTCAAGCTTCACTTCTCTGATTGGCT...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCATTGGGATTGCTGCCTaGTATCTATTGGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFIGIAA*YLLEPV
Trigger: GACTGGCTCCAATAGATATCAGGCAGCAATCCCAAT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ACAGGATTCAAGGTGTTCCTCTTGGTGGATGTTTTCCTCTTCTTCAGTCGTCTGGCTGTAATTACTGTCTaGGGCCAAAATTATAAACCA +
Preference number: 4 (lower is better)
Translates to: TGFKVFLLVDVFLFFSRLAVITV*GQNYKP
Trigger: TGGTTTATAATTTTGGCCTCAGACAGTAATTACAGC...CAGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR GCA 90 bp CTTAAGATCTTTGTGAGATGGTTGTCCTATTTTGTCCTTGGCACAAGCAGTCCTTCTTCTGGGCTCATCTaGCTAGCTTTACAGACAATA +
Preference number: 4 (lower is better)
Translates to: LKIFVRWLSYFVLGTSSPSSGLI*LALQTI
Trigger: TATTGTCTGTAAAGCTAGGCAGATGAGCCCAGAAGA...AGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTATGGACAAGTGGATTTaGTCAATGTTCTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIMDKWI*SMFSGG
Trigger: CCCTCCCGAGAACATTGACCAAATCCACTTGTCCAT...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGTCCTATTTTGTCCTTaGCACAAGCAGTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQVLFCP*HKQSSY
Trigger: GTAAGAGGACTGCTTGTGCCAAGGACAAAATAGGAC...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGAGAAAAATACTATCTTaGAGTAGTGGTGCAAATGTG +
Preference number: 4 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLRKILS*SSGANV
Trigger: CACATTTGCACCACTACTCCAAGATAGTATTTTTCT...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCATGTTCTCTGCATTACTaGCTTCTTCATATCATTCTT +
Preference number: 4 (lower is better)
Translates to: RTHQKGSTALEEVHSQTSCSLHY*LLHIIL
Trigger: AAGAATGATATGAAGAAGCCAGTAATGCAGAGAACA...TGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
3UTR CAA 72 bp CTATATCTATCATTTGTTTTTGTTCATAGTCCGATCTaGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LYLSFVFVHSPI*VLGMRDMLPCS
Trigger: GCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACTATGAACAAAAACAAATGATAGATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCATTGAAGTCCGGGTTTaGCAAGTTGAGTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFIEVRV*QVELSS
Trigger: CGAAGACAACTCAACTTGTCAAACCCGGACTTCAAT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR TCA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCACCAAGGGCTTCATATaGAACATTGAGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HNAHATEMYALLTNYFSFTKGFI*NIESWY
Trigger: GTACCAGGACTCAATGTTTCATATGAAGCCCTTGGT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTAGTGATGTATGTGTCTaGAGTGAGAAGGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: LLFILITLPVERKGLLATSDVCV*SEKETS
Trigger: AGAGGTTTCCTTCTCACTTCAGACACATACATCACT...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTACCTTGGATTCTCTTTaGATCCCAGTGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFTLDSL*IPVVGS
Trigger: GCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGT...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAATCTTCACTATGAGCTaGTCTAAGTCACAGTCATAT +
Preference number: 4 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQIFTMS*SKSQSY
Trigger: ATATGACTGTGACTTAGAGCAGCTCATAGTGAAGAT...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR GCA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTTTTATAACCAGCCTCTaGTCACAGCTGTACTGGCTA +
Preference number: 4 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIFITSL*SQLYWL
Trigger: TAGCCAGTACAGCTGTGAGCAGAGGCTGGTTATAAA...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGAAGATCTTTGTGAGATaGTTGTCCTATTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TKGQPNRMQENRGRVANGKIFVR*LSYFVL
Trigger: AAGGACAAAATAGGACAACCATCTCACAAAGATCTT...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATAAGATCTTTGTGAGATaGTTGTCCTATTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDKIFVR*LSYFVL
Trigger: AAGGACAAAATAGGACAACCATCTCACAAAGATCTT...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CCA 90 bp GAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAAGGTACTGGATGTTGCTGGATaGAAAAAGTTACTTAAGATC +
Preference number: 4 (lower is better)
Translates to: EHFLGHSYFLETVISSKVLDVAG*KKLLKI
Trigger: GATCTTAAGTAACTTTTTCCATCCAGCAACATCCAG...TACCTTTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTATCTGGAGCACTTCTTaGGGCACAGTTATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIIWSTS*GTVIFW
Trigger: CCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTCCTTTCTATAGGGGATaGCTGTGTTCTCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFPFYRG*LCSLSM
Trigger: CATGGAGAGAGAACACAGCCATCCCCTATAGAAAGG...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTATTGGTTGGCAGACTTaGTCAGGAAGGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFIGWQT*SGRKLS
Trigger: ACTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAAT...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCAAGGAGAAAAATACTATCTTaGAGTAGTGGTGCAAATGTG +
Preference number: 4 (lower is better)
Translates to: CSREGHQRLWLRCKQDSRRKILS*SSGANV
Trigger: CACATTTGCACCACTACTCCAAGATAGTATTTTTCT...CCTTGAATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR TCA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATCTTCATATGAAACATTaGGTCCTGGTACTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: ERIFHNAHATEMYALLTNLHMKH*VLVLLV
Trigger: TACCAAGAGTACCAGGACTCAATGTTTCATATGAAG...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR GCA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTGTCATAGTCCATGACTaGTATGGACAAGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIVIVHD*YGQVDL
Trigger: CAAATCCACTTGTCCATAGCAGTCATGGACTATGAC...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCACCAAACCCAATCTaGAAAGAAGGCCAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFSPNPI*KEGQLV
Trigger: CACTAACTGGCCTTCTTTCCAGATTGGGTTTGGTGA...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp GGATGGAAAAAGTTACTTAAGATCTTTGTGAGATGGTaGTCCTATTTTGTCCTTGGCACAAGCAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GWKKLLKIFVRW*SYFVLGTSSPL
Trigger: AAGAGGACTGCTTGTGCCAAGGACAAAATAGGACAACCATCTCACAAAGATCTTAAGTAACTTTTTCCATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
3UTR CAA 72 bp GAGACAGTCATTAGCTCAAAGGTAGTCATGTGTGAATaGAGATCTGCTGCCTATTTAGCACCTGGATATATT +
Preference number: 4 (lower is better)
Translates to: ETVISSKVVMCE*RSAAYLAPGYI
Trigger: AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTTTGAGCTAATGACTGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTGTCTTGGTATTCTCTTaGGGCTATTCCTTGCAAATC +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFVLVFS*GYSLQI
Trigger: GATTTGCAAGGAATAGCCCCAAGAGAATACCAAGAC...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR TCA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTGCAATGAGAACTTTCTaGAGACGTATAACGATCCTT +
Preference number: 4 (lower is better)
Translates to: IFHNAHATEMYALLTNYFAMRTF*RRITIL
Trigger: AAGGATCGTTATACGTCTTCAGAAAGTTCTCATTGC...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS TCA 90 bp CGTCCGCGCTCACCGCCAGGGACCTGCCGAGAAACGGTGCGAGCCTaGGCCCGAGCCCCAGACCCAGCCGGCCCGGCCTCCCACCGGTTG +
Preference number: 5 (lower is better)
Translates to: RPRSPPGTCRETVRA*ARAPDPAGPASHRL
Trigger: CAACCGGTGGGAGGCCGGGCCGGCTGGGTCTGGGGCTCGGGCTCAGGCTCGCACCGTTTCTCGGCAGGTCCCTGGCGGTGAGCGCGGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS GCA 90 bp AGCCCGAGCCCCAGACCCAGCCGGCCCGGCCTCCCACCGGTTGCATaGAGCTCTTCGCCAGCCGGTCGGTCAGGCTTTCTCTCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: SPSPRPSRPGLPPVA*SSSPAGRSGFLSLP
Trigger: CGGGAGAGAGAGAAAGCCTGACCGACCGGCTGGCGAAGAGCTGCATGCAACCGGTGGGAGGCCGGGCCGGCTGGGTCTGGGGCTCGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS TCA 90 bp CTGGGTCGCGGAGCCGGGGTCTGGCACGGTCCCGCAGGTGGTAAATaGAATCCTGGCAGCTGTCGTGCTCCAGGGCCCCACGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: LGRGAGVWHGPAGGK*NPGSCRAPGPHGHR
Trigger: TCTGTGCCCGTGGGGCCCTGGAGCACGACAGCTGCCAGGATTTCATTTACCACCTGCGGGACCGTGCCAGACCCCGGCTCCGCGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS GCA 90 bp ATCCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCACAGTTCTCCTGGATCCCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: IHVVRADEVGSVTWR*TRTPWAQFSWIPVW
Trigger: CCAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CCA 90 bp GCCGACGAGGTTGGCTCTGTGACTTGGCGCTGCACGCGGACGCCATaGGCACAGTTCTCCTGGATCCCCGTCTGGGTGGAGAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: ADEVGSVTWRCTRTP*AQFSWIPVWVERGM
Trigger: CATTCCCCTCTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318881.11
ENST00000524820.6
ENST00000532592.1
CDS CCA 90 bp TCCCAGATCCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: SQIHVVRADEVGSVT*RCTRTPWAQFSWIP
Trigger: GGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGATCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS TCA 90 bp AGCTCTCCCAGATCCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSPRSTLSGPTRLAL*LGAARGRHGHSSPG
Trigger: TCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGATCTGGGAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS GCA 90 bp ATTGAATTATGCCGGGCCGACGAGGTTGGCTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCACAGTTCTCCTGGATCCCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: IELCRADEVGSVTWR*TRTPWAQFSWIPVW
Trigger: CCAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCATAATTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS CCA 90 bp CTTCGGATTGAATTATGCCGGGCCGACGAGGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: LRIELCRADEVGSVT*RCTRTPWAQFSWIP
Trigger: GGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCATAATTCAATCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS TCA 90 bp GTTGTCTTCGGATTGAATTATGCCGGGCCGACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: VVFGLNYAGPTRLAL*LGAARGRHGHSSPG
Trigger: TCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCATAATTCAATCCGAAGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS-3UTR CAA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCGGTTGGCTCTGTGACTaGGCGCTGCACGCGGACGCC +
Preference number: 5 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSGWLCD*ALHADA
Trigger: GGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACC...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGACACCAGAGAGTGCAGCAAGTATGCAGAGAAAACCTGGGCACCAAGAGACCTGGTTGGCTCTGTGACTaGGCGCTGCACGCGGACGCC +
Preference number: 5 (lower is better)
Translates to: GHQRVQQVCRENLGTKRPGWLCD*ALHADA
Trigger: GGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACC...AGGTCTCTTGGTGCCCAGGTTTTCTCTGCATACTTGCTGCACTCTCTGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp GGCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGGGAATGCCAGGCCTGGGGAGGGCCCTaGACCTTCACTCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: GTSSPLTHGHRFSTRECQAWGGP*TFTLVG
Trigger: ACCTACAAGAGTGAAGGTCAAGGGCCCTCCCCAGGC...CTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGGCGCATAGCTGGCCATaGGTTGGCAGACTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: GTVGTAASGSPTQASIAKAHSWP*VGRLGQ
Trigger: CTGACCAAGTCTGCCAACCAATGGCCAGCTATGCGC...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCGCATAGCTGGCCATaGGTTGGCAGACTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RWGTVGTAASGSPTQASIAHSWP*VGRLGQ
Trigger: CTGACCAAGTCTGCCAACCAATGGCCAGCTATGCGC...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGCCAAGAGCCTCGTTGCCTACTaGACACACGCCGATGATCTC +
Preference number: 5 (lower is better)
Translates to: GTVGTAASGSPTQASIAKSLVAY*THADDL
Trigger: GAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGCT...CTTGGCAATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS TCA 90 bp AAGATACGAAGAGAGACACGCCAAAGAGAGCGAGACCACAGGCAGTaGCCACAAGGGTCAGCAGGCTCACTGAGATATCTGGGTCGCGGA +
Preference number: 5 (lower is better)
Translates to: KIRRETRQRERDHRQ*PQGSAGSLRYLGRG
Trigger: TCCGCGACCCAGATATCTCAGTGAGCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCGCTCTCTTTGGCGTGTCTCTCTTCGTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTGTACTCTTTGCCTGCTaGCCCCTACAAAGCCACCTT +
Preference number: 5 (lower is better)
Translates to: RWGTVGTAASGSPTQASIVLFAC*PLQSHL
Trigger: AAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTAC...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCCGGCCTCCCACCGGTaGCATGCAGCTCTTCGCCAG +
Preference number: 5 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAPASHR*HAALRQ
Trigger: CTGGCGAAGAGCTGCATGCAACCGGTGGGAGGCCGG...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CAA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCTCCTGGTTGTTGTCTTaGCTACCAGAGGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSSWLLS*LPEGRP
Trigger: AGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGGA...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTGGTTGGCTCTGTGACTaGGCGCTGCACGCGGACGCC +
Preference number: 5 (lower is better)
Translates to: DAMSSSPRASYETLSPGTGWLCD*ALHADA
Trigger: GGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACC...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGAAAAGTCGGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGTCAGCCTGCCAGCCGTaGGAAGATAGCACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: KKSRSRPAQRPTRTHQKGSACQP*EDSTGK
Trigger: TTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGA...CCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp GCAGCACATCACCTTGGGCCACCTGCAGAAGGTGGCTGGACCATTCAGGTTCACTATGGACAAGTGGATTaGGTCAATGTTCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: AAHHLGPPAEGGWTIQVHYGQVD*VNVLGR
Trigger: CCTCCCGAGAACATTGACCAAATCCACTTGTCCATA...GTGAACCTGAATGGTCCAGCCACCTTCTGCAGGTGGCCCAAGGTGATGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCACGCTGCTCTCTCCTaGCAGCTGGAAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVHAALS*QLETLL
Trigger: AAGAAGGGTTTCCAGCTGCAAGGAGAGAGCAGCGTG...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS TCA 90 bp AAGATACGAAGAGAGACACGCCAAAGAGAGCGAGACCACAGGCAGTaGCCACAAGGGTCAGCAGGCTCACTGAGATATCTCTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: KIRRETRQRERDHRQ*PQGSAGSLRYLCLL
Trigger: AAGGAGGCAGAGATATCTCAGTGAGCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTCGCTCTCTTTGGCGTGTCTCTCTTCGTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTAACAGCCTGCTTGTCTaGGTATTCTCTTGGGGCTAT +
Preference number: 5 (lower is better)
Translates to: RWGTVGTAASGSPTQASINSLLV*VFSWGY
Trigger: ATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGTT...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCAAGTTTCCCACAAGCCTaGCTGTTACTCCGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: GNMFWQHCSTSWCLTVTASFPQA*LLLRLP
Trigger: CGGGAGACGGAGTAACAGCAAGGCTTGTGGGAAACT...TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACAGCCTCGTTGCCTACTaGACACACGCCGATGATCTC +
Preference number: 5 (lower is better)
Translates to: LREYVLAALFYILVPHCHSLVAY*THADDL
Trigger: GAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGCT...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACGATGGTTGTCCTATTTaGTCCTTGGCACAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: LGSWHERHASLQHITLGHDGCPI*SLAQAV
Trigger: GACTGCTTGTGCCAAGGACAAAATAGGACAACCATC...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTGCCTGGGGAGGGCCCTaGACCTTCACTCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPAWGGP*TFTLVG
Trigger: ACCTACAAGAGTGAAGGTCAAGGGCCCTCCCCAGGC...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCATTGGTTGGCATCCGGGTTTGACAAGTaGAGTTGTCTTCGGATTGAA +
Preference number: 5 (lower is better)
Translates to: YVEAEAMRMRRIAGHWLASGFDK*SCLRIE
Trigger: TTCAATCCGAAGACAACTCAACTTGTCAAACCCGGA...TGCCAACCAATGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CAA 90 bp GGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTGCAGTCCCAGAAAAGTCCTaGGCGGGCAAATTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GNMFWQHCSTSWCLTVTAVPEKS*AGKLTA
Trigger: AGCTGTCAATTTGCCCGCCAAGGACTTTTCTGGGAC...TGCAGTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCATCTTTGTGAGATGGTaGTCCTATTTTGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCIFVRW*SYFVLG
Trigger: GCCAAGGACAAAATAGGACAACCATCTCACAAAGAT...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GCCTGCCATGTGGATAGTACTCTTTGCCTGCTTGCCCCTACAAAGCCACCTTCTGTTACAGCTGAGCATTaGGTCACTGAAATCGTCTGG +
Preference number: 5 (lower is better)
Translates to: ACHVDSTLCLLAPTKPPSVTAEH*VTEIVW
Trigger: CCAGACGATTTCAGTGACCAAATGCTCAGCTGTAAC...AGAAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTACTATCCACATGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GCACAAGCAGTCCTCTTACCCATGGTCATCGTTTCTCCACCAGGGAATGCCAGTGAAAACAGGGCCATGTaGATACTGGTACTCTCTACC +
Preference number: 5 (lower is better)
Translates to: AQAVLLPMVIVSPPGNASENRAM*ILVLST
Trigger: GGTAGAGAGTACCAGTATCAACATGGCCCTGTTTTC...ACTGGCATTCCCTGGTGGAGAAACGATGACCATGGGTAAGAGGACTGCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CAA 90 bp AGGTGGGGAACAGTAGGCACAGCTGCCTCAGGATCTCCAACCCAGGCTTCCATTCTAGCCCTTCATGTTTaGCTTCTAAACACTGGTATG +
Preference number: 5 (lower is better)
Translates to: RWGTVGTAASGSPTQASILALHV*LLNTGM
Trigger: CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAG...AATGGAAGCCTGGGTTGGAGATCCTGAGGCAGCTGTGCCTACTGTTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCCTGGTTGTTGTCTTaGCTACCAGAGGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDSWLLS*LPEGRP
Trigger: AGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGGA...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR CAA 90 bp CCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGATTAAGGGGCTCCTGGTaGTTGTCTTTGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: PIKKGAQPLKKFIPKPQGLRGSW*LSLLPE
Trigger: CTCTGGTAGCAAAGACAACAACCAGGAGCCCCTTAA...TCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp CTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACAGATCCACGTTGTCATaGGTGACATATTCGATATCC +
Preference number: 5 (lower is better)
Translates to: LGSWHERHASLQHITLGHRSTLS*VTYSIS
Trigger: GGATATCGAATATGTCACCAATGACAACGTGGATCT...GTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CAA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGTCAGCCTGCCAGCCGTaGGAAGATAGCACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: TKGQPNRMQENRGRVANGSACQP*EDSTGK
Trigger: TTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGA...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTGGGCCACCTGCCTCCTGTTATGTCCATaGCCTTTAAATTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: VLGMRDMLPCSTSPWATCLLLCP*PLNSLL
Trigger: AAGCAAGGAATTTAAAGGCAATGGACATAACAGGAG...GCAGGTGGCCCAAGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGAAAAGTCGGTCACGACCAGCACAGAGGCCCACTAGGACCCATCAAAAAGGGTTCAAGGTGTTCCTCTaGGTGGATGTTTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KKSRSRPAQRPTRTHQKGFKVFL*VDVFLF
Trigger: GAAGAGGAAAACATCCACCAAGAGGAACACCTTGAA...CCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGCTGGTCGTGACCGACTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp TGGTTTCATTTACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCAGTTCATAGTCCGATCTaGGTTCTTGGCATGAGAGAC +
Preference number: 5 (lower is better)
Translates to: WFHLRGGRSNEDEAHSWPVHSPI*VLGMRD
Trigger: GTCTCTCATGCCAAGAACCAAGATCGGACTATGAAC...TGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTAAATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCAATCTGGAGCACTTCTaGGGGCACAGTTATTTTCTG +
Preference number: 5 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSNLEHF*GHSYFL
Trigger: CAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATT...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTTCTTGGGGCTATTCCTaGCAAATCTGGAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPSWGYS*QIWSTS
Trigger: AGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGA...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTAACAGCCTGCTTGTCTaGGTATTCTCTTGGGGCTAT +
Preference number: 5 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPNSLLV*VFSWGY
Trigger: ATAGCCCCAAGAGAATACCAAGACAAGCAGGCTGTT...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TGGTTTCATTTACGTGGAGGCAGAAGCAATGAGGATGAGGCGCATAGCTGGCCAGATATGCTGAGGCCTTaGGTTTCATTTACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: WFHLRGGRSNEDEAHSWPDMLRP*VSFTWR
Trigger: CCTCCACGTAAATGAAACCAAAGGCCTCAGCATATC...TGGCCAGCTATGCGCCTCATCCTCATTGCTTCTGCCTCCACGTAAATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCCACCTTCGCCAGCATTaGTTCTCTGCATTACTGGCT +
Preference number: 5 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGHLRQH*FSALLA
Trigger: AGCCAGTAATGCAGAGAACAAATGCTGGCGAAGGTG...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp ATATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGTTAAGGGGCTCCTGGTaGTTGTCTTTGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: ISIGASLLSLGPFFWAHLLRGSW*LSLLPE
Trigger: CTCTGGTAGCAAAGACAACAACCAGGAGCCCCTTAA...CAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGAGTTTCCCACAAGCCTaGCTGTTACTCCGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKSFPQA*LLLRLP
Trigger: CGGGAGACGGAGTAACAGCAAGGCTTGTGGGAAACT...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CAA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACAAGGGAGCACAGCCCTaGAAGAAGTTCATTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LREYVLAALFYILVPHCHKGAQP*KKFIPK
Trigger: TTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTT...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp CTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCCTGGTGCCTCACTGTCACTCCGGGTTTGACAAGTaGAGTTGTCTTCGGATTGAA +
Preference number: 5 (lower is better)
Translates to: LREYVLAALFYILVPHCHSGFDK*SCLRIE
Trigger: TTCAATCCGAAGACAACTCAACTTGTCAAACCCGGA...GTGACAGTGAGGCACCAGGATGTAGAACAATGCTGCCAGAACATATTCCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGTCCCAGAAAAGTCCTaGGCGGGCAAATTGACAGCT +
Preference number: 5 (lower is better)
Translates to: CQGHVRIYWDCCLISIGAVPEKS*AGKLTA
Trigger: AGCTGTCAATTTGCCCGCCAAGGACTTTTCTGGGAC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS-3UTR CAA 90 bp GCACAGAGGCCCACTAGGACCCATCAAAAAGGGAGCACAGCCCTTGAAGAAGTTCTCCTGTTATGTCCATaGCCTTTAAATTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: AQRPTRTHQKGSTALEEVLLLCP*PLNSLL
Trigger: AAGCAAGGAATTTAAAGGCAATGGACATAACAGGAG...AACTTCTTCAAGGGCTGTGCTCCCTTTTTGATGGGTCCTAGTGGGCCTCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACAATCTGGAGCACTTCTaGGGGCACAGTTATTTTCTG +
Preference number: 5 (lower is better)
Translates to: LGILLGLFLANLEHFLGHNLEHF*GHSYFL
Trigger: CAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATT...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAAACCTCTATGTGTGGTaGCCCAAGGCTATGACTCTG +
Preference number: 5 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRNLYVW*PKAMTL
Trigger: CAGAGTCATAGCCTTGGGCAACCACACATAGAGGTT...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AACCTTGGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCATTGGTTGGCAGACTaGGTCAGGAAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: NLGFSLNPSGWKPIREVKHWLAD*VRKEAE
Trigger: CTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAATG...CTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAAATAGCTGGCCATTGGTaGGCAGACTTGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQIAGHW*ADLVRK
Trigger: CTTCCTGACCAAGTCTGCCAACCAATGGCCAGCTAT...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CTTGGTATTCTCTTGGGGCTATTCCTTGCAAATCTGGAGCACTTCTTGGGGCACTTTGAATCCCAGTGGTaGGAAGCCAATCAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LGILLGLFLANLEHFLGHFESQW*EANQRS
Trigger: ACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAA...GTGCCCCAAGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGAGAATACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGTCCGATCTTGGTTCTTGGCATGAGAGACATGCTTCCCTGCAGCACATCACCTCTAGCCCTTCATGTTTaGCTTCTAAACACTGGTATG +
Preference number: 5 (lower is better)
Translates to: SPILVLGMRDMLPCSTSPLALHV*LLNTGM
Trigger: CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAG...AGGTGATGTGCTGCAGGGAAGCATGTCTCTCATGCCAAGAACCAAGATCGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TGCCTTGCACCTATAATGGGACAGAGAGGACCATTAGGTAACAGCCCCCAGTCCCAGAATTTATTGGGATaGCTGCCTGATATCTATTGG +
Preference number: 5 (lower is better)
Translates to: CLAPIMGQRGPLGNSPQSQNLLG*LPDIYW
Trigger: CCAATAGATATCAGGCAGCAATCCCAATAAATTCTG...GGACTGGGGGCTGTTACCTAATGGTCCTCTCTGTCCCATTATAGGTGCAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGCCTCCACTGGATCATaGAAGAAAAGTCGGTCACGA +
Preference number: 5 (lower is better)
Translates to: KGAQPLKKFIPKPQGICSASTGS*KKSRSR
Trigger: TCGTGACCGACTTTTCTTCAATGATCCAGTGGAGGC...AGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp AGCCACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAATCCTGGTTGTTGTCTTaGCTACCAGAGGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SHLLFHTNKPVASSLVSQSWLLS*LPEGRP
Trigger: AGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGGA...TTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCAGGGGCTCCTGGTTGTaGTCTTTGCTACCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: HNAHATEMYALLTNYFSFRGSWL*SLLPEG
Trigger: GCCCTCTGGTAGCAAAGACAACAACCAGGAGCCCCT...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ACAAGTGGATTTGGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTATGGACAAGTGGATTaGGTCAATGTTCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: TSGFGQCSREGHQRLWLRYGQVD*VNVLGR
Trigger: CCTCCCGAGAACATTGACCAAATCCACTTGTCCATA...ACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524820.6
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAGTTCATAGTCCGATCTaGGTTCTTGGCATGAGAGAC +
Preference number: 5 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRVHSPI*VLGMRD
Trigger: GTCTCTCATGCCAAGAACCAAGATCGGACTATGAAC...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGTCAATGTTCTCGGGAGGGACATCAAAGACTATGGCTTCGTTGTAAACAGGATTCTTGGGGCTATTCCTaGCAAATCTGGAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: GQCSREGHQRLWLRCKQDSWGYS*QIWSTS
Trigger: AGAAGTGCTCCAGATTTGCAAGGAATAGCCCCAAGA...ATCCTGTTTACAACGAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAGATATGCTGAGGCCTTaGGTTTCATTTACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRDMLRP*VSFTWR
Trigger: CCTCCACGTAAATGAAACCAAAGGCCTCAGCATATC...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAACAACCCAGGCTTCCATaGCCAAGGACATGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: GFSLNPSGWKPIREVKLEQPRLP*PRTCQN
Trigger: ATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTTG...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTTATGTTCTGGCAGCATaGTTCTACATCCTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: KGAQPLKKFIPKPQGICSYVLAA*FYILVP
Trigger: AGGCACCAGGATGTAGAACAATGCTGCCAGAACATA...AGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS CCA 90 bp AAATCTCCCTCCACCACCTTCGCCAGCATTTGTTCTCTGCATTACTaGCTTCTTCATATCATTCTTTCCCAAATTGAAGTCTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSPSTTFASICSLHY*LLHIILSQIEVSGR
Trigger: CCTGCCTGAGACTTCAATTTGGGAAAGAATGATATGAAGAAGCCAGTAATGCAGAGAACAAATGCTGGCGAAGGTGGTGGAGGGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp ACTAAAGGGCAACCAAACAGAATGCAAGAGAACAGAGGCAGAGTTGCAAATGGGTTCAAGGTGTTCCTCTaGGTGGATGTTTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TKGQPNRMQENRGRVANGFKVFL*VDVFLF
Trigger: GAAGAGGAAAACATCCACCAAGAGGAACACCTTGAA...CCCATTTGCAACTCTGCCTCTGTTCTCTTGCATTCTGTTTGGTTGCCCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTTATGGACAAGTGGATTaGGTCAATGTTCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: DAMSSSPRASYETLSPGTYGQVD*VNVLGR
Trigger: CCTCCCGAGAACATTGACCAAATCCACTTGTCCATA...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTAGCCTCGTTGCCTACTaGACACACGCCGATGATCTC +
Preference number: 5 (lower is better)
Translates to: KVVMCELRSAAYLAPGYISLVAY*THADDL
Trigger: GAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGCT...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TGCCAAGGACATGTCAGAATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCGATGGTTGTCCTATTTaGTCCTTGGCACAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: CQGHVRIYWDCCLISIGADGCPI*SLAQAV
Trigger: GACTGCTTGTGCCAAGGACAAAATAGGACAACCATC...GGCTCCAATAGATATCAGGCAGCAATCCCAATAAATTCTGACATGTCCTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TATCTATTGGAGCCAGTCTGCTTTCTCTGGGACCATTCTTCTGGGCTCATCTGCGTAGTCATGTGTGAATaGAGATCTGCTGCCTATTTA +
Preference number: 5 (lower is better)
Translates to: YLLEPVCFLWDHSSGLICVVMCE*RSAAYL
Trigger: TAAATAGGCAGCAGATCTCAATTCACACATGACTAC...GCAGATGAGCCCAGAAGAATGGTCCCAGAGAAAGCAGACTGGCTCCAATAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTCAATATGACTCTGGGCTGTaGCATATGGAAATACCCCAG +
Preference number: 5 (lower is better)
Translates to: IWSTSWGTVIFWRQSLAQYDSGL*HMEIPQ
Trigger: CTGGGGTATTTCCATATGCAACAGCCCAGAGTCATA...TTGAGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGATATGACTCTGGGCTGTaGCATATGGAAATACCCCAG +
Preference number: 5 (lower is better)
Translates to: IYWDCCLISIGASLLSLGYDSGL*HMEIPQ
Trigger: CTGGGGTATTTCCATATGCAACAGCCCAGAGTCATA...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GAAAGGATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATCATTGGTTGGCAGACTaGGTCAGGAAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ERIFHNAHATEMYALLTNHWLAD*VRKEAE
Trigger: CTCAGCTTCCTTCCTGACCAAGTCTGCCAACCAATG...ATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATATCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAACCTTGAGCAGAGGAAGCCAAGTTTTCCTTATGTCATCAGACATAGGCAGAAACCTTGGATTCTCTTaGAATCCCAGTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: GTLSRGSQVFLMSSDIGRNLGFS*NPSGWK
Trigger: CTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT...TCTGCCTATGTCTGATGACATAAGGAAAACTTGGCTTCCTCTGCTCAAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CACCTTCTATTTCATACCAATAAGCCAGTTGCATCCTCATTAGTATCCCAAGGCCAACCCAGGCTTCCATaGCCAAGGACATGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: HLLFHTNKPVASSLVSQGQPRLP*PRTCQN
Trigger: ATTCTGACATGTCCTTGGCAATGGAAGCCTGGGTTG...GCCTTGGGATACTAATGAGGATGCAACTGGCTTATTGGTATGAAATAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGAGCACAGCCCTTGAAGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCTTTAAGCAAAATACATaGCAGCCTCCACTGGATCAT +
Preference number: 5 (lower is better)
Translates to: GAQPLKKFIPKPQGICSGFKQNT*QPPLDH
Trigger: ATGATCCAGTGGAGGCTGCAATGTATTTTGCTTAAA...GCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCTTCAAGGGCTGTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS-3UTR CAA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTTTAAGGGGCTCCTGGTaGTTGTCTTTGCTACCAGAG +
Preference number: 5 (lower is better)
Translates to: LLFILITLPVERKGLLATLRGSW*LSLLPE
Trigger: CTCTGGTAGCAAAGACAACAACCAGGAGCCCCTTAA...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCAGCCTGCCAGCCGTaGGAAGATAGCACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: IFHNAHATEMYALLTNYFSACQP*EDSTGK
Trigger: TTTCCCTGTGCTATCTTCCAACGGCTGGCAGGCTGA...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAATTCAAGGTGTTCCTCTaGGTGGATGTTTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GFSLNPSGWKPIREVKLEFKVFL*VDVFLF
Trigger: GAAGAGGAAAACATCCACCAAGAGGAACACCTTGAA...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTTGTCCTATTTTGTCCTaGGCACAAGCAGTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: DAMSSSPRASYETLSPGTCPILS*AQAVLL
Trigger: TAAGAGGACTGCTTGTGCCAAGGACAAAATAGGACA...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTATCTTTGTGAGATGGTaGTCCTATTTTGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPIFVRW*SYFVLG
Trigger: GCCAAGGACAAAATAGGACAACCATCTCACAAAGAT...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CCATCCCCAAGTGGTGTGAAAGTGATGTATGTGTCTGAAGTGAGAAGGAAACCTTGTCTTGGTATTCTCTaGGGGCTATTCCTTGCAAAT +
Preference number: 5 (lower is better)
Translates to: PSPSGVKVMYVSEVRRKPCLGIL*GLFLAN
Trigger: ATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACA...AGGTTTCCTTCTCACTTCAGACACATACATCACTTTCACACCACTTGGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp TTACTTTTCATTCTAATAACACTCCCAGTTGAAAGGAAGGGGCTGCTAGCTACTAACCTCTATGTGTGGTaGCCCAAGGCTATGACTCTG +
Preference number: 5 (lower is better)
Translates to: LLFILITLPVERKGLLATNLYVW*PKAMTL
Trigger: CAGAGTCATAGCCTTGGGCAACCACACATAGAGGTT...AGTAGCTAGCAGCCCCTTCCTTTCAACTGGGAGTGTTATTAGAATGAAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTATAGCTGGCCATTGGTaGGCAGACTTGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIIAGHW*ADLVRK
Trigger: CTTCCTGACCAAGTCTGCCAACCAATGGCCAGCTAT...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATTTATTGGGATTGCTGCCTGATATCTATTGGAGCCAGTCTGCTTTCTCTGGGATTTGAATCCCAGTGGTaGGAAGCCAATCAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: IYWDCCLISIGASLLSLGFESQW*EANQRS
Trigger: ACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAA...TCCCAGAGAAAGCAGACTGGCTCCAATAGATATCAGGCAGCAATCCCAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GGATTCTCTTTGAATCCCAGTGGTTGGAAGCCAATCAGAGAAGTGAAGCTTGAAAACCTTGGATTCTCTTaGAATCCCAGTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: GFSLNPSGWKPIREVKLENLGFS*NPSGWK
Trigger: CTTCCAACCACTGGGATTCAAAGAGAATCCAAGGTT...TTCAAGCTTCACTTCTCTGATTGGCTTCCAACCACTGGGATTCAAAGAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCGTACTCTTTGCCTGCTaGCCCCTACAAAGCCACCTT +
Preference number: 5 (lower is better)
Translates to: HNAHATEMYALLTNYFSFVLFAC*PLQSHL
Trigger: AAGGTGGCTTTGTAGGGGCAAGCAGGCAAAGAGTAC...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLAASYET*SPGTLG
Trigger: ACCAAGAGTACCAGGACTCAATGTTTCATATGAAGC...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CAAATCTGGAGCACTTCTTGGGGCACAGTTATTTTCTGGAGACAGTCATTAGCTTGTCTTGGTATTCTCTaGGGGCTATTCCTTGCAAAT +
Preference number: 5 (lower is better)
Translates to: QIWSTSWGTVIFWRQSLACLGIL*GLFLAN
Trigger: ATTTGCAAGGAATAGCCCCAAGAGAATACCAAGACA...AGCTAATGACTGTCTCCAGAAAATAACTGTGCCCCAAGAAGTGCTCCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp CTAACTATCCTGGTGGCGCTAGCCCTTCATGTTTTGCTTCTAAACACTGGTATGCAGAATTTATTGGGATaGCTGCCTGATATCTATTGG +
Preference number: 5 (lower is better)
Translates to: LTILVALALHVLLLNTGMQNLLG*LPDIYW
Trigger: CCAATAGATATCAGGCAGCAATCCCAATAAATTCTG...CATACCAGTGTTTAGAAGCAAAACATGAAGGGCTAGCGCCACCAGGATAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AGAAGTTCATTCCCAAACCTCAGGGAATATGTTCTGGCAGCATTGTTCTACATCTCATTCTTTCCCAAATaGAAGTCTCAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RSSFPNLREYVLAALFYISFFPK*KSQAGG
Trigger: TCCTCCTGCCTGAGACTTCAATTTGGGAAAGAATGA...GATGTAGAACAATGCTGCCAGAACATATTCCCTGAGGTTTGGGAATGAACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS GCA 90 bp GCCTTGCTGTTACTCCGTCTCCCGTCATCATTATCCAATGACCTCTaGTTATATAACTCTGGTTTAATTCTACCAATTCCAGTCAACTGT +
Preference number: 5 (lower is better)
Translates to: ALLLLRLPSSLSNDL*LYNSGLILPIPVNC
Trigger: ACAGTTGACTGGAATTGGTAGAATTAAACCAGAGTTATATAAGCAGAGGTCATTGGATAATGATGACGGGAGACGGAGTAACAGCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS-3UTR CAA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTGTTACAGCTGAGCATTaGGTCACTGAAATCGTCTGG +
Preference number: 5 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIVTAEH*VTEIVW
Trigger: CCAGACGATTTCAGTGACCAAATGCTCAGCTGTAAC...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp GATGCTATGTCCTCATCACCAAGGGCTTCATATGAAACATTGAGTCCTGGTACTGTAGTCATGTGTGAATaGAGATCTGCTGCCTATTTA +
Preference number: 5 (lower is better)
Translates to: DAMSSSPRASYETLSPGTVVMCE*RSAAYL
Trigger: TAAATAGGCAGCAGATCTCAATTCACACATGACTAC...AGTACCAGGACTCAATGTTTCATATGAAGCCCTTGGTGATGAGGACATAGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTGAAAACAGGGCCATGTaGATACTGGTACTCTCTACC +
Preference number: 5 (lower is better)
Translates to: KVVMCELRSAAYLAPGYIENRAM*ILVLST
Trigger: GGTAGAGAGTACCAGTATCAACATGGCCCTGTTTTC...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS TCA 90 bp TCTGAAGTCCCAGAAAAGTCCTTGGCGGGCAAATTGACAGCTTTGTaGATCTTCACTATGAGCTGCTCTAAGTCACAGTCATATTTTAAA +
Preference number: 5 (lower is better)
Translates to: SEVPEKSLAGKLTAL*IFTMSCSKSQSYFK
Trigger: TTTAAAATATGACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACAAAGCTGTCAATTTGCCCGCCAAGGACTTTTCTGGGACTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS-3UTR CAA 90 bp CACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTTCATTCGAAATCGTCTGGATGTaGCTGGATGGAAAAAGTTAC +
Preference number: 5 (lower is better)
Translates to: HNAHATEMYALLTNYFSFEIVWM*LDGKSY
Trigger: GTAACTTTTTCCATCCAGCAACATCCAGACGATTTC...GAATGAAAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp AAGGTAGTCATGTGTGAATTGAGATCTGCTGCCTATTTAGCACCTGGATATATTCTCCTGTTATGTCCATaGCCTTTAAATTCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KVVMCELRSAAYLAPGYILLLCP*PLNSLL
Trigger: AAGCAAGGAATTTAAAGGCAATGGACATAACAGGAG...AATATATCCAGGTGCTAAATAGGCAGCAGATCTCAATTCACACATGACTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS-3UTR CAA 90 bp ATATTCCACAATGCTCATGCCACTGAGATGTATGCCCTTCTAACTAATTACTTTGCTTCATATGAAACATaGAGTCCTGGTACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: IFHNAHATEMYALLTNYFASYET*SPGTLG
Trigger: ACCAAGAGTACCAGGACTCAATGTTTCATATGAAGC...AAAGTAATTAGTTAGAAGGGCATACATCTCAGTGGCATGAGCATTGTGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS TCA 72 bp TCACCGCCAGGGACCTGCCGAGAAACGGTGCGAGCCTaGGCCCGAGCCCCAGACCCAGCCGGCCCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPPGTCRETVRA*ARAPDPAGPAS
Trigger: GGAGGCCGGGCCGGCTGGGTCTGGGGCTCGGGCTCAGGCTCGCACCGTTTCTCGGCAGGTCCCTGGCGGTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318881.11
CDS TCA 72 bp GGAGCCGGGGTCTGGCACGGTCCCGCAGGTGGTAAATaGAATCCTGGCAGCTGTCGTGCTCCAGGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: GAGVWHGPAGGK*NPGSCRAPGPH
Trigger: GTGGGGCCCTGGAGCACGACAGCTGCCAGGATTTCATTTACCACCTGCGGGACCGTGCCAGACCCCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000532592.1
CDS GCA 72 bp TGCCGGGCCGACGAGGTTGGCTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCACAGTTCTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: CRADEVGSVTWR*TRTPWAQFSWI
Trigger: GATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS GCA 72 bp GTCCGGGCCGACGAGGTTGGCTCTGTGACTTGGCGCTaGACGCGGACGCCATGGGCACAGTTCTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: VRADEVGSVTWR*TRTPWAQFSWI
Trigger: GATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CCA 72 bp TGGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTaGATCCCCGTCTGGGTGGAGAGGGGAATGTCAGGG +
Preference number: 6 (lower is better)
Translates to: WRCTRTPWAQFS*IPVWVERGMSG
Trigger: CCCTGACATTCCCCTCTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318881.11
ENST00000524820.6
ENST00000532592.1
CDS CCA 72 bp CACGTTGTCCGGGCCGACGAGGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCATGGGCACAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: HVVRADEVGSVT*RCTRTPWAQFS
Trigger: GGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CCA 72 bp GCTCTCCCAGATCCACGTTGTCCGGGCCGACGAGGTTaGCTCTGTGACTTGGCGCTGCACGCGGACGCCATG +
Preference number: 6 (lower is better)
Translates to: ALPDPRCPGRRG*LCDLALHADAM
Trigger: CATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGATCTGGGAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CAA 72 bp CCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTGACTaGGCGCTGCACGCGGACGCCATGGGCACAGTTCTC +
Preference number: 6 (lower is better)
Translates to: PRCPGRRGWLCD*ALHADAMGTVL
Trigger: GAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CAA 90 bp CTCCCAGATCCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTGACTaGGCGCTGCACGCGGACGCCATGGGCACAGTTCTCCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: LPDPRCPGRRGWLCD*ALHADAMGTVLLDP
Trigger: GGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGATCTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS TCA 72 bp AGATCCACGTTGTCCGGGCCGACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGACGCCATGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: RSTLSGPTRLAL*LGAARGRHGHS
Trigger: ACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGACAACGTGGATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532592.1
CDS CCA 72 bp GTTGGCTCTGTGACTTGGCGCTGCACGCGGACGCCATaGGCACAGTTCTCCTGGATCCCCGTCTGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: VGSVTWRCTRTP*AQFSWIPVWVE
Trigger: CTCCACCCAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318881.11
ENST00000524820.6
ENST00000532592.1
CDS CCA 72 bp GAATTATGCCGGGCCGACGAGGTTGGCTCTGTGACTTaGCGCTGCACGCGGACGCCATGGGCACAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ELCRADEVGSVT*RCTRTPWAQFS
Trigger: GGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCATAATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS TCA 72 bp GGATTGAATTATGCCGGGCCGACGAGGTTGGCTCTGTaGCTTGGCGCTGCACGCGGACGCCATGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: GLNYAGPTRLAL*LGAARGRHGHS
Trigger: ACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCGGCCCGGCATAATTCAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS TCA 72 bp CCAGAAAAGTCCTTGGCGGGCAAATTGACAGCTTTGTaGATCTTCACTATGAGCTGCTCTAAGTCACAGTCA +
Preference number: 6 (lower is better)
Translates to: PEKSLAGKLTAL*IFTMSCSKSQS
Trigger: TGACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACAAAGCTGTCAATTTGCCCGCCAAGGACTTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6
CDS GCA 72 bp AATCTCCCTCCACCACCTTCGCCAGCATTTGTTCTCTaGATTACTGGCTTCTTCATATCATTCTTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: NLPPPPSPAFVL*ITGFFISFFPK
Trigger: TTTGGGAAAGAATGATATGAAGAAGCCAGTAATGCAGAGAACAAATGCTGGCGAAGGTGGTGGAGGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS CCA 72 bp TCCACCACCTTCGCCAGCATTTGTTCTCTGCATTACTaGCTTCTTCATATCATTCTTTCCCAAATTGAAGTC +
Preference number: 6 (lower is better)
Translates to: STTFASICSLHY*LLHIILSQIEV
Trigger: GACTTCAATTTGGGAAAGAATGATATGAAGAAGCCAGTAATGCAGAGAACAAATGCTGGCGAAGGTGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS TCA 72 bp GCATTACTGGCTTCTTCATATCATTCTTTCCCAAATTaGAGTCTCAGGCAGGAGGATCATGTTGACAAAGCT +
Preference number: 6 (lower is better)
Translates to: ALLASSYHSFPN*SLRQEDHVDKA
Trigger: AGCTTTGTCAACATGATCCTCCTGCCTGAGACTTCAATTTGGGAAAGAATGATATGAAGAAGCCAGTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524820.6
CDS GCA 72 bp TTACTCCGTCTCCCGTCATCATTATCCAATGACCTCTaGTTATATAACTCTGGTTTAATTCTACCAATTCCA +
Preference number: 6 (lower is better)
Translates to: LLRLPSSLSNDL*LYNSGLILPIP
Trigger: TGGAATTGGTAGAATTAAACCAGAGTTATATAAGCAGAGGTCATTGGATAATGATGACGGGAGACGGAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318881.11
ENST00000524820.6