RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT7 (Homo sapiens)

Ensembl gene IDs: ENSG00000011347

Ensembl transcript IDs: ENST00000263846.8, ENST00000535826.5, ENST00000539008.6, ENST00000539246.5, ENST00000539468.5, ENST00000540677.5, ENST00000540831.1, ENST00000542670.5, ENST00000542836.5, ENST00000545053.1

Found 939 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAGGTGCCCTGCCGAGCCTGGCCCCGGCCATAGGCCCGGGGGTTaGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCTGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: PRCPAEPGPGHRPGG*GLVPRPCGPAAGPG
Trigger: GCCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCTATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 90 bp AGCCCCGCCGCTTCTCAAGGCGTCCTCTCCGGGTGGCGGCACCGGTaGCGGCTTCTCCCCCAGCCGGCCTTCCCGCTCCACCGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SPAASQGVLSGWRHR*RLLPQPAFPLHRQP
Trigger: GGGCTGGCGGTGGAGCGGGAAGGCCGGCTGGGGGAGAAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 90 bp AGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTACTTaGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCCGGCCATAGG +
Preference number: 1 (lower is better)
Translates to: SCLGWSGCGPLPPGT*SRPRCPAEPGPGHR
Trigger: CCTATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp GCCATGTGGGCCTGCAGCTGGCCCAGGCTCTGGCTGGTGGTGGGCTaGCTGGGCTGCCGGCCCCGCTGGTGCTGGCTCAGCGGCTGTTGC +
Preference number: 1 (lower is better)
Translates to: AMWACSWPRLWLVVG*LGCRPRWCWLSGCC
Trigger: GCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCCAGCTGCAGGCCCACATGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp CCCAGGCTCTGGCTGGTGGTGGGCTGGCTGGGCTGCCGGCCCCGCTaGTGCTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGG +
Preference number: 1 (lower is better)
Translates to: PRLWLVVGWLGCRPR*CWLSGCCRLCCRIR
Trigger: CCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 90 bp AGGCTCTGGCTGGTGGTGGGCTGGCTGGGCTGCCGGCCCCGCTGGTaGTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTG +
Preference number: 1 (lower is better)
Translates to: RLWLVVGWLGCRPRW*WLSGCCRLCCRIRV
Trigger: CACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 90 bp TGCCGGCCCCGCTGGTGCTGGCTCAGCGGCTGTTGCAGGCTCTGCTaGCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTCTCCCGTG +
Preference number: 1 (lower is better)
Translates to: CRPRWCWLSGCCRLC*RIRVRGRWHFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp CAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTACTTGGAGCC +
Preference number: 1 (lower is better)
Translates to: QASVSNLPHHVVPAA*VGAAAAPCRPVLGA
Trigger: GGCTCCAAGTACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp GAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTGTTCACCGCCTTCCCTCCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: EERGSVRRSDSSWGV*PGTGAVFTAFPPAG
Trigger: GCCTGCAGGAGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 90 bp TGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTACTTGG +
Preference number: 1 (lower is better)
Translates to: CPSLGFESAPPRGPS*LGWSGCGPLPPGTW
Trigger: CCAAGTACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp ACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCACCGCCTTCCCTCCTGCAGGCAACCT +
Preference number: 1 (lower is better)
Translates to: TWLGPAVGLIVGCLA*HGGCVHRLPSCRQP
Trigger: AGGTTGCCTGCAGGAGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 90 bp ACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTaGCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGG +
Preference number: 1 (lower is better)
Translates to: TLTSRASLPGPRPTA*RPNIASQSSTCTWW
Trigger: CCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 90 bp TCCTCGAAATTGGACAAGTTGAGCTTCCCTGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCACCGCTGCCC +
Preference number: 1 (lower is better)
Translates to: SSKLDKLSFPAARWL*TVRQRPLPALPPLP
Trigger: GGGCAGCGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 90 bp GGGTACTTAGTGCAGCTCCGGGAGGCAGCTGCTGGCCCCAAGTGCTaGGAGCAGAGGGCGGATGGGATGGCCCGCTTCACTCCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: GYLVQLREAAAGPKC*EQRADGMARFTPGG
Trigger: CCCACCAGGAGTGAAGCGGGCCATCCCATCCGCCCTCTGCTCCCAGCACTTGGGGCCAGCAGCTGCCTCCCGGAGCTGCACTAAGTACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 90 bp TCTGAGACGGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACGGGGGCTGTGTTCACCGCCTTCCCT +
Preference number: 1 (lower is better)
Translates to: SETEERGSVRRSDSS*GVWPGTGAVFTAFP
Trigger: AGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCCGTCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp GTGGAGTCCTCGAAATTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCACCG +
Preference number: 1 (lower is better)
Translates to: VESSKLDKLSFPAAR*LCTVRQRPLPALPP
Trigger: CGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR GCA 90 bp ATGGGGTACTTAGTGCAGCTCCGGGAGGCAGCTGCTGGCCCCAAGTaGTGGGAGCAGAGGGCGGATGGGATGGCCCGCTTCACTCCTGGT +
Preference number: 1 (lower is better)
Translates to: MGYLVQLREAAAGPK*WEQRADGMARFTPG
Trigger: ACCAGGAGTGAAGCGGGCCATCCCATCCGCCCTCTGCTCCCAGCACTTGGGGCCAGCAGCTGCCTCCCGGAGCTGCACTAAGTACCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 90 bp CATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGCTaGGGAAGCCCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTG +
Preference number: 1 (lower is better)
Translates to: HSIPELHLHVVVVGR*GSPSLVANVPGWGL
Trigger: CAGACCCCACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp CGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTaGGGCGCTGGGGAAGCCCAAGCCTGGTCGCTAATGTGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: RPNIASQSSTCTWWW*GAGEAQAWSLMCLG
Trigger: ACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp AAGGATTTCATGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTGGAGCGGCTGCGGCCCCCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: KDFMSKPRFRICPTT*SQLPGLERLRPPAA
Trigger: GGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACATGAAATCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp AGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTA +
Preference number: 1 (lower is better)
Translates to: SGCCRLCCRIRVRGR*HFGSPVELGIDSRV
Trigger: TACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 90 bp TGGGGAGAGCATGAGCATCTCGCTGGTGAGGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTG +
Preference number: 1 (lower is better)
Translates to: WGEHEHLAGEGVDEV*DGGTWLGPAVGLIV
Trigger: CACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGAGATGCTCATGCTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp CCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTaGGAACTGAGGGAGGGGACGTCAGGCTGGGTGACCCTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: PFGLSELPWRVASVL*ELREGTSGWVTLEG
Trigger: GCCCTCCAGGGTCACCCAGCCTGACGTCCCCTCCCTCAGTTCCCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR TCA 90 bp GCCCAGTTCTCAGCCCAGCTCCAGCAACTGCAGCTCTTCTGTTTCTaGCCTCTGCCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: AQFSAQLQQLQLFCF*PLPHPTPLSPMGLS
Trigger: GGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGGCAGAGGTCAGAAACAGAAGAGCTGCAGTTGCTGGAGCTGGGCTGAGAACTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp GCGGGGCGTCTTCACGGGAAACAGATGGTCTGGGGAGCCACGAGCTaGGGCATCGGCGTGCTCAAGGCTTGTCCTTCTGGTTGTCTTTGC +
Preference number: 1 (lower is better)
Translates to: AGRLHGKQMVWGATS*GIGVLKACPSGCLC
Trigger: GCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCAGACCATCTGTTTCCCGTGAAGACGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR GCA 90 bp ACGGGAAACAGATGGTCTGGGGAGCCACGAGCTGGGGCATCGGCGTaGTCAAGGCTTGTCCTTCTGGTTGTCTTTGCGTGGGAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: TGNRWSGEPRAGASA*SRLVLLVVFAWEGE
Trigger: CTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCAGACCATCTGTTTCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 90 bp GGCCCAGGCTCGTGGACCCCCAGGATTGGAGGCTTTGTCACCAGCTaGGTCTTGTATCAATACCAGGACCAGCGTGGGGATGAGAGGGCT +
Preference number: 1 (lower is better)
Translates to: GPGSWTPRIGGFVTS*VLYQYQDQRGDERA
Trigger: AGCCCTCTCATCCCCACGCTGGTCCTGGTATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp TGGCGCCACCTGGCGGTAGTTCTGGGAATGTCAGGCCCAGGCTCGTaGACCCCCAGGATTGGAGGCTTTGTCACCAGCTGGGTCTTGTAT +
Preference number: 1 (lower is better)
Translates to: WRHLAVVLGMSGPGS*TPRIGGFVTSWVLY
Trigger: ATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCCCAGAACTACCGCCAGGTGGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp CAGGGACCAGGAAGGAGGCGCTGGCCTGAAACTACAGTGGCCCCATaGATGGTGGTGGGAAAGCTGGAGCGTCCCCCTTTGGTTTGTCTG +
Preference number: 1 (lower is better)
Translates to: QGPGRRRWPETTVAP*MVVGKLERPPLVCL
Trigger: CAGACAAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATGGGGCCACTGTAGTTTCAGGCCAGCGCCTCCTTCCTGGTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR GCA 90 bp GGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTaGTCACGGGTAGCACCTTCGGAGTCCTCCTGCCTTGACCCCCAG +
Preference number: 1 (lower is better)
Translates to: GGAGGPCSQDSVITL*SRVAPSESSCLDPQ
Trigger: CTGGGGGTCAAGGCAGGAGGACTCCGAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp TGCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGA +
Preference number: 1 (lower is better)
Translates to: CPPGGPLEGSACLAV*LSSSPNFFSISKSG
Trigger: TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR CCA 90 bp GCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCAACCCTGCCTaGCCTTCACAAAACCTGCCTTCTCTGTATAGTCCTCCGCATTTC +
Preference number: 1 (lower is better)
Translates to: ALWASPLTPPASNPA*PSQNLPSLYSPPHF
Trigger: GAAATGCGGAGGACTATACAGAGAAGGCAGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp CTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGATGACGTCATT +
Preference number: 1 (lower is better)
Translates to: LPGTGNHVLPVLHLP*PALPGQVDLADDVI
Trigger: AATGACGTCATCGGCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 90 bp CATGGATGGTGGTGGGAAAGCTGGAGCGTCCCCCTTTGGTTTGTCTaGGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGAACTGAGGGA +
Preference number: 1 (lower is better)
Translates to: HGWWWESWSVPLWFV*AALEGGKCPLGTEG
Trigger: TCCCTCAGTTCCCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR GCA 90 bp TCTAGGGCACCCACAAAGATGGCAGACGAAGCCCATGAAAGGGCCTaGGACAGAGTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTA +
Preference number: 1 (lower is better)
Translates to: SRAPTKMADEAHERA*DRVKRRMGLRWPQL
Trigger: TAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTCTGCCATCTTTGTGGGTGCCCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 90 bp GCTGGGCCTGAGCTGTCTCTGACTTCAGGCTCAGTTTTCCAGGGCTaGTTTCATGGAGAGCGCCTGAACAGAAGCTCTGGCCAAGGGAGC +
Preference number: 1 (lower is better)
Translates to: AGPELSLTSGSVFQG*FHGERLNRSSGQGS
Trigger: GCTCCCTTGGCCAGAGCTTCTGTTCAGGCGCTCTCCATGAAAGCAGCCCTGGAAAACTGAGCCTGAAGTCAGAGACAGCTCAGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR GCA 90 bp CTCCCACTCCCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCC +
Preference number: 1 (lower is better)
Translates to: LPLPSLHGFRSFQKV*IWVRSTLLRGMDTS
Trigger: GGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp GGTAGTTCTGGGAATGTCAGGCCCAGGCTCGTGGACCCCCAGGATTaGAGGCTTTGTCACCAGCTGGGTCTTGTATCAATACCAGGACCA +
Preference number: 1 (lower is better)
Translates to: GSSGNVRPRLVDPQD*RLCHQLGLVSIPGP
Trigger: TGGTCCTGGTATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCCCAGAACTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp CTCCCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCCCCAATG +
Preference number: 1 (lower is better)
Translates to: LPSLHGFRSFQKVCI*VRSTLLRGMDTSPM
Trigger: CATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 90 bp AGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATaGATGGAAGGTCTACAAGCATTGGGGGATGGAGGGGTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: RSGDGRSETTHDETE*MEGLQALGDGGVEE
Trigger: TTCCTCCACCCCTCCATCCCCCAATGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp ATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCAAAAATaGAGGAAGGCAAAAAGTCCAGGGAAGGGCCCGAGCCAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: ISEQAWTKTDPEKQK*RKAKSPGKGPSQWQ
Trigger: TTGCCACTGGCTCGGGCCCTTCCCTGGACTTTTTGCCTTCCTCCATTTTTGCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 90 bp AGGCAACCTCTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGA +
Preference number: 1 (lower is better)
Translates to: RQPLVPLSVLVLLGS*VLQVRDIGKVILFR
Trigger: TCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 90 bp GTCTCATCAGTGGCCGAGGCAGAGAAACCACAGCTTCTTTGTGTGTaGCAACCTCAGAACTCACAGAATCCTGGTCTTTTCCCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: VSSVAEAEKPQLLCV*QPQNSQNPGLFPAS
Trigger: GGAGGCAGGGAAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTCTCTGCCTCGGCCACTGATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 90 bp AGGTGCGGGGGTCCTGGGGCGGGTGGAATTTGTACAGCACTTTCATaGGGAGATGGTCACAAGAAAGGAAACCAGGACAAGATAAGGACT +
Preference number: 1 (lower is better)
Translates to: RCGGPGAGGICTALS*GDGHKKGNQDKIRT
Trigger: AGTCCTTATCTTGTCCTGGTTTCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCCAGGACCCCCGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR TCA 90 bp CCTGACCCCGGGGCTTCCTCTGATCTCTGGAACAGAGATCAGAAGTaGTATCTAAACCAGGTTGTGGGAAATGAGGGACAGACAGCTTTG +
Preference number: 1 (lower is better)
Translates to: PDPGASSDLWNRDQK*YLNQVVGNEGQTAL
Trigger: CAAAGCTGTCTGTCCCTCATTTCCCACAACCTGGTTTAGATATCACTTCTGATCTCTGTTCCAGAGATCAGAGGAAGCCCCGGGGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 90 bp ATATTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTaGTCACCAGTGAAGTCAAATCCCAAAGGTGACACACTGAGGGGA +
Preference number: 1 (lower is better)
Translates to: IFYRDLRMAGHSGRA*SPVKSNPKGDTLRG
Trigger: TCCCCTCAGTGTGTCACCTTTGGGATTTGACTTCACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp CGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGTGGTGGTGGGCTGGCTaGGCTGCCGGCCCCGCTGGT +
Preference number: 2 (lower is better)
Translates to: RPPAARYLEPAEVPCRAWWWWAG*AAGPAG
Trigger: ACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCA...CCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp CCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCTGCCGGCCCCGCTGGTaGTGGCTCAGCGGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: PPAARYLEPAEVPCRAWPCRPRW*WLSGCC
Trigger: GCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCA...GGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCGGCCCAGGCTCTGGCTaGTGGTGGGCTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGGPGSG*WWAGWA
Trigger: AGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCC...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGRVRGR*HFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCT...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGGCGTCCTCTCCGGGTaGCGGCACCGGTGCCGGCTT +
Preference number: 2 (lower is better)
Translates to: LAQRLLQALLPHQGAGSLGVLSG*RHRCRL
Trigger: AAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCC...CAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCGGCTCTGGCTGGTGGTaGGCTGGCTGGGCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPGSGWW*AGWAAG
Trigger: GCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCC...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCGGTGCCGAGGCCATGTaGGCCTGCAGCTGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPGAEAM*ACSWPR
Trigger: CCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACC...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCGCCTCTGGAGGGGTCTaGCTGTCTGGCCGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLASGGV*LSGRLA
Trigger: AGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGC...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: TTLTSRASLPGPRPTACRGLERE*PLSTPG
Trigger: ACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCC...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCCTGCCTCCTTTCCCTaGACTGTGAGTGAGTCGGGC +
Preference number: 2 (lower is better)
Translates to: TTLTSRASLPGPRPTACRPASFP*TVSESG
Trigger: GCCCGACTCACTCACAGTGCAGGGAAAGGAGGCAGG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: TTLTSRASLPGPRPTACRGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCGAGGCCATGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GDGQSCPSSASPPLARSSEAMWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTC...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATGTGGGGGATGGGGCTaGTACTTCCTAGAAACGGGG +
Preference number: 2 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRCGGWG*YFLETG
Trigger: CCCCGTTTCTAGGAAGTACCAGCCCCATCCCCCACA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGGGATGGGCCTCTCCTaGCCAGGCCGGGGCCAAACG +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWGMGLS*PGRGQT
Trigger: CGTTTGGCCCCGGCCTGGCCAGGAGAGGCCCATCCC...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCAGGCCCATCCAGAGTaGAACTGGGGGCTAAGACCA +
Preference number: 2 (lower is better)
Translates to: TTLTSRASLPGPRPTACRQAHPE*NWGLRP
Trigger: TGGTCTTAGCCCCCAGTTCCACTCTGGATGGGCCTG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 90 bp TCCTCGGAGCCTGGGGAGAGCATGAGCATCTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAGGAACGTGGCTCGGTCCGGCGGTCG +
Preference number: 2 (lower is better)
Translates to: SSEPGESMSISLVRE*TRSETEERGSVRRS
Trigger: CGACCGCCGGACCGAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGAGATGCTCATGCTCTCCCCAGGCTCCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGGACGTCAGGCTGGGTaGCCCTGGAGGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSGRQAG*PWRAPL
Trigger: CAGGGGTGCCCTCCAGGGTCACCCAGCCTGACGTCC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCGCTGCCGCATCAGGGTaGGGGGTCGCTGGCATTTCG +
Preference number: 2 (lower is better)
Translates to: GDGQSCPSSASPPLARSSAAASG*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGC...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGTCCTCCCCTCCCTATaGCAGGGGGCTCAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAVLPSL*QGAQAG
Trigger: CCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGAC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHGLERE*PLSTPG
Trigger: ACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCC...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR TCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGAAACGGGGCCCAGTTaGGTCCTGGGACCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWETGPS*VLGPLP
Trigger: AGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTC...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCGCCTCTGGAGGGGTCTaGCTGTCTGGCCGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGASGGV*LSGRLA
Trigger: AGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGC...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGTCCTCCCCTCCCTATaGCAGGGGGCTCAGGCCGGG +
Preference number: 2 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAVLPSL*QGAQAG
Trigger: CCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGAC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACAGGGCGAAGGCGCCTaGAAGGTGGGGGCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLQGEGA*KVGAGS
Trigger: TGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCCACTCGATACAAGTTaGTTGGATCCCCAGGGCGAA +
Preference number: 2 (lower is better)
Translates to: TTLTSRASLPGPRPTACRPLDTS*LDPQGE
Trigger: TTCGCCCTGGGGATCCAACCAACTTGTATCGAGTGG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCACGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: GTGNHVLPVLHLPWPALPRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...TGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CAA 90 bp GATGGTCTGGGGAGCCACGAGCTGGGGCATCGGCGTGCTCAAGGCTaGTCCTTCTGGTTGTCTTTGCGTGGGAGGGAGAGGAGCGCAGGA +
Preference number: 2 (lower is better)
Translates to: DGLGSHELGHRRAQG*SFWLSLRGRERSAG
Trigger: TCCTGCGCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCAGACCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR TCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCAGATGTGGCTGCGTATaGGGTGTGGGAAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGRCGCV*GVGSWR
Trigger: CCGCCAGCTTCCCACACCTCATACGCAGCCACATCT...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTATCGGGCAGAAGGAGCTaGTCCCGGGGACCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLSGRRS*SRGPGS
Trigger: ACTCCCTGGTCCCCGGGAGCAGCTCCTTCTGCCCGA...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTATCCCAGAGCTCCACCTaGACGTGGTGGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLSQSST*TWWWWG
Trigger: GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGA...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp ATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCT +
Preference number: 2 (lower is better)
Translates to: IAAWLQILPEGLHLGQVHAARWL*TVRQRP
Trigger: AGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGC...GTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR-3UTR GCA 90 bp CCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGATGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: PVLHLPWPALPGQVDLADGCCRL*CRIRVR
Trigger: CCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC...ATCGGCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QRATAPGPRSGLYTILDIGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATCCTGGGACCCCTCCCTaGCTGAGCCCTCAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYPGTPP*LSPQGP
Trigger: AGGACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGG...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRACLAV*LSSSPN
Trigger: GTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGC...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACACGGCCACAGACTGTaGGGGCCTGGCGCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSHGHRL*GPGATW
Trigger: CCAGGTGGCGCCAGGCCCCCACAGTCTGTGGCCGTG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGGGTCTCCCCACGCCCTaGATGTGGGGACCCTATCCA +
Preference number: 2 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLGLPTP*MWGPYP
Trigger: TGGATAGGGTCCCCACATCCAGGGCGTGGGGAGACC...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 90 bp GAGCTGGGGCATCGGCGTGCTCAAGGCTTGTCCTTCTGGTTGTCTTaGCGTGGGAGGGAGAGGAGCGCAGGACGTAACCCAGGACAGCCT +
Preference number: 2 (lower is better)
Translates to: ELGHRRAQGLSFWLS*RGRERSAGRNPGQP
Trigger: AGGCTGTCCTGGGTTACGTCCTGCGCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 90 bp AGCCACGAGCTGGGGCATCGGCGTGCTCAAGGCTTGTCCTTCTGGTaGTCTTTGCGTGGGAGGGAGAGGAGCGCAGGACGTAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: SHELGHRRAQGLSFW*SLRGRERSAGRNPG
Trigger: TCCTGGGTTACGTCCTGCGCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGGGACCATGCCCACCTaGCGGGCCTCTGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: QRATAPGPRSGLYTILDIGTMPT*RASGGV
Trigger: GACCCCTCCAGAGGCCCGCCAGGTGGGCATGGTCCC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGTCCACATCGGGGGCTaGAGAGGGAGTGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: ASPFGLSELPWRVASVLWVHIGG*RGSGLS
Trigger: AGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGAC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGGGATGGGCCTCTCCTaGCCAGGCCGGGGCCAAACG +
Preference number: 2 (lower is better)
Translates to: QRATAPGPRSGLYTILDIGMGLS*PGRGQT
Trigger: CGTTTGGCCCCGGCCTGGCCAGGAGAGGCCCATCCC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGCCCACGCCCTGGATGTaGGGACCCTATCCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: ASPFGLSELPWRVASVLWPTPWM*GPYPES
Trigger: GGACTCTGGATAGGGTCCCCACATCCAGGGCGTGGG...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTGCCTGGGTGGGGTCTaGTTGGGAAGAGACCCCTGC +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRCLGGV*LGRDPC
Trigger: GCAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCTGGTGGTGGGCTGGCTaGGCTGCCGGCCCCGCTGGT +
Preference number: 2 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGWWWAG*AAGPAG
Trigger: ACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCA...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CAA 90 bp ACAGTGGCCCCATGGATGGTGGTGGGAAAGCTGGAGCGTCCCCCTTaGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TVAPWMVVGKLERPP*VCLSCLGGWQVSSG
Trigger: CCCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATGGGGCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR TCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCCTTTCCCTGCACTGTaGGTGAGTCGGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWPFPAL*VSRAEG
Trigger: TCCTTCTGCCCGACTCACTCACAGTGCAGGGAAAGG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp GTCGTTGCGGCTGAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: VVAAEAVIVQDLEVEDPLGCCRL*CRIRVR
Trigger: CCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC...CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGCCGCAACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp GAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCTCGAGGCCATGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: EAVIVQDLEVEDPLHHLLEAMWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTC...GAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCCTGGGACCCCTCCCTaGCTGAGCCCTCAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPPGTPP*LSPQGP
Trigger: AGGACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGG...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: QRATAPGPRSGLYTILDIHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATGTCCACATCGGGGGCTaGAGAGGGAGTGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYVHIGG*RGSGLS
Trigger: AGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGAC...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATCACCTGAAACTGCCCTaGGGATGGGCCTCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYHLKLP*GWASPG
Trigger: GCCAGGAGAGGCCCATCCCCAGGGCAGTTTCAGGTG...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGCCTCCAACCCTGCCTaGCCTTCACAAAACCTGCCT +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWASNPA*PSQNLP
Trigger: AGGCAGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGC...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCTCTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAG +
Preference number: 2 (lower is better)
Translates to: EAVIVQDLEVEDPLHHLLFPAAR*LCTVRQ
Trigger: CTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAA...GAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CAA 90 bp TGGGAATGTCAGGCCCAGGCTCGTGGACCCCCAGGATTGGAGGCTTaGTCACCAGCTGGGTCTTGTATCAATACCAGGACCAGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: WECQAQARGPPGLEA*SPAGSCINTRTSVG
Trigger: CCCCACGCTGGTCCTGGTATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGAAACGGGGCCCAGTTaGGTCCTGGGACCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLETGPS*VLGPLP
Trigger: AGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR TCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGCTGGAGAAGGTCAGGTaGTGGACGATCAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLLEKVR*WTIRDH
Trigger: GTGGTCTCTGATCGTCCATCACCTGACCTTCTCCAG...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGCCTTGTGTCAGGCCTaGTCTGGGAGATGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSALCQA*SGRCSC
Trigger: GCAGCTACATCTCCCAGATCAGGCCTGACACAAGGC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACGAAAATGGGGGACCATaGCCACCTGGCGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYENGGP*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATGGTCCCCCATTTTC...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACCTTCGGAGTCCTCCTaGCTTGACCCCCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSPSESS*LDPQVR
Trigger: CCTGACCTGGGGGTCAAGGCAGGAGGACTCCGAAGG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: QRATAPGPRSGLYTILDIACLAV*LSSSPN
Trigger: GTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTAGGGGTCTGCCTGTCTaGCCGTCTGGCTCTCGAGCT +
Preference number: 2 (lower is better)
Translates to: GAGYILSSTFRAQPAPETRGLPV*PSGSRA
Trigger: AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCT...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGTGAGAAGACAGTCCTaGAGAAGGTCAGGTGATGGA +
Preference number: 2 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGVRRQS*RRSGDG
Trigger: TCCATCACCTGACCTTCTCCAGGACTGTCTTCTCAC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCCATCCAGAGTGGAACTaGGGGCTAAGACCACGGCCA +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSHPEWN*GLRPRP
Trigger: TGGCCGTGGTCTTAGCCCCCAGTTCCACTCTGGATG...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGGCCTGAAACTACAGTaGCCCCATGGATGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSGLKLQ*PHGWWW
Trigger: CCACCACCATCCATGGGGCCACTGTAGTTTCAGGCC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCGCGGCGGCCACTTTaGCGCCCGACAGGAGGGTGC +
Preference number: 2 (lower is better)
Translates to: SGSAGFLGFAGQGYWQSHPRRPL*RPTGGC
Trigger: GCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGG...ATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR-3UTR CCA 90 bp ATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: IAAWLQILPEGLHLGQVHRVRGR*HFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCT...GTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTAAGCAGGGATCAGCCTaGAATCTGCCGTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRKQGSA*NLPSPR
Trigger: CCTTGGAGACGGCAGATTTCAGGCTGATCCCTGCTT...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGGAAAATGGGGGACCATaGCCACCTGGCGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVENGGP*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATGGTCCCCCATTTTC...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACCTGCCTCCTTTCCCTaGACTGTGAGTGAGTCGGGC +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSPASFP*TVSESG
Trigger: GCCCGACTCACTCACAGTGCAGGGAAAGGAGGCAGG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACGCCAAAGAGGAGGATaGAGTTGGGGCCGACCCCAT +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSRQRGG*SWGRPH
Trigger: ATGGGGTCGGCCCCAACTGCATCCTCCTCTTTGGCG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGGCTTTGTCACCAGCTaGGTCTTGTATCAATACCAG +
Preference number: 2 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGGFVTS*VLYQYQ
Trigger: CTGGTATTGATACAAGACCCAGCTGGTGACAAAGCC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCAGAAAATTTCGGTATaGGCAAAAGGCGACCCGTCT +
Preference number: 2 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGQKISV*AKGDPS
Trigger: AGACGGGTCGCCTTTTGCCCATACCGAAATTTTCTG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGATCCAAGAGAGGAGTaGAGAAGGGCAGATCCCCTC +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLDPREE*RRADPL
Trigger: GAGGGGATCTGCCCTTCTCCACTCCTCTCTTGGATC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCAGGCTCTGGCTGGTaGTGGGCTGGCTGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VPGFCRSGILAKSSCSESPGSGW*WAGWAA
Trigger: GGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGG...GCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGATAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 2 (lower is better)
Translates to: PVLHLPWPALPGQVDLADKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...ATCGGCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 2 (lower is better)
Translates to: GDGQSCPSSASPPLARSSQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTTCACCTACTATGTATaGTGTTCCTCCAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGFTYYV*CSSRSQ
Trigger: CTGGGATCTGGAGGAACATCATACATAGTAGGTGAA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGACCCAGGGAGTGCGGGTaGCTTGCCCAAAGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGPRECG*LAQSPG
Trigger: CCCAGGACTTTGGGCAAGTCACCCGCACTCCCTGGG...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: GAGYILSSTFRAQPAPETGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR GCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGCGCCAAAGAGGAGGATaGAGTTGGGGCCGACCCCAT +
Preference number: 2 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVRQRGG*SWGRPH
Trigger: ATGGGGTCGGCCCCAACTGCATCCTCCTCTTTGGCG...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR GCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGAGTTCCCCCATTCTCTaGTCTCCTATTGCCCTAGAC +
Preference number: 2 (lower is better)
Translates to: VKRRMGLRWPQLALEALWSSPIL*SPIALD
Trigger: GTCTAGGGCAATAGGAGAGCAGAGAATGGGGGAACT...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp AAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCAGCTGCCGCATCAGGGTaGGGGGTCGCTGGCATTTCG +
Preference number: 2 (lower is better)
Translates to: KALRPRIAPPSGLPGRISAAASG*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGC...TGAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp GTTCACGATGATGGAGTTGGCAGAGGGGTTGTAGCAGAGAGACAAGAGCAGCTCTGTTGCAGGCTCTGCTaGCGCATCAGGGTGCGGGGT +
Preference number: 2 (lower is better)
Translates to: VHDDGVGRGVVAERQEQLCCRLC*RIRVRG
Trigger: ACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACA...GAGCTGCTCTTGTCTCTCTGCTACAACCCCTCTGCCAACTCCATCATCGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGAAGGGCAGGCAAGCTaGAAAGCATGGAGAATAGGG +
Preference number: 2 (lower is better)
Translates to: ASPFGLSELPWRVASVLWEGQAS*KAWRIG
Trigger: CCCTATTCTCCATGCTTTCCAGCTTGCCTGCCCTTC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGTGGACCCCCAGGATTaGAGGCTTTGTCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSVDPQD*RLCHQL
Trigger: CAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCAC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp ATAGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCTGCCGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: IGKTFKEEGLVPVGVQVLLPPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAG...AAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 2 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGACCCCCAGGTCAGGTaGTGGTGGCCTCACAACCTC +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGDPQVR*WWPHNL
Trigger: GAGGTTGTGAGGCCACCATCACCTGACCTGGGGGTC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp GCTGAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTAACCTCTTGTCCCCCTaGGCGTTCTGGTTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: AEAVIVQDLEVEDPLHHLNLLSP*AFWFCW
Trigger: CCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTT...AAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTCCACTCCAGGTGCTaGCTTAAAGAAAATGGGGGA +
Preference number: 2 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHLHSRC*LKENGG
Trigger: TCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAG...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR GCA 90 bp AAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCATGGCTCAGCGGCTGTTaGAGGCTCTGCTGCCGCATC +
Preference number: 2 (lower is better)
Translates to: KALRPRIAPPSGLPGRISWLSGC*RLCCRI
Trigger: GATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCA...TGAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp AGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: RENLQRGRSRSSGGSGSSICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...GGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp CCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGATCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 2 (lower is better)
Translates to: PVLHLPWPALPGQVDLADQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...ATCGGCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CAA 90 bp CCTCTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: PLVPLSVLVLLGSWV*QVRDIGKVILFRKP
Trigger: GGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp TGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGCGAAATTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: CSESPKTKDSTTIRPSRKRNWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCG...CTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR-3UTR GCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGTCTGTTTCTGACCTCTaGCTCACCCGACCCCACTCA +
Preference number: 2 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVSVSDL*LTRPHS
Trigger: TGAGTGGGGTCGGGTGAGGCAGAGGTCAGAAACAGA...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAAAGGGAGATGAGTCCTaGTGGAATGCTATGCACACA +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLKGDES*WNAMHT
Trigger: TGTGTGCATAGCATTCCACCAGGACTCATCTCCCTT...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAAGAATAGGGCAGATGTaGCTGCGTATGAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSRIGQM*LRMRCG
Trigger: CCCACACCTCATACGCAGCCACATCTGCCCTATTCT...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCCAGCTTCTTTGTGTGTaGCAACCTCAGAACTCACAG +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSQLLCV*QPQNSQ
Trigger: CTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTG...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAAGAGGAGGATGCAGTTaGGGCCGACCCCATTTTAAG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSRGGCS*GRPHFK
Trigger: CTTAAAATGGGGTCGGCCCCAACTGCATCCTCCTCT...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGGGGAAGCCCAAGCCTaGTCGCTAATGTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGGEAQA*SLMCLG
Trigger: ACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GAAGGACTCATTGAAGATGGGGTTCAGGTTCCTCTTCATCGTCACCGTCTTCTTTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: EGLIEDGVQVPLHRHRLLSSWGV*PGTGAV
Trigger: CACAGCCCCCGTGCCAGGCCAGACACCCCACGATGA...AAGAAGACGGTGACGATGAAGAGGAACCTGAACCCCATCTTCAATGAGTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR TCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTATTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR GCA 90 bp ATAGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTTGGCTCAGCGGCTGTTaGAGGCTCTGCTGCCGCATC +
Preference number: 2 (lower is better)
Translates to: IGKTFKEEGLVPVGVQVLWLSGC*RLCCRI
Trigger: GATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCA...AAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR GCA 90 bp TCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SGSAGFLGFAGQGYWQSHPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...ATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATGTGGGGGATGGGGCTaGTACTTCCTAGAAACGGGG +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGCGGWG*YFLETG
Trigger: CCCCGTTTCTAGGAAGTACCAGCCCCATCCCCCACA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAAAAGGTCTACAAGCATTaGGGGATGGAGGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEKVYKH*GMEGWR
Trigger: CCTCCACCCCTCCATCCCCCAATGCTTGTAGACCTT...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCGTTCGAAGGAAAATaGTTCCCAAATGCCAATGGT +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPFEGK*FPNANG
Trigger: ACCATTGGCATTTGGGAACCATTTTCCTTCGAACGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 2 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp AGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCTGGCCGTGGACAGGGTaGAGTCCTCGAAACACGACA +
Preference number: 2 (lower is better)
Translates to: RENLQRGRSRSSGGSGSSWPWTG*SPRNTT
Trigger: TGTCGTGTTTCGAGGACTCCACCCTGTCCACGGCCA...GGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539246.5
3UTR-3UTR GCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATCTCCACTCCAGGTGCTaGCTTAAAGAAAATGGGGGA +
Preference number: 2 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHLHSRC*LKENGG
Trigger: TCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAG...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTCTCTCCACTCCAGGTaGTGCCTTAAAGAAAATGGG +
Preference number: 2 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYSLHSR*CLKENG
Trigger: CCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGA...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTCACCTGAAACTGCCCTaGGGATGGGCCTCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: TTASLCVATSELTESWSFHLKLP*GWASPG
Trigger: GCCAGGAGAGGCCCATCCCCAGGGCAGTTTCAGGTG...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAATGAGACGGAATGAATaGAAGGTCTACAAGCATTGG +
Preference number: 2 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLMRRNE*KVYKHW
Trigger: CCAATGCTTGTAGACCTTCCATTCATTCCGTCTCAT...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCATGAGACGGAATGAATaGAAGGTCTACAAGCATTGG +
Preference number: 2 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSMRRNE*KVYKHW
Trigger: CCAATGCTTGTAGACCTTCCATTCATTCCGTCTCAT...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGGCTTTGTCACCAGCTaGGTCTTGTATCAATACCAG +
Preference number: 2 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSGFVTS*VLYQYQ
Trigger: CTGGTATTGATACAAGACCCAGCTGGTGACAAAGCC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGATCCAAGAGAGGAGTaGAGAAGGGCAGATCCCCTC +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGDPREE*RRADPL
Trigger: GAGGGGATCTGCCCTTCTCCACTCCTCTCTTGGATC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISVLLGS*VLQVRD
Trigger: ATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAAC...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CAA 90 bp GCGTTCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGC +
Preference number: 2 (lower is better)
Translates to: AFWFCWVPGFCRSGI*AKSSCSESPKTKDS
Trigger: GCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGACAGAAAATTTCGGTATaGGCAAAAGGCGACCCGTCT +
Preference number: 2 (lower is better)
Translates to: GAGGICTALSWGDGHKKGQKISV*AKGDPS
Trigger: AGACGGGTCGCCTTTTGCCCATACCGAAATTTTCTG...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCAATATAGAAACATTTaGATTTACAAGGAACGTGGG +
Preference number: 2 (lower is better)
Translates to: DEAHERACDRVKRRMGLRQYRNI*IYKERG
Trigger: CCCACGTTCCTTGTAAATCCAAATGTTTCTATATTG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 90 bp AGTTTTAGTCTCATCAGTGGCCGAGGCAGAGAAACCACAGCTTCTTaGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: SFSLISGRGRETTAS*CVATSELTESWSFP
Trigger: GGGAAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTCTCTGCCTCGGCCACTGATGAGACTAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR TCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTTTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: TTASLCVATSELTESWSFLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 90 bp GGCCTTGCCACAAAAAGCAGGGCCCATTCCCACAAAAATATGATTTaGCAAAGAGGAAATCTTGCTGGCTTAGAGGGTATGTGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: GLATKSRAHSHKNMI*QRGNLAGLEGMCGG
Trigger: TCCACCACACATACCCTCTAAGCCAGCAAGATTTCCTCTTTGCAAAATCATATTTTTGTGGGAATGGGCCCTGCTTTTTGTGGCAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR GCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTTCTCTCCACTCCAGGTaGTGCCTTAAAGAAAATGGG +
Preference number: 2 (lower is better)
Translates to: TTASLCVATSELTESWSFSLHSR*CLKENG
Trigger: CCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGA...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTACTTaGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: GWSGCGPLPPGT*SRPRCPAEPGP
Trigger: GGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTCCGGGTaGCGGCACCGGTGCCGGCTTCTCCCCCAGCCGGCC +
Preference number: 3 (lower is better)
Translates to: GSPAASQGVLSG*RHRCRLLPQPA
Trigger: GGCCGGCTGGGGGAGAAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCCTTGAGAAGCGGCGGGGCTGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 72 bp AGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACTaGGCGGTCTTCCGCGGGGCAGGCGGGTGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RAKAPGRWGLAH*AVFRGAGGWWG
Trigger: CCCCCACCACCCGCCTGCCCCGCGGAAGACCGCCCAGTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp CCTGCCGAGCCTGGCCCCGGCCATAGGCCCGGGGGTTaGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PAEPGPGHRPGG*GLVPRPCGPAA
Trigger: AGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCTATGGCCGGGGCCAGGCTCGGCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 72 bp GCTTCTCAAGGCGTCCTCTCCGGGTGGCGGCACCGGTaGCGGCTTCTCCCCCAGCCGGCCTTCCCGCTCCAC +
Preference number: 3 (lower is better)
Translates to: ASQGVLSGWRHR*RLLPQPAFPLH
Trigger: GTGGAGCGGGAAGGCCGGCTGGGGGAGAAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCCTTGAGAAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR GCA 72 bp CTCGGTTTCGAATCTGCCCCACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGCGGCCCCCTGCCGCCC +
Preference number: 3 (lower is better)
Translates to: LGFESAPPRGPS*LGWSGCGPLPP
Trigger: GGGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAACCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GCTCACTGGGCGGTCTTCCGCGGGGCAGGCGGGTGGTaGGGGGACAGGAAACCGAGGCGGATCCAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: AHWAVFRGAGGW*GDRKPRRIQER
Trigger: CCTCTCTTGGATCCGCCTCGGTTTCCTGTCCCCCCACCACCCGCCTGCCCCGCGGAAGACCGCCCAGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GTTTCGAATCTGCCCCACCACGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTA +
Preference number: 3 (lower is better)
Translates to: VSNLPHHVVPAA*VGAAAAPCRPV
Trigger: TACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGATTCGAAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCACCGCCTTCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: GPAVGLIVGCLA*HGGCVHRLPSC
Trigger: GCAGGAGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTGTTCACCGCCTTCCCT +
Preference number: 3 (lower is better)
Translates to: GSVRRSDSSWGV*PGTGAVFTAFP
Trigger: AGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 72 bp TCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTaGCGCCCCAACATAGCATCCCAGAGCTCCACCTGC +
Preference number: 3 (lower is better)
Translates to: SRASLPGPRPTA*RPNIASQSSTC
Trigger: GCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 72 bp CCCCGCTGGTGCTGGCTCAGCGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTC +
Preference number: 3 (lower is better)
Translates to: PRWCWLSGCCRL*CRIRVRGRWHF
Trigger: GAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAGCACCAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACGGGGGCTGTGTTCACC +
Preference number: 3 (lower is better)
Translates to: EERGSVRRSDSS*GVWPGTGAVFT
Trigger: GGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 72 bp TTGGACAAGTTGAGCTTCCCTGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: LDKLSFPAARWL*TVRQRPLPALP
Trigger: TGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 72 bp GGGAGCCGTTGCCCCGCCCACTCGATACAAGTTGGTTaGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: GSRCPAHSIQVG*IPRAKAPGRWG
Trigger: CCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATCGAGTGGGCGGGGCAACGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp CCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGCTaGGGAAGCCCAAGCCTGGTCGCTAATGTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PELHLHVVVVGR*GSPSLVANVPG
Trigger: CCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGAGCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CAA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCCCACTCGATACAAGTaGGTTGGATCCCCAGGGCGA +
Preference number: 3 (lower is better)
Translates to: TTLTSRASLPGPRPTACRPTRYK*VGSPGR
Trigger: TCGCCCTGGGGATCCAACCAACTTGTATCGAGTGGG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTaGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTA +
Preference number: 3 (lower is better)
Translates to: AHLAGLWRGLPV*PSGSRAPPTSL
Trigger: TAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR CCA 72 bp TCGAAATTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAGCGGCCTCTCCCCGCC +
Preference number: 3 (lower is better)
Translates to: SKLDKLSFPAAR*LCTVRQRPLPA
Trigger: GGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 72 bp TGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGAC +
Preference number: 3 (lower is better)
Translates to: CRLCCRIRVRGR*HFGSPVELGID
Trigger: GTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp GGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAG +
Preference number: 3 (lower is better)
Translates to: GLPGTGNHVLPVLHLPWPSLVRE*TRSETE
Trigger: CTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGA...GGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 72 bp GGTGGAGTCCTCGAAATTGGACAAGTTGAGCTTCCCTaGGGCCAGGTGGCTCTGCACCGTCCGCCAGCGGCC +
Preference number: 3 (lower is better)
Translates to: GGVLEIGQVELP*GQVALHRPPAA
Trigger: GGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR CCA 72 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTaGAAGGTGGGGGCTGGCTCACTGGGCGGTCTTCCG +
Preference number: 3 (lower is better)
Translates to: DTSWLDPQGEGA*KVGAGSLGGLP
Trigger: CGGAAGACCGCCCAGTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTaGCCTCAGCTAGCTCTGGAGGCTCTGTGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: ACDRVKRRMGLR*PQLALEALWGR
Trigger: CCTCCCCCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GATGGGGTACTTAGTGCAGCTCCGGGAGGCAGCTGCTaGCCCCAAGTGCTGGGAGCAGAGGGCGGATGGGAT +
Preference number: 3 (lower is better)
Translates to: DGVLSAAPGGSC*PQVLGAEGGWD
Trigger: ATCCCATCCGCCCTCTGCTCCCAGCACTTGGGGCCAGCAGCTGCCTCCCGGAGCTGCACTAAGTACCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CAA 90 bp GCTGAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: AEAVIVQDLEVEDPLHHLAAAAT*APDRRV
Trigger: CACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGC...AAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
3UTR TCA 72 bp CATGAGCATCTCGCTGGTGAGGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTCGGTCCGGCGGTCGGA +
Preference number: 3 (lower is better)
Translates to: HEHLAGEGVDEV*DGGTWLGPAVG
Trigger: TCCGACCGCCGGACCGAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGAGATGCTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp CCCTCCCCGGGTCCACATCGGGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGTGCTGCCTTAAAGAAA +
Preference number: 3 (lower is better)
Translates to: PSPGPHRGLERE*PLSTPGAALKK
Trigger: TTTCTTTAAGGCAGCACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGACCCGGGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR CCA 72 bp ATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTaGGGCGCTGGGGAAGCCCAAGCCTGGTCGCTAATG +
Preference number: 3 (lower is better)
Translates to: IASQSSTCTWWW*GAGEAQAWSLM
Trigger: CATTAGCGACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp AACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTaGTGGGGCGCTGGGGAAGCCCAAGCCTGGTCGCTA +
Preference number: 3 (lower is better)
Translates to: NIASQSSTCTWW*WGAGEAQAWSL
Trigger: TAGCGACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CAA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CAA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCCGTGGACCCCCAGGATaGGAGGCTTTGTCACCAGCT +
Preference number: 3 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGRGPPG*EALSPA
Trigger: AGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACG...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CAA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCTCGATACAAGTTGGTaGGATCCCCAGGGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGLDTSW*DPQGEG
Trigger: GCCTTCGCCCTGGGGATCCAACCAACTTGTATCGAG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CAA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCGAAACCACAGCTTCTTaGTGTGTGGCAACCTCAGAA +
Preference number: 3 (lower is better)
Translates to: TTLTSRASLPGPRPTACRETTAS*CVATSE
Trigger: TTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTC...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GCCCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTaGTTGGGAAGAGACCCCTGCCAGGAGATGCTCTCT +
Preference number: 3 (lower is better)
Translates to: AQAWSLMCLGGV*LGRDPCQEMLS
Trigger: AGAGAGCATCTCCTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp TTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTaGGAACTGAGGGAGGGGACGTCAGGCTGGGTGACC +
Preference number: 3 (lower is better)
Translates to: LSELPWRVASVL*ELREGTSGWVT
Trigger: GGTCACCCAGCCTGACGTCCCCTCCCTCAGTTCCCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp GGAAGGAGGCGCTGGCCTGAAACTACAGTGGCCCCATaGATGGTGGTGGGAAAGCTGGAGCGTCCCCCTTTG +
Preference number: 3 (lower is better)
Translates to: GRRRWPETTVAP*MVVGKLERPPL
Trigger: CAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATGGGGCCACTGTAGTTTCAGGCCAGCGCCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp AGGGACCAGGAAGGAGGCGCTGGCCTGAAACTACAGTaGCCCCATGGATGGTGGTGGGAAAGCTGGAGCGTC +
Preference number: 3 (lower is better)
Translates to: RDQEGGAGLKLQ*PHGWWWESWSV
Trigger: GACGCTCCAGCTTTCCCACCACCATCCATGGGGCCACTGTAGTTTCAGGCCAGCGCCTCCTTCCTGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CAA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: GAGYILSSTFRAQPAPETRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CAA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR-3UTR CAA 90 bp GGTCTGCATCTGGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCCCCAATCTGGCTCAGCGGCTGTaGCAGGCTCTGCTGCCGCAT +
Preference number: 3 (lower is better)
Translates to: GLHLGQVHLVKGDGHLPNLAQRL*QALLPH
Trigger: ATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG...ATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp CTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCTACCTGCCGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: LGFAGQGYWQSHPVPKALPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGG...TAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 72 bp TTGCTCACGGGTAGCACCTTCGGAGTCCTCCTGCCTTaGCCCCCAGGTCAGGTGATGGTGGCCTCACAACCT +
Preference number: 3 (lower is better)
Translates to: LLTGSTFGVLLP*PPGQVMVASQP
Trigger: AGGTTGTGAGGCCACCATCACCTGACCTGGGGGTCAAGGCAGGAGGACTCCGAAGGTGCTACCCGTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 72 bp AGATGGTCTGGGGAGCCACGAGCTGGGGCATCGGCGTaGTCAAGGCTTGTCCTTCTGGTTGTCTTTGCGTGG +
Preference number: 3 (lower is better)
Translates to: RWSGEPRAGASA*SRLVLLVVFAW
Trigger: CCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCAGACCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp GGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGT +
Preference number: 3 (lower is better)
Translates to: GGPLEGSACLAV*LSSSPNFFSIS
Trigger: ACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
3UTR CCA 72 bp GCTGGAGCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTaGAGGGTGGCAAGTGTCCTCTGGGAACTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: AGASPFGLSELP*RVASVLWELRE
Trigger: CTCCCTCAGTTCCCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGCTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp GGAGGCGCTGGCCTGAAACTACAGTGGCCCCATGGATaGTGGTGGGAAAGCTGGAGCGTCCCCCTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: GGAGLKLQWPHG*WWESWSVPLWF
Trigger: AAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATGGGGCCACTGTAGTTTCAGGCCAGCGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp CTTCACGGGAAACAGATGGTCTGGGGAGCCACGAGCTaGGGCATCGGCGTGCTCAAGGCTTGTCCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: LHGKQMVWGATS*GIGVLKACPSG
Trigger: ACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCAGACCATCTGTTTCCCGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp GAGCAGCTCCCCTCGGCTCCCACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGT +
Preference number: 3 (lower is better)
Translates to: EQLPSAPTPIAA*LQILPEGLHLG
Trigger: ACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGAGCCGAGGGGAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 3 (lower is better)
Translates to: GDGQSCPSSASPPLARSSVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp GGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCTTGAGGTTCCGGGCTTaGATGATGTTCACGATGATG +
Preference number: 3 (lower is better)
Translates to: GLPGTGNHVLPVLHLPWPLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCCCGGAACCTCAA...GGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR GCA 72 bp CCCACAAAGATGGCAGACGAAGCCCATGAAAGGGCCTaGGACAGAGTGAAGAGACGGATGGGCCTGCGTTGG +
Preference number: 3 (lower is better)
Translates to: PTKMADEAHERA*DRVKRRMGLRW
Trigger: CCAACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTCTGCCATCTTTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR-3UTR CAA 90 bp AGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCTGGCTCAGCGGCTGTaGCAGGCTCTGCTGCCGCAT +
Preference number: 3 (lower is better)
Translates to: SHPVPKALRPRIAPPSGLLAQRL*QALLPH
Trigger: ATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG...AAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 72 bp GTGCCTGTGTCTGAACCAGATGTAGCACCTTCCTTCTaGAGTACCCTGAGAGCTGCGGGGGCTCAGCTTCCC +
Preference number: 3 (lower is better)
Translates to: VPVSEPDVAPSF*STLRAAGAQLP
Trigger: GGGAAGCTGAGCCCCCGCAGCTCTCAGGGTACTTCAGAAGGAAGGTGCTACATCTGGTTCAGACACAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp CGTTCCAGTGGGGGTTCAGGTTCTTCCGCTTCACCTTaGTCTCCAGCTTGTGCTTCTTGTCGGGCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: RSSGGSGSSASP*SPACASCRAAG
Trigger: ACCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAACCTGAACCCCCACTGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GCATTTCCAGGCCTCTGTCCCCACGCACACACACAATaGACACAACACGAGTACAAAGGGCCACAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: AFPGLCPHAHTQ*TQHEYKGPQLQ
Trigger: CTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCATTGTGTGTGTGCGTGGGGACAGAGGCCTGGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GGGAATGTCAGGCCCAGGCTCGTGGACCCCCAGGATTaGAGGCTTTGTCACCAGCTGGGTCTTGTATCAATA +
Preference number: 3 (lower is better)
Translates to: GNVRPRLVDPQD*RLCHQLGLVSI
Trigger: TATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp TTCCCAAATGCCAATGGTCTCCCCACGCCCTGGATGTaGGGACCCTATCCAGAGTCCCCTTCTTCTCTTTGG +
Preference number: 3 (lower is better)
Translates to: FPNANGLPTPWM*GPYPESPSSLW
Trigger: CCAAAGAGAAGAAGGGGACTCTGGATAGGGTCCCCACATCCAGGGCGTGGGGAGACCATTGGCATTTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 72 bp GGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTaGTCACGGGTAGCACCTTCGGAGTCCTCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: GGPCSQDSVITL*SRVAPSESSCL
Trigger: AAGGCAGGAGGACTCCGAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR GCA 72 bp GAGCTGTCTCTGACTTCAGGCTCAGTTTTCCAGGGCTaGTTTCATGGAGAGCGCCTGAACAGAAGCTCTGGC +
Preference number: 3 (lower is better)
Translates to: ELSLTSGSVFQG*FHGERLNRSSG
Trigger: GCCAGAGCTTCTGTTCAGGCGCTCTCCATGAAAGCAGCCCTGGAAAACTGAGCCTGAAGTCAGAGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR GCA 72 bp CCATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACCTTGTTAAGGGGGATG +
Preference number: 3 (lower is better)
Translates to: PSLHGFRSFQKV*IWVRSTLLRGM
Trigger: CATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CCA 72 bp GACGATCAGAGACCACGCACGATGAGACGGAATGAATaGAAGGTCTACAAGCATTGGGGGATGGAGGGGTGG +
Preference number: 3 (lower is better)
Translates to: DDQRPRTMRRNE*KVYKHWGMEGW
Trigger: CCACCCCTCCATCCCCCAATGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp TCTGACTTCAGGCTCAGTTTTCCAGGGCTGCTTTCATaGAGAGCGCCTGAACAGAAGCTCTGGCCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: SDFRLSFPGLLS*RAPEQKLWPRE
Trigger: CTCCCTTGGCCAGAGCTTCTGTTCAGGCGCTCTCCATGAAAGCAGCCCTGGAAAACTGAGCCTGAAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp CTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTAAGGGGGATGGACACC +
Preference number: 3 (lower is better)
Translates to: LHGFRSFQKVCI*VRSTLLRGMDT
Trigger: GGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp GGTCTGCATCTGGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCCCCAATTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 3 (lower is better)
Translates to: GLHLGQVHLVKGDGHLPNCRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...ATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 72 bp GATGGACGATCAGAGACCACGCACGATGAGACGGAATaGATGGAAGGTCTACAAGCATTGGGGGATGGAGGG +
Preference number: 3 (lower is better)
Translates to: DGRSETTHDETE*MEGLQALGDGG
Trigger: CCCTCCATCCCCCAATGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR TCA 72 bp CTGGGTCTTGTATCAATACCAGGACCAGCGTGGGGATaGGAGGGCTTAAGCAGGGATCAGCCTGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: LGLVSIPGPAWG*EGLSRDQPEIC
Trigger: GCAGATTTCAGGCTGATCCCTGCTTAAGCCCTCTCATCCCCACGCTGGTCCTGGTATTGATACAAGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR TCA 72 bp TCTGGGAAGCCAGTGGGATCATATTCTATAGAGATCTaGGGATGGCTGGACACTCGGGAAGGGCCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: SGKPVGSYSIEI*GWLDTREGPGH
Trigger: GTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAATATGATCCCACTGGCTTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp AGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTaGTCACCAGTGAAGTCAAATCCCAAAGGTGACACA +
Preference number: 3 (lower is better)
Translates to: RDLRMAGHSGRA*SPVKSNPKGDT
Trigger: TGTGTCACCTTTGGGATTTGACTTCACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CCA 72 bp CTTGTCCCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATC +
Preference number: 3 (lower is better)
Translates to: LVPLSVLVLLGS*VLQVRDIGKVI
Trigger: GATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGGGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR-3UTR CAA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCATGGTTATTGCTTTGTaGTGGCCAGAAGAAACAGGT +
Preference number: 3 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSMVIAL*WPEETG
Trigger: ACCTGTTTCTTCTGGCCACAACAAAGCAATAACCAT...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CAA 90 bp AGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGC +
Preference number: 3 (lower is better)
Translates to: RENLQRGRSRSSGGSGSSLGSWV*QVRDIG
Trigger: GCCAATATCCCTGACCTGCAAAACCCAGGAACCCAG...GGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR TCA 72 bp AGAGGACTCTACTCCCAAAAAGCCTTGTGTCAGGCCTaGTCTGGGAGATGTAGCTGCCTCTCTGCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: RGLYSQKALCQA*SGRCSCLSAFW
Trigger: CCAGAAAGCAGAGAGGCAGCTACATCTCCCAGATCAGGCCTGACACAAGGCTTTTTGGGAGTAGAGTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CAA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGAACGTGGGTGACTATTaGCTTTACATTAGCATTCTT +
Preference number: 3 (lower is better)
Translates to: VKRRMGLRWPQLALEALWNVGDY*LYISIL
Trigger: AAGAATGCTAATGTAAAGCAAATAGTCACCCACGTT...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CCA 72 bp GTGGCCGAGGCAGAGAAACCACAGCTTCTTTGTGTGTaGCAACCTCAGAACTCACAGAATCCTGGTCTTTTC +
Preference number: 3 (lower is better)
Translates to: VAEAEKPQLLCV*QPQNSQNPGLF
Trigger: GAAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTCTCTGCCTCGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR TCA 72 bp CAATGGGGATGTGCTCGTTCCTTTTGTGCCTGTGTCTaGACCAGATGTAGCACCTTCCTTCTGAAGTACCCT +
Preference number: 3 (lower is better)
Translates to: QWGCARSFCACV*TRCSTFLLKYP
Trigger: AGGGTACTTCAGAAGGAAGGTGCTACATCTGGTTCAGACACAGGCACAAAAGGAACGAGCACATCCCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR-3UTR CAA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGTTCAAGAGATGAAATaGCTGAGGAGGGAACTACTT +
Preference number: 3 (lower is better)
Translates to: TTASLCVATSELTESWSFVQEMK*LRRELL
Trigger: AAGTAGTTCCCTCCTCAGCAATTTCATCTCTTGAAC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR TCA 72 bp ATTCTTCACTCTACAAAACGATTCACCTACTATGTATaGTGTTCCTCCAGATCCCAGGGAGAGGAAATGGTG +
Preference number: 3 (lower is better)
Translates to: ILHSTKRFTYYV*CSSRSQGEEMV
Trigger: CACCATTTCCTCTCCCTGGGATCTGGAGGAACATCATACATAGTAGGTGAATCGTTTTGTAGAGTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp GGGTTGGAGCGGCTGCGGCCCCCTGCCGCCCGGTACTaGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLERLRPPAARY*EPAEVPCRAWP
Trigger: GGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAGCCGCTCCAACCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGGGCTCTGGCTGGTGGTaGGCTGGCTGGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RPPAARYLEPAEVPCRAWGSGWW*AGWAAG
Trigger: GCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCC...CCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGCGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCCTGCCGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LRPPAARYLEPAEVPCRALPPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAG...GGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCTTCAGCTGGTGCCACTaGGCCACGGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PPAARYLEPAEVPCRAWPFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCCGTGGCCCAGTGGCACCAGCTGAA...GGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PPAARYLEPAEVPCRAWPVGCLA*HGGCVH
Trigger: GTGAACACAGCCCCCGTGCCAGGCCAGACACCCCAC...GGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGCGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LRPPAARYLEPAEVPCRASSWGV*PGTGAV
Trigger: CACAGCCCCCGTGCCAGGCCAGACACCCCACGATGA...GGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCCTGCGCGCCGCGTGTaGGCGCCGGAGCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPPARRV*APERVC
Trigger: ACACACACGCTCCGGCGCGCACACGCGGCGCGCAGG...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACCGCGGCGGCCACTTTaGCGCCCGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRPRRPL*RPTGGC
Trigger: GCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCGGCGTCCTCTCCGGGTaGCGGCACCGGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPGVLSG*RHRCRL
Trigger: AAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCC...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGGCTCTGGCTGGTGGTaGGCTGGCTGGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRGSGWW*AGWAAG
Trigger: GCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCC...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPPAARYLEPAEVPCRAWGVDEV*DGGTWL
Trigger: GAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCC...CCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGCACGGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ERGSVRRSDSSWGVWPGTAARWL*TVRQRP
Trigger: AGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGC...CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp CCACCGCTGCCCGGCTCGCTGGGGGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLPGSLGAAPPLLKASSSSWGV*PGTGAV
Trigger: CACAGCCCCCGTGCCAGGCCAGACACCCCACGATGA...AGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCGAGCCGGGCAGCGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGTCCTCCCCTCCCTATaGCAGGGGGCTCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRVLPSL*QGAQAG
Trigger: CCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGAC...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGGGACCATGCCCACCTaGCGGGCCTCTGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRGTMPT*RASGGV
Trigger: GACCCCTCCAGAGGCCCGCCAGGTGGGCATGGTCCC...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGGGATGGGCCTCTCCTaGCCAGGCCGGGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRGMGLS*PGRGQT
Trigger: CGTTTGGCCCCGGCCTGGCCAGGAGAGGCCCATCCC...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCGCGGCGGCCACTTTGGCGCCCGACAGGAGGGTGCCACACGACAACGGAGGGGTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PRRPLWRPTGGCHTTTEGFPAAR*LCTVRQ
Trigger: CTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAA...CCCCTCCGTTGTCGTGTGGCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR TCA 90 bp GAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGCACGACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGT +
Preference number: 4 (lower is better)
Translates to: ERGSVRRSDSSWGVWPGTTAPTP*VWRAHR
Trigger: ACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGT...CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGATCATGTCCTTCCAGTaGTTCACCTCCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPAARYLEPAEVPCRAWIMSFQ*FTSPGP
Trigger: CGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGAT...CCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCACTGGGCCACGGGCTaGCGGGGACGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPHWATG*RGRAIM
Trigger: CATGATTGCCCGTCCCCGGCAGCCCGTGGCCCAGTG...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCACCGCTGCCCGGCTCGCTGGGGGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PPLPGSLGAAPPLLKASSVLHLP*PALPGQ
Trigger: CTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCAC...AGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCGAGCCGGGCAGCGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCTTCAGCTGGTGCCACTaGGCCACGGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCCGTGGCCCAGTGGCACCAGCTGAA...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCTGGGACCCCTCCCTaGCTGAGCCCTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPPGTPP*LSPQGP
Trigger: AGGACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGG...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTGGTGGTGGGCTGGCTaGGCTGCCGGCCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GCCRLCCRIRVRGRWHFGWWWAG*AAGPAG
Trigger: ACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCA...GCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCTGGCCGTGGACAGGGTaGAGTCCTCGAAACACGACA +
Preference number: 4 (lower is better)
Translates to: PPAARYLEPAEVPCRAWPWPWTG*SPRNTT
Trigger: TGTCGTGTTTCGAGGACTCCACCCTGTCCACGGCCA...GGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539246.5
CDS-3UTR TCA 90 bp AGGCCCGGGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCTGGCCCAGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPGGWGLVPRPCGPAAGPGVDEV*DGGTWL
Trigger: GAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCC...TGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCTCCCAGAGCTCCACCTaGACGTGGTGGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPSQSST*TWWWWG
Trigger: GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGA...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTGAGGCCATGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAEAMWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTC...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATCCACCTGCACGTGGTaGTGGTGGGGCGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRSTCTW*WWGAGE
Trigger: TTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCCAGGCTCTGGCTGGTaGTGGGCTGGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPPGSGW*WAGWAA
Trigger: GGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGG...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGCGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRPPAARYLEPAEVPCRAAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...GGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCAAGGGCCCGAGCCAGTaGCAAGGGACTGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPKGPSQ*QGTAPC
Trigger: ACAGGGGGCAGTCCCTTGCCACTGGCTCGGGCCCTT...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGGGAGGAAGAGCGGGTTaGGGGACAGTCGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GGTWLGPAVGLIVGCLAWGGRAG*GTVVGR
Trigger: GCGACCCACGACTGTCCCTCAACCCGCTCTTCCTCC...CCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp AGGCCCGGGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCTGGCCCAAACCTCTTGTCCCCCTaGGCGTTCTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPGGWGLVPRPCGPAAGPNLLSP*AFWFCW
Trigger: CCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTT...TGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCCGGCCATAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PPGTWSRPRCPAEPGPGHSVCPV*ADTSGR
Trigger: TCTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...ATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCCACTGGGCCACGGGCTaGCGGGGACGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: GCCRLCCRIRVRGRWHFGHWATG*RGRAIM
Trigger: CATGATTGCCCGTCCCCGGCAGCCCGTGGCCCAGTG...GCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCTGCCGCATCAGGGTaGGGGGTCGCTGGCATTTCG +
Preference number: 4 (lower is better)
Translates to: LAQRLLQALLPHQGAGSLAAASG*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGC...CAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCCCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLPGTGNHVLPVLHLPWPPRGPS*LGWSGC
Trigger: GCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGG...GGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCTTCAGCTGGTGCCACTaGGCCACGGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCCGTGGCCCAGTGGCACCAGCTGAA...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLACLAV*LSSSPN
Trigger: GTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGC...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCACGGCCACAGACTGTaGGGGCCTGGCGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGHGHRL*GPGATW
Trigger: CCAGGTGGCGCCAGGCCCCCACAGTCTGTGGCCGTG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCCCTTCCCTGGCATCTaGTGCCAGAGGGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLPFPGI*CQRAGA
Trigger: CGCACCTGCCCTCTGGCACCAGATGCCAGGGAAGGG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCTTCCCTGGCATCTaGTGCCAGAGGGCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAPFPGI*CQRAGA
Trigger: CGCACCTGCCCTCTGGCACCAGATGCCAGGGAAGGG...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGGCCCAGGCTCTGGCTaGTGGTGGGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGGPGSG*WWAGWA
Trigger: AGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACCTGCCGCCCGGTACTTaGAGCCGGCCGAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHLPPGT*SRPRCP
Trigger: AGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAG...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTGGAGCAGAGGGCGGATaGGATGGCCCGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAGAEGG*DGPLHS
Trigger: GGAGTGAAGCGGGCCATCCCATCCGCCCTCTGCTCC...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp CTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGTTGCCCAGTTTGCGCTaGCACCAGTGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LAQRLLQALLPHQGAGSLLPSLR*HQWQRP
Trigger: CGGCCTCTGCCACTGGTGTCAGCGCAAACTGGGCAA...CAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGGTCGCTGGTGCCGCTaGAGTCCTTGGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGGRWCR*SPWPAA
Trigger: AGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCGGCAGACGAAGCCCATaGAAGGGCCTGCGACAGAGT +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPGRRSP*KGLRQS
Trigger: ACTCTGTCGCAGGCCCTTTCATGGGCTTCGTCTGCC...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPALSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGC...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CCACCGCTGCCCGGCTCGCTGGGGGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTTTGGTCTCCAGCTTGTaGTTCTTGTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLPGSLGAAPPLLKASSLVSSL*FLSGSR
Trigger: CCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAA...AGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCGAGCCGGGCAGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCTGGCTCAGCGGCTGTTaGAGGCTCTGCTGCCGCATC +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLWLSGC*RLCCRI
Trigger: GATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCA...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGTGCCGGCCCCGCTGGTaGTGGCTCAGCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWCRPRW*WLSGCC
Trigger: GCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCA...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CTGCGGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGGTTCCTGGGTTTTaGAGGTCAGGGATATTGGCA +
Preference number: 4 (lower is better)
Translates to: LRPPAARYLEPAEVPCRAWVPGF*RSGILA
Trigger: TGCCAATATCCCTGACCTGCAAAACCCAGGAACCCA...GGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCTGGGTTCCTGGGTTTTaGAGGTCAGGGATATTGGCA +
Preference number: 4 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGWVPGF*RSGILA
Trigger: TGCCAATATCCCTGACCTGCAAAACCCAGGAACCCA...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTGCTCCGGGAGGCAGCTaGTGGCCCCAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGAPGGS*WPQVLG
Trigger: TCCCAGCACTTGGGGCCAGCAGCTGCCTCCCGGAGC...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCCGGGTCCCGGTACATaGTCCCCTCGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGPGPGT*SPRRRF
Trigger: GAACCGGCGACGAGGGGACCATGTACCGGGACCCGG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCCGCCGCGGCGGCCACTTTGGCGCCCGACAGGAGGGTGCCACACGACAACGGACCCTCAGCTTCTCCGTaGGGATATCGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PAAAATLAPDRRVPHDNGPSASP*GYRRRR
Trigger: CCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGG...TCCGTTGTCGTGTGGCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCGGATGGGCCTGCGTTaGCCTCAGCTAGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRARMGLR*PQLALE
Trigger: CTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCG...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPRVRGR*HFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCT...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCCCAGGCTCTGGCTGGTaGTGGGCTGGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGPGSGW*WAGWAA
Trigger: GGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGG...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCCTGAACAGAAGCTCTaGCCAAGGGAGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPPEQKL*PREPLR
Trigger: CCTCAGGGGCTCCCTTGGCCAGAGCTTCTGTTCAGG...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCTGGTTGTCTTTGCGTaGGAGGGAGAGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRLVVFA*EGEERR
Trigger: CCTGCGCTCCTCTCCCTCCCACGCAAAGACAACCAG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCAGTTGTAGCCGACACTaGACTGGATCCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRSCSRH*TGSGPG
Trigger: ACCTGGGCCGGATCCAGTTCAGTGTCGGCTACAACT...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCGGTCGCTGGTGCCGCTaGAGTCCTTGGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GDGQSCPSSASPPLARSSGRWCR*SPWPAA
Trigger: AGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACC...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACCTTTCCCTGCACTGTaGGTGAGTCGGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRPFPAL*VSRAEG
Trigger: TCCTTCTGCCCGACTCACTCACAGTGCAGGGAAAGG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCGCAACTTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WRASGGVCLSGRLALELPATWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGC...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCTGGCCCAGGCTCTGTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GVGAWCRGHVGLQLAQALSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...CAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTCTCGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VAGSAAASGCGVAGISALGCCRL*CRIRVR
Trigger: CCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC...GAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCATGCCGGCCCCGCTGGTaGTGGCTCAGCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GTGNHVLPVLHLPWPALPCRPRW*WLSGCC
Trigger: GCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCA...TGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACCTTCTGGTTGTCTTTaGGTGGGAGGGAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRPSGCL*VGGRGA
Trigger: CGCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGGCCACGGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GPRAAGDGQSCPSSASPPVLHLP*PALPGQ
Trigger: CTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCAC...GGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCCGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGGCATGATGGGGACCTaGGCCCTCGGCCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHGMMGT*ALGPLG
Trigger: GCCCAGGGGGCCGAGGGCCCAGGTCCCCATCATGCC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKACLAV*LSSSPN
Trigger: GTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGC...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCGTGGACCCCCAGGATTaGAGGCTTTGTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPVDPQD*RLCHQL
Trigger: CAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCAC...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCCAGGGCGAAGGCGCCTaGAAGGTGGGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGQGEGA*KVGAGS
Trigger: TGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTG...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCGTGGTGGTGGGGCGCTaGGGAAGCCCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGVVVGR*GSPSLV
Trigger: GACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCAC...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGGCCGTGGACTGGTGGTGGGCTGGCTaGGCTGCCGGCCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HFGSPVELGIDSRVVAVDWWWAG*AAGPAG
Trigger: ACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCA...GTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGT +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHTAPTP*VWRAHR
Trigger: ACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCCCAGGGAGTGCGGGTaGCTTGCCCAAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWPRECG*LAQSPG
Trigger: CCCAGGACTTTGGGCAAGTCACCCGCACTCCCTGGG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAAGTTGAGCTTCCCTGCGGCCAGGTGGCTCTGCACCGTCCGCCAGCGGCCTCTGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QVELPCGQVALHRPPAASALSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGC...AGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR GCA 90 bp CAAGTTGAGCTTCCCTGCGGCCAGGTGGCTCTGCACCGTCCGCCAGCGGCCTCTCCAGGTTCTCTCGGCTaGAACCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QVELPCGQVALHRPPAASPGSLG*NPRGPH
Trigger: ATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGG...AGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR GCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCTTGGTCTCCAGCTTGTaGTTCTTGTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRLVSSL*FLSGSR
Trigger: CCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAA...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTATCATGTCCTTCCAGTaGTTCACCTCCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAIMSFQ*FTSPGP
Trigger: CGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGAT...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCTGCAGCAAGCAGAATaGTCAGCTCAAGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRLQQAE*SAQGEA
Trigger: GGCTTCCCCTTGAGCTGAGCATTCTGCTTGCTGCAG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGAGGCCATGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTGNHVLPVLHLPWPALPEAMWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTC...TGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTCTCCCCCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CRLCCRIRVRGRWHFGSPPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...GGGAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTTGTGGGGGATGGGGCTaGTACTTCCTAGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRACGGWG*YFLETG
Trigger: CCCCGTTTCTAGGAAGTACCAGCCCCATCCCCCACA...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKGLERE*PLSTPG
Trigger: ACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCC...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCACCTGAAACTGCCCTaGGGATGGGCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGHLKLP*GWASPG
Trigger: GCCAGGAGAGGCCCATCCCCAGGGCAGTTTCAGGTG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCATCCAGAGTGGAACTaGGGGCTAAGACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLHPEWN*GLRPRP
Trigger: TGGCCGTGGTCTTAGCCCCCAGTTCCACTCTGGATG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCTCCCCTTCTTCTCTTTaGGGTGTCACAGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPSPSSL*GVTGPS
Trigger: GGATGGGCCTGTGACACCCCAAAGAGAAGAAGGGGA...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCCCACGCCCTGGATGTaGGGACCCTATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGPTPWM*GPYPES
Trigger: GGACTCTGGATAGGGTCCCCACATCCAGGGCGTGGG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGGGGCAGGCGGGTGGTaGGGGGACAGGAAACCGAGG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHGAGGW*GDRKPR
Trigger: CCTCGGTTTCCTGTCCCCCCACCACCCGCCTGCCCC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTGCCTGGGTGGGGTCTaGTTGGGAAGAGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGCLGGV*LGRDPC
Trigger: GCAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCGGATGGGCCTGCGTTaGCCTCAGCTAGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGRMGLR*PQLALE
Trigger: CTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCAGGTGCGGGGGTCCTaGGGCGGGTGGAATTTGTAC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGQVRGS*GGWNLY
Trigger: GTACAAATTCCACCCGCCCCAGGACCCCCGCACCTG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATGGCGTCCTCTCCGGGTaGCGGCACCGGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYGVLSG*RHRCRL
Trigger: AAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCC...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGAGGTGAGGGAGGGCTaGGACCCACGGAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGEVREG*DPRRKQ
Trigger: CTGTTTCCTCCGTGGGTCCCAGCCCTCCCTCACCTC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACAGAGGGCGGATGGGATaGCCCGCTTCACTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHRGRMG*PASLLV
Trigger: CACCAGGAGTGAAGCGGGCCATCCCATCCGCCCTCT...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCTTCACGGGAAACAGATaGTCTGGGGAGCCACGAGCT +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPFTGNR*SGEPRA
Trigger: AGCTCGTGGCTCCCCAGACCATCTGTTTCCCGTGAA...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCCTGGGCGTGCCACATaGAACATGTATGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRPGRAT*NMYADR
Trigger: CCTGTCTGCATACATGTTCCATGTGGCACGCCCAGG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp GGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTaGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLRQSEETDGPA*ASASSGGSVGE
Trigger: CTCCCCCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGTTGCCCAGTTTGCGCTaGCACCAGTGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWLPSLR*HQWQRP
Trigger: CGGCCTCTGCCACTGGTGTCAGCGCAAACTGGGCAA...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCGGTCGCTGGTGCCGCTaGAGTCCTTGGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSASPPLARSSRTGRSCGRWCR*SPWPAA
Trigger: AGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACC...GCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCGAAACGGGGCCCAGTTaGGTCCTGGGACCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGETGPS*VLGPLP
Trigger: AGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTC...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGGACCCCCAGGTCAGGTaGTGGTGGCCTCACAACCTC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWDPQVR*WWPHNL
Trigger: GAGGTTGTGAGGCCACCATCACCTGACCTGGGGGTC...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGCACGCGAAATTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERGSVRRSDSSWGVWPGTRNWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCG...CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR GCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGALSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGC...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp AGGTCTGAGACGGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RSETEERGSVRRSDSSWGALSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGC...ACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCCGTCTCAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCACCGCCTTCCCTCCTaGAGGCAACTTGATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLHRLPS*RQLDSL
Trigger: AAGGCTATCAAGTTGCCTGCAGGAGGGAAGGCGGTG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCACTGGGCCACGGGCTaGCGGGGACGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLHWATG*RGRAIM
Trigger: CATGATTGCCCGTCCCCGGCAGCCCGTGGCCCAGTG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGCCCGGCCTCCAACCCTaGCTGGCCTTCACAAAACCT +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKPGLQP*LAFTKP
Trigger: AGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGCCGGG...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTTCTGTTTCTGACCTCTaGCTCACCCGACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRASVSDL*LTRPHS
Trigger: TGAGTGGGGTCGGGTGAGGCAGAGGTCAGAAACAGA...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGCCTGCCTCCTTTCCCTaGACTGTGAGTGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKPASFP*TVSESG
Trigger: GCCCGACTCACTCACAGTGCAGGGAAAGGAGGCAGG...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTAGGCGACCCGTCTACTaGAGCAAGCAGAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRARRPVY*SKQNAQ
Trigger: CTGAGCATTCTGCTTGCTGCAGTAGACGGGTCGCCT...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCACCCCTGCCAGGAGATaGTCTCTGCATAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLTPARR*SLHRIG
Trigger: GCCAATCCTATGCAGAGAGCATCTCCTGGCAGGGGT...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCCCTCGGCCCACCGCTTaGCGCCCCAACATAGCATCC +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGPRPTA*RPNIAS
Trigger: GGATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGG...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETAARWL*TVRQRP
Trigger: AGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp TTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGGCCGTGGACAGGGCTGCCGCATCAGGGTaGGGGGTCGCTGGCATTTCG +
Preference number: 4 (lower is better)
Translates to: FGSPVELGIDSRVVAVDRAAASG*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGC...CCTGTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLPRGPS*LGWSGC
Trigger: GCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCAGGGCCACAGAGGCTaGAGAAGGGATTACAACCCA +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLQGHRG*RRDYNP
Trigger: TGGGTTGTAATCCCTTCTGCAGCCTCTGTGGCCCTG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCTCAGTTTTCCAGGGCTaGTTTCATGGAGAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRSVFQG*FHGERL
Trigger: CAGGCGCTCTCCATGAAAGCAGCCCTGGAAAACTGA...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACTTCAGCTGGTGCCACTaGGCCACGGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCCGTGGCCCAGTGGCACCAGCTGAA...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGAGGGGTCTGCCTGTCTaGCCGTCTGGCTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWRGLPV*PSGSRA
Trigger: AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCT...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGGGATGGGCCTCTCCTaGCCAGGCCGGGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAGMGLS*PGRGQT
Trigger: CGTTTGGCCCCGGCCTGGCCAGGAGAGGCCCATCCC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCGGTCTCCCCACGCCCTaGATGTGGGGACCCTATCCA +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGGLPTP*MWGPYP
Trigger: TGGATAGGGTCCCCACATCCAGGGCGTGGGGAGACC...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCTGGGGGCTGGCTCACTaGGCGGTCTTCCGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAWGLAH*AVFRGA
Trigger: TGCCCCGCGGAAGACCGCCCAGTGAGCCAGCCCCCA...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLFPAAR*LCTVRQ
Trigger: CTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAA...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGRVRGR*HFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCT...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGAGGGGACGTCAGGCTaGGTGACCCTGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWEGTSG*VTLEGT
Trigger: GGTGCCCTCCAGGGTCACCCAGCCTGACGTCCCCTC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTTGGCCCCATGGATGGTaGTGGGAAAGCTGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGWPHGW*WESWSV
Trigger: GACGCTCCAGCTTTCCCACCACCATCCATGGGGCCA...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCAGTGGCCCCATGGATaGTGGTGGGAAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGQWPHG*WWESWS
Trigger: GCTCCAGCTTTCCCACCACCATCCATGGGGCCACTG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp GGGAGCCACGAGCTGGGGCATCGGCGTGCTCAAGGCTaGTCCTTCTGGTTGTCTTTGCGTGGGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GSHELGHRRAQG*SFWLSLRGRER
Trigger: CCTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGCACGAGGCGAAGGACTCATTaGAGATGGGGTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ERGSVRRSDSSWGVWPGTRRRTH*RWGSGS
Trigger: GGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCT...CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCCAGGGAGTGCGGGTaGCTTGCCCAAAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPRECG*LAQSPG
Trigger: CCCAGGACTTTGGGCAAGTCACCCGCACTCCCTGGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGGGCCTGCGACAGAGTaGAGAGACGGATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHGPATE*RDGWAC
Trigger: GCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGCCTTGTGTCAGGCCTaGTCTGGGAGATGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGALCQA*SGRCSC
Trigger: GCAGCTACATCTCCCAGATCAGGCCTGACACAAGGC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCCCCTTTGGTTTGTCTaGGCTGCCTTGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWPLWFV*AALEGG
Trigger: GCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCCTTCTGAAGTACCCTaGGAGCTGCGGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWPSEVP*ELRGLS
Trigger: GCTGAGCCCCCGCAGCTCTCAGGGTACTTCAGAAGG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GCCRLCCRIRVRGRWHFGSVCPV*ADTSGR
Trigger: TCTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...GCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCACTGGGCCACGGGCTaGCGGGGACGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAHWATG*RGRAIM
Trigger: CATGATTGCCCGTCCCCGGCAGCCCGTGGCCCAGTG...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGCCTCTGGAGGGGTCTaGCTGTCTGGCCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHASGGV*LSGRLA
Trigger: AGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGCCTCTGGAGGGGTCTaGCTGTCTGGCCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLASGGV*LSGRLA
Trigger: AGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCTTGGTTTGTCTGAGCTaGCTTGGAGGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLLVCLS*LGGWQV
Trigger: CACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAA...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCGCAGACAGGGATCCCTaGCCAGGGGGCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGADRDP*PGGSQS
Trigger: AGATTGTGAGCCCCCTGGGCAGGGATCCCTGTCTGC...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGTCGCTGGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: GRWHFGSPVELGIDSRVVRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...CACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTTGGCCGGCAGCTCCTaGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGLAGSS*AFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: TTLTSRASLPGPRPTACRQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGTCCTCCCCTCCCTATaGCAGGGGGCTCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETVLPSL*QGAQAG
Trigger: CCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGAC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACGTCCTCCCCTCCCTATaGCAGGGGGCTCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYVLPSL*QGAQAG
Trigger: CCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGAC...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGCCTGTCTGGCCGTCTaGCTCTCGAGCTCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHACLAV*LSSSPN
Trigger: GTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGGGACCATGCCCACCTaGCGGGCCTCTGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETGTMPT*RASGGV
Trigger: GACCCCTCCAGAGGCCCGCCAGGTGGGCATGGTCCC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGCCTCCAACCCTGCCTaGCCTTCACAAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGASNPA*PSQNLP
Trigger: AGGCAGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTGGGGGCTGGCTCACTaGGCGGTCTTCCGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYWGLAH*AVFRGA
Trigger: TGCCCCGCGGAAGACCGCCCAGTGAGCCAGCCCCCA...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCCACTCGATACAAGTTaGTTGGATCCCCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLPLDTS*LDPQGE
Trigger: TTCGCCCTGGGGATCCAACCAACTTGTATCGAGTGG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGTGGGTGGGGTCTGGTTaGGAAGAGACCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWWVGSG*EETPAR
Trigger: CCTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCA...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATCCGCGGCGGCCACTTTaGCGCCCGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHPRRPL*RPTGGC
Trigger: GCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGG...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTGGTGGTGGGCTGGCTaGGCTGCCGGCCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIWWWAG*AAGPAG
Trigger: ACCAGCGGGGCCGGCAGCCCAGCCAGCCCACCACCA...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCACCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSPSCLG*SGCGPL
Trigger: CAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IAAWLQILPEGLHLGQVHPSCLG*SGCGPL
Trigger: CAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...GTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGGCCCGCTTCACTCCTaGTGGGGGCAGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSGPLHS*WGQGPA
Trigger: TGCTGGCCCCTGCCCCCACCAGGAGTGAAGCGGGCC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTTGCCCAGTTTGCGCTaGCACCAGTGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRLPSLR*HQWQRP
Trigger: CGGCCTCTGCCACTGGTGTCAGCGCAAACTGGGCAA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGT +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLTAPTP*VWRAHR
Trigger: ACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGT...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLGVDEV*DGGTWL
Trigger: GAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCC...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACGGTCGCTGGTGCCGCTaGAGTCCTTGGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYGRWCR*SPWPAA
Trigger: AGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACC...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGAAACGGGGCCCAGTTaGGTCCTGGGACCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAETGPS*VLGPLP
Trigger: AGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGGGCTCGGGACCCCCTaGGAAGGAAGGGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAGLGTP*EGREMS
Trigger: ACTCATCTCCCTTCCTTCTCAGGGGGTCCCGAGCCC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGAGATGTGGCTGCGTATaGGGTGTGGGAAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLRCGCV*GVGSWR
Trigger: CCGCCAGCTTCCCACACCTCATACGCAGCCACATCT...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGAAGCAGGGATCAGCCTaGAATCTGCCGTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKKQGSA*NLPSPR
Trigger: CCTTGGAGACGGCAGATTTCAGGCTGATCCCTGCTT...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGGGACGTCAGGCTGGGTaGCCCTGGAGGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVGRQAG*PWRAPL
Trigger: CAGGGGTGCCCTCCAGGGTCACCCAGCCTGACGTCC...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGTTGGTCTCCAGCTTGTaGTTCTTGTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKLVSSL*FLSGSR
Trigger: CCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAA...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCCGTAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGRRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTACG...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCTCGGGCAGAAGGAGCTaGTCCCGGGGACCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRASGRRS*SRGPGS
Trigger: ACTCCCTGGTCCCCGGGAGCAGCTCCTTCTGCCCGA...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTCTGCAGCAAGCAGAATaGTCAGCTCAAGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGLQQAE*SAQGEA
Trigger: GGCTTCCCCTTGAGCTGAGCATTCTGCTTGCTGCAG...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTTCGGAGTCCTCCTaGCTTGACCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAPSESS*LDPQVR
Trigger: CCTGACCTGGGGGTCAAGGCAGGAGGACTCCGAAGG...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCCTTCGGAGTCCTCCTaGCTTGACCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHPSESS*LDPQVR
Trigger: CCTGACCTGGGGGTCAAGGCAGGAGGACTCCGAAGG...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCGCTGGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGTGTTGCAGGCTCTGCTaGCGCATCAGGGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRWHFGSPVELGIDSRVVCCRLC*RIRVRG
Trigger: ACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACA...CACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACCGGGTCCCGGTACATaGTCCCCTCGTCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSPGPGT*SPRRRF
Trigger: GAACCGGCGACGAGGGGACCATGTACCGGGACCCGG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GGTWLGPAVGLIVGCLAWTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...CCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCCCTCAGCTTCTCCGTaGGGATATCGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWPSASP*GYRRRR
Trigger: CCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLVLHLP*PALPGQ
Trigger: CTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCAC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHVLHLP*PALPGQ
Trigger: CTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCAC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGGGACCATGCCCACCTaGCGGGCCTCTGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLGTMPT*RASGGV
Trigger: GACCCCTCCAGAGGCCCGCCAGGTGGGCATGGTCCC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGTCCACATCGGGGGCTaGAGAGGGAGTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSVHIGG*RGSGLS
Trigger: AGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGAC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGTCCACATCGGGGGCTaGAGAGGGAGTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAVHIGG*RGSGLS
Trigger: AGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGAC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACACCTGAAACTGCCCTaGGGATGGGCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLHLKLP*GWASPG
Trigger: GCCAGGAGAGGCCCATCCCCAGGGCAGTTTCAGGTG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCGAACTCACAGAATCCTaGTCTTTTCCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPELTES*SFPCLL
Trigger: AAGGAGGCAGGGAAAAGACCAGGATTCTGTGAGTTC...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGGCTTTGTCACCAGCTaGGTCTTGTATCAATACCAG +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRGFVTS*VLYQYQ
Trigger: CTGGTATTGATACAAGACCCAGCTGGTGACAAAGCC...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCCACGCCCTGGATGTaGGGACCCTATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPTPWM*GPYPES
Trigger: GGACTCTGGATAGGGTCCCCACATCCAGGGCGTGGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGGGGCAGGCGGGTGGTaGGGGGACAGGAAACCGAGG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHGAGGW*GDRKPR
Trigger: CCTCGGTTTCCTGTCCCCCCACCACCCGCCTGCCCC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACAGGGCGAAGGCGCCTaGAAGGTGGGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSQGEGA*KVGAGS
Trigger: TGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACTCGATACAAGTTGGTTaGATCCCCAGGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHSIQVG*IPRAKA
Trigger: CGCCTTCGCCCTGGGGATCCAACCAACTTGTATCGA...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGTGGCTAAGAGCTCTGTaGGCGGGGCTCGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKWLRAL*AGLGKN
Trigger: ATTTTTCCCGAGCCCCGCCCACAGAGCTCTTAGCCA...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGGGGAAGCCCAAGCCTaGTCGCTAATGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWGEAQA*SLMCLG
Trigger: ACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCC...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACAGGTGCGGGGGTCCTaGGGCGGGTGGAATTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLQVRGS*GGWNLY
Trigger: GTACAAATTCCACCCGCCCCAGGACCCCCGCACCTG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCTCTGTCCCTTCCCTaGCATCTGGTGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPLSLP*HLVPEG
Trigger: GCCCTCTGGCACCAGATGCCAGGGAAGGGACAGAGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCGGCGTCCTCTCCGGGTaGCGGCACCGGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGGVLSG*RHRCRL
Trigger: AAGCCGGCACCGGTGCCGCCACCCGGAGAGGACGCC...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCATTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSFPAAR*LCTVRQ
Trigger: CTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAA...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTTGGCCGTGGACAGGGTaGAGTCCTCGAAATTGGACA +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGWPWTG*SPRNWT
Trigger: TGTCCAATTTCGAGGACTCCACCCTGTCCACGGCCA...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGGGCTCTGGCTGGTGGTaGGCTGGCTGGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISGSGWW*AGWAAG
Trigger: GCCGGCAGCCCAGCCAGCCCACCACCAGCCAGAGCC...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp ATCGCTGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACGGCCCAGGCTCTGGCTaGTGGTGGGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IAAWLQILPEGLHLGQVHGPGSG*WWAGWA
Trigger: AGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCC...GTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCAGCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGGTGCCGAGGCCATGTaGGCCTGCAGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHGAEAM*ACSWPR
Trigger: CCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGAAGGCGGGTGCCGAGGCCATGTaGGCCTGCAGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVMMMVVSLSFSVGISKAGAEAM*ACSWPR
Trigger: CCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACC...CGCCTTCGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
3UTR CAA 72 bp CCTGGGGAGAGCATGAGCATCTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAGGAACGTGGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PGESMSISLVRE*TRSETEERGSV
Trigger: GACCGAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGAGATGCTCATGCTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLGVDEV*DGGTWL
Trigger: GAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCC...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGGAGTTGACGAGGTCTaGGACGGAGGAACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAGVDEV*DGGTWL
Trigger: GAGCCACGTTCCTCCGTCTCAGACCTCGTCAACTCC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGGGTCGCTGGTGCCGCTaGAGTCCTTGGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVGRWCR*SPWPAA
Trigger: AGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACC...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGTGGGGTCGTTGCGGCTaGAGCGGTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLWGRCG*SGHSPG
Trigger: TCCTGGACTATGACCGCTTCAGCCGCAACGACCCCA...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GGTCGCTGGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGTGGGGTCGTTGCGGCTaGAGCGGTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRWHFGSPVELGIDSRVVWGRCG*SGHSPG
Trigger: TCCTGGACTATGACCGCTTCAGCCGCAACGACCCCA...CACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGGCCGTGGACTGGGGTCGTTGCGGCTaGAGCGGTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HFGSPVELGIDSRVVAVDWGRCG*SGHSPG
Trigger: TCCTGGACTATGACCGCTTCAGCCGCAACGACCCCA...GTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCATGGGGTCGTTGCGGCTaGAGCGGTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAWGRCG*SGHSPG
Trigger: TCCTGGACTATGACCGCTTCAGCCGCAACGACCCCA...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTAGGCGAAGGACTCATTaGAGATGGGGTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGRRRTH*RWGSGS
Trigger: GGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCT...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTAGATGTGGCTGCGTATaGGGTGTGGGAAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRRCGCV*GVGSWR
Trigger: CCGCCAGCTTCCCACACCTCATACGCAGCCACATCT...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTCCCTGCACTGTGAGTaGGTCGGGCAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRSLHCE*VGQKEL
Trigger: CAGCTCCTTCTGCCCGACTCACTCACAGTGCAGGGA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGGACCAGCGTGGGGATaGGAGGGCTTAAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHGPAWG*EGLSRD
Trigger: ATCCCTGCTTAAGCCCTCTCATCCCCACGCTGGTCC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGGACCAGCGTGGGGATaGGAGGGCTTAAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWGPAWG*EGLSRD
Trigger: ATCCCTGCTTAAGCCCTCTCATCCCCACGCTGGTCC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATTCACCTACTATGTATaGTGTTCCTCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRFTYYV*CSSRSQ
Trigger: CTGGGATCTGGAGGAACATCATACATAGTAGGTGAA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGGCAGACGAAGCCCATaGAAGGGCCTGCGACAGAGT +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLGRRSP*KGLRQS
Trigger: ACTCTGTCGCAGGCCCTTTCATGGGCTTCGTCTGCC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWALSLA*PPSPRN
Trigger: ATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCCAGGTTCTCTCGGCTaGAACCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLPGSLG*NPRGPH
Trigger: ATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGTCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCTCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: GDGQSCPSSASPPLARSSSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCCGGCCTCCAACCCTaGCTGGCCTTCACAAAACCT +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPGLQP*LAFTKP
Trigger: AGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGCCGGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTCCTGGTCTTTTCCCTaGCTCCTTTCCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGSWSFP*LLSLHC
Trigger: ACAGTGCAGGGAAAGGAGGCAGGGAAAAGACCAGGA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCGCCAAAGAGGAGGATaGAGTTGGGGCCGACCCCAT +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLRQRGG*SWGRPH
Trigger: ATGGGGTCGGCCCCAACTGCATCCTCCTCTTTGGCG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGCCTGGTCGCTAATGTaGCTGGGTGGGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHAWSLM*LGGVWL
Trigger: CAACCAGACCCCACCCAGGCACATTAGCGACCAGGC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGAARWL*TVRQRP
Trigger: AGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSGCCRL*CRIRVR
Trigger: CCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCTGGAAGGAAAGAGCTTaGCCAGGGCCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGWKERA*PGPQRL
Trigger: CAGCCTCTGTGGCCCTGGGCAAGCTCTTTCCTTCCA...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGCACCTGGCGGGCCTCTaGAGGGGTCTGCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVHLAGL*RGLPVW
Trigger: CCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACACGCACACACACAATaGACACAACACGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRHAHTQ*TQHEYK
Trigger: TTTGTACTCGTGTTGTGTCCATTGTGTGTGTGCGTG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTGGAGATGAGTCCTGGTaGAATGCTATGCACACAGTA +
Preference number: 4 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAGDESW*NAMHTV
Trigger: TACTGTGTGCATAGCATTCCACCAGGACTCATCTCC...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCGAAGGGCAGGCAAGCTaGAAAGCATGGAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGEGQAS*KAWRIG
Trigger: CCCTATTCTCCATGCTTTCCAGCTTGCCTGCCCTTC...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACCGTTCGAAGGAAAATaGTTCCCAAATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRPFEGK*FPNANG
Trigger: ACCATTGGCATTTGGGAACCATTTTCCTTCGAACGG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCGGGTCCTGGGGCGGGTaGAATTTGTACAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGGSWGG*NLYSTF
Trigger: GAAAGTGCTGTACAAATTCCACCCGCCCCAGGACCC...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGCCAGGCTCTGGCTGGTaGTGGGCTGGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISPGSGW*WAGWAA
Trigger: GGCAGCCCAGCCAGCCCACCACCAGCCAGAGCCTGG...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCGGCCCAGGCTCTGGCTaGTGGTGGGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGGPGSG*WWAGWA
Trigger: AGCCCAGCCAGCCCACCACCAGCCAGAGCCTGGGCC...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGGGTGCCGAGGCCATGTaGGCCTGCAGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISGAEAM*ACSWPR
Trigger: CCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACC...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAAGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTTGTCTGAGCTGCCTTaGAGGGTGGCAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGLSELP*RVASVL
Trigger: GAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAA...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGGGCCTGAAACTACAGTaGCCCCATGGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLGLKLQ*PHGWWW
Trigger: CCACCACCATCCATGGGGCCACTGTAGTTTCAGGCC...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCATCTCAGAGCAGGCATaGACGAAGACAGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGISEQA*TKTDPE
Trigger: CTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGAT...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCATGGGGAGCCACGAGCTaGGGCATCGGCGTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSWGATS*GIGVLK
Trigger: CTTGAGCACGCCGATGCCCCAGCTCGTGGCTCCCCA...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGGGAAACAGATGGTCTaGGGAGCCACGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAGKQMV*GATSWG
Trigger: GCCCCAGCTCGTGGCTCCCCAGACCATCTGTTTCCC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp CAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTaGGGAAGAGACCCCTGCCAGGAGATGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QAWSLMCLGGVW*GRDPCQEMLSA
Trigger: TGCAGAGAGCATCTCCTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp ATCTTGACGAAGGGGTCGCTGGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: ILTKGSLVPLKS*AGSSWAFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCACCAGCGACCCCTTCGTCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGT +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGTAPTP*VWRAHR
Trigger: ACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGT...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp AAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCAACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGT +
Preference number: 4 (lower is better)
Translates to: KALRPRIAPPSGLPGRISTAPTP*VWRAHR
Trigger: ACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGT...TGAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGTTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAACCTCTTGTCCCCCTaGGCGTTCTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHNLLSP*AFWFCW
Trigger: CCAGCAGAACCAGAACGCTCAGGGGGACAAGAGGTT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTCCTGGAGGGCACCCCTaGGGCCTAGAGAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETPGGHP*GLERTL
Trigger: TAGAGTCCTCTCTAGGCCTCAGGGGTGCCCTCCAGG...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCCAGCAGGTGGACACATaGCAATGGGGATGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGQQVDT*QWGCAR
Trigger: ACGAGCACATCCCCATTGTCATGTGTCCACCTGCTG...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCCAGGTTGTGGGAAATaGGGGACAGACAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWPGCGK*GTDSFG
Trigger: TCCAAAGCTGTCTGTCCCTCATTTCCCACAACCTGG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCCCCGGGGCTTCCTCTaGTCTCTGGAACAGAGATCA +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLPRGFL*SLEQRS
Trigger: TGATCTCTGTTCCAGAGATCAGAGGAAGCCCCGGGG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGGCCAAGGGAGCCCCTaGGGCTACTTACCTGACCCC +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPGQGSP*GYLPDP
Trigger: GGGGTCAGGTAAGTAGCCTCAGGGGCTCCCTTGGCC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLSVCPV*ADTSGR
Trigger: TCTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCCGTAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSRRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTACG...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGGCCGTGGACCGTAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: HFGSPVELGIDSRVVAVDRRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTACG...GTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCGTAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLRRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTACG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAATCATGTCCTTCCAGTaGTTCACCTCCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLIMSFQ*FTSPGP
Trigger: CGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGAT...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCACTGGGCCACGGGCTaGCGGGGACGGGCAATCATG +
Preference number: 4 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGHWATG*RGRAIM
Trigger: CATGATTGCCCGTCCCCGGCAGCCCGTGGCCCAGTG...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTCCCAGAGCTCCACCTaGACGTGGTGGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDISQSST*TWWWWG
Trigger: GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGA...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTACCTCGGCCCACCGCTTaGCGCCCCAACATAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLPRPTA*RPNIAS
Trigger: GGATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGG...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACAGTTCCCCCATTCTCTaGTCTCCTATTGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHSSPIL*SPIALD
Trigger: GTCTAGGGCAATAGGAGAGCAGAGAATGGGGGAACT...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGGCCCATGAAAGGGCCTaGGACAGAGTGAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWAHERA*DRVKRR
Trigger: CCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGC...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTCCCTGGCATCTGGTaGCAGAGGGCAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHFPGIW*QRAGAG
Trigger: CCCCGCACCTGCCCTCTGGCACCAGATGCCAGGGAA...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTATTCCCTGGCATCTGGTaGCAGAGGGCAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLFPGIW*QRAGAG
Trigger: CCCCGCACCTGCCCTCTGGCACCAGATGCCAGGGAA...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGCTGCCGCATCAGGGTaGGGGGTCGCTGGCATTTCG +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIAAASG*GVAGIS
Trigger: CGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTGTTGCAGGCTCTGCTaGCGCATCAGGGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYCCRLC*RIRVRG
Trigger: ACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACA...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCTGGGTTCCTGGGTTTTaGAGGTCAGGGATATTGGCA +
Preference number: 4 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGWVPGF*RSGILA
Trigger: TGCCAATATCCCTGACCTGCAAAACCCAGGAACCCA...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPVGCLA*HGGCVH
Trigger: GTGAACACAGCCCCCGTGCCAGGCCAGACACCCCAC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDISSWGV*PGTGAV
Trigger: CACAGCCCCCGTGCCAGGCCAGACACCCCACGATGA...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGTCGCTGGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GRWHFGSPVELGIDSRVVILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...CACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACTTGGCCGGCAGCTCCTaGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHLAGSS*AFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAA...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAACCTGGGACCCCTCCCTaGCTGAGCCCTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEPGTPP*LSPQGP
Trigger: AGGACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGG...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGGCCCAGTTGAGTCCTaGGACCCCTCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPGPVES*DPSLAE
Trigger: CTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCATGTGGGGGATGGGGCTaGTACTTCCTAGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPACGGWG*YFLETG
Trigger: CCCCGTTTCTAGGAAGTACCAGCCCCATCCCCCACA...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGGGATGGGCCTCTCCTaGCCAGGCCGGGGCCAAACG +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGGMGLS*PGRGQT
Trigger: CGTTTGGCCCCGGCCTGGCCAGGAGAGGCCCATCCC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTTCAGGCCCAGGCTCGTaGACCCCCAGGATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPSGPGS*TPRIGG
Trigger: GCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGA...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCATCAGGCCCAGGCTCGTaGACCCCCAGGATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSSGPGS*TPRIGG
Trigger: GCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGA...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCATCCAGAGTGGAACTaGGGGCTAAGACCACGGCCA +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLHPEWN*GLRPRP
Trigger: TGGCCGTGGTCTTAGCCCCCAGTTCCACTCTGGATG...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCTGGAAGGTGGGGGCTaGCTCACTGGGCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDILEGGG*LTGRSS
Trigger: GGAAGACCGCCCAGTGAGCCAGCCCCCACCTTCCAG...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACCTCTGTCCCTTCCCTaGCATCTGGTGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSPLSLP*HLVPEG
Trigger: GCCCTCTGGCACCAGATGCCAGGGAAGGGACAGAGG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCCCCCTGGCTTGTTTGTaGCTGTTTTCCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGPLACL*LFSSVP
Trigger: AGGGACAGAGGAAAACAGCCACAAACAAGCCAGGGG...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCGCGGCGGCCACTTTaGCGCCCGACAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VPGFCRSGILAKSSCSESPRRPL*RPTGGC
Trigger: GCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGG...GCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAGATCTGAGGATGGCTaGACACTCGGGAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHRSEDG*TLGKGL
Trigger: CAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAGCTGCCTTGGAGGGTaGCAAGTGTCCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHSCLGG*QVSSGN
Trigger: GTTCCCAGAGGACACTTGCCACCCTCCAAGGCAGCT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp CAGGCCCAGGCTCGTGGACCCCCAGGATTGGAGGCTTaGTCACCAGCTGGGTCTTGTATCAATACCAGGACC +
Preference number: 4 (lower is better)
Translates to: QAQARGPPGLEA*SPAGSCINTRT
Trigger: GGTCCTGGTATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp CCATGGATGGTGGTGGGAAAGCTGGAGCGTCCCCCTTaGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PWMVVGKLERPP*VCLSCLGGWQV
Trigger: CACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCATCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp CATCGGCGTGCTCAAGGCTTGTCCTTCTGGTTGTCTTaGCGTGGGAGGGAGAGGAGCGCAGGACGTAACCCA +
Preference number: 4 (lower is better)
Translates to: HRRAQGLSFWLS*RGRERSAGRNP
Trigger: TGGGTTACGTCCTGCGCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp TGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGTTGCCCAGTTTGCGCTaGCACCAGTGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CSESPKTKDSTTIRPSRKLPSLR*HQWQRP
Trigger: CGGCCTCTGCCACTGGTGTCAGCGCAAACTGGGCAA...CTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGACCCCCAGGTCAGGTaGTGGTGGCCTCACAACCTC +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSDPQVR*WWPHNL
Trigger: GAGGTTGTGAGGCCACCATCACCTGACCTGGGGGTC...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGGAGTCCTCCTGCCTTaGCCCCCAGGTCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHGVLLP*PPGQVM
Trigger: CATCACCTGACCTGGGGGTCAAGGCAGGAGGACTCC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCGAAATTGGACAAGTTaGGCTTCCCTGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRRNWTS*ASLRPG
Trigger: ACCTGGCCGCAGGGAAGCTCAACTTGTCCAATTTCG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGGGCCTGGTCACCAGTaGAGTCAAATCCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSGPGHQ*SQIPKV
Trigger: CACCTTTGGGATTTGACTTCACTGGTGACCAGGCCC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCGCTGGCATTTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGTCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GRWHFGSPVELGIDSRVVSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...CACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAAATGCCAGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACTCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp TGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTCGTAGGGGTCTGATGTaGCCCCGATGTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: CPSSASPPLARSSRTGRSRRGLM*PRCPWL
Trigger: AAGCCATGGACATCGGGGGCACATCAGACCCCTACG...AGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATCATGTCCTTCCAGTaGTTCACCTCCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYIMSFQ*FTSPGP
Trigger: CGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGAT...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGAAAATGGGGGACCATaGCCACCTGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIENGGP*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATGGTCCCCCATTTTC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTCCACTCCAGGTGCTaGCTTAAAGAAAATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWLHSRC*LKENGG
Trigger: TCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACCCTGCCTCCTTTCCCTaGACTGTGAGTGAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYPASFP*TVSESG
Trigger: GCCCGACTCACTCACAGTGCAGGGAAAGGAGGCAGG...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTCGCCAAAGAGGAGGATaGAGTTGGGGCCGACCCCAT +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETRQRGG*SWGRPH
Trigger: ATGGGGTCGGCCCCAACTGCATCCTCCTCTTTGGCG...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGAAAATGGGGAGCCGTTaGCCCGCCCACTCGATACAA +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWKMGSR*PAHSIQ
Trigger: TTGTATCGAGTGGGCGGGGCAACGGCTCCCCATTTT...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGTTGGGAAGAGACCCCTaGCAGGAGATGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLLGRDP*QEMLSA
Trigger: TGCAGAGAGCATCTCCTGGCAGGGGTCTCTTCCCAA...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGGGCTGTTGCAGGCTCTaGTGCCGCATCAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISGCCRL*CRIRVR
Trigger: CCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCC...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp TCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATTGCCGGCCCCGCTGGTaGTGGCTCAGCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SGSAGFLGFAGQGYWQSHCRPRW*WLSGCC
Trigger: GCAACAGCCGCTGAGCCAGCACCAGCGGGGCCGGCA...ATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CTTCATGATCTTCACGGTGAGCGTGGACTCCTGGAAGTTGTAGCCGACACTGAAGAGGCCATGTGGGCCTaGAGCTGGCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHDLHGERGLLEVVADTEEAMWA*SWPRLW
Trigger: CCAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTC...TTCAGTGTCGGCTACAACTTCCAGGAGTCCACGCTCACCGTGAAGATCATGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp AAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCACCACGTGGTCCCAGCTaGCTGGGTTGGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KALRPRIAPPSGLPGRISPRGPS*LGWSGC
Trigger: GCAGCCGCTCCAACCCAGGCAGCTGGGACCACGTGG...TGAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: CPSSASPPLARSSRTGRSILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...AGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GTTCACGATGATGGAGTTGGCAGAGGGGTTGTAGCAGAGAGACAAGAGCAGCTCCGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: VHDDGVGRGVVAERQEQLRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...GAGCTGCTCTTGTCTCTCTGCTACAACCCCTCTGCCAACTCCATCATCGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTTGGCCGGCAGCTCCTaGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: CPSSASPPLARSSRTGRSLAGSS*AFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAA...AGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCTTGGCCGGCAGCTCCTaGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRALAGSS*AFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAA...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGTCTTCCGCTTCACCTTaGTCTCCAGCTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWSSASP*SPACAS
Trigger: AGAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGA...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGGTGCTTCACCTCCCCTaGCCCGCTCTTCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVVLHLP*PALPGQ
Trigger: CTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCAC...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTTCAGCTGGTGCCACTaGGCCACGGGCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQFSWCH*ATGCRG
Trigger: TCCCCGGCAGCCCGTGGCCCAGTGGCACCAGCTGAA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATTGTGGGGGATGGGGCTaGTACTTCCTAGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYCGGWG*YFLETG
Trigger: CCCCGTTTCTAGGAAGTACCAGCCCCATCCCCCACA...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHGLERE*PLSTPG
Trigger: ACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCACCCCACTCAGCCCTATaGGCCTCTCCTCTCACACCC +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSPHSAL*ASPLTP
Trigger: GGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGG...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCCCCACTCAGCCCTATaGGCCTCTCCTCTCACACCC +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIPHSAL*ASPLTP
Trigger: GGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGG...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGAAGGGAGATGAGTCCTaGTGGAATGCTATGCACACA +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKKGDES*WNAMHT
Trigger: TGTGTGCATAGCATTCCACCAGGACTCATCTCCCTT...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGAGAATAGGGCAGATGTaGCTGCGTATGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLRIGQM*LRMRCG
Trigger: CCCACACCTCATACGCAGCCACATCTGCCCTATTCT...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGAGAGGAGGATGCAGTTaGGGCCGACCCCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLRGGCS*GRPHFK
Trigger: CTTAAAATGGGGTCGGCCCCAACTGCATCCTCCTCT...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTCGATACAAGTTGGTTaGATCCCCAGGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRSIQVG*IPRAKA
Trigger: CGCCTTCGCCCTGGGGATCCAACCAACTTGTATCGA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTGGCTAAGAGCTCTGTaGGCGGGGCTCGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRWLRAL*AGLGKN
Trigger: ATTTTTCCCGAGCCCCGCCCACAGAGCTCTTAGCCA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGGGTGGGGTCTGGTTaGGAAGAGACCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHWVGSG*EETPAR
Trigger: CCTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCA...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGTGGTGGTGGGGCGCTaGGGAAGCCCAAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGVVVGR*GSPSLV
Trigger: GACCAGGCTTGGGCTTCCCCAGCGCCCCACCACCAC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACTCAAGGGTAGTGGCCGTGGACAGGGTGGAGTCCTCGAAACACGACAACGGAGTTGAGGGACAGTCGTaGGTCGCCATAAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: DSRVVAVDRVESSKHDNGVEGQS*VAIRGV
Trigger: TACGCCCCTTATGGCGACCCACGACTGTCCCTCAAC...TCCGTTGTCGTGTTTCGAGGACTCCACCCTGTCCACGGCCACTACCCTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539246.5
CDS-3UTR CCA 90 bp GAAGGACTCATTGAAGATGGGGTTCAGGTTCCTCTTCATCGTCACCGTCTTCTTCCCAGCTGCCTGGGTTaGAGCGGCTGCGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGLIEDGVQVPLHRHRLLPSCLG*SGCGPL
Trigger: CAGGGGGCCGCAGCCGCTCCAACCCAGGCAGCTGGG...AAGAAGACGGTGACGATGAAGAGGAACCTGAACCCCATCTTCAATGAGTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCTAGTGGTCCCAGCTGCCTaGGTTGGAGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LGFAGQGYWQSHPVPKALVVPAA*VGAAAA
Trigger: GGCCGCAGCCGCTCCAACCCAGGCAGCTGGGACCAC...TAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCTCATCTGCCCCACCACGTaGTCCCAGCTGCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EAVIVQDLEVEDPLHHLLICPTT*SQLPGL
Trigger: CAACCCAGGCAGCTGGGACCACGTGGTGGGGCAGAT...GAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCGCAGGTCAGGGATATTaGCAAAGTCATCCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: GDGQSCPSSASPPLARSSAGQGY*QSHPVP
Trigger: CGGAACAGGATGACTTTGCCAATATCCCTGACCTGC...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACGTGGCAAGTGTCCTCTaGGAACTGAGGGAGGGGACG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYVASVL*ELREGT
Trigger: CGTCCCCTCCCTCAGTTCCCAGAGGACACTTGCCAC...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACCCAGGAAGGAGGCGCTaGCCTGAAACTACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYPGRRR*PETTVA
Trigger: GGCCACTGTAGTTTCAGGCCAGCGCCTCCTTCCTGG...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCAGCTTCCCCTGGGCTaGGTGGGGAAGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPQLPLG*VGKKGQ
Trigger: CTGCCCTTTCTTCCCCACCCAGCCCAGGGGAAGCTG...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGCTGGCCCCAAGTGCTaGGAGCAGAGGGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGAGPKC*EQRADG
Trigger: CCCATCCGCCCTCTGCTCCCAGCACTTGGGGCCAGC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACAGTTGTAGCCGACACTaGACTGGATCCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYSCSRH*TGSGPG
Trigger: ACCTGGGCCGGATCCAGTTCAGTGTCGGCTACAACT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAAGGCGAAGGACTCATTaGAGATGGGGTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLRRRTH*RWGSGS
Trigger: GGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCT...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATCTGGAGAAGGTCAGGTaGTGGACGATCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYLEKVR*WTIRDH
Trigger: GTGGTCTCTGATCGTCCATCACCTGACCTTCTCCAG...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGGGCCTGCGACAGAGTaGAGAGACGGATGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGGPATE*RDGWAC
Trigger: GCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGTCAAATCCCAAAGGTaGCACACTGAGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAVKSQR*HTEGRL
Trigger: GAGCCTCCCCTCAGTGTGTCACCTTTGGGATTTGAC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAAAGGAGGCGCTGGCCTaGAACTACAGTGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSKEALA*NYSGPM
Trigger: CATGGGGCCACTGTAGTTTCAGGCCAGCGCCTCCTT...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTACCAGGTTCTCTCGGCTaGAACCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLPGSLG*NPRGPH
Trigger: ATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGG...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GCTGAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCCAGGTTCTCTCGGCTaGAACCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AEAVIVQDLEVEDPLHHLPGSLG*NPRGPH
Trigger: ATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGG...AAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGGGCCTTCACAAAACCTaGCTTCTCTGTATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWGLHKT*LLCIVL
Trigger: GAGGACTATACAGAGAAGGCAGGTTTTGTGAAGGCC...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATCGGGCAGAAGGAGCTaGTCCCGGGGACCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGSGRRS*SRGPGS
Trigger: ACTCCCTGGTCCCCGGGAGCAGCTCCTTCTGCCCGA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCTTGGGAAGAGACCCCTaGCAGGAGATGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRALGRDP*QEMLSA
Trigger: TGCAGAGAGCATCTCCTGGCAGGGGTCTCTTCCCAA...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGGGGCAGGTGGGCCTTaGAGTCAGGATTCGGTAATT +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAGAGGP*SQDSVI
Trigger: AATTACCGAATCCTGACTGCAAGGCCCACCTGCCCC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp TGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTTGGCTCAGCGGCTGTTaGAGGCTCTGCTGCCGCATC +
Preference number: 4 (lower is better)
Translates to: CMASDPSRRSASGSGPPCWLSGC*RLCCRI
Trigger: GATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCA...ACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATCCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGCTGGGGCATCGGCGTaGTCAAGGCTTGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPAGASA*SRLVLL
Trigger: CAGAAGGACAAGCCTTGAGCACGCCGATGCCCCAGC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQVGCLA*HGGCVH
Trigger: GTGAACACAGCCCCCGTGCCAGGCCAGACACCCCAC...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTCATCGTGGGGTGTCTaGCCTGGCACGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQSSWGV*PGTGAV
Trigger: CACAGCCCCCGTGCCAGGCCAGACACCCCACGATGA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGACGGTCGGACTCATCGTaGGGTGTCTGGCCTGGCACG +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGRSDSS*GVWPGT
Trigger: CGTGCCAGGCCAGACACCCCACGATGAGTCCGACCG...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGATTTCACGGCTGCAACCCTCGTaGGCCTCATCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KALRPRIAPPSGLPGRISRLQPS*ASSSSE
Trigger: CTCCGAGGAGGATGAGGCCCACGAGGGTTGCAGCCG...TGAAATCCTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CCCGCTTGTCCTTGTACATCAGCCATACCTTCACGTAGGGGTCTGATGTGCCCCCCCTCAGCTTCTCCGTaGGGATATCGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PACPCTSAIPSRRGLMCPPSASP*GYRRRR
Trigger: CCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGG...GGGGCACATCAGACCCCTACGTGAAGGTATGGCTGATGTACAAGGACAAGCGGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACCCCTCAGCTTCTCCGTaGGGATATCGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYPSASP*GYRRRR
Trigger: CCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGG...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAAAACTGCCCTGGGGATaGGCCTCTCCTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGKLPWG*ASPGQA
Trigger: GGCCTGGCCAGGAGAGGCCCATCCCCAGGGCAGTTT...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAAGGTCTCCCCACGCCCTaGATGTGGGGACCCTATCCA +
Preference number: 4 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEGLPTP*MWGPYP
Trigger: TGGATAGGGTCCCCACATCCAGGGCGTGGGGAGACC...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGACTGGAAGGTGGGGGCTaGCTCACTGGGCGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGLEGGG*LTGRSS
Trigger: GGAAGACCGCCCAGTGAGCCAGCCCCCACCTTCCAG...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCCACTCGATACAAGTTaGTTGGATCCCCAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHPLDTS*LDPQGE
Trigger: TTCGCCCTGGGGATCCAACCAACTTGTATCGAGTGG...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGGAAGCCCAAGCCTaGTCGCTAATGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSGEAQA*SLMCLG
Trigger: ACCCAGGCACATTAGCGACCAGGCTTGGGCTTCCCC...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATCCACCTGCACGTGGTaGTGGTGGGGCGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGSTCTW*WWGAGE
Trigger: TTCCCCAGCGCCCCACCACCACCACGTGCAGGTGGA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGCACTCGGGAAGGGCCTaGTCACCAGTGAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: ASPFGLSELPWRVASVLWHSGRA*SPVKSN
Trigger: ATTTGACTTCACTGGTGACCAGGCCCTTCCCGAGTG...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTTGCCCAGTTTGCGCTaGCACCAGTGGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQLPSLR*HQWQRP
Trigger: CGGCCTCTGCCACTGGTGTCAGCGCAAACTGGGCAA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTAGTTGTAGCCGACACTaGACTGGATCCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDISCSRH*TGSGPG
Trigger: ACCTGGGCCGGATCCAGTTCAGTGTCGGCTACAACT...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGGGCTCGGGACCCCCTaGGAAGGAAGGGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQGLGTP*EGREMS
Trigger: ACTCATCTCCCTTCCTTCTCAGGGGGTCCCGAGCCC...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACAAGCAGGGATCAGCCTaGAATCTGCCGTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYKQGSA*NLPSPR
Trigger: CCTTGGAGACGGCAGATTTCAGGCTGATCCCTGCTT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAAAACTAGAAGAGGGCTaGGAGAAGCCGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSKLEEG*EKPQVQ
Trigger: CTGGACCTGCGGCTTCTCTCAGCCCTCTTCTAGTTT...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTAGCGTTTGCCCAGTTTaGGCTGACACCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETSVCPV*ADTSGR
Trigger: TCTGCCACTGGTGTCAGCGCAAACTGGGCAAACGCT...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGCAAAGCAGGAAAATaGCTCCCAGAGCCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSGKAGK*LPEPLP
Trigger: GGGAAGGGGCTCTGGGAGGCATTTTCCTGCTTTGCC...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAAAATGGGGGACCATaGCCACCTGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQENGGP*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATGGTCCCCCATTTTC...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGAAAATGGGGGACCATaGCCACCTGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGENGGP*PPGGPL
Trigger: CAGAGGCCCGCCAGGTGGGCATGGTCCCCCATTTTC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACTCCACTCCAGGTGCTaGCTTAAAGAAAATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLLHSRC*LKENGG
Trigger: TCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCTCTCTCCACTCCAGGTaGTGCCTTAAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGSLHSR*CLKENG
Trigger: CCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGA...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCGGCCTTCACAAAACCTaGCTTCTCTGTATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGGLHKT*LLCIVL
Trigger: GAGGACTATACAGAGAAGGCAGGTTTTGTGAAGGCC...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCATCTGTTTCTGACCTCTaGCTCACCCGACCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSSVSDL*LTRPHS
Trigger: TGAGTGGGGTCGGGTGAGGCAGAGGTCAGAAACAGA...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACACCCCTGCCAGGAGATaGTCTCTGCATAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYTPARR*SLHRIG
Trigger: GCCAATCCTATGCAGAGAGCATCTCCTGGCAGGGGT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGCCCATGAAAGGGCCTaGGACAGAGTGAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLAHERA*DRVKRR
Trigger: CCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGTGCTCGTTCCTTTTGTaGCTGTGTCTGAACCAGATG +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWCSFLL*LCLNQM
Trigger: CATCTGGTTCAGACACAGGCACAAAAGGAACGAGCA...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTATCCTCCTCGGAGCCTaGGGAGAGCATGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPILLGA*GEHEHL
Trigger: GAGATGCTCATGCTCTCCCCAGGCTCCGAGGAGGAT...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTCTTCCGCTTCACCTTaGTCTCCAGCTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRSSASP*SPACAS
Trigger: AGAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGGGCTGGAGAGGGAGTaGCCTCTCTCCACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGGLERE*PLSTPG
Trigger: ACCTGGAGTGGAGAGAGGCCACTCCCTCTCCAGCCC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGCACCTGAAACTGCCCTaGGGATGGGCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQHLKLP*GWASPG
Trigger: GCCAGGAGAGGCCCATCCCCAGGGCAGTTTCAGGTG...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGCCTCCAACCCTGCCTaGCCTTCACAAAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLASNPA*PSQNLP
Trigger: AGGCAGGTTTTGTGAAGGCCAGGCAGGGTTGGAGGC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTAAGGTCTACAAGCATTaGGGGATGGAGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETKVYKH*GMEGWR
Trigger: CCTCCACCCCTCCATCCCCCAATGCTTGTAGACCTT...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACAAGGTCTACAAGCATTaGGGGATGGAGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYKVYKH*GMEGWR
Trigger: CCTCCACCCCTCCATCCCCCAATGCTTGTAGACCTT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGATGAGACGGAATGAATaGAAGGTCTACAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKMRRNE*KVYKHW
Trigger: CCAATGCTTGTAGACCTTCCATTCATTCCGTCTCAT...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGGTGAGAAGACAGTCCTaGAGAAGGTCAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLVRRQS*RRSGDG
Trigger: TCCATCACCTGACCTTCTCCAGGACTGTCTTCTCAC...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGGGCTTTGTCACCAGCTaGGTCTTGTATCAATACCAG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLGFVTS*VLYQYQ
Trigger: CTGGTATTGATACAAGACCCAGCTGGTGACAAAGCC...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGTGGACCCCCAGGATTaGAGGCTTTGTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPVDPQD*RLCHQL
Trigger: CAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCAC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCAGGCCCATCCAGAGTaGAACTGGGGGCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPQAHPE*NWGLRP
Trigger: TGGTCTTAGCCCCCAGTTCCACTCTGGATGGGCCTG...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCAATATAGAAACATTTaGATTTACAAGGAACGTGGG +
Preference number: 4 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPQYRNI*IYKERG
Trigger: CCCACGTTCCTTGTAAATCCAAATGTTTCTATATTG...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGATCCAAGAGAGGAGTaGAGAAGGGCAGATCCCCTC +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETDPREE*RRADPL
Trigger: GAGGGGATCTGCCCTTCTCCACTCCTCTCTTGGATC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGAAGGCGGTTGAGGGACAGTCGTaGGTCGCCATAAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: TVMMMVVSLSFSVGISKAVEGQS*VAIRGV
Trigger: TACGCCCCTTATGGCGACCCACGACTGTCCCTCAAC...CGCCTTCGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGTCTGCATCTGGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCCCCAATTGGCCGTGGACAGGGTaGAGTCCTCGAAATTGGACA +
Preference number: 4 (lower is better)
Translates to: GLHLGQVHLVKGDGHLPNWPWTG*SPRNWT
Trigger: TGTCCAATTTCGAGGACTCCACCCTGTCCACGGCCA...ATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCTAAGGGTGCGGGGTCGCTaGCATTTCGGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LGFAGQGYWQSHPVPKALRVRGR*HFGSPV
Trigger: CACGGGAGAGCCGAAATGCCAGCGACCCCGCACCCT...TAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CPSSASPPLARSSRTGRSVLLGS*VLQVRD
Trigger: ATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAAC...AGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTAGGGACAGACAGCTTTaGATGGGGTACTTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: DEAHERACDRVKRRMGLRRDRQL*MGYLVQ
Trigger: CTGCACTAAGTACCCCATCCAAAGCTGTCTGTCCCT...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp TGGGAATGTCAGGCCCAGGCTCGTGGACCCCCAGGATaGGAGGCTTTGTCACCAGCTGGGTCTTGTATCAAT +
Preference number: 4 (lower is better)
Translates to: WECQAQARGPPG*EALSPAGSCIN
Trigger: ATTGATACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACGAGCCTGGGCCTGACATTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp GGGGTCGTTGCGGCTGAAGCGGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTGCACCACCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: GVVAAEAVIVQD*EVEDPLHHLLI
Trigger: TATGAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGCCGCAACGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CTTCCAGGACAGGTAGATCTTGCCGATGACGTCATTGCGGCTGAGCTTGTCCTTAGTTGTAGCCGACACTaGACTGGATCCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPGQVDLADDVIAAELVLSCSRH*TGSGPG
Trigger: ACCTGGGCCGGATCCAGTTCAGTGTCGGCTACAACT...AAGGACAAGCTCAGCCGCAATGACGTCATCGGCAAGATCTACCTGTCCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGAGTTGTAGCCGACACTaGACTGGATCCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISSCSRH*TGSGPG
Trigger: ACCTGGGCCGGATCCAGTTCAGTGTCGGCTACAACT...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATGGGGTCGTTGCGGCTaGAGCGGTCATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGWGRCG*SGHSPG
Trigger: TCCTGGACTATGACCGCTTCAGCCGCAACGACCCCA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACACGATGAGACGGAATaGATGGAAGGTCTACAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLHDETE*MEGLQA
Trigger: TGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTAGAGACCACGCACGATaGGACGGAATGAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAGYILSSTFRAQPAPETRDHAR*DGMNGR
Trigger: CCTTCCATTCATTCCGTCTCATCGTGCGTGGTCTCT...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTCCCTGCACTGTGAGTaGGTCGGGCAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQSLHCE*VGQKEL
Trigger: CAGCTCCTTCTGCCCGACTCACTCACAGTGCAGGGA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGTTCACCTACTATGTATaGTGTTCCTCCAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLFTYYV*CSSRSQ
Trigger: CTGGGATCTGGAGGAACATCATACATAGTAGGTGAA...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp ATAGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTGGAGGAAGAGCGGGTTaGGGGACAGTCGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: IGKTFKEEGLVPVGVQVLGGRAG*GTVVGR
Trigger: GCGACCCACGACTGTCCCTCAACCCGCTCTTCCTCC...AAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCATATTCTATAGAGATCTaGGGATGGCTGGACACTCGG +
Preference number: 4 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAYSIEI*GWLDTR
Trigger: CCGAGTGTCCAGCCATCCTCAGATCTCTATAGAATA...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGACCAGGTTCTCTCGGCTaGAACCCTCGTGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGPGSLG*NPRGPH
Trigger: ATGAGGCCCACGAGGGTTGCAGCCGAGAGAACCTGG...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTTTGGTCTCCAGCTTGTaGTTCTTGTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPLVSSL*FLSGSR
Trigger: CCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAA...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GTTCACGATGATGGAGTTGGCAGAGGGGTTGTAGCAGAGAGACAAGAGCAGCTCATCATGTCCTTCCAGTaGTTCACCTCCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VHDDGVGRGVVAERQEQLIMSFQ*FTSPGP
Trigger: CGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGAT...GAGCTGCTCTTGTCTCTCTGCTACAACCCCTCTGCCAACTCCATCATCGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGGCAAAGAGGAAATCTTaGTGGCTTAGAGGGTATGTG +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWAKRKS*WLRGYV
Trigger: CACATACCCTCTAAGCCAGCAAGATTTCCTCTTTGC...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGGATGGGGATGGTTATTaGTTTGTTGTGGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLDGDGY*FVVARR
Trigger: TCTTCTGGCCACAACAAAGCAATAACCATCCCCATC...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GCTGAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: AEAVIVQDLEVEDPLHHLKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...AAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GACTCAAGGGTAGTGGCCGTGGACAGGGTGGAGTCCTCGAAACACGACAACGGACAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: DSRVVAVDRVESSKHDNGQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...TCCGTTGTCGTGTTTCGAGGACTCCACCCTGTCCACGGCCACTACCCTTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539246.5
CDS-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCACGCACACACACAATaGACACAACACGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: VKRRMGLRWPQLALEALWHAHTQ*TQHEYK
Trigger: TTTGTACTCGTGTTGTGTCCATTGTGTGTGTGCGTG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAACAGGCCCATCCAGAGTaGAACTGGGGGCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEQAHPE*NWGLRP
Trigger: TGGTCTTAGCCCCCAGTTCCACTCTGGATGGGCCTG...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCAAGCCTGGTCGCTAATGTGCCTGGGTGGGGTCTGGTTGGGAAGAGACCCCTGCCGTTCGAAGGAAAATaGTTCCCAAATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: PSLVANVPGWGLVGKRPLPFEGK*FPNANG
Trigger: ACCATTGGCATTTGGGAACCATTTTCCTTCGAACGG...CAGGGGTCTCTTCCCAACCAGACCCCACCCAGGCACATTAGCGACCAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCCAGAAAATTTCGGTATaGGCAAAAGGCGACCCGTCT +
Preference number: 4 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSQKISV*AKGDPS
Trigger: AGACGGGTCGCCTTTTGCCCATACCGAAATTTTCTG...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAGGGCACCCACAAAGATaGCAGACGAAGCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSGHPQR*QTKPMK
Trigger: TTTCATGGGCTTCGTCTGCCATCTTTGTGGGTGCCC...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCTCGCGTTCTGGTTCTGCTaGGTTCCTGGGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAVIVQDLEVEDPLHHLLAFWFC*VPGFCR
Trigger: CCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGC...GAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCATGGTGGTGGGAAAGCTaGAGCGTCCCCCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSWWWES*SVPLWF
Trigger: AAACCAAAGGGGGACGCTCCAGCTTTCCCACCACCA...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAGAAAGGGCAGGGGATaGGGATGGTTATTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHRKGRG*GWLLLC
Trigger: ACAAAGCAATAACCATCCCCATCCCCTGCCCTTTCT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp AGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTaGCTCACGGGTAGCACCTTCGGAGTCCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RWALQSGFGNYT*LTGSTFGVLLP
Trigger: AGGCAGGAGGACTCCGAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTTTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACTCCACTCCAGGTGCTaGCTTAAAGAAAATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSLHSRC*LKENGG
Trigger: TCCCCCATTTTCTTTAAGGCAGCACCTGGAGTGGAG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCTCTCTCCACTCCAGGTaGTGCCTTAAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRASLHSR*CLKENG
Trigger: CCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGA...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTCCTGGTCTTTTCCCTaGCTCCTTTCCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDISWSFP*LLSLHC
Trigger: ACAGTGCAGGGAAAGGAGGCAGGGAAAAGACCAGGA...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAAAAAATGGGGAGCCGTTaGCCCGCCCACTCGATACAA +
Preference number: 4 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEKMGSR*PAHSIQ
Trigger: TTGTATCGAGTGGGCGGGGCAACGGCTCCCCATTTT...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GAAGGACTCATTGAAGATGGGGTTCAGGTTCCTCTTCATCGTCACCGTCTTCTTTGGCTCAGCGGCTGTTaGAGGCTCTGCTGCCGCATC +
Preference number: 4 (lower is better)
Translates to: EGLIEDGVQVPLHRHRLLWLSGC*RLCCRI
Trigger: GATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCA...AAGAAGACGGTGACGATGAAGAGGAACCTGAACCCCATCTTCAATGAGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp TGCATGGCTTCAGATCCTTCCAGAAGGTCTGCATCTGGGTCAGGTCCACCTTGTAAGGTCTCGTTCCAGTaGGGGTTCAGGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CMASDPSRRSASGSGPPCKVSFQ*GFRFFR
Trigger: GCGGAAGAACCTGAACCCCCACTGGAACGAGACCTT...ACAAGGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGATCTGAAGCCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGACCCTCAGCTTCTCCGTaGGGATATCGAAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGPSASP*GYRRRR
Trigger: CCTTCGCCTTCGATATCCCCACGGAGAAGCTGAGGG...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CCA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATGGAGATGAGTCCTGGTaGAATGCTATGCACACAGTA +
Preference number: 4 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYGDESW*NAMHTV
Trigger: TACTGTGTGCATAGCATTCCACCAGGACTCATCTCC...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGAACTCACAGAATCCTaGTCTTTTCCCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAELTES*SFPCLL
Trigger: AAGGAGGCAGGGAAAAGACCAGGATTCTGTGAGTTC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAAGAGGAGGATGCAGTTaGGGCCGACCCCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLRGGCS*GRPHFK
Trigger: CTTAAAATGGGGTCGGCCCCAACTGCATCCTCCTCT...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCCCCTGGCTTGTTTGTaGCTGTTTTCCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QRATAPGPRSGLYTILDIPLACL*LFSSVP
Trigger: AGGGACAGAGGAAAACAGCCACAAACAAGCCAGGGG...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACAAGAGGAAATCTTGCTaGCTTAGAGGGTATGTGTGG +
Preference number: 4 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHKRKSC*LRGYVW
Trigger: CCACACATACCCTCTAAGCCAGCAAGATTTCCTCTT...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp CCCCTGAGCGTTCTGGTTCTGCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLSVLVLLGSWV*QVRDIGKVILF
Trigger: GAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGAACGCTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCAGGCGAAGGACTCATTaGAGATGGGGTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGRRRTH*RWGSGS
Trigger: GGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCT...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGCTGGAGAAGGTCAGGTaGTGGACGATCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQLEKVR*WTIRDH
Trigger: GTGGTCTCTGATCGTCCATCACCTGACCTTCTCCAG...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGTAGCACCTTCCTTCTaGAGTACCCTGAGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGVAPSF*STLRAA
Trigger: CGCAGCTCTCAGGGTACTTCAGAAGGAAGGTGCTAC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGATTCATGGAGAGCGCCTaGACAGAAGCTCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGFMESA*TEALAK
Trigger: CTTGGCCAGAGCTTCTGTTCAGGCGCTCTCCATGAA...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTTGGTCTCCAGCTTGTaGTTCTTGTCGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFLVSSL*FLSGSR
Trigger: CCTGCTGCCCGACAAGAAGCACAAGCTGGAGACCAA...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATCCTTCCAGAAGGTCTaGATCTGGGTCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGSFQKV*IWVRST
Trigger: GGTGGACCTGACCCAGATGCAGACCTTCTGGAAGGA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCCACTCCCATCGCTaGATGGCTTCAGATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFSHSHR*MASDPS
Trigger: GGAAGGATCTGAAGCCATGCAGCGATGGGAGTGGGA...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTACCAGGAGATGCTCTCTaGATAGGATTGGCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLPGDAL*IGLAKS
Trigger: GCTCTTAGCCAATCCTATGCAGAGAGCATCTCCTGG...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAAGTTCCCCCATTCTCTaGTCTCCTATTGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLSSPIL*SPIALD
Trigger: GTCTAGGGCAATAGGAGAGCAGAGAATGGGGGAACT...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGGGGCAGGTGGGCCTTaGAGTCAGGATTCGGTAATT +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQGAGGP*SQDSVI
Trigger: AATTACCGAATCCTGACTGCAAGGCCCACCTGCCCC...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ATAGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCTCGGTTTCGAATCTaGCCCACCACGTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IGKTFKEEGLVPVGVQVLPRFRI*PTTWSQ
Trigger: CTGGGACCACGTGGTGGGGCAGATTCGAAACCGAGG...AAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR GCA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACATGACAATGGGGATGTaGTCGTTCCTTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYMTMGM*SFLLCL
Trigger: CAGGCACAAAAGGAACGAGCACATCCCCATTGTCAT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAATTGGCCGGCAGCTCCTaGGCCTTCATGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: GFLGFAGQGYWQSHPVPKLAGSS*AFMIFT
Trigger: CGTGAAGATCATGAAGGCCCAGGAGCTGCCGGCCAA...TTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GAAGCGGTCATAGTCCAGGACTTGGAGGTAGAGGATCCTCTGCACCACCTTCTCACTCCCATCGCTGCATaGCTTCAGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EAVIVQDLEVEDPLHHLLTPIAA*LQILPE
Trigger: TTCTGGAAGGATCTGAAGCCATGCAGCGATGGGAGT...GAGAAGGTGGTGCAGAGGATCCTCTACCTCCAAGTCCTGGACTATGACCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTAGGGGTCTGCCTGTCTaGCCGTCTGGCTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFRGLPV*PSGSRA
Trigger: AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCT...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGTCCACATCGGGGGCTaGAGAGGGAGTGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFVHIGG*RGSGLS
Trigger: AGAGAGGCCACTCCCTCTCCAGCCCCCGATGTGGAC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGGTGAGAAGACAGTCCTaGAGAAGGTCAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVVRRQS*RRSGDG
Trigger: TCCATCACCTGACCTTCTCCAGGACTGTCTTCTCAC...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATCCCCTTCTTCTCTTTaGGGTGTCACAGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGSPSSL*GVTGPS
Trigger: GGATGGGCCTGTGACACCCCAAAGAGAAGAAGGGGA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGGGTCCTGGGGCGGGTaGAATTTGTACAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGGSWGG*NLYSTF
Trigger: GAAAGTGCTGTACAAATTCCACCCGCCCCAGGACCC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGATTGAGGGACAGTCGTaGGTCGCCATAAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQIEGQS*VAIRGV
Trigger: TACGCCCCTTATGGCGACCCACGACTGTCCCTCAAT...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTCCCCATGGATGGTGGTaGGAAAGCTGGAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFPHGWW*ESWSVP
Trigger: GGGGACGCTCCAGCTTTCCCACCACCATCCATGGGG...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGACCAGGGCTGCTTTCATaGAGAGCGCCTGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGPGLLS*RAPEQK
Trigger: CTTCTGTTCAGGCGCTCTCCATGAAAGCAGCCCTGG...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
3UTR CAA 72 bp CTCATCAGTGGCCGAGGCAGAGAAACCACAGCTTCTTaGTGTGTGGCAACCTCAGAACTCACAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: LISGRGRETTAS*CVATSELTESW
Trigger: CCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTCTCTGCCTCGGCCACTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp ATCTTGCCGATGACGTCATTGCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATGATGGTCGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ILPMTSLRLSLS*SMTVMMMVVSL
Trigger: GAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGAGGCGAAGGACTCATTaGAGATGGGGTTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQRRRTH*RWGSGS
Trigger: GGAACCTGAACCCCATCTTCAATGAGTCCTTCGCCT...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR TCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGATTGTGCATAAAGTGGTaGGGGCATGATGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGLCIKW*GHDGDL
Trigger: CAGGTCCCCATCATGCCCTCACCACTTTATGCACAA...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR TCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCACGATGAGACGGAATaGATGGAAGGTCTACAAGCA +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPHDETE*MEGLQA
Trigger: TGCTTGTAGACCTTCCATTCATTCCGTCTCATCGTG...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCTCTCCACTCCAGGTaGTGCCTTAAAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHSLHSR*CLKENG
Trigger: CCCATTTTCTTTAAGGCAGCACCTGGAGTGGAGAGA...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR GCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGCCTGGTCGCTAATGTaGCTGGGTGGGGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFAWSLM*LGGVWL
Trigger: CAACCAGACCCCACCCAGGCACATTAGCGACCAGGC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTTCGGTAATTACACTTTaGTCACGGGTAGCACCTTCG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPSVITL*SRVAPS
Trigger: CGAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGA...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TTCTATAGAGATCTGAGGATGGCTGGACACTCGGGAAGGGCCTGGTCACCAGTGAAGGGAGATGAGTCCTaGTGGAATGCTATGCACACA +
Preference number: 4 (lower is better)
Translates to: FYRDLRMAGHSGRAWSPVKGDES*WNAMHT
Trigger: TGTGTGCATAGCATTCCACCAGGACTCATCTCCCTT...CACTGGTGACCAGGCCCTTCCCGAGTGTCCAGCCATCCTCAGATCTCTATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTACAGCTTCTTTGTGTGTaGCAACCTCAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLQLLCV*QPQNSQ
Trigger: CTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTG...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCAGCTTCTTTGTGTGTaGCAACCTCAGAACTCACAG +
Preference number: 4 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPQLLCV*QPQNSQ
Trigger: CTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTG...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAGGGCACCCACAAAGATaGCAGACGAAGCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGGHPQR*QTKPMK
Trigger: TTTCATGGGCTTCGTCTGCCATCTTTGTGGGTGCCC...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGVLLGS*VLQVRD
Trigger: ATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAAC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGCAAGGCTTGTCCTTCTaGTTGTCTTTGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQQGLSF*LSLRGR
Trigger: CCTCCCACGCAAAGACAACCAGAAGGACAAGCCTTG...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR TCA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCAACAGAGATCAGAAGTaGTATCTAAACCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PQLQDPGAGYILSSTFRANRDQK*YLNQVV
Trigger: CACAACCTGGTTTAGATATCACTTCTGATCTCTGTT...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR GCA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGCAAAGAGGAAATCTTaGTGGCTTAGAGGGTATGTG +
Preference number: 4 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHAKRKS*WLRGYV
Trigger: CACATACCCTCTAAGCCAGCAAGATTTCCTCTTTGC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCTCTTCCGCTTCACCTTaGTCTCCAGCTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RENLQRGRSRSSGGSGSSSSASP*SPACAS
Trigger: AGAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGA...GGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCCAGAAGGTCTGCATCTaGGTCAGGTCCACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFQKVCI*VRSTLL
Trigger: TAACAAGGTGGACCTGACCCAGATGCAGACCTTCTG...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAATGAGACGGAATGAATaGAAGGTCTACAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSMRRNE*KVYKHW
Trigger: CCAATGCTTGTAGACCTTCCATTCATTCCGTCTCAT...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAAAGAGGAAATCTTGCTaGCTTAGAGGGTATGTGTGG +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSKRKSC*LRGYVW
Trigger: CCACACATACCCTCTAAGCCAGCAAGATTTCCTCTT...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGCAGGTCAGGGATATTaGCAAAGTCATCCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: GAGGICTALSWGDGHKKGAGQGY*QSHPVP
Trigger: CGGAACAGGATGACTTTGCCAATATCCCTGACCTGC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGTTCTGCTGGGTTCCTaGGTTTTGCAGGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GFLGFAGQGYWQSHPVPKVLLGS*VLQVRD
Trigger: ATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAAC...TTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTTTTGTGCCTGTGTCTaGACCAGATGTAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQFCACV*TRCSTF
Trigger: GAAGGTGCTACATCTGGTTCAGACACAGGCACAAAA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp GGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAATCTTCCGCTTCACCTTaGTCTCCAGCTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GFLGFAGQGYWQSHPVPKSSASP*SPACAS
Trigger: AGAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGA...TTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CCA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCCAATATAGAAACATTTaGATTTACAAGGAACGTGGG +
Preference number: 4 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSQYRNI*IYKERG
Trigger: CCCACGTTCCTTGTAAATCCAAATGTTTCTATATTG...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGATCCAAGAGAGGAGTaGAGAAGGGCAGATCCCCTC +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFDPREE*RRADPL
Trigger: GAGGGGATCTGCCCTTCTCCACTCCTCTCTTGGATC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp TCTGGTTCTGCTGGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATGCAGGTCAGGGATATTaGCAAAGTCATCCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SGSAGFLGFAGQGYWQSHAGQGY*QSHPVP
Trigger: CGGAACAGGATGACTTTGCCAATATCCCTGACCTGC...ATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCCAGCAGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR TCA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCATGGAACCTGTTCTATTaGGTGGAAGAGACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSWNLFY*VEETFL
Trigger: TAGAAAAGTCTCTTCCACTCAATAGAACAGGTTCCA...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGAAGGGCAGGCAAGCTaGAAAGCATGGAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFEGQAS*KAWRIG
Trigger: CCCTATTCTCCATGCTTTCCAGCTTGCCTGCCCTTC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTTCGGTAATTACACTTTaGTCACGGGTAGCACCTTCG +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFSVITL*SRVAPS
Trigger: CGAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGA...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTCAGAAAATTTCGGTATaGGCAAAAGGCGACCCGTCT +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFQKISV*AKGDPS
Trigger: AGACGGGTCGCCTTTTGCCCATACCGAAATTTTCTG...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGAAATGGTGGGGGTGTaGGATTTAATTTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQEMVGV*DLISEN
Trigger: ATTTTCTGAAATTAAATCGCACACCCCCACCATTTC...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR GCA 90 bp ACCACAGCTTCTTTGTGTGTGGCAACCTCAGAACTCACAGAATCCTGGTCTTTTGAAATGGTGGGGGTGTaGGATTTAATTTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TTASLCVATSELTESWSFEMVGV*DLISEN
Trigger: ATTTTCTGAAATTAAATCGCACACCCCCACCATTTC...AAAAGACCAGGATTCTGTGAGTTCTGAGGTTGCCACACACAAAGAAGCTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
3UTR CAA 72 bp ACAAAAAGCAGGGCCCATTCCCACAAAAATATGATTTaGCAAAGAGGAAATCTTGCTGGCTTAGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: TKSRAHSHKNMI*QRGNLAGLEGM
Trigger: CATACCCTCTAAGCCAGCAAGATTTCCTCTTTGCAAAATCATATTTTTGTGGGAATGGGCCCTGCTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCTGCCGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGG...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GGCCCCCTGCCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPLPPGTWSRPRCPAEPGVPLKS*AGSSWA
Trigger: GGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCAC...GCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGGGGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS GCA 90 bp GCCGAACAGCGCCGAGCCGCCTCCCTCCGGCCTGCGCGCCGCGTGTaGGCGCCGGAGCGTGTGTGTGTGTACGAGGCCGTGTGTATGTGT +
Preference number: 5 (lower is better)
Translates to: AEQRRAASLRPARRV*APERVCVYEAVCMC
Trigger: ACACATACACACGGCCTCGTACACACACACACGCTCCGGCGCGCACACGCGGCGCGCAGGCCGGAGGGAGGCGGCTCGGCGCTGTTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS-3UTR CAA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCCTCGGCCCACCGCTaGCCGCCCCAACATAGCATC +
Preference number: 5 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPPSAHR*PPQHSI
Trigger: GATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGGG...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS GCA 90 bp GCAGGCAACTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTGGCTCTaGACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCACCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGNLDKLSFPAARWL*TVRQRPLPALPPLP
Trigger: GGGCAGCGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535826.5
ENST00000540677.5
CDS CCA 90 bp CCTCCTGCAGGCAACTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCACCG +
Preference number: 5 (lower is better)
Translates to: PPAGNLDKLSFPAAR*LCTVRQRPLPALPP
Trigger: CGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCCTGCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535826.5
ENST00000540677.5
CDS-3UTR CAA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKVPLKS*AGSSWA
Trigger: GGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCAC...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCACGGATGGGCCTGCGTaGGCCTCAGCTAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPTDGPA*ASASSG
Trigger: TCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGT...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS CCA 90 bp ACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTaGCACGGGGGCTGTGTTCACCGCCTTCCCTCCTGCAGGCAACTT +
Preference number: 5 (lower is better)
Translates to: TWLGPAVGLIVGCLA*HGGCVHRLPSCRQL
Trigger: AAGTTGCCTGCAGGAGGGAAGGCGGTGAACACAGCCCCCGTGCCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263846.8
ENST00000535826.5
ENST00000540677.5
ENST00000542836.5
ENST00000545053.1
CDS-3UTR CAA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGVPLKS*AGSSWA
Trigger: GGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCAC...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCCGGCCATTTCTTCCGCTTCACCTaGGTCTCCAGCTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PPGTWSRPRCPAEPGPGHFFRFT*VSSLCF
Trigger: GAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAA...ATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CCGCCCGGTACTTGGAGCCGGCCGAGGTGCCCTGCCGAGCCTGGCCCCGGCCATGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: PPGTWSRPRCPAEPGPGHVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...ATGGCCGGGGCCAGGCTCGGCAGGGCACCTCGGCCGGCTCCAAGTACCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CCACCGCTGCCCGGCTCGCTGGGGGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTCCGATGTCCATGGCTTaGAGGTTCCGGGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: PPLPGSLGAAPPLLKASSPMSMA*RFRALM
Trigger: CATCAAAGCCCGGAACCTCAAAGCCATGGACATCGG...AGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCGAGCCGGGCAGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CAA 90 bp CGGCCAGGTGGCTCTGCACCGTCCGCCAGCGGCCTCTCCCCGCCTTGCCACCGCTCCACCCGCTTGTCCTaGTACATCAGCCATACCTTC +
Preference number: 5 (lower is better)
Translates to: RPGGSAPSASGLSPPCHRSTRLS*YISHTF
Trigger: GAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGA...GCGGTGGCAAGGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CAA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHAAAAT*APDRRV
Trigger: CACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGC...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGCCGCCCGGTACTaGGAGCCGGCCGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAPAARY*EPAEVP
Trigger: GGGCACCTCGGCCGGCTCCAAGTACCGGGCGGCAGG...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CCCGGCCATAGGCCCGGGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCACTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGC +
Preference number: 5 (lower is better)
Translates to: PGHRPGGWGLVPRPCGPALGSWV*QVRDIG
Trigger: GCCAATATCCCTGACCTGCAAAACCCAGGAACCCAG...TGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCTATGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CCCGGCCATAGGCCCGGGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCATCCACCCGCTTGTCCTaGTACATCAGCCATACCTTC +
Preference number: 5 (lower is better)
Translates to: PGHRPGGWGLVPRPCGPASTRLS*YISHTF
Trigger: GAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGA...TGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCCCGGGCCTATGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCGTCCCCTTCTTCTCTTaGGGGTGTCACAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPVPFFS*GCHRPI
Trigger: GATGGGCCTGTGACACCCCAAAGAGAAGAAGGGGAC...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACTCGATACAAGTTGGTaGGATCCCCAGGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRLDTSW*DPQGEG
Trigger: GCCTTCGCCCTGGGGATCCAACCAACTTGTATCGAG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCTGGGTGGGGTCTGGTaGGGAAGAGACCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGLGGVW*GRDPCQ
Trigger: CTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCAG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCTGGCTCAGCGGCTGTaGCAGGCTCTGCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGLAQRL*QALLPH
Trigger: ATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp TGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCTCCTTCTGGTTGTCTTaGCGTGGGAGGGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: WRASGGVCLSGRLALELPSFWLS*RGRERS
Trigger: GCTCCTCTCCCTCCCACGCAAAGACAACCAGAAGGA...GGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCGGCTTGTCCTTCTGGTaGTCTTTGCGTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPGLSFW*SLRGRE
Trigger: CTCCCTCCCACGCAAAGACAACCAGAAGGACAAGCC...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCACCTTGGTCTCCAGCTaGTGCTTCTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLTLVSS*CFLSGS
Trigger: GCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGT...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCACCGCTGCCCGGCTCGCTGGGGGCAGCCCCGCCGCTTCTCAAGGCGTCCTCTAAGGCGAAGGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PPLPGSLGAAPPLLKASSKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTT...AGAGGACGCCTTGAGAAGCGGCGGGGCTGCCCCCAGCGAGCCGGGCAGCGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CAA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATTGCCGATGACGTCATaGCGGCTGAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRLPMTS*RLSLSL
Trigger: CAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCCCTCGGCCCACCGCTaGCCGCCCCAACATAGCATC +
Preference number: 5 (lower is better)
Translates to: VKRRMGLRWPQLALEALWPSAHR*PPQHSI
Trigger: GATGCTATGTTGGGGCGGCAAGCGGTGGGCCGAGGG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACACGGATGGGCCTGCGTaGGCCTCAGCTAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHTDGPA*ASASSG
Trigger: TCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGT...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCCTGGCTCAGCGGCTGTaGCAGGCTCTGCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: GDGQSCPSSASPPLARSSLAQRL*QALLPH
Trigger: ATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGACTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGC +
Preference number: 5 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRLGSWV*QVRDIG
Trigger: GCCAATATCCCTGACCTGCAAAACCCAGGAACCCAG...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCTCCTGCAGGCAACTaGGACAAGTTGAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LAGLWRGLPVWPSGSRAPPPAGN*DKLSFP
Trigger: AGGGAAGCTCAACTTGTCCAAGTTGCCTGCAGGAGG...GGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS-3UTR CAA 90 bp GCCCACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGATCATTGCGGCTGAGCTaGTCCTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: AHLAGLWRGLPVWPSGSRSLRLS*SLSMTV
Trigger: CACTGTCATGGACAAGGACAAGCTCAGCCGCAATGA...TCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCAGGATTGGAGGCTTaGTCACCAGCTGGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRAPGLEA*SPAGSC
Trigger: ACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGG...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp TGCCGCCCCAACATAGCATCCCAGAGCTCCACCTGCACGTGGTGGTGGTGGGGCCGTGGACCCCCAGGATaGGAGGCTTTGTCACCAGCT +
Preference number: 5 (lower is better)
Translates to: CRPNIASQSSTCTWWWWGRGPPG*EALSPA
Trigger: AGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACG...GCCCCACCACCACCACGTGCAGGTGGAGCTCTGGGATGCTATGTTGGGGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCCTGGGTGGGGTCTGGTaGGGAAGAGACCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGLGGVW*GRDPCQ
Trigger: CTGGCAGGGGTCTCTTCCCAACCAGACCCCACCCAG...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp TGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCCTTCCAGGAAGGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: CSESPKTKDSTTIRPSRKAAAAT*APDRRV
Trigger: CACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGC...CTTCCTGGAAGGCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CAA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPAAAAT*APDRRV
Trigger: CACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGC...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGGGTTGGGGCCTGGTGCCGAGGCCATGTGGGCCTGCAGCTGGCCCAGGCTCTGTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GVGAWCRGHVGLQLAQALCRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...CAGAGCCTGGGCCAGCTGCAGGCCCACATGGCCTCGGCACCAGGCCCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp TTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTCTCCACCTTGGTCTCCAGCTaGTGCTTCTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQALLPHQGAGSLAFRLSTLVSS*CFLSGS
Trigger: GCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGT...GGAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGTTCTTCCGCTTCACCTaGGTCTCCAGCTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GGTWLGPAVGLIVGCLAWFFRFT*VSSLCF
Trigger: GAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAA...CCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CTGGCTCAGCGGCTGTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGTCATTGCGGCTGAGCTaGTCCTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: LAQRLLQALLPHQGAGSLSLRLS*SLSMTV
Trigger: CACTGTCATGGACAAGGACAAGCTCAGCCGCAATGA...CAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GGGCTGCCGGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCTTGCCGATGACGTCATaGCGGCTGAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLPGTGNHVLPVLHLPWPLPMTS*RLSLSL
Trigger: CAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAA...GGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCCGGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: DEAHERACDRVKRRMGLRRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCACCTCGATACAAGTTGGTaGGATCCCCAGGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: QVGWIPRAKAPGRWGLAHLDTSW*DPQGEG
Trigger: GCCTTCGCCCTGGGGATCCAACCAACTTGTATCGAG...GTGAGCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGATCTGGCTCAGCGGCTGTaGCAGGCTCTGCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: PVLHLPWPALPGQVDLADLAQRL*QALLPH
Trigger: ATGCGGCAGCAGAGCCTGCAACAGCCGCTGAGCCAG...ATCGGCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTGACAGGAGGGTGCCATaGATAGCCTTCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRADRRVP*IAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAATGGCACCCTCCTGTC...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS-3UTR CAA 90 bp ACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TKGHSSRTQERAIYYPRHVPLKS*AGSSWA
Trigger: GGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCAC...ATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGCCGATGTCCATGGCTTaGAGGTTCCGGGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKPMSMA*RFRALM
Trigger: CATCAAAGCCCGGAACCTCAAAGCCATGGACATCGG...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCCCACTCGATACAAGTaGGTTGGATCCCCAGGGCGA +
Preference number: 5 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWPTRYK*VGSPGR
Trigger: TCGCCCTGGGGATCCAACCAACTTGTATCGAGTGGG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGAGGAACGTGGCTCGGTCCGGCGGTCGGACTCATCGTGGGGTGTCTGGCCTGGGTGGAGTCCTCGAAATaGGACAAGTTGAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GGTWLGPAVGLIVGCLAWVESSK*DKLSFP
Trigger: AGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCAC...CCAGGCCAGACACCCCACGATGAGTCCGACCGCCGGACCGAGCCACGTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539468.5
CDS-3UTR CAA 90 bp GTTGCAGGCTCTGCTGCCGCATCAGGGTGCGGGGTCGCTGGCATTTCGGCTCTCCTGGGTTCCTGGGTTTaGCAGGTCAGGGATATTGGC +
Preference number: 5 (lower is better)
Translates to: VAGSAAASGCGVAGISALLGSWV*QVRDIG
Trigger: GCCAATATCCCTGACCTGCAAAACCCAGGAACCCAG...GAGAGCCGAAATGCCAGCGACCCCGCACCCTGATGCGGCAGCAGAGCCTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGACAGGAGGGTGCCATaGAGGGACAGTCGTGGGTCG +
Preference number: 5 (lower is better)
Translates to: QDPGAGYILSSTFRAQPADRRVP*RDSRGS
Trigger: CGACCCACGACTGTCCCTCAATGGCACCCTCCTGTC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp ACCACCCTTACCTCCCGTGCTAGCCTACCCGGCCCTCGGCCCACCGCTTGCCGCCAGACACAGAGCTCATaGTCTTTCCTTTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: TTLTSRASLPGPRPTACRQTQSS*SFLFPP
Trigger: AGGTGGGAAAAGGAAAGACAATGAGCTCTGTGTCTG...GCGGCAAGCGGTGGGCCGAGGGCCGGGTAGGCTAGCACGGGAGGTAAGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp ACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: TQERAIYYPRHSGPSRHLSLVRE*TRSETE
Trigger: CTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGA...CAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: PSSASPPLARSSRTGRSCSLVRE*TRSETE
Trigger: CTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGA...GCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGGTGCCGCTGAAGTCCTaGGCCGGCAGCTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISVPLKS*AGSSWA
Trigger: GGCCCAGGAGCTGCCGGCCAAGGACTTCAGCGGCAC...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTGGGGCGGGTGGAATTaGTACAGCACTTTCATGGGG +
Preference number: 5 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGWGGWN*YSTFMG
Trigger: CCCCATGAAAGTGCTGTACAAATTCCACCCGCCCCA...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGCTGGAGCGTCCCCCTTaGGTTTGTCTGAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VKRRMGLRWPQLALEALWLERPP*VCLSCL
Trigger: AAGGCAGCTCAGACAAACCAAAGGGGGACGCTCCAG...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTGAGGGACAGACAGCTTaGGATGGGGTACTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGEGQTA*DGVLSA
Trigger: TGCACTAAGTACCCCATCCAAAGCTGTCTGTCCCTC...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCCCGATGTCCATGGCTTaGAGGTTCCGGGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGPMSMA*RFRALM
Trigger: CATCAAAGCCCGGAACCTCAAAGCCATGGACATCGG...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGGCTGGTACTTCCTAGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: GLVLPRNGAQLSPGTPPWRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAGGACAAGCTCAGCCG...CCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCTAGGAAGTACCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCATTGCGGCTGAGCTaGTCCTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGSLRLS*SLSMTV
Trigger: CACTGTCATGGACAAGGACAAGCTCAGCCGCAATGA...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGTTGCCGATGACGTCATaGCGGCTGAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VKRRMGLRWPQLALEALWLPMTS*RLSLSL
Trigger: CAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAA...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCATTGCCGATGACGTCATaGCGGCTGAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTGNHVLPVLHLPWPALPLPMTS*RLSLSL
Trigger: CAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAA...TGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp AAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAAGAAACGGGGCCCAGTaGAGTCCTGGGACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: KGHSSRTQERAIYYPRHSRNGAQ*SPGTPP
Trigger: GGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT...TGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTGTCCCCTTCTTCTCTTaGGGGTGTCACAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: DEAHERACDRVKRRMGLRVPFFS*GCHRPI
Trigger: GATGGGCCTGTGACACCCCAAAGAGAAGAAGGGGAC...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp ACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGAAGGCGCGGAGGAAGAGCGGGTaGAGGGACAGTCGTGGGTCG +
Preference number: 5 (lower is better)
Translates to: TVMMMVVSLSFSVGISKARRKSG*RDSRGS
Trigger: CGACCCACGACTGTCCCTCAACCCGCTCTTCCTCCG...CGCCTTCGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCATCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSSLVRE*TRSETE
Trigger: CTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGA...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCCGCTTGTCCTTGTACATCAGCCATACCTTCACGTAGGGGTCTGATGTGCCCCTCGCTGGTGAGGGAGTaGACGAGGTCTGAGACGGAG +
Preference number: 5 (lower is better)
Translates to: PACPCTSAIPSRRGLMCPSLVRE*TRSETE
Trigger: CTCCGTCTCAGACCTCGTCAACTCCCTCACCAGCGA...GGGGCACATCAGACCCCTACGTGAAGGTATGGCTGATGTACAAGGACAAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp TTCGGCTCTCCCGTGGAGCTGGGGATAGACTCAAGGGTAGTGGCCGTGGACAGGGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: FGSPVELGIDSRVVAVDRVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...CCTGTCCACGGCCACTACCCTTGAGTCTATCCCCAGCTCCACGGGAGAGCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp AGAAACGGGGCCCAGTTGAGTCCTGGGACCCCTCCCTGGCTGAGCCCTCAGGGTTTGAGGTTCCGGGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: RNGAQLSPGTPPWLSPQGLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCCCGGAACCTCAA...ACCCTGAGGGCTCAGCCAGGGAGGGGTCCCAGGACTCAACTGGGCCCCGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCATTGCCGATGACGTCATaGCGGCTGAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QDPGAGYILSSTFRAQPALPMTS*RLSLSL
Trigger: CAAGGACAAGCTCAGCCGCAATGACGTCATCGGCAA...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGGAAACCACAGCTTCTTaGTGTGTGGCAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKETTAS*CVATSE
Trigger: TTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTC...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTACCAGGATTGGAGGCTTaGTCACCAGCTGGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLPGLEA*SPAGSC
Trigger: ACAAGACCCAGCTGGTGACAAAGCCTCCAATCCTGG...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCCTGGAACCTGTTCTATaGAGTGGAAGAGACTTTTCT +
Preference number: 5 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLLEPVL*SGRDFS
Trigger: AGAAAAGTCTCTTCCACTCAATAGAACAGGTTCCAG...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS TCA 90 bp CAGGAGGGTGCCATTGATAGCCTTCTTCTCACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGTCTCCAAGGAATTCTTGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: QEGAIDSLLLTAPTP*VWRAHRLQGILVAF
Trigger: AAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGGCTATCAATGGCACCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS-3UTR CAA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTCCTCCTGCAGGCAACTaGATAGCCTTCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: DEAHERACDRVKRRMGLRPPAGN*IAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAAGTTGCCTGCAGGAGG...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS-3UTR CAA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCAACCTTGGTCTCCAGCTaGTGCTTCTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSTLVSS*CFLSGS
Trigger: GCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGT...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGTCTGCATCTGGGTCAGGTCCACCTTGTTAAGGGGGATGGACACCTCCCCAATACCTTGGTCTCCAGCTaGTGCTTCTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GLHLGQVHLVKGDGHLPNTLVSS*CFLSGS
Trigger: GCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGT...ATTGGGGAGGTGTCCATCCCCCTTAACAAGGTGGACCTGACCCAGATGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACACCTTGGTCTCCAGCTaGTGCTTCTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: HNTSTKGHSSRTQERAIYTLVSS*CFLSGS
Trigger: GCTGCCCGACAAGAAGCACAAGCTGGAGACCAAGGT...GTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCTTGAGGTTCCGGGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: GDGQSCPSSASPPLARSSLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCCCGGAACCTCAA...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTTCCACCCGCTTGTCCTaGTACATCAGCCATACCTTC +
Preference number: 5 (lower is better)
Translates to: DEAHERACDRVKRRMGLRSTRLS*YISHTF
Trigger: GAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGA...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAAGGCGAAGGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PGPRSGLYTILDIQGPAGKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTT...GCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCAGGACAGGTAGATCTTGCCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: PSSASPPLARSSRTGRSCRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAGGACAAGCTCAGCCG...GCAAGATCTACCTGTCCTGGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGTCACCAGCTGGGTCTaGTATCAATACCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAVTSWV*YQYQDQ
Trigger: CTGGTCCTGGTATTGATACAAGACCCAGCTGGTGAC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGTCACCAGCTGGGTCTaGTATCAATACCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSVTSWV*YQYQDQ
Trigger: CTGGTCCTGGTATTGATACAAGACCCAGCTGGTGAC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTACGTGGACCCCCAGGATaGGAGGCTTTGTCACCAGCT +
Preference number: 5 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLRGPPG*EALSPA
Trigger: AGCTGGTGACAAAGCCTCCAATCCTGGGGGTCCACG...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGGGAGGGGCAGGTGGGCCTTGCAGTCAGGATTCGGTAATTACACTTTGCTCACCCACTCGATACAAGTaGGTTGGATCCCCAGGGCGA +
Preference number: 5 (lower is better)
Translates to: GGGAGGPCSQDSVITLCSPTRYK*VGSPGR
Trigger: TCGCCCTGGGGATCCAACCAACTTGTATCGAGTGGG...TGAGCAAAGTGTAATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCGCTCTCTGCATAGGATaGGCTAAGAGCTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PQLQDPGAGYILSSTFRAALCIG*AKSSVG
Trigger: GCCCACAGAGCTCTTAGCCAATCCTATGCAGAGAGC...GGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CTGAGCTTGTCCTTGTCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCCGGAGGAAGAGCGGGTaGAGGGACAGTCGTGGGTCG +
Preference number: 5 (lower is better)
Translates to: LSLSLSMTVMMMVVSLSFRRKSG*RDSRGS
Trigger: CGACCCACGACTGTCCCTCAACCCGCTCTTCCTCCG...GAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGACAAGGACAAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGGCAACTTGGACAAGTaGAGCTTCCCTGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QRATAPGPRSGLYTILDIGNLDK*SFPAAR
Trigger: CCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS-3UTR CAA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATCGGCGTGCTCAAGGCTaGTCCTTCTGGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYRRAQG*SFWLSL
Trigger: CAAAGACAACCAGAAGGACAAGCCTTGAGCACGCCG...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS TCA 90 bp TCCTGCAGGCAACTTGATAGCCTTCTTCTCACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGTCTCCAAGGAATTCTTGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: SCRQLDSLLLTAPTP*VWRAHRLQGILVAF
Trigger: AAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGGCTATCAAGTTGCCTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000545053.1
CDS-3UTR CAA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATTTCTTCCGCTTCACCTaGGTCTCCAGCTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYFFRFT*VSSLCF
Trigger: GAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAA...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTCCGATGTCCATGGCTTaGAGGTTCCGGGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: GAGYILSSTFRAQPAPETPMSMA*RFRALM
Trigger: CATCAAAGCCCGGAACCTCAAAGCCATGGACATCGG...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp TGGACACAACACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATTCCACCCGCTTGTCCTaGTACATCAGCCATACCTTC +
Preference number: 5 (lower is better)
Translates to: WTQHEYKGPQLQDPGAGYSTRLS*YISHTF
Trigger: GAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGA...ATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGTGTTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GCGTCCCCCTTTGGTTTGTCTGAGCTGCCTTGGAGGGTGGCAAGTGTCCTCTGGAAGGCGAAGGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ASPFGLSELPWRVASVLWKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTT...CCAGAGGACACTTGCCACCCTCCAAGGCAGCTCAGACAAACCAAAGGGGGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CACCTGGCGGGCCTCTGGAGGGGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTAACGTGGGTGACTATTaGCTTTACATTAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: HLAGLWRGLPVWPSGSRANVGDY*LYISIL
Trigger: AAGAATGCTAATGTAAAGCAAATAGTCACCCACGTT...AGCTCGAGAGCCAGACGGCCAGACAGGCAGACCCCTCCAGAGGCCCGCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CCTCACCCGACCCCACTCAGCCCTATGGGCCTCTCCTCTCACACCCCCGGCCTCAACGTGGGTGACTATTaGCTTTACATTAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: PHPTPLSPMGLSSHTPGLNVGDY*LYISIL
Trigger: AAGAATGCTAATGTAAAGCAAATAGTCACCCACGTT...GAGGCCGGGGGTGTGAGAGGAGAGGCCCATAGGGCTGAGTGGGGTCGGGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GTGAAGAGACGGATGGGCCTGCGTTGGCCTCAGCTAGCTCTGGAGGCTCTGTGGTTCGGTAATTACACTTaGCTCACGGGTAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: VKRRMGLRWPQLALEALWFGNYT*LTGSTF
Trigger: GAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGAA...CCACAGAGCCTCCAGAGCTAGCTGAGGCCAACGCAGGCCCATCCGTCTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp ACGAGTACAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTAGGGGCAGGTGGGCCTaGCAGTCAGGATTCGGTAAT +
Preference number: 5 (lower is better)
Translates to: TSTKGHSSRTQERAIYYPRGRWA*QSGFGN
Trigger: ATTACCGAATCCTGACTGCAAGGCCCACCTGCCCCT...AGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTGTACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCAGTGGAGTCCTCGAAATaGGACAAGTTGAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QDPGAGYILSSTFRAQPAVESSK*DKLSFP
Trigger: AGGGAAGCTCAACTTGTCCAATTTCGAGGACTCCAC...TGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CAGGGTCCTCCCCTCCCTATGGCAGGGGGCTCAGGCCGGGCGTTGTGCATAAAGATGGTTATTGCTTTGTaGTGGCCAGAAGAAACAGGT +
Preference number: 5 (lower is better)
Translates to: QGPPLPMAGGSGRALCIKMVIAL*WPEETG
Trigger: ACCTGTTTCTTCTGGCCACAACAAAGCAATAACCAT...CTTTATGCACAACGCCCGGCCTGAGCCCCCTGCCATAGGGAGGGGAGGACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp TCTCTGCTCTCCTATTGCCCTAGACCGCCCCCGCCCCATCCCATACCACCCTTAGGATGGGGATGGTTATaGCTTTGTTGTGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: SLLSYCPRPPPPHPIPPLGWGWL*LCCGQK
Trigger: CTTCTGGCCACAACAAAGCAATAACCATCCCCATCC...TAAGGGTGGTATGGGATGGGGCGGGGGCGGTCTAGGGCAATAGGAGAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp AGGACCCAGGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACTTGAGGTTCCGGGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: RTQERAIYYPRHSGPSRHLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCCCGGAACCTCAA...GTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: GAGYILSSTFRAQPAPETRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAGGACAAGCTCAGCCG...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTGCTCTCTGCATAGGATaGGCTAAGAGCTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QRATAPGPRSGLYTILDIALCIG*AKSSVG
Trigger: GCCCACAGAGCTCTTAGCCAATCCTATGCAGAGAGC...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GATACAAGTTGGTTGGATCCCCAGGGCGAAGGCGCCTGGAAGGTGGGGGCTGGCTCTCTGTCTAGATCATaGATAGCCTTCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: DTSWLDPQGEGAWKVGAGSLSRS*IAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAATGATCTAGACAGAGA...GCCAGCCCCCACCTTCCAGGCGCCTTCGCCCTGGGGATCCAACCAACTTGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGGACGGGCAATCATGTCCTTCCAGTGCTTCACCTCCCCTGGCCCGCTCTTCCTCTCTGTCTAGATCATaGATAGCCTTCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: GDGQSCPSSASPPLARSSSLSRS*IAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAATGATCTAGACAGAGA...GGAAGAGCGGGCCAGGGGAGGTGAAGCACTGGAAGGACATGATTGCCCGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTTTCTTCCGCTTCACCTaGGTCTCCAGCTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: QRATAPGPRSGLYTILDIFFRFT*VSSLCF
Trigger: GAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAA...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTATCCACCCGCTTGTCCTaGTACATCAGCCATACCTTC +
Preference number: 5 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLSTRLS*YISHTF
Trigger: GAAGGTATGGCTGATGTACAAGGACAAGCGGGTGGA...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp TCCAGGAAGGATTTCATGTCCAAGCCTCGGTTTCGAATCTGCCCCACCACGTGGCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SRKDFMSKPRFRICPTTWRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAGGACAAGCTCAGCCG...CCACGTGGTGGGGCAGATTCGAAACCGAGGCTTGGACATGAAATCCTTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GACGAAGCCCATGAAAGGGCCTGCGACAGAGTGAAGAGACGGATGGGCCTGCGTGGGATGGTTATTGCTTaGTTGTGGCCAGAAGAAACA +
Preference number: 5 (lower is better)
Translates to: DEAHERACDRVKRRMGLRGMVIA*LWPEET
Trigger: TGTTTCTTCTGGCCACAACAAAGCAATAACCATCCC...ACGCAGGCCCATCCGTCTCTTCACTCTGTCGCAGGCCCTTTCATGGGCTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAATTCTTCCGCTTCACCTaGGTCTCCAGCTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEFFRFT*VSSLCF
Trigger: GAAGCACAAGCTGGAGACCAAGGTGAAGCGGAAGAA...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CAAAGGGCCACAGCTCCAGGACCCAGGAGCGGGCTATATACTATCCTCGACATTAAGGCGAAGGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QRATAPGPRSGLYTILDIKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTT...AATGTCGAGGATAGTATATAGCCCGCTCCTGGGTCCTGGAGCTGTGGCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp AGGGGTGGGGGAGCATCTCAGAGCAGGCATGGACGAAGACAGACCCAGAGAAGCGTTCAAGAGATGAAATaGCTGAGGAGGGAACTACTT +
Preference number: 5 (lower is better)
Translates to: RGGGASQSRHGRRQTQRSVQEMK*LRRELL
Trigger: AAGTAGTTCCCTCCTCAGCAATTTCATCTCTTGAAC...GCTTCTCTGGGTCTGTCTTCGTCCATGCCTGCTCTGAGATGCTCCCCCACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp GGAGCGGGCTATATACTATCCTCGACATTCAGGGCCCAGCCGGCACCTGAAACTGAAACCACAGCTTCTTaGTGTGTGGCAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GAGYILSSTFRAQPAPETETTAS*CVATSE
Trigger: TTCTGAGGTTGCCACACACAAAGAAGCTGTGGTTTC...AGTTTCAGGTGCCGGCTGGGCCCTGAATGTCGAGGATAGTATATAGCCCGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTGGGGCGGGTGGAATTaGTACAGCACTTTCATGGGG +
Preference number: 5 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQWGGWN*YSTFMG
Trigger: CCCCATGAAAGTGCTGTACAAATTCCACCCGCCCCA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGGCGGGTGGAATTTGTACAGCACTTTCATGGGGAGATGGTCACAAGAAAGGAGTCATAGTCCAGGACTaGGAGGTAGAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: GAGGICTALSWGDGHKKGVIVQD*EVEDPL
Trigger: CAGAGGATCCTCTACCTCCAAGTCCTGGACTATGAC...TCCTTTCTTGTGACCATCTCCCCATGAAAGTGCTGTACAAATTCCACCCGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAAGCCCTACCGATGTCCATGGCTTaGAGGTTCCGGGCTTTGATG +
Preference number: 5 (lower is better)
Translates to: LGFAGQGYWQSHPVPKALPMSMA*RFRALM
Trigger: CATCAAAGCCCGGAACCTCAAAGCCATGGACATCGG...TAGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCAAGGCGAAGGACTCATaGAAGATGGGGTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGKAKDS*KMGFRF
Trigger: GAACCTGAACCCCATCTTCAATGAGTCCTTCGCCTT...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGCGGCTGAGCTTGTCCTaGTCCATGACAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQRLSLS*SMTVMM
Trigger: CATCATCACTGTCATGGACAAGGACAAGCTCAGCCG...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263846.8
ENST00000539008.6
ENST00000540677.5
CDS-3UTR CAA 90 bp AGGGAAAACCTTCAAAGAGGAAGGTCTCGTTCCAGTGGGGGTTCAGGTTCTTCCTCATTGCGGCTGAGCTaGTCCTTGTCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: RENLQRGRSRSSGGSGSSSLRLS*SLSMTV
Trigger: CACTGTCATGGACAAGGACAAGCTCAGCCGCAATGA...GGAAGAACCTGAACCCCCACTGGAACGAGACCTTCCTCTTTGAAGGTTTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GGAGAAGGTCAGGTGATGGACGATCAGAGACCACGCACGATGAGACGGAATGAAATGTGCTCGTTCCTTTaGTGCCTGTGTCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: GEGQVMDDQRPRTMRRNEMCSFL*CLCLNQ
Trigger: CTGGTTCAGACACAGGCACAAAAGGAACGAGCACAT...TTCATTCCGTCTCATCGTGCGTGGTCTCTGATCGTCCATCACCTGACCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp CAAAGTCATCCTGTTCCGAAAGCCCTAAGACCAAGGATAGCACCACCATCCGGCTTGAGGTTCCGGGCTTaGATGATGTTCACGATGATG +
Preference number: 5 (lower is better)
Translates to: QSHPVPKALRPRIAPPSGLRFRA*MMFTMM
Trigger: CATCATCGTGAACATCATCAAAGCCCGGAACCTCAA...GCCGGATGGTGGTGCTATCCTTGGTCTTAGGGCTTTCGGAACAGGATGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp GTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGTGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VWPSGSRAPPTSLVLVSQCRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...CTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539008.6
CDS-3UTR CAA 90 bp GGTCTGCCTGTCTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTTCAAGAGATGAAATaGCTGAGGAGGGAACTACTT +
Preference number: 5 (lower is better)
Translates to: GLPVWPSGSRAPPTSLVLVQEMK*LRRELL
Trigger: AAGTAGTTCCCTCCTCAGCAATTTCATCTCTTGAAC...TAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAGACAGGCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp CTGGCCGTCTGGCTCTCGAGCTCCCCCAACTTCTTTAGTATTAGTAAGTCAGGATTCGGTAATTACACTTaGCTCACGGGTAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: LAVWLSSSPNFFSISKSGFGNYT*LTGSTF
Trigger: GAAGGTGCTACCCGTGAGCAAAGTGTAATTACCGAA...TCCTGACTTACTAATACTAAAGAAGTTGGGGGAGCTCGAGAGCCAGACGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000539008.6
CDS-3UTR CAA 90 bp GGGTTCCTGGGTTTTGCAGGTCAGGGATATTGGCAAAGTCATCCTGTTCCGAAATGCAGGTCAGGGATATaGGCAAAGTCATCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: GFLGFAGQGYWQSHPVPKCRSGI*AKSSCS
Trigger: GGAACAGGATGACTTTGCCAATATCCCTGACCTGCA...TTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACCCAGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS-3UTR CAA 90 bp TCCATGACAGTGATGATGATGGTCGTCTCCCTCAGCTTCTCCGTGGGGATATCGTCTCTGTCTAGATCATaGATAGCCTTCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: SMTVMMMVVSLSFSVGISSLSRS*IAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAATGATCTAGACAGAGA...CGATATCCCCACGGAGAAGCTGAGGGAGACGACCATCATCATCACTGTCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539246.5
ENST00000539468.5
CDS GCA 72 bp CGCCGCCGAACAGCGCCGAGCCGCCTCCCTCCGGCCTaGGCGCCGCGTGTGCGCGCCGGAGCGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: RRRTAPSRLPPA*APRVRAGACVC
Trigger: ACACACACACGCTCCGGCGCGCACACGCGGCGCGCAGGCCGGAGGGAGGCGGCTCGGCGCTGTTCGGCGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS GCA 72 bp CGCCGAGCCGCCTCCCTCCGGCCTGCGCGCCGCGTGTaGGCGCCGGAGCGTGTGTGTGTGTACGAGGCCGTG +
Preference number: 6 (lower is better)
Translates to: RRAASLRPARRV*APERVCVYEAV
Trigger: CACGGCCTCGTACACACACACACGCTCCGGCGCGCACACGCGGCGCGCAGGCCGGAGGGAGGCGGCTCGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263846.8
CDS CCA 72 bp GCGCCCCTGGGCTGGCCGCCTCCGGGTCCCGGTACATaGTCCCCTCGTCGCCGGTTCCCTCCGGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: APLGWPPPGPGT*SPRRRFPPGSS
Trigger: TGAGGAGCCCGGAGGGAACCGGCGACGAGGGGACCATGTACCGGGACCCGGAGGCGGCCAGCCCAGGGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263846.8
ENST00000535826.5
ENST00000539008.6
ENST00000542670.5
ENST00000545053.1
CDS CAA 90 bp AGCCGGCCTTCCCGCTCCACCGCCAGCCCCGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTGCCATTGAGGGACAGTCGTGGGTCG +
Preference number: 6 (lower is better)
Translates to: SRPSRSTASPAAAAT*APDRRVPLRDSRGS
Trigger: CGACCCACGACTGTCCCTCAATGGCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGCGGGGCTGGCGGTGGAGCGGGAAGGCCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535826.5
ENST00000539008.6
CDS CAA 90 bp AGCCGGCCTTCCCGCTCCACCGCCAGCCCCGCCGCGGCGGCCACTTaGGCGCCCGACAGGAGGGTGCCATTGATAGCCTTCTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: SRPSRSTASPAAAAT*APDRRVPLIAFFSL
Trigger: CAGTGAGAAGAAGGCTATCAATGGCACCCTCCTGTCGGGCGCCAAAGTGGCCGCCGCGGCGGGGCTGGCGGTGGAGCGGGAAGGCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS CCA 72 bp GGCAACTTGGACAAGTTGAGCTTCCCTGCGGCCAGGTaGCTCTGCACCGTCCGCCAGCGGCCTCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: GNLDKLSFPAAR*LCTVRQRPLPA
Trigger: GGCGGGGAGAGGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535826.5
ENST00000540677.5
CDS GCA 72 bp CCCTCCTGCAGGCAACTTGGACAAGTTGAGCTTCCCTaGGGCCAGGTGGCTCTGCACCGTCCGCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: PSCRQLGQVELP*GQVALHRPPAA
Trigger: GGCCGCTGGCGGACGGTGCAGAGCCACCTGGCCGCAGGGAAGCTCAACTTGTCCAAGTTGCCTGCAGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535826.5
ENST00000540677.5
CDS GCA 72 bp CCTTCTTCTCACTGCGCCCACGCCCTGAGTCTGGCGTaGCCACCGTCTCCAAGGAATTCTTGTAGCGTTTGC +
Preference number: 6 (lower is better)
Translates to: PSSHCAHALSLA*PPSPRNSCSVC
Trigger: GCAAACGCTACAAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263846.8
ENST00000535826.5
ENST00000539008.6
ENST00000539246.5
ENST00000539468.5
ENST00000540677.5
ENST00000542670.5
ENST00000542836.5
ENST00000545053.1
CDS TCA 72 bp GCCATTGATAGCCTTCTTCTCACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGTCTCCAAGGAATTCTT +
Preference number: 6 (lower is better)
Translates to: AIDSLLLTAPTP*VWRAHRLQGIL
Trigger: AAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGGCTATCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540677.5
CDS TCA 72 bp CAACTTGATAGCCTTCTTCTCACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGTCTCCAAGGAATTCTT +
Preference number: 6 (lower is better)
Translates to: QLDSLLLTAPTP*VWRAHRLQGIL
Trigger: AAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGGCTATCAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263846.8
ENST00000545053.1
CDS TCA 72 bp ATCATTGATAGCCTTCTTCTCACTGCGCCCACGCCCTaGGTCTGGCGTGCCCACCGTCTCCAAGGAATTCTT +
Preference number: 6 (lower is better)
Translates to: IIDSLLLTAPTP*VWRAHRLQGIL
Trigger: AAGAATTCCTTGGAGACGGTGGGCACGCCAGACTCAGGGCGTGGGCGCAGTGAGAAGAAGGCTATCAATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535826.5
ENST00000539008.6
ENST00000539246.5
ENST00000539468.5
ENST00000542670.5
ENST00000542836.5
CDS CCA 72 bp TCTCATGGGATTCCCTCAACAATTCTCCAAGGTGAATaGCATCTCGTCCATCTTACAGATGAGGCTCAGACG +
Preference number: 6 (lower is better)
Translates to: SHGIPSTILQGE*HLVHLTDEAQT
Trigger: CGTCTGAGCCTCATCTGTAAGATGGACGAGATGCCATTCACCTTGGAGAATTGTTGAGGGAATCCCATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540831.1