RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT16 (Homo sapiens)

Ensembl gene IDs: ENSG00000139973

Ensembl transcript IDs: ENST00000430451.3, ENST00000554138.1, ENST00000555409.1, ENST00000568344.5, ENST00000636133.1, ENST00000683842.1

Found 587 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCCAGGAGTTGACACCACTTCGGTCCTTATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGTGAGCTTCTGGCTGGCGGCTCTATA +
Preference number: 1 (lower is better)
Translates to: LPGVDTTSVLIWEAL*PHNGHCELLAGGSI
Trigger: TATAGAGCCGCCAGCCAGAAGCTCACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 90 bp CATCTGCAGATCTGCTGGCCTTTGGTTTCCTTCATCTCCTCCCAGTaGTCTTGTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATC +
Preference number: 1 (lower is better)
Translates to: HLQICWPLVSFISSQ*SCSSSPLLFWPRAI
Trigger: GATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 90 bp TGTGTTTCTTACCAGGCAGCAGCACTACATGAACTTGCCAGGAGTTaGCACCACTTCGGTCCTTATCTGGGAGGCCCTGTGCCCTCACAA +
Preference number: 1 (lower is better)
Translates to: CVSYQAAALHELARS*HHFGPYLGGPVPSQ
Trigger: TTGTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCCTGGTAAGAAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 90 bp ATGTTCGTCCTGCCCCTGTGTTTCTTACCAGGCAGCAGCACTACATaGACTTGCCAGGAGTTGACACCACTTCGGTCCTTATCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: MFVLPLCFLPGSSTT*TCQELTPLRSLSGR
Trigger: CCTCCCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCCTGGTAAGAAACACAGGGGCAGGACGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 90 bp GCAAAAACAGAGTCCAAAACAACTGTGCATCACACTGGGAGCCAGTaGAGGAGAGGGAACGGAGAGCAGGTGTTCGGCTGCCTGGTGAAT +
Preference number: 1 (lower is better)
Translates to: AKTESKTTVHHTGSQ*RRGNGEQVFGCLVN
Trigger: ATTCACCAGGCAGCCGAACACCTGCTCTCCGTTCCCTCTCCTTCACTGGCTCCCAGTGTGATGCACAGTTGTTTTGGACTCTGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 90 bp AGCGGCTTCATTCCAAGAAAGGCCTCAGATCTCCATGACTGCCTATaGGCTTGTTCTGTAAAGCCTCGAGCTGTTTCACAGGTTCCACAG +
Preference number: 1 (lower is better)
Translates to: SGFIPRKASDLHDCL*ACSVKPRAVSQVPQ
Trigger: CTGTGGAACCTGTGAAACAGCTCGAGGCTTTACAGAACAAGCTCATAGGCAGTCATGGAGATCTGAGGCCTTTCTTGGAATGAAGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTaGAGATCTGCTGGCCTTTGGTTTCCTTCATCTCCTCCCAGTGAT +
Preference number: 1 (lower is better)
Translates to: QMQVSKPRIPAKCAI*RSAGLWFPSSPPSD
Trigger: ATCACTGGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 90 bp TTCTCAGATACAAATCATTGGCCAGGCCTCCCCCTTCACCCAGAGTaGCTATCAGTGTTTTCTTTCCAACACCCATCTACTTGTTCATGC +
Preference number: 1 (lower is better)
Translates to: FSDTNHWPGLPLHPE*LSVFSFQHPSTCSC
Trigger: GCATGAACAAGTAGATGGGTGTTGGAAAGAAAACACTGATAGTCACTCTGGGTGAAGGGGGAGGCCTGGCCAATGATTTGTATCTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 90 bp TCATGTAAACCCAGGCCAGGATCACAGTTTGTGCCAACTTCACTGTaGTATGCCAATCTCATTGTCTTAGCACAGTTTCGTTTCTCCCAT +
Preference number: 1 (lower is better)
Translates to: SCKPRPGSQFVPTSL*YANLIVLAQFRFSH
Trigger: ATGGGAGAAACGAAACTGTGCTAAGACAATGAGATTGGCATAGCACAGTGAAGTTGGCACAAACTGTGATCCTGGCCTGGGTTTACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 90 bp CATCCCAGAATCATGTTTCGTTTAAAACCACAAGTAGCACATGACTaGCTCATGGCACCTGGTTACACTGAACTTGAAGTGGTTTGCTCC +
Preference number: 1 (lower is better)
Translates to: HPRIMFRLKPQVAHD*LMAPGYTELEVVCS
Trigger: GGAGCAAACCACTTCAAGTTCAGTGTAACCAGGTGCCATGAGTCAGTCATGTGCTACTTGTGGTTTTAAACGAAACATGATTCTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 90 bp GAGGGATGCTCTGAAATCTATCCATGTGGTCAAGAAGAGAAAGTGTaGACCATCCCCCTGGTTAGAACTTTTGGATCATTGTTACTAGAA +
Preference number: 1 (lower is better)
Translates to: EGCSEIYPCGQEEKV*TIPLVRTFGSLLLE
Trigger: TTCTAGTAACAATGATCCAAAAGTTCTAACCAGGGGGATGGTGCACACTTTCTCTTCTTGACCACATGGATAGATTTCAGAGCATCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 90 bp AGAAAGGTAAGCAGGGCTCTTTGTTTAGATTGTCACCTCTTTCTCTaGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTA +
Preference number: 1 (lower is better)
Translates to: RKVSRALCLDCHLFL*RLLLPVHSFKKQRV
Trigger: TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAGGTGACAATCTAAACAAAGAGCCCTGCTTACCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 90 bp CCATTTATGAATAAGAGAACTGGAGACAAGGAGAGGCCTTGTTTGTaGTCGATCAAGAGGTACACACAAACCATCAAGGATTTGTACTCC +
Preference number: 1 (lower is better)
Translates to: PFMNKRTGDKERPCL*SIKRYTQTIKDLYS
Trigger: GGAGTACAAATCCTTGATGGTTTGTGTGTACCTCTTGATCGATCACAAACAAGGCCTCTCCTTGTCTCCAGTTCTCTTATTCATAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 90 bp AAGGATTTGTACTCCCTCCAAACTAAGGGGATAAATGCAAAGACTTaGTTCTACCACAGTTGGACTCTATTAAGGCTCAATTTCCTCCAC +
Preference number: 1 (lower is better)
Translates to: KDLYSLQTKGINAKT*FYHSWTLLRLNFLH
Trigger: GTGGAGGAAATTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCAAGTCTTTGCATTTATCCCCTTAGTTTGGAGGGAGTACAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 90 bp CTTTCCAACACCCATCTACTTGTTCATGCAACATATACATTAGCATaGGTTATCTTTTCATTCAGAATTCAGAGCTGCTGTGTGAGCCAG +
Preference number: 1 (lower is better)
Translates to: LSNTHLLVHATYTLA*VIFSFRIQSCCVSQ
Trigger: CTGGCTCACACAGCAGCTCTGAATTCTGAATGAAAAGATAACCCATGCTAATGTATATGTTGCATGAACAAGTAGATGGGTGTTGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 90 bp TTCTCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTaGAAAACTAGAGGAGGAACTATAATAGCATCCAGGTCTGAAAAT +
Preference number: 1 (lower is better)
Translates to: FSLSLEPLDHIRILY*KTRGGTIIASRSEN
Trigger: ATTTTCAGACCTGGATGCTATTATAGTTCCTCCTCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 90 bp CTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATaGAGGTGGAATGCCACATCCAAAGACATTACAAATTCTTCTTAT +
Preference number: 1 (lower is better)
Translates to: LFPLTNMVMILFLIS*RWNATSKDITNSSY
Trigger: ATAAGAAGAATTTGTAATGTCTTTGGATGTGGCATTCCACCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 90 bp CAAATCCACTTTGTAGGGGAGGAAAAGCTATTCCATTTAATACTTTaGCTGTACTCAAAGTTAGGTTGTTCTAAAGAAAGGTCTGCATTC +
Preference number: 1 (lower is better)
Translates to: QIHFVGEEKLFHLIL*LYSKLGCSKERSAF
Trigger: GAATGCAGACCTTTCTTTAGAACAACCTAACTTTGAGTACAGGCAAAGTATTAAATGGAATAGCTTTTCCTCCCCTACAAAGTGGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 90 bp AGGCGGAAGCGGACAGCACAGGCAGCCACATCTCTGGGCTCCAGCTaGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: RRKRTAQAATSLGSS*AKVTFSLKTGLGPL
Trigger: GAGAGGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGATGTGGCTGCCTGTGCTGTCCGCTTCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCACTTCGGTCCTTATCTaGGAGGCCCTGTGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPTSVLI*EALCPH
Trigger: GTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGT...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR CAA 90 bp CTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTTACCA +
Preference number: 2 (lower is better)
Translates to: LGSSLAKVTFSLKTG*GPLCMFVLPLCFLP
Trigger: TGGTAAGAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp AGTTTCTCTCCCATCATTCTCTCTCGGGTCATCTTCCGGGCAGCGTACAGGCGGTCACAATGGTCACTGTaGGCTTCTGGCTGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: SFSPIILSRVIFRAAYRRSQWSL*ASGWRL
Trigger: GAGCCGCCAGCCAGAAGCTCACAGTGACCATTGTGA...CCGCCTGTACGCTGCCCGGAAGATGACCCGAGAGAGAATGATGGGAGAGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR CAA 90 bp CGTCCTGCCCCTGTGTTTCTTACCAGGCAGCAGCACTACATGAACTaGCCAGGAGTTGACACCACTTCGGTCCTTATCTGGGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RPAPVFLTRQQHYMN*PGVDTTSVLIWEAL
Trigger: CAGGGCCTCCCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCCTGGTAAGAAACACAGGGGCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR CAA 90 bp GCAGATCTGCTGGCCTTTGGTTTCCTTCATCTCCTCCCAGTGATCTaGTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCC +
Preference number: 2 (lower is better)
Translates to: ADLLAFGFLHLLPVI*FLLSTAVLAQGNPA
Trigger: GGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAAACCGCAGATGGGCTaGGCGGAGACCCTCCACTGC +
Preference number: 2 (lower is better)
Translates to: LIISTDNRPVVALYESPTKPQMG*AETLHC
Trigger: GCAGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTT...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp ACATCTCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCAGCAGCACTACATaGACTTGCCAGGAGTTGACA +
Preference number: 2 (lower is better)
Translates to: TSLGSSLAKVTFSLKTGLGSSTT*TCQELT
Trigger: TGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCC...CAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR GCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGT +
Preference number: 2 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLIWEAL*PHNGHC
Trigger: ACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGAT...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAGGCAGCCACATCTCTaGGCTCCAGCTTGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LIISTDNRPVVALYESPTRQPHL*APAWQR
Trigger: CCTTTGCCAAGCTGGAGCCCAGAGATGTGGCTGCCT...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTCAGCGACTGCGTGGATaGAGTACTATCACTGTGAGA +
Preference number: 2 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLQRLRG*STITVR
Trigger: TCTCACAGTGATAGTACTTCATCCACGCAGTCGCTG...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTCTGTTTTTGAAACCCTaGAACCCTTGCCAGGACACT +
Preference number: 2 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLLFLKP*NPCQDT
Trigger: AGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAG...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR GCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTTCCATATGTATCAGGTaGTCGGTTAACAGCGAGGTT +
Preference number: 2 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLSICIR*SVNSEV
Trigger: AACCTCGCTGTTAACCGAGCACCTGATACATATGGA...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp TTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAACAGCTTTTCATTTCCCCTTCTaGGTGCAGGTGGCTGAGATA +
Preference number: 2 (lower is better)
Translates to: FPQIIAPLWHCTRAPPTAFHFPF*VQVAEI
Trigger: TATCTCAGCCACCTGCACCCAGAAGGGGAAATGAAA...AGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR CAA 90 bp ATTGGGCTGACCACGCCGAATGGACGTCTTGCAACGGGACATCTCTaGACCCACAGAATTGAGGAGAAAGAGTTTTCCATATGTATCAGG +
Preference number: 2 (lower is better)
Translates to: IGLTTPNGRLATGHL*THRIEEKEFSICIR
Trigger: CCTGATACATATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTGCAAGACGTCCATTCGGCGTGGTCAGCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR GCA 90 bp TCAGGTGCTCGGTTAACAGCGAGGTTTCGGAAATGGCTGCCTTTGATCATTTCCTCTGTATGTTCGTCCTaGCCCTGTGTTTCTTACCAG +
Preference number: 2 (lower is better)
Translates to: SGARLTARFRKWLPLIISSVCSS*PCVSYQ
Trigger: CTGGTAAGAAACACAGGGGCAGGACGAACATACAGA...GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACAACTGTGCATCACACTaGGAGCCAGTGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHNCASH*EPVKER
Trigger: CCTCTCCTTCACTGGCTCCCAGTGTGATGCACAGTT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGAACTTGCCAGGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 2 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSELARS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTGAAGTACTATCACTGTaGGAAACCGCAGATGGGCTG +
Preference number: 2 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSEVLSL*ETADGL
Trigger: CAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTC...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGGCCTCAGATCTCCATaGCTGCCTATGAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMGLRSP*LPMSLF
Trigger: GAACAAGCTCATAGGCAGTCATGGAGATCTGAGGCC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGCTGACCACGCCGAATaGACGTCTTGCAACGGGACA +
Preference number: 2 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKADHAE*TSCNGT
Trigger: TGTCCCGTTGCAAGACGTCCATTCGGCGTGGTCAGC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTAGCTTCCTGAGGAGCTaGGACTATAGGCGCACACCA +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWISFLRS*DYRRTP
Trigger: TGGTGTGCGCCTATAGTCCCAGCTCCTCAGGAAGCT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAACCACAAGTAGCACATaGCTGACTCATGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRTTSST*LTHGTW
Trigger: CCAGGTGCCATGAGTCAGTCATGTGCTACTTGTGGT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGAGCAGGTGTTCGGCTaGCTGGTGAATGGTCCATTT +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTREQVFG*LVNGPF
Trigger: AAATGGACCATTCACCAGGCAGCCGAACACCTGCTC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACTATGTTGCCCAGGCTaGACTAGAAATCCTGGACGC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRLCCPG*TRNPGR
Trigger: GCGTCCAGGATTTCTAGTCCAGCCTGGGCAACATAG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTTCCAAATCAGACCATTaGGAAACCCAAAACTCCCAC +
Preference number: 2 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSSKSDH*ETQNSH
Trigger: GTGGGAGTTTTGGGTTTCTCAATGGTCTGATTTGGA...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCATGAGGCTCAGCATCTaGTTCATATCTATATTTTGG +
Preference number: 2 (lower is better)
Translates to: LIISTDNRPVVALYESPTMRLSI*FISIFW
Trigger: CCAAAATATAGATATGAATCAGATGCTGAGCCTCAT...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCAAGTAGCACATGACTaGCTCATGGCACCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIQVAHD*LMAPGY
Trigger: GTAACCAGGTGCCATGAGTCAGTCATGTGCTACTTG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTACTGCTGGAATGGAATaGTGCATTTCCTCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWITAGME*CISSPR
Trigger: TCTGGGGGAGGAAATGCATCATTCCATTCCAGCAGT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATTCAGAGCTGCTGTGTaGGCCAGATGCTTACATACC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRFRAAV*ARCLHT
Trigger: GGTATGTAAGCATCTGGCTCACACAGCAGCTCTGAA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAATTGCTCAGAAGAGCTaGACATTGAGCGCAGGGATT +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVIAQKS*TLSAGI
Trigger: AATCCCTGCGCTCAATGTGCAGCTCTTCTGAGCAAT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCAGGATCACAGTTTGTaGCAACTTCACTGTGCTATG +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHQDHSL*QLHCAM
Trigger: CATAGCACAGTGAAGTTGGCACAAACTGTGATCCTG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCCAACTGCTTCAATGTaGACTCATAGCACTCCAAAG +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHPTASM*THSTPK
Trigger: CTTTGGAGTGCTATGAGTGCACATTGAAGCAGTTGG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACTGTTTTTGAAACCCTaGAACCCTTGCCAGGACACT +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRLFLKP*NPCQDT
Trigger: AGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAAGAAGAGCTGCACATTaGGCGCAGGGATTAAATGTA +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVRRAAH*AQGLNV
Trigger: TACATTTAATCCCTGCGCTCAATGTGCAGCTCTTCT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAAGATGATGATTCTATaGCACCCCCATCCCCACCAA +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRKMMIL*HPHPHQ
Trigger: TTGGTGGGGATGGGGGTGTCATAGAATCATCATCTT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGTCACTGTGAGCTTCTaGCTGGCGGCTCTATATTCA +
Preference number: 2 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKVTVSF*LAALYS
Trigger: TGAATATAGAGCCGCCAGCCAGAAGCTCACAGTGAC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATTTGGAAACCCACAGTaGTGTCCACACCGAATCATC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRFGNPQ*CPHRII
Trigger: GATGATTCGGTGTGGACACCACTGTGGGTTTCCAAA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATGTGCACCATCCCCCTaGTTAGAACTTTTGGATCAT +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVCAPSP*LELLDH
Trigger: ATGATCCAAAAGTTCTAACCAGGGGGATGGTGCACA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGTCAAAACGTGGAGCTaGGGAGGAGTTATGTGTTTT +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIVKTWS*GGVMCF
Trigger: AAAACACATAACTCCTCCTCAGCTCCACGTTTTGAC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGAGCAGCCATATATATaGAACTCCCATGACCTGAAA +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVEQPYI*NSHDLK
Trigger: TTTCAGGTCATGGGAGTTTCATATATATGGCTGCTC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAGCAGCAGGAAAATATaGGAGGGAAAAATTCAGGGC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRSSRKI*EGKIQG
Trigger: GCCCTGAATTTTTCCCTCTCATATTTTCCTGCTGCT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTTCAGGCAAAATCGCTaGAAGACCTACTCAAGCAAC +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIFRQNR*KTYSSN
Trigger: GTTGCTTGAGTAGGTCTTTCAGCGATTTTGCCTGAA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCACCACCGTAATTGGTaGAATCAGGATTTCTCAATT +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHHHRNW*NQDFSI
Trigger: AATTGAGAAATCCTGATTTCACCAATTACGGTGGTG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCCAGCCTGGCTTCATaGGCCTATCCTTGTTACAGT +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSSLAS*AYPCYS
Trigger: ACTGTAACAAGGATAGGCTCATGAAGCCAGGCTGGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAGTAGAGTTATCCTGTaGCCTAGTCTGGTCTTGTCA +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRSRVIL*PSLVLS
Trigger: TGACAAGACCAGACTAGGGCACAGGATAACTCTACT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACAAAGCCACTTCTTTGTaGTGCTACTTAATCAATCGC +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHKATSL*CYLINR
Trigger: GCGATTGATTAAGTAGCAGCACAAAGAAGTGGCTTT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGAGTCCAAAACAACTGTaGATCACACTGGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: TLFPLTNMVMILFLISCRSPKQL*ITLGAS
Trigger: ACTGGCTCCCAGTGTGATGCACAGTTGTTTTGGACT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGTGTTTCAGGCTCACTaGCACCTAGGACTATGGAGA +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTVFQAH*HLGLWR
Trigger: TCTCCATAGTCCTAGGTGCCAGTGAGCCTGAAACAC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGACACTGAACTTGAAGTaGTTTGCTCCTGAAGACTTC +
Preference number: 2 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMTLNLK*FAPEDF
Trigger: GAAGTCTTCAGGAGCAAACCACTTCAAGTTCAGTGT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACATGAGGCTCAGCATCTaGTTCATATCTATATTTTGG +
Preference number: 2 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHMRLSI*FISIFW
Trigger: CCAAAATATAGATATGAATCAGATGCTGAGCCTCAT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTAGTTTGATTCTTTTATaGGGCTCAGCATCTGATTCA +
Preference number: 2 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSSLILL*GSASDS
Trigger: TGAATCAGATGCTGAGCCTCATAAAAGAATCAAACT...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATTTCCATTTTCCAGTTaGAGAAACCAGGATACAGGC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRFPFSS*RNQDTG
Trigger: GCCTGTATCCTGGTTTCTTCAACTGGAAAATGGAAA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGCTGAGGGTGAATGTTaGTGTATATTCAAGATGTAC +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVAEGEC*CIFKMY
Trigger: GTACATCTTGAATATACAGCAACATTCACCCTCAGC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTGGTTCTACCACAGTTaGACTCTATTAAGGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMWFYHS*TLLRLN
Trigger: ATTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGACAAGATCAGTATTCTaGATGGCACATGCCCAGATT +
Preference number: 2 (lower is better)
Translates to: TLFPLTNMVMILFLISCRTRSVF*MAHAQI
Trigger: AATCTGGGCATGTGCCATTCAGAATACTGATCTTGT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTAAAAATAGGTGACTaGGCAATTGCTCAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLKIGD*AIAQKS
Trigger: GCTCTTCTGAGCAATTGCTCAGTCACCTATTTTTAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTAACTTCACTGTGCTATaGCAATCTCATTGTCTTAGC +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWINFTVL*QSHCLS
Trigger: GCTAAGACAATGAGATTGGCATAGCACAGTGAAGTT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAAAAATGGGTGGGTCTTaGGAACAGAAAATGAAGTAT +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVKMGGS*EQKMKY
Trigger: ATACTTCATTTTCTGTTCCCAAGACCCACCCATTTT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTCACTTGAGAACAAGTaGATGCGCTATTATATCAAC +
Preference number: 2 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMSLENK*MRYYIN
Trigger: GTTGATATAATAGCGCATCCACTTGTTCTCAAGTGA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAAGCATTAGTGAGCAATaGAAAGCAGTTAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVSISEQ*KAVSKL
Trigger: TAACTTGCTAACTGCTTTCCATTGCTCACTAATGCT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 90 bp AGCCTCCTTTATTTACGAATCCAGCCTGGCTTCATGAGCCTATCCTaGTTACAGTATCTGAACGTTGGTTTTTGTTTTTCTCTAGTGTTA +
Preference number: 2 (lower is better)
Translates to: SLLYLRIQPGFMSLS*LQYLNVGFCFSLVL
Trigger: TAACACTAGAGAAAAACAAAAACCAACGTTCAGATACTGTAACAAGGATAGGCTCATGAAGCCAGGCTGGATTCGTAAATAAAGGAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 90 bp GTACAATTAACTATGACGGGGCACAATCACAAAGCTTCCTTTCTCTaGGCAGGAGTGGTAAATGTAAAGTCATATAAACTAGCGACAGAA +
Preference number: 2 (lower is better)
Translates to: VQLTMTGHNHKASFL*AGVVNVKSYKLATE
Trigger: TTCTGTCGCTAGTTTATATGACTTTACATTTACCACTCCTGCCAAGAGAAAGGAAGCTTTGTGATTGTGCCCCGTCATAGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTCATTCCACACAAGCTaGAAATATTTCTCCATTCAC +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWISFHTS*KYFSIH
Trigger: GTGAATGGAGAAATATTTTCAGCTTGTGTGGAATGA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGAAACTAAAAATAGGTaGCTGAGCAATTGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRETKNR*LSNCSE
Trigger: TTCTGAGCAATTGCTCAGTCACCTATTTTTAGTTTC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTATGAAATCTACACATTaGAAAGGCAGAAGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIMKSTH*KGRSCV
Trigger: AACACAGCTTCTGCCTTTTCAATGTGTAGATTTCAT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTACTAAAGCACAGTAACTaGACAAGAGGTAACAATAAT +
Preference number: 2 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVLKHSN*TRGNNN
Trigger: ATTATTGTTACCTCTTGTGCAGTTACTGTGCTTTAG...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGAGGACTCAAAACAGTaGTTTGGCAATTTGATTATA +
Preference number: 2 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMEDSKQ*FGNLII
Trigger: TATAATCAAATTGCCAAAGCACTGTTTTGAGTCCTC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGGATCAGTATTCTGAATaGCACATGCCCAGATTGCAA +
Preference number: 2 (lower is better)
Translates to: QCCFNVKSPYEILIISWKDQYSE*HMPRLQ
Trigger: TTGCAATCTGGGCATGTGCCATTCAGAATACTGATC...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTATAAATGCAAAGACTTaGTTCTACCACAGTTGGACT +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIINAKT*FYHSWT
Trigger: AGTCCAACTGTGGTAGAACCAAGTCTTTGCATTTAT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTACCCAGCGAATGTTTaGTATTTTGTAGAGACAAGA +
Preference number: 2 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIYPANV*YFVETR
Trigger: TCTTGTCTCTACAAAATACCAAACATTCGCTGGGTA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACACGTCATTGTGCATTaGTCAAAACCCATAAAATAC +
Preference number: 2 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRHVIVH*SKPIKY
Trigger: GTATTTTATGGGTTTTGACCAATGCACAATGACGTG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 90 bp ATTTCTAGCTCCTCAGAGACAGAACAGCTAAAGACCAACTATAACTaGTATTCAGACAGATTACTGACATTCTATGAATATGGCCCACTG +
Preference number: 2 (lower is better)
Translates to: ISSSSETEQLKTNYN*YSDRLLTFYEYGPL
Trigger: CAGTGGGCCATATTCATAGAATGTCAGTAATCTGTCTGAATACAAGTTATAGTTGGTCTTTAGCTGTTCTGTCTCTGAGGAGCTAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTTGGGAACAGAAAATaGAGTATAGGTGATTATTGG +
Preference number: 2 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLGNRK*SIGDYW
Trigger: CCAATAATCACCTATACTTCATTTTCTGTTCCCAAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAAACAAAAACCAGTGCTaGTTCAATGTCAAATCTCCC +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTNKNQC*FNVKSP
Trigger: GGGAGATTTGACATTGAAGCAGCACTGGTTTTTGTT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATTGAGAACAAGTGGATaGGCTATTATATCAACAAGC +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLRTSG*AIISTS
Trigger: GCTTGTTGATATAATAGCGCATCCACTTGTTCTCAA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACTTGATTTAGAGGGATaGTCTGAAATCTATCCATGT +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLDLEG*SEIYPC
Trigger: ACATGGATAGATTTCAGAGCATCCCTCTAAATCAAG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCAATTAAATCAAATTaGTGGCTATCAGAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSIKSN*WLSEKH
Trigger: GTGCTTCTCTGATAGCCACCAATTTGATTTAATTGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 90 bp AAGATTCTTCTAAATTCTCCAGAAACTCTCCTTTTTACTCAAGGTTaGAATCACTTGAGAACAAGTGGATGCGCTATTATATCAACAAGC +
Preference number: 2 (lower is better)
Translates to: KILLNSPETLLFTQG*NHLRTSGCAIISTS
Trigger: GCTTGTTGATATAATAGCGCATCCACTTGTTCTCAAGTGATTCAAACCTTGAGTAAAAAGGAGAGTTTCTGGAGAATTTAGAAGAATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp GTTGACACCACTTCGGTCCTTATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGTGAGCTTCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: VDTTSVLIWEAL*PHNGHCELLAG
Trigger: GCCAGCCAGAAGCTCACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGTGGTGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CAA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTTCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTC +
Preference number: 3 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLSLKTG*GPLCMF
Trigger: GAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 72 bp CTCTGGCGCCCCTCCATGAGACAGCGACTGCGTGGATaGAGTACTATCACTGTGAGAAACCGCAGATGGGCT +
Preference number: 3 (lower is better)
Translates to: LWRPSMRQRLRG*STITVRNRRWA
Trigger: AGCCCATCTGCGGTTTCTCACAGTGATAGTACTTCATCCACGCAGTCGCTGTCTCATGGAGGGGCGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 72 bp GAGTCCAAAACAACTGTGCATCACACTGGGAGCCAGTaGAGGAGAGGGAACGGAGAGCAGGTGTTCGGCTGC +
Preference number: 3 (lower is better)
Translates to: ESKTTVHHTGSQ*RRGNGEQVFGC
Trigger: GCAGCCGAACACCTGCTCTCCGTTCCCTCTCCTTCACTGGCTCCCAGTGTGATGCACAGTTGTTTTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp TTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAACAGCTTCTCTGGGCTCCAGCTaGGCAAAGGTGACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: FPQIIAPLWHCTRAPPTASLGSS*AKVTFS
Trigger: GGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGA...AGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 72 bp ATCTGCTGGCCTTTGGTTTCCTTCATCTCCTCCCAGTaGTCTTGTTCCTCCTCTCCACTGCTGTTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: ICWPLVSFISSQ*SCSSSPLLFWP
Trigger: GGGCCAGAACAGCAGTGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAAGGAAACCAAAGGCCAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR-3UTR CAA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCCAGCACTACATGAACTaGCCAGGAGTTGACACCACT +
Preference number: 3 (lower is better)
Translates to: LIISTDNRPVVALYESPTQHYMN*PGVDTT
Trigger: AGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTG...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 72 bp ACAAATCATTGGCCAGGCCTCCCCCTTCACCCAGAGTaGCTATCAGTGTTTTCTTTCCAACACCCATCTACT +
Preference number: 3 (lower is better)
Translates to: TNHWPGLPLHPE*LSVFSFQHPST
Trigger: AGTAGATGGGTGTTGGAAAGAAAACACTGATAGTCACTCTGGGTGAAGGGGGAGGCCTGGCCAATGATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp GTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTaGAGATCTGCTGGCCTTTGGTTTCCTTCATCTCCT +
Preference number: 3 (lower is better)
Translates to: VSKPRIPAKCAI*RSAGLWFPSSP
Trigger: AGGAGATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR GCA 72 bp CCCAGGCCAGGATCACAGTTTGTGCCAACTTCACTGTaGTATGCCAATCTCATTGTCTTAGCACAGTTTCGT +
Preference number: 3 (lower is better)
Translates to: PRPGSQFVPTSL*YANLIVLAQFR
Trigger: ACGAAACTGTGCTAAGACAATGAGATTGGCATAGCACAGTGAAGTTGGCACAAACTGTGATCCTGGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCAGAAGAGCTGCACATaGAGCGCAGGGATTAAATGT +
Preference number: 3 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHQKSCT*SAGIKC
Trigger: ACATTTAATCCCTGCGCTCAATGTGCAGCTCTTCTG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 72 bp ATGAAGTACTATCACTGTGAGAAACCGCAGATGGGCTaGGCGGAGACCCTCCACTGCTTATATTACTTCTTG +
Preference number: 3 (lower is better)
Translates to: MKYYHCEKPQMG*AETLHCLYYFL
Trigger: CAAGAAGTAATATAAGCAGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR TCA 72 bp ATTCCAAGAAAGGCCTCAGATCTCCATGACTGCCTATaGGCTTGTTCTGTAAAGCCTCGAGCTGTTTCACAG +
Preference number: 3 (lower is better)
Translates to: IPRKASDLHDCL*ACSVKPRAVSQ
Trigger: CTGTGAAACAGCTCGAGGCTTTACAGAACAAGCTCATAGGCAGTCATGGAGATCTGAGGCCTTTCTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp CAAGACTCACTGCCAGTCCAAGGCTTCCTAGACACTTaGCCCAATAAATTCAGCCAATGTTTCACCTTCCAA +
Preference number: 3 (lower is better)
Translates to: QDSLPVQGFLDT*PNKFSQCFTFQ
Trigger: TTGGAAGGTGAAACATTGGCTGAATTTATTGGGGCAAGTGTCTAGGAAGCCTTGGACTGGCAGTGAGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp AGGTCTGAAAATGCCTATGAAACACTGGGAGAGGATTaGGGTGGCTTCCACCTTACAACTAACAAAACTGGC +
Preference number: 3 (lower is better)
Translates to: RSENAYETLGED*GGFHLTTNKTG
Trigger: GCCAGTTTTGTTAGTTGTAAGGTGGAAGCCACCCCAATCCTCTCCCAGTGTTTCATAGGCATTTTCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 72 bp ACTCACAATGTCCTAGGGGTTAGTGGAATCTGTTTTTaGAACCCTGAAACCCTTGCCAGGACACTTAGTGTC +
Preference number: 3 (lower is better)
Translates to: THNVLGVSGICF*NPETLARTLSV
Trigger: GACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAACCCCTAGGACATTGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
3UTR GCA 72 bp GCCAGGATCACAGTTTGTGCCAACTTCACTGTGCTATaGCAATCTCATTGTCTTAGCACAGTTTCGTTTCTC +
Preference number: 3 (lower is better)
Translates to: ARITVCANFTVL*QSHCLSTVSFL
Trigger: GAGAAACGAAACTGTGCTAAGACAATGAGATTGGCATAGCACAGTGAAGTTGGCACAAACTGTGATCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp GAGTTTCATGTAAACCCAGGCCAGGATCACAGTTTGTaGCAACTTCACTGTGCTATGCCAATCTCATTGTCT +
Preference number: 3 (lower is better)
Translates to: EFHVNPGQDHSL*QLHCAMPISLS
Trigger: AGACAATGAGATTGGCATAGCACAGTGAAGTTGGCACAAACTGTGATCCTGGCCTGGGTTTACATGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp ACCTTCATCTCTGCAATAATGCCAGGTTCTGCAAGTTaGTGTAGCTACAAAGCAAAGGGCAGTCAGAAGACA +
Preference number: 3 (lower is better)
Translates to: TFISAIMPGSAS*CSYKAKGSQKT
Trigger: TGTCTTCTGACTGCCCTTTGCTTTGTAGCTACAGCAACTTGCAGAACCTGGCATTATTGCAGAGATGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTAGTGGACACACGTCATaGTGCATTGGTCAAAACCCA +
Preference number: 3 (lower is better)
Translates to: KKGLHSTQRLANLLKTWISGHTS*CIGQNP
Trigger: TGGGTTTTGACCAATGCACAATGACGTGTGTCCACT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp GTCCTGATGAAGCCTCCTTTATTTACGAATCCAGCCTaGCTTCATGAGCCTATCCTTGTTACAGTATCTGAA +
Preference number: 3 (lower is better)
Translates to: VLMKPPLFTNPA*LHEPILVTVSE
Trigger: TTCAGATACTGTAACAAGGATAGGCTCATGAAGCCAGGCTGGATTCGTAAATAAAGGAGGCTTCATCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 72 bp AATAAGAGAACTGGAGACAAGGAGAGGCCTTGTTTGTaGTCGATCAAGAGGTACACACAAACCATCAAGGAT +
Preference number: 3 (lower is better)
Translates to: NKRTGDKERPCL*SIKRYTQTIKD
Trigger: ATCCTTGATGGTTTGTGTGTACCTCTTGATCGATCACAAACAAGGCCTCTCCTTGTCTCCAGTTCTCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp TCTGAAATCTATCCATGTGGTCAAGAAGAGAAAGTGTaGACCATCCCCCTGGTTAGAACTTTTGGATCATTG +
Preference number: 3 (lower is better)
Translates to: SEIYPCGQEEKV*TIPLVRTFGSL
Trigger: CAATGATCCAAAAGTTCTAACCAGGGGGATGGTGCACACTTTCTCTTCTTGACCACATGGATAGATTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp TCTCTTGAACCTCTGGACCACATACGAATTCTCTACTaGAAAACTAGAGGAGGAACTATAATAGCATCCAGG +
Preference number: 3 (lower is better)
Translates to: SLEPLDHIRILY*KTRGGTIIASR
Trigger: CCTGGATGCTATTATAGTTCCTCCTCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCA +
Preference number: 3 (lower is better)
Translates to: PYPELKLNDLLAQINSSVETLKP*PGHLVS
Trigger: TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
3UTR-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTTCTGTAAGAACTTATaGGGTGAGAAAGACAGCATA +
Preference number: 3 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHFCKNL*GEKDSI
Trigger: TATGCTGTCTTTCTCACCCAATAAGTTCTTACAGAA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGTACATGCATCCTATTaGGTGAGTAGCACCAACATA +
Preference number: 3 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIVHASY*VSSTNI
Trigger: TATGTTGGTGCTACTCACCAAATAGGATGCATGTAC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATTCATGAGCCTATCCTaGTTACAGTATCTGAACGTT +
Preference number: 3 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVFMSLS*LQYLNV
Trigger: AACGTTCAGATACTGTAACAAGGATAGGCTCATGAA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCAAACCATCAAGGATTaGTACTCCCTCCAAACTAAG +
Preference number: 3 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIQTIKD*YSLQTK
Trigger: CTTAGTTTGGAGGGAGTACAAATCCTTGATGGTTTG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAAAGCTTCCTTTCTCTaGGCAGGAGTGGTAAATGTA +
Preference number: 3 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRKASFL*AGVVNV
Trigger: TACATTTACCACTCCTGCCAAGAGAAAGGAAGCTTT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 72 bp AAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTaGAAACATGGATTTGCAGTTTGTTACATGATCAGT +
Preference number: 3 (lower is better)
Translates to: KVCIQLKGWRTC*KHGFAVCYMIS
Trigger: ACTGATCATGTAACAAACTGCAAATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp AAGGGGATAAATGCAAAGACTTGGTTCTACCACAGTTaGACTCTATTAAGGCTCAATTTCCTCCACATACCA +
Preference number: 3 (lower is better)
Translates to: KGINAKTWFYHS*TLLRLNFLHIP
Trigger: TGGTATGTGGAGGAAATTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCAAGTCTTTGCATTTATCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp TACTCCCTCCAAACTAAGGGGATAAATGCAAAGACTTaGTTCTACCACAGTTGGACTCTATTAAGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: YSLQTKGINAKT*FYHSWTLLRLN
Trigger: ATTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCAAGTCTTTGCATTTATCCCCTTAGTTTGGAGGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCA +
Preference number: 3 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCETLKP*PGHLVS
Trigger: TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
3UTR-3UTR CAA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGTGGCACATGCCCAGATaGCAAGTAGTGACTAATATA +
Preference number: 3 (lower is better)
Translates to: TLFPLTNMVMILFLISCRWHMPR*QVVTNI
Trigger: TATATTAGTCACTACTTGCAATCTGGGCATGTGCCA...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGTAGTCAAACTGCCATaGTCACCAACTCTTTTGATA +
Preference number: 3 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRVVKLP*SPTLLI
Trigger: TATCAAAAGAGTTGGTGACAATGGCAGTTTGACTAC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACTGGTTACACTGAACTaGAAGTGGTTTGCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLVTLN*KWFAPE
Trigger: TTCAGGAGCAAACCACTTCAAGTTCAGTGTAACCAG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTACAGAGTCACTAAATTaGGGATCACGTCTTCATAAC +
Preference number: 3 (lower is better)
Translates to: KKGLHSTQRLANLLKTWITESLN*GSRLHN
Trigger: GTTATGAAGACGTGATCCCAAATTTAGTGACTCTGT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACAGGTATTTAACTCATaGCTCAACAAAAGACACTAC +
Preference number: 3 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRQVFNS*LNKRHY
Trigger: GTAGTGTCTTTTGTTGAGCAATGAGTTAAATACCTG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp CCCATGCTCATAACCATACAAGATCAGTATTCTGAATaGCACATGCCCAGATTGCAAGTAGTGACTAATATA +
Preference number: 3 (lower is better)
Translates to: PMLITIQDQYSE*HMPRLQVVTNI
Trigger: TATATTAGTCACTACTTGCAATCTGGGCATGTGCCATTCAGAATACTGATCTTGTATGGTTATGAGCATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp CATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATaGATTTGCAGTTTGTTACATGATCAGTGTTTGAAC +
Preference number: 3 (lower is better)
Translates to: HSTQRLANLLKT*ICSLLHDQCLN
Trigger: GTTCAAACACTGATCATGTAACAAACTGCAAATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp CTCACAAACATGGTGATGATTCTTTTCCTGATTTCATaGAGGTGGAATGCCACATCCAAAGACATTACAAAT +
Preference number: 3 (lower is better)
Translates to: LTNMVMILFLIS*RWNATSKDITN
Trigger: ATTTGTAATGTCTTTGGATGTGGCATTCCACCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp AATGAAGGTTCATCAGTTGTAACAAATATAGCACTGTaGTGTTCAAAATGTTCACGGGGAAGAAGGTTGTGT +
Preference number: 3 (lower is better)
Translates to: NEGSSVVTNIAL*CSKCSRGRRLC
Trigger: ACACAACCTTCTTCCCCGTGAACATTTTGAACACCACAGTGCTATATTTGTTACAACTGATGAACCTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp GCACTTAAATGTATACAATCAGCTGAGGGTGAATGTTaGTGTATATTCAAGATGTACATGCATCCTATTTGG +
Preference number: 3 (lower is better)
Translates to: ALKCIQSAEGEC*CIFKMYMHPIW
Trigger: CCAAATAGGATGCATGTACATCTTGAATATACAGCAACATTCACCCTCAGCTGATTGTATACATTTAAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp CCTTTTTACTCAAGGTTTGAATCACTTGAGAACAAGTaGATGCGCTATTATATCAACAAGCCACTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: PFYSRFESLENK*MRYYINKPLLK
Trigger: TTTTAAGAGTGGCTTGTTGATATAATAGCGCATCCACTTGTTCTCAAGTGATTCAAACCTTGAGTAAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR TCA 72 bp ATGAACTATGCACTTTGGGTGATAATGTTATGTCAATaGAGGTTCATCAGTTGTAACAAATATAGCACTGTG +
Preference number: 3 (lower is better)
Translates to: MNYALWVIMLCQ*RFISCNKYSTV
Trigger: CACAGTGCTATATTTGTTACAACTGATGAACCTTCATTGACATAACATTATCACCCAAAGTGCATAGTTCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR GCA 72 bp TCAGTGTTTTCTTTCCAACACCCATCTACTTGTTCATaGAACATATACATTAGCATGGGTTATCTTTTCATT +
Preference number: 3 (lower is better)
Translates to: SVFSFQHPSTCS*NIYISMGYLFI
Trigger: AATGAAAAGATAACCCATGCTAATGTATATGTTGCATGAACAAGTAGATGGGTGTTGGAAAGAAAACACTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp TGGTTTATTAGTTTACTCTCCTTACATACAACTCACTaGAGGATGCTAAATGTATCCAGCACATTTATGTAT +
Preference number: 3 (lower is better)
Translates to: WFISLLSLHTTH*RMLNVSSTFMY
Trigger: ATACATAAATGTGCTGGATACATTTAGCATCCTCCAGTGAGTTGTATGTAAGGAGAGTAAACTAATAAACCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CCA 72 bp ATAAATAAGGTGATTATTGTCTGTGTGTCTAGGATATaGTTTTGTGACCCAAGGGAAACAAAAACAGTCAAA +
Preference number: 3 (lower is better)
Translates to: INKVIIVCVSRI*FCDPRETKTVK
Trigger: TTTGACTGTTTTTGTTTCCCTTGGGTCACAAAACCATATCCTAGACACACAGACAATAATCACCTTATTTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCCTGCCCTCTGTGGATTaGCGCCTGAGGCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPLPSVD*RLRLWT
Trigger: GGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAG...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTCTGGCGCCCCTCCATaGGACAGCGACTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFSGAPP*DSDCVD
Trigger: ATCCACGCAGTCGCTGTCTCATGGAGGGGCGCCAGA...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCTCTCCATCTCCAAGCTaGCCTCTGTGGATTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPSPSPS*PLWIGA
Trigger: GGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGA...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCTTCACATGGGGACTGTaGGTGAGCAGGGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPFTWGL*VSRDVV
Trigger: GACCACATCCCTGCTCACTCACAGTCCCCATGTGAA...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCACCCCGGATGGCACCTaGAAATTGGTCCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPTPDGT*KLVLSC
Trigger: ACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGT...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp ACATCTCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGCCCCACCAACAGCTCTaGCGCCCCTCCATGAGACAG +
Preference number: 4 (lower is better)
Translates to: TSLGSSLAKVTFSLKTGLPHQQL*RPSMRQ
Trigger: CTGTCTCATGGAGGGGCGCCAGAGCTGTTGGTGGGG...CAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp ACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTTACCAGGCAGGCAGCCACATCTCTaGGCTCCAGCTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TGLGPLCMFVLPLCFLPGRQPHL*APAWQR
Trigger: CCTTTGCCAAGCTGGAGCCCAGAGATGTGGCTGCCT...GCCTGGTAAGAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTCTGTGGATTGGCGCCTaGGGCTTTGGACCACACTGG +
Preference number: 4 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLLWIGA*GFGPHW
Trigger: CCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAG...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
3UTR CAA 72 bp AGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLAKVTFSLKTG*GPLCMFVLPLC
Trigger: ACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCGTGACATCAGACAGCTaGAAGAGGGCCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFVTSDS*KRATWK
Trigger: TTTCCAGGTGGCCCTCTTTCAGCTGTCTGATGTCAC...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCACACTGGACTCTTGGTaGGATGTGCCGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFTLDSW*DVPWCL
Trigger: CAAACACCACGGCACATCTCACCAAGAGTCCAGTGT...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCGCGGAGACCCTCCACTaGTTATATTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPAETLH*LYYFLA
Trigger: AGCCAAGAAGTAATATAAGCAGTGGAGGGTCTCCGC...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCAGATCTGCTGGCCTTTaGTTTCCTTCATCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFRSAGL*FPSSPP
Trigger: GGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCT...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCATGTGCCGTGGTGTTTaGCATCCCCTCTTTCACATG +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFMCRGV*HPLFHM
Trigger: CATGTGAAAGAGGGGATGCCAAACACCACGGCACAT...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAATCTGGCGCCCCTCCATaGGACAGCGACTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQSGAPP*DSDCVD
Trigger: ATCCACGCAGTCGCTGTCTCATGGAGGGGCGCCAGA...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp ACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTTACCAGGCGCGAGGTTTCGGAAATaGCTGCCTTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: TGLGPLCMFVLPLCFLPGARFRK*LPLIIS
Trigger: GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGC...GCCTGGTAAGAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCTCTCCACTGCTGTTCTaGCCCAGGGCAATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTSPLLF*PRAIQP
Trigger: TGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGA...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTGCCCAATTGGGCCACTaGGACATTGTGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLAQLGH*DIVEHE
Trigger: CTCATGTTCCACAATGTCCCAGTGGCCCAATTGGGC...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCACTTGCGGTCATCACTaGCCCAATTGGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTTCGHH*PNWATG
Trigger: CCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGT...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTGAACTTGCCAGGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLELARS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTC...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTAAACCGCAGATGGGCTaGGCGGAGACCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSKPQMG*AETLHC
Trigger: GCAGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTT...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGGGCCCAAATCTCAAATTGTTTaGTCACCTCCTCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SGLQLGKGDLLPEDGVGPKSQIV*SPPRHC
Trigger: ACAGTGACGAGGAGGTGATCAAACAATTTGAGATTT...GGGCCCAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAACAGCTATAATCGCCCCGTTGTaGCATTGTACGAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FPQIIAPLWHCTRAPPTAIIAPL*HCTRAP
Trigger: TGGGGCTCTCGTACAATGCCACAACGGGGCGATTAT...AGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TCCCTGAAGACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCCGAACGGCTGAATTTTaGTTTCTGCTCCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: SLKTGLGPLCMFVLPLCFRTAEF*FLLQSC
Trigger: ACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCG...GAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACTGCCCTCTGTGGATTaGCGCCTGAGGCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQLPSVD*RLRLWT
Trigger: GGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCCCTCTGGACTCCACATaGAGGAGCTGTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTPLDST*RSCQWH
Trigger: ATGCCACTGACAGCTCCTCCATGTGGAGTCCAGAGG...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTTCTGTATGTTCGTCCTaGCCCTGTGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLSVCSS*PCVSYQ
Trigger: CTGGTAAGAAACACAGGGGCAGGACGAACATACAGA...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp AGTTTCTCTCCCATCATTCTCTCTCGGGTCATCTTCCGGGCAGCGTACAGGCGGTCCATATGTATCAGGTaGTCGGTTAACAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: SFSPIILSRVIFRAAYRRSICIR*SVNSEV
Trigger: AACCTCGCTGTTAACCGAGCACCTGATACATATGGA...CCGCCTGTACGCTGCCCGGAAGATGACCCGAGAGAGAATGATGGGAGAGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAGGCAGCCACATCTCTaGGCTCCAGCTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQRQPHL*APAWQR
Trigger: CCTTTGCCAAGCTGGAGCCCAGAGATGTGGCTGCCT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGCTGACCACGCCGAATaGACGTCTTGCAACGGGACA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQADHAE*TSCNGT
Trigger: TGTCCCGTTGCAAGACGTCCATTCGGCGTGGTCAGC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTTCACAATGGTCACTGTaGGCTTCTGGCTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSSQWSL*ASGWRL
Trigger: GAGCCGCCAGCCAGAAGCTCACAGTGACCATTGTGA...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAAACCGCAGATGGGCTaGGCGGAGACCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSKPQMG*AETLHC
Trigger: GCAGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQIWEAL*PHNGHC
Trigger: ACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGAT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACACTTCGGTCCTTATCTaGGAGGCCCTGTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHTSVLI*EALCPH
Trigger: GTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTTTCTCTCCCATCATTCTCTCTCGGGTCATCTTCCGGGCAGCGTACAGGCGGGCTTATATTACTTCTTaGCTCCAGAACCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SFSPIILSRVIFRAAYRRAYITS*LQNQSH
Trigger: GTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGC...CCGCCTGTACGCTGCCCGGAAGATGACCCGAGAGAGAATGATGGGAGAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCCCCACCAACAGCTCTaGCGCCCCTCCATGAGACAG +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIPHQQL*RPSMRQ
Trigger: CTGTCTCATGGAGGGGCGCCAGAGCTGTTGGTGGGG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGGCAGCAGCACTACATaGACTTGCCAGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQGSSTT*TCQELT
Trigger: TGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp GTTCCTCCTCTCCACTGCTGTTCTGGCCCAGGGCAATCCAGCCAATCATCTCTTCTTGACCCACAGAATTaGGGAGAAAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VPPLHCCSGPGQSSQSSLLDPQN*GERVFH
Trigger: ATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAG...AAGAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGAGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGTGACATCAGACAGCTaGAAGAGGGCCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQVTSDS*KRATWK
Trigger: TTTCCAGGTGGCCCTCTTTCAGCTGTCTGATGTCAC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTGAATGCAGTGGCATaGTCCCGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLNAVA*SRLTAA
Trigger: GGCTGCAGTGAGCCGGGATCATGCCACTGCATTCAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGCCGAATGGACGTCTTaGAACGGGACATCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQAEWTS*NGTSLD
Trigger: GTCAAGAGATGTCCCGTTGCAAGACGTCCATTCGGC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp ACATCTCTGGGCTCCAGCTTGGCAAAGGTGACCTTCTCCCTGAAGACGGGGTTGCTGAATTTTGGTTTCTaGTCCAATCCTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TSLGSSLAKVTFSLKTGLLNFGF*SNPVCF
Trigger: AAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAG...CAACCCCGTCTTCAGGGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCTTTCATTTCCCCTTCTaGGTGCAGGTGGCTGAGATA +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTFHFPF*VQVAEI
Trigger: TATCTCAGCCACCTGCACCCAGAAGGGGAAATGAAA...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGTGAGAAACCGCAGATaGGCTGAGCGGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSVRNRR*AERRPS
Trigger: GGAGGGTCTCCGCTCAGCCCATCTGCGGTTTCTCAC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACCTTATAGACAGGATTaGGCTGACCACGCCGAATGG +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQPYRQD*ADHAEW
Trigger: CCATTCGGCGTGGTCAGCCCAATCCTGTCTATAAGG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTCTCCACTGCTGTTCTaGCCCAGGGCAATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMSPLLF*PRAIQP
Trigger: TGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCGCCACTGGGACATTGTaGAACATGAGTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTATGTL*NMSPLH
Trigger: ATGCAAAGGACTCATGTTCCACAATGTCCCAGTGGC...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTCATCACTGGCCCAATTaGGCCACTGGGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSHHWPN*ATGTLW
Trigger: CCACAATGTCCCAGTGGCCCAATTGGGCCAGTGATG...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACTGGGTGCAGGTGGCTaGGATAGAATAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQLGAGG*DRIVSL
Trigger: GAGAGAAACTATTCTATCTCAGCCACCTGCACCCAG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACAGCGACTGCGTGGATaGAGTACTATCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQQRLRG*STITVR
Trigger: TCTCACAGTGATAGTACTTCATCCACGCAGTCGCTG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCTGGCGCCCCTCCATaGGACAGCGACTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSGAPP*DSDCVD
Trigger: ATCCACGCAGTCGCTGTCTCATGGAGGGGCGCCAGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACAACGGGACATCTCTTaGCCCACAGAATTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQQRDIS*PTELRR
Trigger: TCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCCGGAAATCATCAACGTaGCATCAGACAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTRKSST*HQTAER
Trigger: TCTTTCAGCTGTCTGATGTCACGTTGATGATTTCCG...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCAGGTGCTCGGTTAACAGCGAGGTTTCGGAAATGGCTGCCTTTGATCATTTCCCTGTTTTTGAAACCCTaGAACCCTTGCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: SGARLTARFRKWLPLIISLFLKP*NPCQDT
Trigger: AGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAG...GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAATCCAGCCTGGCTTCATaGGCCTATCCTTGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQSSLAS*AYPCYS
Trigger: ACTGTAACAAGGATAGGCTCATGAAGCCAGGCTGGA...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACACCACAAGTAGCACATaGCTGACTCATGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHTTSST*LTHGTW
Trigger: CCAGGTGCCATGAGTCAGTCATGTGCTACTTGTGGT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGCCGAATGGACGTCTTaGAACGGGACATCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSAEWTS*NGTSLD
Trigger: GTCAAGAGATGTCCCGTTGCAAGACGTCCATTCGGC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGCTACCCAGGCTGAATaGAGTGGCATGATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIATQAE*SGMIPA
Trigger: AGCCGGGATCATGCCACTGCATTCAGCCTGGGTAGC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCCTTATAGACAGGATTaGGCTGACCACGCCGAATGG +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHPYRQD*ADHAEW
Trigger: CCATTCGGCGTGGTCAGCCCAATCCTGTCTATAAGG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAGATCTGCTGGCCTTTaGTTTCCTTCATCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQRSAGL*FPSSPP
Trigger: GGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCCTTGGGCTTGAATTTTaGGCAGAGTCCTGCAAATCA +
Preference number: 4 (lower is better)
Translates to: LIISTDNRPVVALYESPTLGLEF*AESCKS
Trigger: TGATTTGCAGGACTCTGCCCAAAATTCAAGCCCAAG...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTACTTGCGGTCATCACTaGCCCAATTGGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWITCGHH*PNWATG
Trigger: CCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGGCTTTGGACCACACTaGACTCTTGGTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSGFGPH*TLGEMC
Trigger: GCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAATGGCACCTGCAAATTaGTCCTGTCCTGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQMAPAN*SCPVPL
Trigger: CAGAGGAACAGGACAGGACCAATTTGCAGGTGCCAT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp ACCACGCCGAATGGACGTCTTGCAACGGGACATCTCTaGACCCACAGAATTGAGGAGAAAGAGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: TTPNGRLATGHL*THRIEEKEFSI
Trigger: TATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTGCAAGACGTCCATTCGGCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCTGGGTGCAGGTGGCTaGGATAGAATAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHLGAGG*DRIVSL
Trigger: GAGAGAAACTATTCTATCTCAGCCACCTGCACCCAG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCTCAGATGTCACTaGACGGAAACTCTGGGACCG +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSFLRCH*TETLGP
Trigger: CGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAA...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATTCACATGGGGACTGTaGGTGAGCAGGGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSFTWGL*VSRDVV
Trigger: GACCACATCCCTGCTCACTCACAGTCCCCATGTGAA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACTGTGGATTGGCGCCTaGGGCTTTGGACCACACTGG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLWIGA*GFGPHW
Trigger: CCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACCCCTTCACCCAGAGTaGCTATCAGTGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQPLHPE*LSVFSF
Trigger: GAAAGAAAACACTGATAGTCACTCTGGGTGAAGGGG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAACCCCGGATGGCACCTaGAAATTGGTCCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSTPDGT*KLVLSC
Trigger: ACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGCGGAGACCCTCCACTaGTTATATTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQAETLH*LYYFLA
Trigger: AGCCAAGAAGTAATATAAGCAGTGGAGGGTCTCCGC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAGGCAGATACTTCTGTaGCATCTTCTCCGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQRQILL*HLLRVS
Trigger: TGACACACGGAGAAGATGGCACAGAAGTATCTGCCT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAACTCTTGGTGAGATGTaGCGTGGTGTTTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVTLGEM*RGVWHP
Trigger: GGGATGCCAAACACCACGGCACATCTCACCAAGAGT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAATGGCACCTGCAAATTaGTCCTGTCCTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQMAPAN*SCPVPS
Trigger: AGAAGGAACAGGACAGGACCAATTTGCAGGTGCCAT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430451.3
ENST00000555409.1
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACACCACACTTTGAGATaGGCTCTGAGACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSHHTLR*ALRPRM
Trigger: CATCCGGGGTCTCAGAGCCCATCTCAAAGTGTGGTG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTCACCACACTTTGAGATaGGCTCTGAGACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGHHTLR*ALRPRM
Trigger: CATCCGGGGTCTCAGAGCCCATCTCAAAGTGTGGTG...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGTCACTGTGAGCTTCTaGCTGGCGGCTCTATATTCA +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSVTVSF*LAALYS
Trigger: TGAATATAGAGCCGCCAGCCAGAAGCTCACAGTGAC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGTGAGAAACCGCAGATaGGCTGAGCGGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTVRNRR*AERRPS
Trigger: GGAGGGTCTCCGCTCAGCCCATCTGCGGTTTCTCAC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCCCCACCAACAGCTCTaGCGCCCCTCCATGAGACAG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVPHQQL*RPSMRQ
Trigger: CTGTCTCATGGAGGGGCGCCAGAGCTGTTGGTGGGG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACATCTGCAGATCTGCTaGCCTTTGGTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQHLQIC*PLVSFI
Trigger: GATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGCCCAATTGGGCCACTaGGACATTGTGGAACATGAG +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMAQLGH*DIVEHE
Trigger: CTCATGTTCCACAATGTCCCAGTGGCCCAATTGGGC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAATGGCGCCTGAGGCTTTaGACCACACTGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKWRLRL*TTLDSW
Trigger: CCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCA...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCCTGTCCTGTTCCTCTaGACTCCACATGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIPVLFL*TPHGGA
Trigger: AGCTCCTCCATGTGGAGTCCAGAGGAACAGGACAGG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGAACTGTGCATCACACTaGGAGCCAGTGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMNCASH*EPVKER
Trigger: CCTCTCCTTCACTGGCTCCCAGTGTGATGCACAGTT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACACATGACTGACTCATaGCACCTGGTTACACTGAAC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQHMTDS*HLVTLN
Trigger: GTTCAGTGTAACCAGGTGCCATGAGTCAGTCATGTG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTACTATGTTGCCCAGGCTaGACTAGAAATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVLCCPG*TRNPGR
Trigger: GCGTCCAGGATTTCTAGTCCAGCCTGGGCAACATAG...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAGCTTCCTGAGGAGCTaGGACTATAGGCGCACACCA +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSSFLRS*DYRRTP
Trigger: TGGTGTGCGCCTATAGTCCCAGCTCCTCAGGAAGCT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGGCAGCAGCACTACATaGACTTGCCAGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRGSSTT*TCQELT
Trigger: TGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTAAACCGCAGATGGGCTaGGCGGAGACCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCKPQMG*AETLHC
Trigger: GCAGTGGAGGGTCTCCGCTCAGCCCATCTGCGGTTT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGAAGTACTATCACTGTaGGAAACCGCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVEVLSL*ETADGL
Trigger: CAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAACAGCTATGAGGCTCAGCATCTaGTTCATATCTATATTTTGG +
Preference number: 4 (lower is better)
Translates to: FPQIIAPLWHCTRAPPTAMRLSI*FISIFW
Trigger: CCAAAATATAGATATGAATCAGATGCTGAGCCTCAT...AGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATTTCTCAGATGTCACTaGACGGAAACTCTGGGACCG +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVFLRCH*TETLGP
Trigger: CGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAACACTGGACTCTTGGTaGGATGTGCCGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSTLDSW*DVPWCL
Trigger: CAAACACCACGGCACATCTCACCAAGAGTCCAGTGT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGGTTGGCGAACCTGCTaGAAACATGGATTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHGWRTC*KHGFAV
Trigger: AACTGCAAATCCATGTTTTCAGCAGGTTCGCCAACC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAATCCATATGTATCAGGTaGTCGGTTAACAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQSICIR*SVNSEV
Trigger: AACCTCGCTGTTAACCGAGCACCTGATACATATGGA...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGCAAAGTGTGCCATCTaGAGATCTGCTGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRAKCAI*RSAGLW
Trigger: CCAAAGGCCAGCAGATCTGCAGATGGCACACTTTGC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAACTCTTGGTGAGATGTaGCGTGGTGTTTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSTLGEM*RGVWHP
Trigger: GGGATGCCAAACACCACGGCACATCTCACCAAGAGT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGTGAGAAACCGCAGATaGGCTGAGCGGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVVRNRR*AERRPS
Trigger: GGAGGGTCTCCGCTCAGCCCATCTGCGGTTTCTCAC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGAGACAGCGACTGCGTaGATGAAGTACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHETATA*MKYYHC
Trigger: ACAGTGATAGTACTTCATCCACGCAGTCGCTGTCTC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAATAATCGCCCCGTTGTaGCATTGTACGAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSIIAPL*HCTRAP
Trigger: TGGGGCTCTCGTACAATGCCACAACGGGGCGATTAT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGAGTCCTTTGCATGTTaGCTAAGGCTTGGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHESFAC*LRLGLE
Trigger: TTCAAGCCCAAGCCTTAGCCAACATGCAAAGGACTC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGGCTTTGGACCACACTaGACTCTTGGTGAGATGTGC +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRGFGPH*TLGEMC
Trigger: GCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTCCTGTGCCCTAGTCTaGTCTTGTCAGGATAACCAT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHSCALV*SCQDNH
Trigger: ATGGTTATCCTGACAAGACCAGACTAGGGCACAGGA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp GCAGAGTTTCATGTAAACCCAGGCCAGGATCACAGTTaGTGCCAACTTCACTGTGCTATGCCAATCTCATTG +
Preference number: 4 (lower is better)
Translates to: AEFHVNPGQDHS*CQLHCAMPISL
Trigger: CAATGAGATTGGCATAGCACAGTGAAGTTGGCACAAACTGTGATCCTGGCCTGGGTTTACATGAAACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGAACTTGCCAGGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSELARS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTCAGCGACTGCGTGGATaGAGTACTATCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGQRLRG*STITVR
Trigger: TCTCACAGTGATAGTACTTCATCCACGCAGTCGCTG...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTTTCATCTCCTCCCAGTaGTCTTGTTCCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGFISSQ*SCSSSP
Trigger: TGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAA...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTCCATGGCCAGCTATCTaGTGTCTACAGTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGPWPAI*CLQCPV
Trigger: AACTGGACACTGTAGACATCAGATAGCTGGCCATGG...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGGACATTGTGGAACATaGGTCCTTTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMGHCGT*VLCMLA
Trigger: AGCCAACATGCAAAGGACTCATGTTCCACAATGTCC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTTCAACAACGAACGGCTaGATTTTGGTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSSTTNG*ILVSAP
Trigger: TGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGA...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAACAAGATCAGTATTCTaGATGGCACATGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQTRSVF*MAHAQI
Trigger: AATCTGGGCATGTGCCATTCAGAATACTGATCTTGT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAATTTCCATTTTCCAGTTaGAGAAACCAGGATACAGGC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQFPFSS*RNQDTG
Trigger: GCCTGTATCCTGGTTTCTTCAACTGGAAAATGGAAA...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTAGAGGAAACTCCCCCTaGGCCTGCAGGCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCRGNSP*ACRHPQ
Trigger: TTGGGGATGCCTGCAGGCTCAGGGGGAGTTTCCTCT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCTCCATCTCCAAGCTaGCCTCTGTGGATTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSPSPS*PLWIGA
Trigger: GGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAAGATCTCACTATGTTaGCCAGGCTGGACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQKISLC*PGWTRN
Trigger: ATTTCTAGTCCAGCCTGGGCAACATAGTGAGATCTT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACACCACACTTTGAGATaGGCTCTGAGACCCCGGATG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTHHTLR*ALRPRM
Trigger: CATCCGGGGTCTCAGAGCCCATCTCAAAGTGTGGTG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGTCACTGTGAGCTTCTaGCTGGCGGCTCTATATTCA +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRVTVSF*LAALYS
Trigger: TGAATATAGAGCCGCCAGCCAGAAGCTCACAGTGAC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGACTTCGGTCCTTATCTaGGAGGCCCTGTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVTSVLI*EALCPH
Trigger: GTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGAGGCAGCCACATCTCTaGGCTCCAGCTTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVRQPHL*APAWQR
Trigger: CCTTTGCCAAGCTGGAGCCCAGAGATGTGGCTGCCT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTTTCATTTCCCCTTCTaGGTGCAGGTGGCTGAGATA +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMFHFPF*VQVAEI
Trigger: TATCTCAGCCACCTGCACCCAGAAGGGGAAATGAAA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCTCCACTGCTGTTCTaGCCCAGGGCAATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSPLLF*PRAIQP
Trigger: TGGCTGGATTGCCCTGGGCCAGAACAGCAGTGGAGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAGATCTGCTGGCCTTTaGTTTCCTTCATCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSRSAGL*FPSSPP
Trigger: GGGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGCCACTGGGACATTGTaGAACATGAGTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMATGTL*NMSPLH
Trigger: ATGCAAAGGACTCATGTTCCACAATGTCCCAGTGGC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACATCACTGGCCCAATTaGGCCACTGGGACATTGTGG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTHHWPN*ATGTLW
Trigger: CCACAATGTCCCAGTGGCCCAATTGGGCCAGTGATG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACACTGTCAGAAGATGTaGACAGCTCTTCGTCATCCC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSHCQKM*TALRHP
Trigger: GGGATGACGAAGAGCTGTCCACATCTTCTGACAGTG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAATAACGCCGTTGGCTaGCTCCATCCAAATCTTCGC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSNNAVG*LHPNLR
Trigger: GCGAAGATTTGGATGGAGCCAGCCAACGGCGTTATT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACCTCTGGACTCCACATaGAGGAGCTGTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTPLDST*RSCQWH
Trigger: ATGCCACTGACAGCTCCTCCATGTGGAGTCCAGAGG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTATTCAAATTAGCCTCTaGACTCCACATGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSIQISL*TPHGGA
Trigger: AGCTCCTCCATGTGGAGTCCAGAGGCTAATTTGAAT...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGTGTTTCAGGCTCACTaGCACCTAGGACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIVFQAH*HLGLWR
Trigger: TCTCCATAGTCCTAGGTGCCAGTGAGCCTGAAACAC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTTTGGAAACCCACAGTaGTGTCCACACCGAATCATC +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMFGNPQ*CPHRII
Trigger: GATGATTCGGTGTGGACACCACTGTGGGTTTCCAAA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTTTACGAATCCAGCCTaGCTTCATGAGCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHFTNPA*LHEPIL
Trigger: AAGGATAGGCTCATGAAGCCAGGCTGGATTCGTAAA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACAGTACAAGGACCAGTaGATGCCAGGGCTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTQYKDQ*MPGLRW
Trigger: CCACCTAAGCCCTGGCATCCACTGGTCCTTGTACTG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp GGGTTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCAGTAGACAGCAACACA +
Preference number: 4 (lower is better)
Translates to: GLVESVFETLKP*PGHLVSVDSNT
Trigger: TGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTTCACAATGGTCACTGTaGGCTTCTGGCTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCSQWSL*ASGWRL
Trigger: GAGCCGCCAGCCAGAAGCTCACAGTGACCATTGTGA...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGAACTTGCCAGGAGTTaGCACCACTTCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRELARS*HHFGPY
Trigger: ATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGAAGTACTATCACTGTaGGAAACCGCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKEVLSL*ETADGL
Trigger: CAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTGTTTTTGAAACCCTaGAACCCTTGCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLFLKP*NPCQDT
Trigger: AGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGGACATTGTGGAACATaGGTCCTTTGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSGHCGT*VLCMLA
Trigger: AGCCAACATGCAAAGGACTCATGTTCCACAATGTCC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGAGCAGCCATATATATaGAACTCCCATGACCTGAAA +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHEQPYI*NSHDLK
Trigger: TTTCAGGTCATGGGAGTTTCATATATATGGCTGCTC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGGGCCTCAGATCTCCATaGCTGCCTATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKGLRSP*LPMSLF
Trigger: GAACAAGCTCATAGGCAGTCATGGAGATCTGAGGCC...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGTTCAGAGCTGCTGTGTaGGCCAGATGCTTACATACC +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRFRAAV*ARCLHT
Trigger: GGTATGTAAGCATCTGGCTCACACAGCAGCTCTGAA...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTTTCTCTCTCTCTCTTaGACCTCTGGACCACATACG +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIFLSLS*TSGPHT
Trigger: CGTATGTGGTCCAGAGGTTCAAGAGAGAGAGAGAAA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVIWEAL*PHNGHC
Trigger: ACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGAT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGCGGAGACCCTCCACTaGTTATATTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIAETLH*LYYFLA
Trigger: AGCCAAGAAGTAATATAAGCAGTGGAGGGTCTCCGC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGCACATGTGGTAACTTaGGGTCATCACTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKAHVVT*GHHWPN
Trigger: ATTGGGCCAGTGATGACCGCAAGTTACCACATGTGC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGCACATGTGGTAACTTaGGGTCATCACTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRAHVVT*GHHWPN
Trigger: ATTGGGCCAGTGATGACCGCAAGTTACCACATGTGC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTACTTTTCCTGATTTCATaGAGGTGGAATGCCACATCC +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVLFLIS*RWNATS
Trigger: GGATGTGGCATTCCACCTGCATGAAATCAGGAAAAG...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAAGGTGTGAGCCACCATaGCCAACCTATAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVRCEPP*PTYKDL
Trigger: AAGATCTTTATAGGTTGGGCATGGTGGCTCACACCT...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAACTATTTTATCCATCTaGCATTCTCCAACCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQTILSI*HSPTPN
Trigger: GTTAGGGGTTGGAGAATGGCAGATGGATAAAATAGT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATTCAGAATTCAGAGCTaGTGTGTGAGCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVFRIQS*CVSQML
Trigger: AAGCATCTGGCTCACACAGCAGCTCTGAATTCTGAA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAATGGCACCTGCAAATTaGTCCTGTCCTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSMAPAN*SCPVPS
Trigger: AGAAGGAACAGGACAGGACCAATTTGCAGGTGCCAT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430451.3
ENST00000555409.1
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTACTTCGGTCCTTATCTaGGAGGCCCTGTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCTSVLI*EALCPH
Trigger: GTGAGGGCACAGGGCCTCCCAGATAAGGACCGAAGT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGAGACAGCGACTGCGTaGATGAAGTACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSETATA*MKYYHC
Trigger: ACAGTGATAGTACTTCATCCACGCAGTCGCTGTCTC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAATAATCGCCCCGTTGTaGCATTGTACGAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTIIAPL*HCTRAP
Trigger: TGGGGCTCTCGTACAATGCCACAACGGGGCGATTAT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGCGAGGTTTCGGAAATaGCTGCCTTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRARFRK*LPLIIS
Trigger: GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGCTGACCACGCCGAATaGACGTCTTGCAACGGGACA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCADHAE*TSCNGT
Trigger: TGTCCCGTTGCAAGACGTCCATTCGGCGTGGTCAGC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACATCTGCAGATCTGCTaGCCTTTGGTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSHLQIC*PLVSFI
Trigger: GATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACATCTGCAGATCTGCTaGCCTTTGGTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRHLQIC*PLVSFI
Trigger: GATGAAGGAAACCAAAGGCCAGCAGATCTGCAGATG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGAGTCCTTTGCATGTTaGCTAAGGCTTGGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSESFAC*LRLGLE
Trigger: TTCAAGCCCAAGCCTTAGCCAACATGCAAAGGACTC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTTGGCGCCTGAGGCTTTaGACCACACTGGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCWRLRL*TTLDSW
Trigger: CCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCA...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTGTGCACCATCCCCCTaGTTAGAACTTTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMCAPSP*LELLDH
Trigger: ATGATCCAAAAGTTCTAACCAGGGGGATGGTGCACA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTTGGGAGGGGAGAGATaGACAAGTTTGATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHLGGER*TSLILQ
Trigger: TTGAAGAATCAAACTTGTCCATCTCTCCCCTCCCAA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp CACATGACTGACTCATGGCACCTGGTTACACTGAACTaGAAGTGGTTTGCTCCTGAAGACTTCTCTAGATTA +
Preference number: 4 (lower is better)
Translates to: HMTDSWHLVTLN*KWFAPEDFSRL
Trigger: TAATCTAGAGAAGTCTTCAGGAGCAAACCACTTCAAGTTCAGTGTAACCAGGTGCCATGAGTCAGTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp ATTGGTCTATCTGCCAAGGTAGGGACACTCCCAATGTaGACCTTTACCTATTTCATAAGGATGCCCCAAATG +
Preference number: 4 (lower is better)
Translates to: IGLSAKVGTLPM*TFTYFIRMPQM
Trigger: CATTTGGGGCATCCTTATGAAATAGGTAAAGGTCAACATTGGGAGTGTCCCTACCTTGGCAGATAGACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCACTCTATATTCAAAGATaGCATCTAGGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSLYIQR*HLGHHT
Trigger: AGTGTGGTGACCTAGATGTCATCTTTGAATATAGAG...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCTTGACCCACAGAATTaGGGAGAAAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMLDPQN*GERVFH
Trigger: ATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGCAACGGGACATCTCTTaGCCCACAGAATTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKQRDIS*PTELRR
Trigger: TCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTG...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTTCCAAATCAGACCATTaGGAAACCCAAAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGSKSDH*ETQNSH
Trigger: GTGGGAGTTTTGGGTTTCTCAATGGTCTGATTTGGA...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAGTTTGATTCTTTTATaGGGCTCAGCATCTGATTCA +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQSLILL*GSASDS
Trigger: TGAATCAGATGCTGAGCCTCATAAAAGAATCAAACT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGAATTTGCATCCTCTTaGCTCCAATCATTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSEFASS*LQSLSC
Trigger: ACAAGACAATGATTGGAGTCAAGAGGATGCAAATTC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAGAAGAGCTGCACATTaGGCGCAGGGATTAAATGTA +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRRRAAH*AQGLNV
Trigger: TACATTTAATCCCTGCGCTCAATGTGCAGCTCTTCT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATTCAGGCAAAATCGCTaGAAGACCTACTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSFRQNR*KTYSSN
Trigger: GTTGCTTGAGTAGGTCTTTCAGCGATTTTGCCTGAA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGAGAGGCCTTGTTTGTaGTCGATCAAGAGGTACACA +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRERPCL*SIKRYT
Trigger: TGTGTACCTCTTGATCGATCACAAACAAGGCCTCTC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGCAAGTAGCACATGACTaGCTCATGGCACCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKQVAHD*LMAPGY
Trigger: GTAACCAGGTGCCATGAGTCAGTCATGTGCTACTTG...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTCCATGACTGCCTATaGGCTTGTTCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLHDCL*ACSVKP
Trigger: AGGCTTTACAGAACAAGCTCATAGGCAGTCATGGAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGGCCACCAAAGATTTTaGGTTAATTTGCGTGGACTA +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVGHQRF*VNLRGL
Trigger: TAGTCCACGCAAATTAACTCAAAATCTTTGGTGGCC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTATCTGGGAGGCCCTGTaGCCTCACAATGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCIWEAL*PHNGHC
Trigger: ACAGTGACCATTGTGAGGGCACAGGGCCTCCCAGAT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGCAAAGTGTGCCATCTaGAGATCTGCTGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVAKCAI*RSAGLW
Trigger: CCAAAGGCCAGCAGATCTGCAGATGGCACACTTTGC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGAGGCAGATACTTCTGTaGCATCTTCTCCGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRRQILL*HLLRVS
Trigger: TGACACACGGAGAAGATGGCACAGAAGTATCTGCCT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGATTGCTCAGAAGAGCTaGACATTGAGCGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRIAQKS*TLSAGI
Trigger: AATCCCTGCGCTCAATGTGCAGCTCTTCTGAGCAAT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCAGGATCACAGTTTGTaGCAACTTCACTGTGCTATG +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIQDHSL*QLHCAM
Trigger: CATAGCACAGTGAAGTTGGCACAAACTGTGATCCTG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAATGTGCCGTGGTGTTTaGCATCCCCTCTTTCACATG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTMCRGV*HPLFHM
Trigger: CATGTGAAAGAGGGGATGCCAAACACCACGGCACAT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCATTTCCCCTTCTGGGTTGGAGGAGCTGTCAGTaGCATAGGAATCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: LYYFLAPEPESLSFPLLGWRSCQ*HRNLQI
Trigger: GATTTGAAGATTCCTATGCCACTGACAGCTCCTCCA...ACCCAGAAGGGGAAATGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATGGAGGAGCTGTCAGTaGCATAGGAATCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRWRSCQ*HRNLQI
Trigger: GATTTGAAGATTCCTATGCCACTGACAGCTCCTCCA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAACCAGGATACAGGCTaGCTAAGTAATTTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQNQDTG*LSNFLK
Trigger: CTTAAGAAAATTACTTAGCCAGCCTGTATCCTGGTT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTGGTTCTACCACAGTTaGACTCTATTAAGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHWFYHS*TLLRLN
Trigger: ATTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGACCTTGTCATATGTATaGCCCTGTTATATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMTLSYV*PCYIVG
Trigger: CCCCACTATATAACAGGGCCATACATATGACAAGGT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTATATGGCCCACTGATTaGCAGAGCTCTAAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIIWPTD*QSSKSV
Trigger: GACACTTTTAGAGCTCTGCCAATCAGTGGGCCATAT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGATGCCTATGAAACACTaGGAGAGGATTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKMPMKH*ERIGVA
Trigger: AGCCACCCCAATCCTCTCCCAGTGTTTCATAGGCAT...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGGCAGCAGCACTACATaGACTTGCCAGGAGTTGACA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCGSSTT*TCQELT
Trigger: TGTCAACTCCTGGCAAGTTCATGTAGTGCTGCTGCC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGAAGTACTATCACTGTaGGAAACCGCAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVEVLSL*ETADGL
Trigger: CAGCCCATCTGCGGTTTCTCACAGTGATAGTACTTC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCAGCGACTGCGTGGATaGAGTACTATCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVQRLRG*STITVR
Trigger: TCTCACAGTGATAGTACTTCATCCACGCAGTCGCTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCAACGGGACATCTCTTaGCCCACAGAATTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVQRDIS*PTELRR
Trigger: TCTCCTCAATTCTGTGGGTCAAGAGATGTCCCGTTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGTGACATCAGACAGCTaGAAGAGGGCCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCVTSDS*KRATWK
Trigger: TTTCCAGGTGGCCCTCTTTCAGCTGTCTGATGTCAC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTTCATCTCCTCCCAGTaGTCTTGTTCCTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVFISSQ*SCSSSP
Trigger: TGGAGAGGAGGAACAAGATCACTGGGAGGAGATGAA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCTCAAAACTTCCAGCTaGAACAGAGGAAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMLKTSS*NRGKKY
Trigger: GTATTTCTTTCCTCTGTTTCAGCTGGAAGTTTTGAG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCCATGGCCAGCTATCTaGTGTCTACAGTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVPWPAI*CLQCPV
Trigger: AACTGGACACTGTAGACATCAGATAGCTGGCCATGG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGAATTTGCATCCTCTTaGCTCCAATCATTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMEFASS*LQSLSC
Trigger: ACAAGACAATGATTGGAGTCAAGAGGATGCAAATTC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACTAAAAATAGGTGACTaGGCAATTGCTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRLKIGD*AIAQKS
Trigger: GCTCTTCTGAGCAATTGCTCAGTCACCTATTTTTAG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGAAACTAAAAATAGGTaGCTGAGCAATTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHETKNR*LSNCSE
Trigger: TTCTGAGCAATTGCTCAGTCACCTATTTTTAGTTTC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGTCAAAACGTGGAGCTaGGGAGGAGTTATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRVKTWS*GGVMCF
Trigger: AAAACACATAACTCCTCCTCAGCTCCACGTTTTGAC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACTCAGTTCTACTCAATaGCTTAGCCACGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLSSTQ*LSHAAK
Trigger: CTTTGCAGCGTGGCTAAGTCATTGAGTAGAACTGAG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTACACCACCGTAATTGGTaGAATCAGGATTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVHHRNW*NQDFSI
Trigger: AATTGAGAAATCCTGATTTCACCAATTACGGTGGTG...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATTTAGAGGGATGCTCTaGAATCTATCCATGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRFRGML*NLSMWS
Trigger: TGACCACATGGATAGATTTCAGAGCATCCCTCTAAA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGTCTGTATGTTCGTCCTaGCCCTGTGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKSVCSS*PCVSYQ
Trigger: CTGGTAAGAAACACAGGGGCAGGACGAACATACAGA...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGCCGAATGGACGTCTTaGAACGGGACATCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCAEWTS*NGTSLD
Trigger: GTCAAGAGATGTCCCGTTGCAAGACGTCCATTCGGC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGACACAGCACACAAATaGAGGTTAGCAAACCTAGGA +
Preference number: 4 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKDTAHK*RLANLG
Trigger: TCCTAGGTTTGCTAACCTGCATTTGTGTGCTGTGTC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGTTCAGTTCCTTCAGTaGTCTGGATTGAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIVQFLQ*SGLNVN
Trigger: GTTCACATTCAATCCAGAGCACTGAAGGAACTGAAC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAAAGTATTGGTCTATCTaGCAAGGTAGGGACACTCCC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTKYWSI*QGRDTP
Trigger: GGGAGTGTCCCTACCTTGGCAGATAGACCAATACTT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTATACCTTCATCTCTaGAATAATGCCAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLYLHL*NNARFC
Trigger: GCAGAACCTGGCATTATTGCAGAGATGAAGGTATAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGTCACTGTGAGCTTCTaGCTGGCGGCTCTATATTCA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVVTVSF*LAALYS
Trigger: TGAATATAGAGCCGCCAGCCAGAAGCTCACAGTGAC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCCTTATAGACAGGATTaGGCTGACCACGCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCPYRQD*ADHAEW
Trigger: CCATTCGGCGTGGTCAGCCCAATCCTGTCTATAAGG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCACTGTCAGAAGATGTaGACAGCTCTTCGTCATCCC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVHCQKM*TALRHP
Trigger: GGGATGACGAAGAGCTGTCCACATCTTCTGACAGTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTACTGAACGGAAACTCTaGGACCGGGACACGGAAATC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCTERKL*DRDTEI
Trigger: GATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGAATAACGCCGTTGGCTaGCTCCATCCAAATCTTCGC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVNNAVG*LHPNLR
Trigger: GCGAAGATTTGGATGGAGCCAGCCAACGGCGTTATT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACAAAATGGGTGGGTCTTaGGAACAGAAAATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHKMGGS*EQKMKY
Trigger: ATACTTCATTTTCTGTTCCCAAGACCCACCCATTTT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTGATTTCATGCAGGTaGAATGCCACATCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLISCR*NATSKD
Trigger: GTCTTTGGATGTGGCATTCCACCTGCATGAAATCAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTGTGTGTCTAGGATATaGTTTTGTGACCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWICVSRI*FCDPRE
Trigger: TTCCCTTGGGTCACAAAACCATATCCTAGACACACA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTTATGGACTATCAACTaGGCAACACGAAAAACTTGC +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMLWTIN*ATRKTC
Trigger: GCAAGTTTTTCGTGTTGCCCAGTTGATAGTCCATAA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGAAAAGGCAAAACTCTaGGGACAGTACAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTEKAKL*GQYKDQ
Trigger: CTGGTCCTTGTACTGTCCCCAGAGTTTTGCCTTTTC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCAGATACAAATCATTaGCCAGGCCTCCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSDTNH*PGLPLH
Trigger: GTGAAGGGGGAGGCCTGGCCAATGATTTGTATCTGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTACACTGGGAGAGGATTaGGGTGGCTTCCACCTTACA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCTLGED*GGFHLT
Trigger: TGTAAGGTGGAAGCCACCCCAATCCTCTCCCAGTGT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp GTTGTTCTAAAGAAAGGTCTGCATTCAACTCAAAGGTaGGCGAACCTGCTGAAAACATGGATTTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VVLKKGLHSTQR*ANLLKTWICSL
Trigger: CAAACTGCAAATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTTTAGAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTCTATATTCAAAGATaGCATCTAGGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLYIQR*HLGHHT
Trigger: AGTGTGGTGACCTAGATGTCATCTTTGAATATAGAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACGGAAATCATCAACGTaGCATCAGACAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTRKSST*HQTAER
Trigger: TCTTTCAGCTGTCTGATGTCACGTTGATGATTTCCG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCCAAATCAGACCATTaGGAAACCCAAAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSKSDH*ETQNSH
Trigger: GTGGGAGTTTTGGGTTTCTCAATGGTCTGATTTGGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTCAAAACTTCCAGCTaGAACAGAGGAAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLKTSS*NRGKKY
Trigger: GTATTTCTTTCCTCTGTTTCAGCTGGAAGTTTTGAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCAACAACGAACGGCTaGATTTTGGTTTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSTTNG*ILVSAP
Trigger: TGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAAGCAGCAGGAAAATATaGGAGGGAAAAATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSSRKI*EGKIQG
Trigger: GCCCTGAATTTTTCCCTCTCATATTTTCCTGCTGCT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGATGAAATCTACACATTaGAAAGGCAGAAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMMKSTH*KGRSCV
Trigger: AACACAGCTTCTGCCTTTTCAATGTGTAGATTTCAT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGTACCAGGCTTATCTCTaGTTAGGCTGTCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKYQAYL*LGCPDE
Trigger: TTCATCAGGACAGCCTAATCAGAGATAAGCCTGGTA...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAGACCAGCTTTAACCTaGAAATACAGGTCAAATCCT +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRRPALT*KYRSNP
Trigger: AGGATTTGACCTGTATTTTCAGGTTAAAGCTGGTCT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTAGGCTACATACTGTATaGCATTCTGGAAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIRLHTV*HSGKGK
Trigger: TTTGCCTTTTCCAGAATGTCATACAGTATGTAGCCT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAATTACTGACTGCCTTTaGCAACCACCAAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTITDCL*QPPKLS
Trigger: GCTGAGTTTTGGTGGTTGTCAAAGGCAGTCAGTAAT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACCACATGGAATGTTCTaGAGATTGTCAGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRPHGMF*RLSEVS
Trigger: AGAAACTTCTGACAATCTTCAGAACATTCCATGTGG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCTGTATGTTCGTCCTaGCCCTGTGTTTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSVCSS*PCVSYQ
Trigger: CTGGTAAGAAACACAGGGGCAGGACGAACATACAGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGACACAGCACACAAATaGAGGTTAGCAAACCTAGGA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTDTAHK*RLANLG
Trigger: TCCTAGGTTTGCTAACCTGCATTTGTGTGCTGTGTC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CATAGTACGCCTGTTATAAACGGAAATCATCAACGTGACATCAGACAGCTGAAAGTTCAGTTCCTTCAGTaGTCTGGATTGAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: HSTPVINGNHQRDIRQLKVQFLQ*SGLNVN
Trigger: GTTCACATTCAATCCAGAGCACTGAAGGAACTGAAC...TTTCAGCTGTCTGATGTCACGTTGATGATTTCCGTTTATAACAGGCGTACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR GCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAAAGCCACTTCTTTGTaGTGCTACTTAATCAATCGC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSKATSL*CYLINR
Trigger: GCGATTGATTAAGTAGCAGCACAAAGAAGTGGCTTT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTGCTGAGGGTGAATGTTaGTGTATATTCAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIAEGEC*CIFKMY
Trigger: GTACATCTTGAATATACAGCAACATTCACCCTCAGC...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGAGTCCAAAACAACTGTaGATCACACTGGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSPKQL*ITLGAS
Trigger: ACTGGCTCCCAGTGTGATGCACAGTTGTTTTGGACT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCAAGAAGAGAAAGTGTaGACCATCCCCCTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVQEEKV*TIPLVR
Trigger: TCTAACCAGGGGGATGGTGCACACTTTCTCTTCTTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGCAACACGAAAAACTTaGTTTCAGTCAGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHATRKT*FQSEFS
Trigger: TGAAAATTCTGACTGAAAGCAAGTTTTTCGTGTTGC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATTCCCATCTGATAGATaGAACAATGAAGGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVFPSDR*NNEGLK
Trigger: TTTCAAGCCTTCATTGTTGCATCTATCAGATGGGAA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTTTCATTTCCCCTTCTaGGTGCAGGTGGCTGAGATA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVFHFPF*VQVAEI
Trigger: TATCTCAGCCACCTGCACCCAGAAGGGGAAATGAAA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGAGACAGCGACTGCGTaGATGAAGTACTATCACTGT +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVETATA*MKYYHC
Trigger: ACAGTGATAGTACTTCATCCACGCAGTCGCTGTCTC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGCGAGGTTTCGGAAATaGCTGCCTTTGATCATTTCC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVARFRK*LPLIIS
Trigger: GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGCGAACGGCTGAATTTTaGTTTCTGCTCCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKRTAEF*FLLQSC
Trigger: ACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCG...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGGAAGAAGACAGGCCTaGAGTGTTATTGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRGRRQA*SVIVDS
Trigger: AGAATCAACAATAACACTCCAGGCCTGTCTTCTTCC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTATACCCAGCGAATGTTTaGTATTTTGTAGAGACAAGA +
Preference number: 4 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVYPANV*YFVETR
Trigger: TCTTGTCTCTACAAAATACCAAACATTCGCTGGGTA...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCGGAAATCATCAACGTaGCATCAGACAGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVRKSST*HQTAER
Trigger: TCTTTCAGCTGTCTGATGTCACGTTGATGATTTCCG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCCAAATCAGACCATTaGGAAACCCAAAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSKSDH*ETQNSH
Trigger: GTGGGAGTTTTGGGTTTCTCAATGGTCTGATTTGGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAATGAGGCTCAGCATCTaGTTCATATCTATATTTTGG +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSMRLSI*FISIFW
Trigger: CCAAAATATAGATATGAATCAGATGCTGAGCCTCAT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAGTTTGATTCTTTTATaGGGCTCAGCATCTGATTCA +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSSLILL*GSASDS
Trigger: TGAATCAGATGCTGAGCCTCATAAAAGAATCAAACT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGAAATCTCAAATTGTTTaGTCACCTCCTCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRKSQIV*SPPRHC
Trigger: ACAGTGACGAGGAGGTGATCAAACAATTTGAGATTT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATCATTCCACACAAGCTaGAAATATTTCTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSSFHTS*KYFSIH
Trigger: GTGAATGGAGAAATATTTTCAGCTTGTGTGGAATGA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGTCAAAGACTGAACCCTaGAAGCATAGTAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRSKTEP*KHSRVI
Trigger: GATAACTCTACTATGCTTTCAGGGTTCAGTCTTTGA...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTAAGATGATGATTCTATaGCACCCCCATCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCKMMIL*HPHPHQ
Trigger: TTGGTGGGGATGGGGGTGTCATAGAATCATCATCTT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGAACAAAAACCAGTGCTaGTTCAATGTCAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRNKNQC*FNVKSP
Trigger: GGGAGATTTGACATTGAAGCAGCACTGGTTTTTGTT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTTGAGAACAAGTGGATaGGCTATTATATCAACAAGC +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWILRTSG*AIISTS
Trigger: GCTTGTTGATATAATAGCGCATCCACTTGTTCTCAA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACTTGATTTAGAGGGATaGTCTGAAATCTATCCATGT +
Preference number: 4 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRLDLEG*SEIYPC
Trigger: ACATGGATAGATTTCAGAGCATCCCTCTAAATCAAG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCCAACTGCTTCAATGTaGACTCATAGCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVPTASM*THSTPK
Trigger: CTTTGGAGTGCTATGAGTGCACATTGAAGCAGTTGG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTCTAACTTACTGTCTTaGAAAGGGCATTCAGTATTT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMSNLLS*KGHSVF
Trigger: AAATACTGAATGCCCTTTGCAAGACAGTAAGTTAGA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCTTGGGCTTGAATTTTaGGCAGAGTCCTGCAAATCA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLGLEF*AESCKS
Trigger: TGATTTGCAGGACTCTGCCCAAAATTCAAGCCCAAG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGATCAGTATTCTGAATaGCACATGCCCAGATTGCAA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTDQYSE*HMPRLQ
Trigger: TTGCAATCTGGGCATGTGCCATTCAGAATACTGATC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAGCATTAGTGAGCAATaGAAAGCAGTTAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSSISEQ*KAVSKL
Trigger: TAACTTGCTAACTGCTTTCCATTGCTCACTAATGCT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGAATTCTTTTCACTGCTaGAATGGAATGATGCATTTC +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMNSFHC*NGMMHF
Trigger: GAAATGCATCATTCCATTCCAGCAGTGAAAAGAATT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTTGTCACCTCTTTCTCTaGCGGCTACTGTTACCAGTT +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCCHLFL*RLLLPV
Trigger: AACTGGTAACAGTAGCCGCCAGAGAAAGAGGTGACA...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCACGTCATTGTGCATTaGTCAAAACCCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIHVIVH*SKPIKY
Trigger: GTATTTTATGGGTTTTGACCAATGCACAATGACGTG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCTGTTTAGATTCCAATaGAGGGAAAAACTCATAGAT +
Preference number: 4 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMLFRFQ*REKLID
Trigger: ATCTATGAGTTTTTCCCTCCATTGGAATCTAAACAG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATCTCTCTTGAACCTCTaGACCACATACGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSLLNL*TTYEFS
Trigger: AGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp ACTATGACGGGGCACAATCACAAAGCTTCCTTTCTCTaGGCAGGAGTGGTAAATGTAAAGTCATATAAACTA +
Preference number: 4 (lower is better)
Translates to: TMTGHNHKASFL*AGVVNVKSYKL
Trigger: TAGTTTATATGACTTTACATTTACCACTCCTGCCAAGAGAAAGGAAGCTTTGTGATTGTGCCCCGTCATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGACACAGCACACAAATaGAGGTTAGCAAACCTAGGA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCDTAHK*RLANLG
Trigger: TCCTAGGTTTGCTAACCTGCATTTGTGTGCTGTGTC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTAGTAGAGTTATCCTGTaGCCTAGTCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCSRVIL*PSLVLS
Trigger: TGACAAGACCAGACTAGGGCACAGGATAACTCTACT...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACTAAAGCACAGTAACTaGACAAGAGGTAACAATAAT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLKHSN*TRGNNN
Trigger: ATTATTGTTACCTCTTGTGCAGTTACTGTGCTTTAG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAAACTTCACTGTGCTATaGCAATCTCATTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTNFTVL*QSHCLS
Trigger: GCTAAGACAATGAGATTGGCATAGCACAGTGAAGTT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGGCTTCCTAGACACTTaGCCCAATAAATTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCGFLDT*PNKFSQ
Trigger: TTGGCTGAATTTATTGGGGCAAGTGTCTAGGAAGCC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTAGTATAGGTGATTATTaGGTACCAAGAAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: KKGLHSTQRLANLLKTWISIGDY*VPRNKD
Trigger: ATCCTTGTTTCTTGGTACCCAATAATCACCTATACT...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAAATCAGAGTTTTTACTaGCAGACTTCCGATATTTCT +
Preference number: 4 (lower is better)
Translates to: LVESVFETLKPLPGHLVSNQSFY*QTSDIS
Trigger: AGAAATATCGGAAGTCTGCCAGTAAAAACTCTGATT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGGCAGCTGCATTCATATaGTGGCATAATAAAAGACTG +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKAAAFI*WHNKRL
Trigger: CAGTCTTTTATTATGCCACCATATGAATGCAGCTGC...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGACAAATATAGCACTGTaGTGTTCAAAATGTTCACGG +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRTNIAL*CSKCSR
Trigger: CCGTGAACATTTTGAACACCACAGTGCTATATTTGT...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp ATACAAGATCAGTATTCTGAATGGCACATGCCCAGATaGCAAGTAGTGACTAATATATGTTGCTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: IQDQYSEWHMPR*QVVTNICCCKC
Trigger: GCATTTGCAGCAACATATATTAGTCACTACTTGCAATCTGGGCATGTGCCATTCAGAATACTGATCTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp TATTTACGAATCCAGCCTGGCTTCATGAGCCTATCCTaGTTACAGTATCTGAACGTTGGTTTTTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YLRIQPGFMSLS*LQYLNVGFCFS
Trigger: AGAAAAACAAAAACCAACGTTCAGATACTGTAACAAGGATAGGCTCATGAAGCCAGGCTGGATTCGTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp TTTGGATCACAGTTGAAATATGTAGTCAAACTGCCATaGTCACCAACTCTTTTGATAAAGGCGACAAGATGC +
Preference number: 4 (lower is better)
Translates to: FGSQLKYVVKLP*SPTLLIKATRC
Trigger: GCATCTTGTCGCCTTTATCAAAAGAGTTGGTGACAATGGCAGTTTGACTACATATTTCAACTGTGATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp TATGAAGAAAATGATTACATGAGTGAGGAAAGTCACTaGGGAGGGGAGAGATGGACAAGTTTGATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YEENDYMSEESH*GGERWTSLILQ
Trigger: TTGAAGAATCAAACTTGTCCATCTCTCCCCTCCCAAGTGACTTTCCTCACTCATGTAATCATTTTCTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCTTGACCCACAGAATTaGGGAGAAAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCLDPQN*GERVFH
Trigger: ATGGAAAACTCTTTCTCCTCAATTCTGTGGGTCAAG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGATTACTGACATTCTATaGATATGGCCCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVITDIL*IWPTDW
Trigger: CCAATCAGTGGGCCATATTCATAGAATGTCAGTAAT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATTTCATGAACTATCATaGATTCAGTTGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTFHELS*IQLQQT
Trigger: TGTCTGCTGCAACTGAATTCATGATAGTTCATGAAA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCTGAATTTTGGTTTCTaGTCCAATCCTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLNFGF*SNPVCF
Trigger: AAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR GCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGCCACTTCTTTGTGCTaGTACTTAATCAATCGCACT +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCATSLC*YLINRT
Trigger: AGTGCGATTGATTAAGTAGCAGCACAAAGAAGTGGC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAAGCAACAAAAACCAGTaGTGCTTCAATGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTSNKNQ*CFNVKS
Trigger: AGATTTGACATTGAAGCAGCACTGGTTTTTGTTGCT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGGAGGACTCAAAACAGTaGTTTGGCAATTTGATTATA +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCREDSKQ*FGNLII
Trigger: TATAATCAAATTGCCAAAGCACTGTTTTGAGTCCTC...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTGAAAACATGGATTTaGAGTTTGTTACATGATCAG +
Preference number: 4 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLKTWI*SLLHDQ
Trigger: CTGATCATGTAACAAACTGCAAATCCATGTTTTCAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGCTTATATTACTTCTTaGCTCCAGAACCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCAYITS*LQNQSH
Trigger: GTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGTGGCACCTAGGACTATaGAGAATATTGACATTTGAT +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKWHLGL*RILTFD
Trigger: ATCAAATGTCAATATTCTCCATAGTCCTAGGTGCCA...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGATAAATGCAAAGACTTaGTTCTACCACAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKINAKT*FYHSWT
Trigger: AGTCCAACTGTGGTAGAACCAAGTCTTTGCATTTAT...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAATACGAATTCTCTACTaGAAAACTAGAGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTIRILY*KTRGGT
Trigger: AGTTCCTCCTCTAGTTTTCCAGTAGAGAATTCGTAT...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp TTCACCCCATACCCTGAACTAAAACTCAATGATCTATaGGCACAAATTAACTCATCAGTGGTCTTAATTGTG +
Preference number: 4 (lower is better)
Translates to: FTPYPELKLNDL*AQINSSVVLIV
Trigger: CACAATTAAGACCACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGGGGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
3UTR CAA 72 bp TATGATACTACAATAGTGGACACACGTCATTGTGCATaGGTCAAAACCCATAAAATACACAACACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: YDTTIVDTRHCA*VKTHKIHNTKS
Trigger: ACTCTTGGTGTTGTGTATTTTATGGGTTTTGACCAATGCACAATGACGTGTGTCCACTATTGTAGTATCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCTCTATATTCAAAGATaGCATCTAGGTCACCACACT +
Preference number: 4 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCLYIQR*HLGHHT
Trigger: AGTGTGGTGACCTAGATGTCATCTTTGAATATAGAG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCTTGGGAACAGAAAATaGAGTATAGGTGATTATTGG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLGNRK*SIGDYW
Trigger: CCAATAATCACCTATACTTCATTTTCTGTTCCCAAG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGATTCAGACAGATTACTaGCATTCTATGAATATGGCC +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVIQTDY*HSMNMA
Trigger: GGCCATATTCATAGAATGTCAGTAATCTGTCTGAAT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR TCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGAAGAAAATGATTACATaGGTGAGGAAAGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVKKMIT*VRKVTW
Trigger: CCAAGTGACTTTCCTCACTCATGTAATCATTTTCTT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATTTGTGTCTAGACTTTaGCAAGAAAATAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTFVSRL*QENKGV
Trigger: AACTCCCTTATTTTCTTGGCAAAGTCTAGACACAAA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR GCA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACCATCTACTTGTTCATaGAACATATACATTAGCATG +
Preference number: 4 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTPSTCS*NIYISM
Trigger: CATGCTAATGTATATGTTGCATGAACAAGTAGATGG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGTCAATTAAATCAAATTaGTGGCTATCAGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKSIKSN*WLSEKH
Trigger: GTGCTTCTCTGATAGCCACCAATTTGATTTAATTGA...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGATGTTTCTCCTTAATTaGGATACCGAGGACTCAAAA +
Preference number: 4 (lower is better)
Translates to: PYPELKLNDLLAQINSSVMFLLN*DTEDSK
Trigger: TTTTGAGTCCTCGGTATCCCAATTAAGGAGAAACAT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CCA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGGCTGCATTCATATGGTaGCATAATAAAAGACTGTAT +
Preference number: 4 (lower is better)
Translates to: QCCFNVKSPYEILIISWKAAFIW*HNKRLY
Trigger: ATACAGTCTTTTATTATGCCACCATATGAATGCAGC...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp GTTCTGAGCAGGACATTCCAGTCAAACAGATACGTTTaGAGAGCTGTGTTATTAGAGTATTTTAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: VLSRTFQSNRYV*RAVLLEYFKMF
Trigger: AAACATTTTAAAATACTCTAATAACACAGCTCTCAAAACGTATCTGTTTGACTGGAATGTCCTGCTCAGAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
3UTR CAA 72 bp TCCTCAGAGACAGAACAGCTAAAGACCAACTATAACTaGTATTCAGACAGATTACTGACATTCTATGAATAT +
Preference number: 4 (lower is better)
Translates to: SSETEQLKTNYN*YSDRLLTFYEY
Trigger: ATATTCATAGAATGTCAGTAATCTGTCTGAATACAAGTTATAGTTGGTCTTTAGCTGTTCTGTCTCTGAGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS GCA 90 bp ATGGCTTCAGGAGTGATGTCAGTCGCCATGGTCGGACGAGGGGGCTaGCCGACGGCCGCCCAGGTTCGGGAAACCGGCGCCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: MASGVMSVAMVGRGG*PTAAQVRETGAEPG
Trigger: GCCGGGCTCGGCGCCGGTTTCCCGAACCTGGGCGGCCGTCGGGCAGCCCCCTCGTCCGACCATGGCGACTGACATCACTCCTGAAGCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636133.1
ENST00000683842.1
CDS TCA 90 bp TCTGTGGATTGGCGCCTGAGGCTTTGGACCACACTGGACTCTTGGTaGGATGTGCCGTGGTGTTTGGCATCCCCTCTTTCACATGGGGAC +
Preference number: 5 (lower is better)
Translates to: SVDWRLRLWTTLDSW*DVPWCLASPLSHGD
Trigger: GTCCCCATGTGAAAGAGGGGATGCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS GCA 90 bp AGGTCACCACACTTTGAGATGGGCTCTGAGACCCCGGATGGCACCTaGAAATTGGTCCTGTCCTGTTCCTCTGGACTCCACATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RSPHFEMGSETPDGT*KLVLSCSSGLHMEE
Trigger: CTCCTCCATGTGGAGTCCAGAGGAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCTCAAAGTGTGGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568344.5
ENST00000683842.1
CDS-3UTR CAA 90 bp ACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTTACCAGGCGATGGCACCTGCAAATaGGTCCTGTCCTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TGLGPLCMFVLPLCFLPGDGTCK*VLSCSF
Trigger: GAAGGAACAGGACAGGACCAATTTGCAGGTGCCATC...GCCTGGTAAGAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp ACGGGGTTGGGCCCTCTCTGTATGTTCGTCCTGCCCCTGTGTTTCTTACCAGGCCAGCACTACATGAACTaGCCAGGAGTTGACACCACT +
Preference number: 5 (lower is better)
Translates to: TGLGPLCMFVLPLCFLPGQHYMN*PGVDTT
Trigger: AGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTG...GCCTGGTAAGAAACACAGGGGCAGGACGAACATACAGAGAGGGCCCAACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCGACCACACTGGACTCTaGGTGAGATGTGCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LIISTDNRPVVALYESPTDHTGL*VRCAVV
Trigger: CACCACGGCACATCTCACCAAGAGTCCAGTGTGGTC...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS TCA 90 bp AGATGTGCCGTGGTGTTTGGCATCCCCTCTTTCACATGGGGACTGTaGGTGAGCAGGGATGTGGTCATCTTCACCGTAGGAGAGATTCTC +
Preference number: 5 (lower is better)
Translates to: RCAVVFGIPSFTWGL*VSRDVVIFTVGEIL
Trigger: GAGAATCTCTCCTACGGTGAAGATGACCACATCCCTGCTCACTCACAGTCCCCATGTGAAAGAGGGGATGCCAAACACCACGGCACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS-3UTR CAA 90 bp TCAGGTGCTCGGTTAACAGCGAGGTTTCGGAAATGGCTGCCTTTGATCATTTCCTCTCTGGGCTCCAGCTaGGCAAAGGTGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SGARLTARFRKWLPLIISSLGSS*AKVTFS
Trigger: GGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGA...GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCAACAGCTTGGGCCACTGGGACATaGTGGAACATGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: FPQIIAPLWHCTRAPPTAWATGT*WNMSPL
Trigger: CAAAGGACTCATGTTCCACAATGTCCCAGTGGCCCA...AGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TCAGGTGCTCGGTTAACAGCGAGGTTTCGGAAATGGCTGCCTTTGATCATTTCCCTAGGTCACCACACTTaGAGATGGGCTCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: SGARLTARFRKWLPLIISLGHHT*RWALRP
Trigger: GGGTCTCAGAGCCCATCTCAAAGTGTGGTGACCTAG...GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS TCA 90 bp TCTGAACATCCTGAGACGCCATGGCCAACACCATGGCCAGCTATCTaGTGTCTACAGTGTCCAGTTGTTCAGTTCCTTCAGTGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SEHPETPWPTPWPAI*CLQCPVVQFLQCSG
Trigger: TCCAGAGCACTGAAGGAACTGAACAACTGGACACTGTAGACATCAGATAGCTGGCCATGGTGTTGGCCATGGCGTCTCAGGATGTTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS-3UTR CAA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LIISTDNRPVVALYESPTETLKP*PGHLVS
Trigger: TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTC...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAATCATCACTGGCCCAATaGGGCCACTGGGACATTGTG +
Preference number: 5 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQSSLAQ*GHWDIV
Trigger: CACAATGTCCCAGTGGCCCAATTGGGCCAGTGATGA...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGCTGCCCTCTGTGGATaGGCGCCTGAGGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRAALCG*APEALD
Trigger: GTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS TCA 90 bp CTGAACGGAAACTCTGGGACCGGGACACGGAAATCTCAAATTGTTTaGTCACCTCCTCGTCACTGTCAGAAGATGTGGACAGCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: LNGNSGTGTRKSQIV*SPPRHCQKMWTALR
Trigger: ACGAAGAGCTGTCCACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGTCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMSLKTG*GPLCMF
Trigger: GAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACAGATCTGCTGGCCTTaGGTTTCCTTCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQQICWP*VSFISS
Trigger: GGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAACTCAGAATAACGCCGTaGGCTGGCTCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQLRITP*AGSIQI
Trigger: GATTTGGATGGAGCCAGCCAACGGCGTTATTCTGAG...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCGGCTCACTGCAGCCTaGACCTCACAGGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMRLTAA*TSQVQA
Trigger: TGCTTGAACCTGTGAGGTCAAGGCTGCAGTGAGCCG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACAACACTGGGAGAGGATaGGGGTGGCTTCCACCTTAC +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHNTGRG*GWLPPY
Trigger: GTAAGGTGGAAGCCACCCCAATCCTCTCCCAGTGTT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS GCA 90 bp GTCAACAACGAACGGCTGAATTTTGGTTTCTGCTCCAATCCTGTCTaGTTTCCTTTCTCAGATGTCACTGAACGGAAACTCTGGGACCGG +
Preference number: 5 (lower is better)
Translates to: VNNERLNFGFCSNPV*FPFSDVTERKLWDR
Trigger: CCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCTAGGTCACCACACTTaGAGATGGGCTCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMLGHHT*RWALRP
Trigger: GGGTCTCAGAGCCCATCTCAAAGTGTGGTGACCTAG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSSLKTG*GPLCMF
Trigger: GAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTCAGATCTGCTGGCCTTaGGTTTCCTTCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSQICWP*VSFISS
Trigger: GGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTG...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQETLKP*PGHLVS
Trigger: TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTC...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAAGCACATGTGGTAACTaGCGGTCATCACTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSSTCGN*RSSLAQ
Trigger: TTGGGCCAGTGATGACCGCAAGTTACCACATGTGCT...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACAGCACATGTGGTAACTaGCGGTCATCACTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHSTCGN*RSSLAQ
Trigger: TTGGGCCAGTGATGACCGCAAGTTACCACATGTGCT...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCAGGTGCTCGGTTAACAGCGAGGTTTCGGAAATGGCTGCCTTTGATCATTTCCGCTGTCAAAGCCATGTaGAAGGCCACTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: SGARLTARFRKWLPLIISAVKAM*KATSLL
Trigger: AAGCAAAGAAGTGGCCTTCAACATGGCTTTGACAGC...GGAAATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCGAGCACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp CAAATGCAGGTTAGCAAACCTAGGATTCCAGCAAAGTGTGCCATCTGCAGATCTGATGTGCCGTGGTGTTaGGCATCCCCTCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: QMQVSKPRIPAKCAICRSDVPWC*ASPLSH
Trigger: ATGTGAAAGAGGGGATGCCAAACACCACGGCACATC...AGATCTGCAGATGGCACACTTTGCTGGAATCCTAGGTTTGCTAACCTGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATTGGCGCCTGAGGCTTaGGACCACACTGGACTCTTG +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSLAPEA*DHTGLL
Trigger: CAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCTCAGATACAAATCATaGGCCAGGCCTCCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHLRYKS*ARPPPS
Trigger: TGAAGGGGGAGGCCTGGCCAATGATTTGTATCTGAG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS GCA 90 bp CCATCTTCTCCGTGTGTCAACAACGAACGGCTGAATTTTGGTTTCTaGTCCAATCCTGTCTGCTTTCCTTTCTCAGATGTCACTGAACGG +
Preference number: 5 (lower is better)
Translates to: PSSPCVNNERLNFGF*SNPVCFPFSDVTER
Trigger: CCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 90 bp AATCCTGTCTGCTTTCCTTTCTCAGATGTCACTGAACGGAAACTCTaGGACCGGGACACGGAAATCTCAAATTGTTTGATCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: NPVCFPFSDVTERKL*DRDTEISNCLITSS
Trigger: CGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCGCCCCGTTGTGGCATaGTACGAGAGCCCCACCAAC +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVRPVVA*YESPTN
Trigger: GTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCACAGATAATCGCCCCGTaGTGGCATTGTACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSQIIAP*WHCTRA
Trigger: GGCTCTCGTACAATGCCACAACGGGGCGATTATCTG...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGATGTGCCGTGGTGTTaGGCATCCCCTCTTTCACAT +
Preference number: 5 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVDVPWC*ASPLSH
Trigger: ATGTGAAAGAGGGGATGCCAAACACCACGGCACATC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGCTGCCCTCTGTGGATaGGCGCCTGAGGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVAALCG*APEALD
Trigger: GTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS TCA 90 bp TGGTTTCTGCTCCAATCCTGTCTGCTTTCCTTTCTCAGATGTCACTaGACGGAAACTCTGGGACCGGGACACGGAAATCTCAAATTGTTT +
Preference number: 5 (lower is better)
Translates to: WFLLQSCLLSFLRCH*TETLGPGHGNLKLF
Trigger: AAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS TCA 90 bp CAGATACTTCTGTGCCATCTTCTCCGTGTGTCAACAACGAACGGCTaGATTTTGGTTTCTGCTCCAATCCTGTCTGCTTTCCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QILLCHLLRVSTTNG*ILVSAPILSAFLSQ
Trigger: CTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGATGGCACAGAAGTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 90 bp TTCTGTGCCATCTTCTCCGTGTGTCAACAACGAACGGCTGAATTTTaGTTTCTGCTCCAATCCTGTCTGCTTTCCTTTCTCAGATGTCAC +
Preference number: 5 (lower is better)
Translates to: FCAIFSVCQQRTAEF*FLLQSCLLSFLRCH
Trigger: GTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGATGGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAGATGGCACCTGCAAATaGGTCCTGTCCTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSDGTCK*VLSCSF
Trigger: GAAGGAACAGGACAGGACCAATTTGCAGGTGCCATC...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430451.3
ENST00000555409.1
CDS-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCGCCCCGTTGTGGCATaGTACGAGAGCCCCACCAAC +
Preference number: 5 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCRPVVA*YESPTN
Trigger: GTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACAGATCTGCTGGCCTTaGGTTTCCTTCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRQICWP*VSFISS
Trigger: GGAGGAGATGAAGGAAACCAAAGGCCAGCAGATCTG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGAAACCCTGAAACCCTaGCCAGGACACTTAGTGTCA +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMETLKP*PGHLVS
Trigger: TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTTGGGCCACTGGGACATaGTGGAACATGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIWATGT*WNMSPL
Trigger: CAAAGGACTCATGTTCCACAATGTCCCAGTGGCCCA...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGTCATCACTGGCCCAATaGGGCCACTGGGACATTGTG +
Preference number: 5 (lower is better)
Translates to: TLFPLTNMVMILFLISCRSSLAQ*GHWDIV
Trigger: CACAATGTCCCAGTGGCCCAATTGGGCCAGTGATGA...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCTCTGGGCTCCAGCTaGGCAAAGGTGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSLGSS*AKVTFS
Trigger: GGAGAAGGTCACCTTTGCCAAGCTGGAGCCCAGAGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGCAGATAATCGCCCCGTaGTGGCATTGTACGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QCCFNVKSPYEILIISWKQIIAP*WHCTRA
Trigger: GGCTCTCGTACAATGCCACAACGGGGCGATTATCTG...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTGATCATTTCCACAGATAATCGCCCCGTTGTGGCATTGTACGAGAGCCCCACCTTCTGTAAGAACTTATaGGGTGAGAAAGACAGCATA +
Preference number: 5 (lower is better)
Translates to: LIISTDNRPVVALYESPTFCKNL*GEKDSI
Trigger: TATGCTGTCTTTCTCACCCAATAAGTTCTTACAGAA...GGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGGAAATGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGGTCTACAGTGTCCAGTaGTTCAGTTCCTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMVYSVQ*FSSFSA
Trigger: AGCACTGAAGGAACTGAACAACTGGACACTGTAGAC...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTCAGAATAACGCCGTaGGCTGGCTCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLRITP*AGSIQI
Trigger: GATTTGGATGGAGCCAGCCAACGGCGTTATTCTGAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGGACCACACTGGACTCTaGGTGAGATGTGCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVDHTGL*VRCAVV
Trigger: CACCACGGCACATCTCACCAAGAGTCCAGTGTGGTC...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTTGGCGCCTGAGGCTTaGGACCACACTGGACTCTTG +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLAPEA*DHTGLL
Trigger: CAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGAGTGGACACACGTCATaGTGCATTGGTCAAAACCCA +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMSGHTS*CIGQNP
Trigger: TGGGTTTTGACCAATGCACAATGACGTGTGTCCACT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTGAAACCCTTGCCAGGACACTTAGTGTCAGTAGACAGCAACACAGGTAACCAAAAAGCTTCCTTTCTCTaGGCAGGAGTGGTAAATGTA +
Preference number: 5 (lower is better)
Translates to: LKPLPGHLVSVDSNTGNQKASFL*AGVVNV
Trigger: TACATTTACCACTCCTGCCAAGAGAAAGGAAGCTTT...TTGGTTACCTGTGTTGCTGTCTACTGACACTAAGTGTCCTGGCAAGGGTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCTAGGTCACCACACTTaGAGATGGGCTCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLGHHT*RWALRP
Trigger: GGGTCTCAGAGCCCATCTCAAAGTGTGGTGACCTAG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTTCCCTGAAGACGGGGTaGGGCCCTCTCTGTATGTTC +
Preference number: 5 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCSLKTG*GPLCMF
Trigger: GAACATACAGAGAGGGCCCAACCCCGTCTTCAGGGA...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGGAATTTGCATCCTCTaGACTCCAATCATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSGICIL*TPIIVL
Trigger: CAAGACAATGATTGGAGTCAAGAGGATGCAAATTCC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGGAATTTGCATCCTCTaGACTCCAATCATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHGICIL*TPIIVL
Trigger: CAAGACAATGATTGGAGTCAAGAGGATGCAAATTCC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGCTGTCAAAGCCATGTaGAAGGCCACTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRAVKAM*KATSLL
Trigger: AAGCAAAGAAGTGGCCTTCAACATGGCTTTGACAGC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp GAGACCCTCCACTGCTTATATTACTTCTTGGCTCCAGAACCAGAGTCACTTTCAGAAATCTCAAATTGTTaGATCACCTCCTCGTCACTG +
Preference number: 5 (lower is better)
Translates to: ETLHCLYYFLAPEPESLSEISNC*ITSSSL
Trigger: CAGTGACGAGGAGGTGATCAAACAATTTGAGATTTC...TGAAAGTGACTCTGGTTCTGGAGCCAAGAAGTAATATAAGCAGTGGAGGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555409.1
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACGAAATCTCAAATTGTTaGATCACCTCCTCGTCACTG +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHEISNC*ITSSSL
Trigger: CAGTGACGAGGAGGTGATCAAACAATTTGAGATTTC...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGCACGGAAATCTCAAATaGTTTGATCACCTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMHGNLK*FDHLLV
Trigger: GACGAGGAGGTGATCAAACAATTTGAGATTTCCGTG...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACAGATGGCACCTGCAAATaGGTCCTGTCCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTDGTCK*VLSCSS
Trigger: AGAGGAACAGGACAGGACCAATTTGCAGGTGCCATC...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTTGGTTCTACCACAGTaGGACTCTATTAAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHLVLPQ*DSIKAQ
Trigger: TTGAGCCTTAATAGAGTCCAACTGTGGTAGAACCAA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCAAACCATCAAGGATTaGTACTCCCTCCAAACTAAG +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHQTIKD*YSLQTK
Trigger: CTTAGTTTGGAGGGAGTACAAATCCTTGATGGTTTG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGTACATGCATCCTATTaGGTGAGTAGCACCAACATA +
Preference number: 5 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVVHASY*VSSTNI
Trigger: TATGTTGGTGCTACTCACCAAATAGGATGCATGTAC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTTCATGAGCCTATCCTaGTTACAGTATCTGAACGTT +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHFMSLS*LQYLNV
Trigger: AACGTTCAGATACTGTAACAAGGATAGGCTCATGAA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGACAAGGTTTGAATCACTaGAGAACAAGTGGATGCGCT +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRQGLNH*RTSGCA
Trigger: AGCGCATCCACTTGTTCTCAAGTGATTCAAACCTTG...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGGGACACTCCCAATGTaGACCTTTACCTATTTCATA +
Preference number: 5 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVGTLPM*TFTYFI
Trigger: TATGAAATAGGTAAAGGTCAACATTGGGAGTGTCCC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AAGAAAGGTCTGCATTCAACTCAAAGGTTGGCGAACCTGCTGAAAACATGGATTCATTCAACTCAAAGGTaGGCGAACCTGCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: KKGLHSTQRLANLLKTWIHSTQR*ANLLKT
Trigger: TGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATG...AATCCATGTTTTCAGCAGGTTCGCCAACCTTTGAGTTGAATGCAGACCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGAGTGAGGAAAGTCACTaGGGAGGGGAGAGATGGACA +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSEESH*GGERWT
Trigger: TGTCCATCTCTCCCCTCCCAAGTGACTTTCCTCACT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCAGCACTACATGAACTaGCCAGGAGTTGACACCACT +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVQHYMN*PGVDTT
Trigger: AGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACCTTCAGTGCTCTGGATaGAATGTGAACTATAGAATA +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHLQCSG*NVNYRI
Trigger: TATTCTATAGTTCACATTCAATCCAGAGCACTGAAG...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGCAGAAGAGCTGCACATaGAGCGCAGGGATTAAATGT +
Preference number: 5 (lower is better)
Translates to: QCCFNVKSPYEILIISWKQKSCT*SAGIKC
Trigger: ACATTTAATCCCTGCGCTCAATGTGCAGCTCTTCTG...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGAGACAAGGAGAGGCCTaGTTTGTGATCGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: QCCFNVKSPYEILIISWKRQGEA*FVIDQE
Trigger: CTCTTGATCGATCACAAACAAGGCCTCTCCTTGTCT...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTAGTAGTCAAACTGCCATaGTCACCAACTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVVVKLP*SPTLLI
Trigger: TATCAAAAGAGTTGGTGACAATGGCAGTTTGACTAC...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTCTATGACACCCCCATCCCCACCAATTTCCCATATAATGCAACCAAGACTCACTCAAACAGATACGTTTaGAGAGCTGTGTTATTAGAG +
Preference number: 5 (lower is better)
Translates to: FYDTPIPTNFPYNATKTHSNRYV*RAVLLE
Trigger: CTCTAATAACACAGCTCTCAAAACGTATCTGTTTGA...GTGAGTCTTGGTTGCATTATATGGGAAATTGGTGGGGATGGGGGTGTCATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp ACTCTTTTCCCTCTCACAAACATGGTGATGATTCTTTTCCTGATTTCATGCAGGCTGGTTACACTGAACTaGAAGTGGTTTGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: TLFPLTNMVMILFLISCRLVTLN*KWFAPE
Trigger: TTCAGGAGCAAACCACTTCAAGTTCAGTGTAACCAG...CCTGCATGAAATCAGGAAAAGAATCATCACCATGTTTGTGAGAGGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAAGGGTAGCAATGCCTTaGACTATTAAAACACAGAGC +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRRVAMP*TIKTQS
Trigger: GCTCTGTGTTTTAATAGTCAAAGGCATTGCTACCCT...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CTCTTTCTCTGGCGGCTACTGTTACCAGTTCACTCTTTCAAAAAGCAAAGGGTACCAACACCCATCTACTaGTTCATGCAACATATACAT +
Preference number: 5 (lower is better)
Translates to: LFLWRLLLPVHSFKKQRVPTPIY*FMQHIH
Trigger: ATGTATATGTTGCATGAACAAGTAGATGGGTGTTGG...TACCCTTTGCTTTTTGAAAGAGTGAACTGGTAACAGTAGCCGCCAGAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGATTTCCATCTATCACCTaGTCATATGTATGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRFPSIT*SYVWPC
Trigger: ACAGGGCCATACATATGACAAGGTGATAGATGGAAA...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCAGCACTACATGAACTaGCCAGGAGTTGACACCACT +
Preference number: 5 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCQHYMN*PGVDTT
Trigger: AGTGGTGTCAACTCCTGGCAAGTTCATGTAGTGCTG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CAGTGCTGCTTCAATGTCAAATCTCCCTATGAGATATTAATCATTAGCTGGAAGGGTAAGCAGGGCTCTTaGTTTAGATTGTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: QCCFNVKSPYEILIISWKGKQGS*FRLSPL
Trigger: AAGAGGTGACAATCTAAACAAAGAGCCCTGCTTACC...CTTCCAGCTAATGATTAATATCTCATAGGGAGATTTGACATTGAAGCAGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TCTCTCTCTCTTGAACCTCTGGACCACATACGAATTCTCTACTGGAAAACTAGAGGCAACACGAAAAACTaGCTTTCAGTCAGAATTTTC +
Preference number: 5 (lower is better)
Translates to: SLSLEPLDHIRILYWKTRGNTKN*LSVRIF
Trigger: GAAAATTCTGACTGAAAGCAAGTTTTTCGTGTTGCC...TCTAGTTTTCCAGTAGAGAATTCGTATGTGGTCCAGAGGTTCAAGAGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AGCCTTCTCATCATCCTCAAGGTAAAACTGGTAACACTGTCACTCAAAGGCATGACACGTCATTGTGCATaGGTCAAAACCCATAAAATA +
Preference number: 5 (lower is better)
Translates to: SLLIILKVKLVTLSLKGMTRHCA*VKTHKI
Trigger: TATTTTATGGGTTTTGACCAATGCACAATGACGTGT...CATGCCTTTGAGTGACAGTGTTACCAGTTTTACCTTGAGGATGATGAGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCAACAGAGTCACTAAATTaGGGATCACGTCTTCATAAC +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSTESLN*GSRLHN
Trigger: GTTATGAAGACGTGATCCCAAATTTAGTGACTCTGT...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp TTAGTGGAATCTGTTTTTGAAACCCTGAAACCCTTGCCAGGACACTTAGTGTCATTCTGTAAGAACTTATaGGGTGAGAAAGACAGCATA +
Preference number: 5 (lower is better)
Translates to: LVESVFETLKPLPGHLVSFCKNL*GEKDSI
Trigger: TATGCTGTCTTTCTCACCCAATAAGTTCTTACAGAA...TGACACTAAGTGTCCTGGCAAGGGTTTCAGGGTTTCAAAAACAGATTCCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430451.3
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTGTCTACAGTGTCCAGTaGTTCAGTTCCTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCVYSVQ*FSSFSA
Trigger: AGCACTGAAGGAACTGAACAACTGGACACTGTAGAC...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCACGGAAATCTCAAATaGTTTGATCACCTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVHGNLK*FDHLLV
Trigger: GACGAGGAGGTGATCAAACAATTTGAGATTTCCGTG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACATTGTCACCAACTCTTTaGATAAAGGCGACAAGATGC +
Preference number: 5 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLSPTL*IKATRC
Trigger: GCATCTTGTCGCCTTTATCAAAAGAGTTGGTGACAA...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTCACGGGGAAGAAGGTaGTGTTTGGAGTATATGAGA +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVSRGRR*CLEYMR
Trigger: TCTCATATACTCCAAACACAACCTTCTTCCCCGTGA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGTGGCACATGCCCAGATaGCAAGTAGTGACTAATATA +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVWHMPR*QVVTNI
Trigger: TATATTAGTCACTACTTGCAATCTGGGCATGTGCCA...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCAATGTTTCACCTTCCAATACTAGTAACAAGGAACTCTACTGTTTATGGCACACTAACAAAACTGGCCTaGAACAATCAATTTGCCAAG +
Preference number: 5 (lower is better)
Translates to: PMFHLPILVTRNSTVYGTLTKLA*NNQFAK
Trigger: CTTGGCAAATTGATTGTTCAAGGCCAGTTTTGTTAG...TGTGCCATAAACAGTAGAGTTCCTTGTTACTAGTATTGGAAGGTGAAACATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGCTTCAGTGCTCTGGATaGAATGTGAACTATAGAATA +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVLQCSG*NVNYRI
Trigger: TATTCTATAGTTCACATTCAATCCAGAGCACTGAAG...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555409.1
ENST00000568344.5
CDS-3UTR CAA 90 bp CCATACCCTGAACTAAAACTCAATGATCTATTGGCACAAATTAACTCATCAGTGACATGGATTTGCAGTTaGTTACATGATCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PYPELKLNDLLAQINSSVTWICS*LHDQCL
Trigger: CAAACACTGATCATGTAACAAACTGCAAATCCATGT...CACTGATGAGTTAATTTGTGCCAATAGATCATTGAGTTTTAGTTCAGGGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS-3UTR CAA 90 bp AGTGGTCTTAATTGTGGTATAATATTTTCCATACGGACACTTCACTGTGTATGTCAGGTATTTAACTCATaGCTCAACAAAAGACACTAC +
Preference number: 5 (lower is better)
Translates to: SGLNCGIIFSIRTLHCVCQVFNS*LNKRHY
Trigger: GTAGTGTCTTTTGTTGAGCAATGAGTTAAATACCTG...ACATACACAGTGAAGTGTCCGTATGGAAAATATTATACCACAATTAAGACCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568344.5
CDS GCA 72 bp GGAGTGATGTCAGTCGCCATGGTCGGACGAGGGGGCTaGCCGACGGCCGCCCAGGTTCGGGAAACCGGCGCC +
Preference number: 6 (lower is better)
Translates to: GVMSVAMVGRGG*PTAAQVRETGA
Trigger: GGCGCCGGTTTCCCGAACCTGGGCGGCCGTCGGGCAGCCCCCTCGTCCGACCATGGCGACTGACATCACTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636133.1
ENST00000683842.1
CDS CAA 90 bp GCCCTCTGTGGATTGGCGCCTGAGGCTTTGGACCACACTGGACTCTaGGTGAGATGTGCCGTGGTGTTTGGCATCCCCTCTTTCACATGG +
Preference number: 6 (lower is better)
Translates to: ALCGLAPEALDHTGL*VRCAVVFGIPSFTW
Trigger: CCATGTGAAAGAGGGGATGCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 90 bp TGTCTCCATCTCCAAGCTGCCCTCTGTGGATTGGCGCCTGAGGCTTaGGACCACACTGGACTCTTGGTGAGATGTGCCGTGGTGTTTGGC +
Preference number: 6 (lower is better)
Translates to: CLHLQAALCGLAPEA*DHTGLLVRCAVVFG
Trigger: GCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp AGATGGGCTCTGAGACCCCGGATGGCACCTGCAAATTaGTCCTGTCCTGTTCCTCTGGACTCCACATGGAGG +
Preference number: 6 (lower is better)
Translates to: RWALRPRMAPAN*SCPVPLDSTWR
Trigger: CCTCCATGTGGAGTCCAGAGGAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568344.5
ENST00000683842.1
CDS CAA 72 bp GGATTGGCGCCTGAGGCTTTGGACCACACTGGACTCTaGGTGAGATGTGCCGTGGTGTTTGGCATCCCCTCT +
Preference number: 6 (lower is better)
Translates to: GLAPEALDHTGL*VRCAVVFGIPS
Trigger: AGAGGGGATGCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 72 bp GAGATGGGCTCTGAGACCCCGGATGGCACCTGCAAATaGGTCCTGTCCTGTTCCTCTGGACTCCACATGGAG +
Preference number: 6 (lower is better)
Translates to: EMGSETPDGTCK*VLSCSSGLHME
Trigger: CTCCATGTGGAGTCCAGAGGAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568344.5
ENST00000683842.1
CDS TCA 72 bp TGGCGCCTGAGGCTTTGGACCACACTGGACTCTTGGTaGGATGTGCCGTGGTGTTTGGCATCCCCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: WRLRLWTTLDSW*DVPWCLASPLS
Trigger: TGAAAGAGGGGATGCCAAACACCACGGCACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS TCA 72 bp TCTCCATCTCCAAGCTGCCCTCTGTGGATTGGCGCCTaGGGCTTTGGACCACACTGGACTCTTGGTGAGATG +
Preference number: 6 (lower is better)
Translates to: SPSPSCPLWIGA*GFGPHWTLGEM
Trigger: CATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS GCA 72 bp CACTTTGAGATGGGCTCTGAGACCCCGGATGGCACCTaGAAATTGGTCCTGTCCTGTTCCTCTGGACTCCAC +
Preference number: 6 (lower is better)
Translates to: HFEMGSETPDGT*KLVLSCSSGLH
Trigger: GTGGAGTCCAGAGGAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCTCAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568344.5
ENST00000683842.1
CDS CCA 72 bp GCGAAACCGCTCAACGCCATCTCCGTAGGCTCCAAGTaGGCCGTGCTCTTCATGTCACCCTCTGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: AKPLNAISVGSK*AVLFMSPSVLS
Trigger: AGACAAAACAGAGGGTGACATGAAGAGCACGGCCCACTTGGAGCCTACGGAGATGGCGTTGAGCGGTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554138.1
CDS GCA 72 bp CACTTTGAGATGGGCTCTGAGACCCCGGATGGCACCTaGAAATTGGTCCTGTCCTGTTCCTTCTGTGTAGGG +
Preference number: 6 (lower is better)
Translates to: HFEMGSETPDGT*KLVLSCSFCVG
Trigger: CCCTACACAGAAGGAACAGGACAGGACCAATTTGCAGGTGCCATCCGGGGTCTCAGAGCCCATCTCAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430451.3
ENST00000555409.1
CDS CAA 90 bp CCGGCTATTAAAAGCTGTCTCCATCTCCAAGCTGCCCTCTGTGGATaGGCGCCTGAGGCTTTGGACCACACTGGACTCTTGGTGAGATGT +
Preference number: 6 (lower is better)
Translates to: PAIKSCLHLQAALCG*APEALDHTGLLVRC
Trigger: ACATCTCACCAAGAGTCCAGTGTGGTCCAAAGCCTCAGGCGCCAATCCACAGAGGGCAGCTTGGAGATGGAGACAGCTTTTAATAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS TCA 72 bp CCTGAGACGCCATGGCCAACACCATGGCCAGCTATCTaGTGTCTACAGTGTCCAGTTGTTCAGTTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: PETPWPTPWPAI*CLQCPVVQFLQ
Trigger: CTGAAGGAACTGAACAACTGGACACTGTAGACATCAGATAGCTGGCCATGGTGTTGGCCATGGCGTCTCAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS CCA 72 bp GCACATGTGGTAACTTGCGGTCATCACTGGCCCAATTaGGCCACTGGGACATTGTGGAACATGAGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: AHVVTCGHHWPN*ATGTLWNMSPL
Trigger: CAAAGGACTCATGTTCCACAATGTCCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGTTACCACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS CAA 72 bp TCTTCCTCCGCAATAGAAGAAAGCACATGTGGTAACTaGCGGTCATCACTGGCCCAATTGGGCCACTGGGAC +
Preference number: 6 (lower is better)
Translates to: SSSAIEESTCGN*RSSLAQLGHWD
Trigger: GTCCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGTTACCACATGTGCTTTCTTCTATTGCGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS TCA 72 bp CTCCAATCCTGTCTGCTTTCCTTTCTCAGATGTCACTaGACGGAAACTCTGGGACCGGGACACGGAAATCTC +
Preference number: 6 (lower is better)
Translates to: LQSCLLSFLRCH*TETLGPGHGNL
Trigger: GAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 72 bp AGCACATGTGGTAACTTGCGGTCATCACTGGCCCAATaGGGCCACTGGGACATTGTGGAACATGAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: STCGNLRSSLAQ*GHWDIVEHESF
Trigger: AAAGGACTCATGTTCCACAATGTCCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGTTACCACATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS CAA 90 bp ACTGAACGGAAACTCTGGGACCGGGACACGGAAATCTCAAATTGTTaGATCACCTCCTCGTCACTGTCAGAAGATGTGGACAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: TERKLWDRDTEISNC*ITSSSLSEDVDSSS
Trigger: CGAAGAGCTGTCCACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp GCAAATTGGTCCTGTCCTGTTCCTCTGGACTCCACATaGAGGAGCTGTCAGTGGCATAGGAATCTTCAAATC +
Preference number: 6 (lower is better)
Translates to: ANWSCPVPLDST*RSCQWHRNLQI
Trigger: GATTTGAAGATTCCTATGCCACTGACAGCTCCTCCATGTGGAGTCCAGAGGAACAGGACAGGACCAATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568344.5
ENST00000683842.1
CDS CAA 72 bp ATCTTCACCGTAGGAGAGATTCTCAGAATAACGCCGTaGGCTGGCTCCATCCAAATCTTCGCAGGCAGATAC +
Preference number: 6 (lower is better)
Translates to: IFTVGEILRITP*AGSIQIFAGRY
Trigger: GTATCTGCCTGCGAAGATTTGGATGGAGCCAGCCAACGGCGTTATTCTGAGAATCTCTCCTACGGTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 90 bp ATAGAAGAAAGCACATGTGGTAACTTGCGGTCATCACTGGCCCAATaGGGCCACTGGGACATTGTGGAACATGAGTCCTTTGCATGTTGG +
Preference number: 6 (lower is better)
Translates to: IEESTCGNLRSSLAQ*GHWDIVEHESFACW
Trigger: CCAACATGCAAAGGACTCATGTTCCACAATGTCCCAGTGGCCCAATTGGGCCAGTGATGACCGCAAGTTACCACATGTGCTTTCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS CAA 90 bp AGTACCAGGGAGCTGGCTGTCAAAGCCATGTTGAAGGCCACTTCTTaGCTTTTCAAGGTGATGCTCTTCCTCCGCAATAGAAGAAAGCAC +
Preference number: 6 (lower is better)
Translates to: STRELAVKAMLKATS*LFKVMLFLRNRRKH
Trigger: GTGCTTTCTTCTATTGCGGAGGAAGAGCATCACCTTGAAAAGCAAAGAAGTGGCCTTCAACATGGCTTTGACAGCCAGCTCCCTGGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS TCA 72 bp AACTCTGGGACCGGGACACGGAAATCTCAAATTGTTTaGTCACCTCCTCGTCACTGTCAGAAGATGTGGACA +
Preference number: 6 (lower is better)
Translates to: NSGTGTRKSQIV*SPPRHCQKMWT
Trigger: TGTCCACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS TCA 72 bp CTGTGCCATCTTCTCCGTGTGTCAACAACGAACGGCTaGATTTTGGTTTCTGCTCCAATCCTGTCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LCHLLRVSTTNG*ILVSAPILSAF
Trigger: GAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGATGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 72 bp GAGCTGGCTGTCAAAGCCATGTTGAAGGCCACTTCTTaGCTTTTCAAGGTGATGCTCTTCCTCCGCAATAGA +
Preference number: 6 (lower is better)
Translates to: ELAVKAMLKATS*LFKVMLFLRNR
Trigger: TCTATTGCGGAGGAAGAGCATCACCTTGAAAAGCAAAGAAGTGGCCTTCAACATGGCTTTGACAGCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1
CDS CAA 72 bp AAACTCTGGGACCGGGACACGGAAATCTCAAATTGTTaGATCACCTCCTCGTCACTGTCAGAAGATGTGGAC +
Preference number: 6 (lower is better)
Translates to: KLWDRDTEISNC*ITSSSLSEDVD
Trigger: GTCCACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CAA 72 bp ACGGAAACTCTGGGACCGGGACACGGAAATCTCAAATaGTTTGATCACCTCCTCGTCACTGTCAGAAGATGT +
Preference number: 6 (lower is better)
Translates to: TETLGPGHGNLK*FDHLLVTVRRC
Trigger: ACATCTTCTGACAGTGACGAGGAGGTGATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS GCA 72 bp CCGTGTGTCAACAACGAACGGCTGAATTTTGGTTTCTaGTCCAATCCTGTCTGCTTTCCTTTCTCAGATGTC +
Preference number: 6 (lower is better)
Translates to: PCVNNERLNFGF*SNPVCFPFSDV
Trigger: GACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp CAGCACGTAGTAGGCTCTCAGCAGATTTCTGTTGAGTaGGTGAATGGATGTCTTTATAACTGGATGCCTGCA +
Preference number: 6 (lower is better)
Translates to: QHVVGSQQISVE*VNGCLYNWMPA
Trigger: TGCAGGCATCCAGTTATAAAGACATCCATTCACCCACTCAACAGAAATCTGCTGAGAGCCTACTACGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554138.1
CDS GCA 72 bp GAACGGCTGAATTTTGGTTTCTGCTCCAATCCTGTCTaGTTTCCTTTCTCAGATGTCACTGAACGGAAACTC +
Preference number: 6 (lower is better)
Translates to: ERLNFGFCSNPV*FPFSDVTERKL
Trigger: GAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp TGCTTTCCTTTCTCAGATGTCACTGAACGGAAACTCTaGGACCGGGACACGGAAATCTCAAATTGTTTGATC +
Preference number: 6 (lower is better)
Translates to: CFPFSDVTERKL*DRDTEISNCLI
Trigger: GATCAAACAATTTGAGATTTCCGTGTCCCGGTCCCAGAGTTTCCGTTCAGTGACATCTGAGAAAGGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp ATCTTCTCCGTGTGTCAACAACGAACGGCTGAATTTTaGTTTCTGCTCCAATCCTGTCTGCTTTCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: IFSVCQQRTAEF*FLLQSCLLSFL
Trigger: GAGAAAGGAAAGCAGACAGGATTGGAGCAGAAACCAAAATTCAGCCGTTCGTTGTTGACACACGGAGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000636133.1
ENST00000683842.1
CDS CCA 72 bp TCCTTTGCATGTTGGCTAAGGCTTGGGCTTGAATTTTaGGCAGAGTCCTGCAAATCACTATTACAACATGAG +
Preference number: 6 (lower is better)
Translates to: SFACWLRLGLEF*AESCKSLLQHE
Trigger: CTCATGTTGTAATAGTGATTTGCAGGACTCTGCCCAAAATTCAAGCCCAAGCCTTAGCCAACATGCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555409.1
ENST00000568344.5
ENST00000683842.1