RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT14 (Homo sapiens)

Ensembl gene IDs: ENSG00000143469

Ensembl transcript IDs: ENST00000367015.5, ENST00000399639.6, ENST00000537238.5, ENST00000637265.1, ENST00000637945.1

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTCTGAGGGTGTACATGACAGATGGGGAGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAATTCATCCAGCGGGGGTGTTCTTCTC +
Preference number: 1 (lower is better)
Translates to: ISEGVHDRWGEPLSS*YGGGCNSSSGGVLL
Trigger: GAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATGTACACCCTCAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 90 bp ATCTTCACTTCCAAGAAGCTGGCTTCTACTCCATTAGAATTGCAATaGCATTTGGGTACTGAAGCGGCCGTCCTATTTCAGGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: IFTSKKLASTPLELQ*HLGTEAAVLFQGSG
Trigger: CCCAGAACCCTGAAATAGGACGGCCGCTTCAGTACCCAAATGTCATTGCAATTCTAATGGAGTAGAAGCCAGCTTCTTGGAAGTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp CTTGCCATGAGTTGCCACCTGTCCTGTTATATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCAGAAGCTTCTGTTCTTGTGAGTCAT +
Preference number: 1 (lower is better)
Translates to: LAMSCHLSCYMLGCL*QLSLLPEASVLVSH
Trigger: ATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 90 bp ATTTGGGTACTGAAGCGGCCGTCCTATTTCAGGGTTCTGGGATACTaGTCCTTTATGGGCCTTTTCTCCTATTGGTGCTTATGGATTACT +
Preference number: 1 (lower is better)
Translates to: IWVLKRPSYFRVLGY*SFMGLFSYWCLWIT
Trigger: AGTAATCCATAAGCACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATCCCAGAACCCTGAAATAGGACGGCCGCTTCAGTACCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp TCTGCCAGTGGTAGTCTGGAATTGTGTGTTCTGGATAAGGCCTCATaGTATTTACCCAGCGCTTCATCTTCACTTTCAGAGGATGAACCA +
Preference number: 1 (lower is better)
Translates to: SASGSLELCVLDKAS*YLPSASSSLSEDEP
Trigger: TGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCACTGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR GCA 90 bp TTCCTTCACTTGGGCACTTGTTATATGAGCATCTTGGACTGTTGCTaGAGTGGGAAAATTCACATTTACTGTCCCCAATTTCTGAGGGTG +
Preference number: 1 (lower is better)
Translates to: FLHLGTCYMSILDCC*SGKIHIYCPQFLRV
Trigger: CACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR GCA 90 bp TGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTTGGACTGTTaGTGCAGTGGGAAAATTCACATTTACTGTCCCCAATTTCTGAGG +
Preference number: 1 (lower is better)
Translates to: CFLHLGTCYMSILDC*CSGKIHIYCPQFLR
Trigger: CCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 90 bp TTTACACCTGGGTTCCAATCCCAGTTCTACTACTTACTTACCGAATaGCCTTGGGAAAGTCTGCTTAACCTCTTCATGCTGCAGTTTCTT +
Preference number: 1 (lower is better)
Translates to: FTPGFQSQFYYLLTE*PWESLLNLFMLQFL
Trigger: AAGAAACTGCAGCATGAAGAGGTTAAGCAGACTTTCCCAAGGTCATTCGGTAAGTAAGTAGTAGAACTGGGATTGGAACCCAGGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp GATGTCTGTGACAGCTGTCACTGTTACCAGAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCACATCCAGTGTGCCATATTTAGCTTC +
Preference number: 1 (lower is better)
Translates to: DVCDSCHCYQKLLFL*VIVKSHIQCAIFSF
Trigger: GAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR CCA 90 bp GGCAAATGCAACATGCATAGCATGGGTTTTAGAGTAATTTACACCTaGGTTCCAATCCCAGTTCTACTACTTACTTACCGAATGACCTTG +
Preference number: 1 (lower is better)
Translates to: GKCNMHSMGFRVIYT*VPIPVLLLTYRMTL
Trigger: CAAGGTCATTCGGTAAGTAAGTAGTAGAACTGGGATTGGAACCCAGGTGTAAATTACTCTAAAACCCATGCTATGCATGTTGCATTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp TTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATaGGCATCTTGGACTGTTGCTGCAGTGGGAAAATTCACATTTACT +
Preference number: 1 (lower is better)
Translates to: FYFMTCASFTWALVI*ASWTVAAVGKFTFT
Trigger: AGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 90 bp CTTTCTATTCATAGCTGGAGAGGGATCTTGAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCATCAAAAATTTACATCTTCCCATAGC +
Preference number: 1 (lower is better)
Translates to: LSIHSWRGILKNTWW*PLFLLHQKFTSSHS
Trigger: GCTATGGGAAGATGTAAATTTTTGATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp GGCCTCATGATATTTACCCAGCGCTTCATCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTCCATGTAGGAATTATAAATTTTATC +
Preference number: 1 (lower is better)
Translates to: GLMIFTQRFIFTFRG*TMLIFVHVGIINFI
Trigger: GATAAAATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR GCA 90 bp GCAAGAATGCAAACATGCCAGCACCTATGGCTGCTACTACACATTTaGTCAAAGGTCAGTCTTATTTCATTTAGGATACTGATAAAGAAA +
Preference number: 1 (lower is better)
Translates to: ARMQTCQHLWLLLHI*SKVSLISFRILIKK
Trigger: TTTCTTTATCAGTATCCTAAATGAAATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAGCCATAGGTGCTGGCATGTTTGCATTCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp GCAAATGAATTTGTGTCCTTTCTATTCATAGCTGGAGAGGGATCTTaGAAAATACTTGGTGGTGACCACTGTTCTTACTCCATCAAAAAT +
Preference number: 1 (lower is better)
Translates to: ANEFVSFLFIAGEGS*KILGGDHCSYSIKN
Trigger: ATTTTTGATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAGGACACAAATTCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR CCA 90 bp TATGCTTCAATATTAAGAGAGTCGATGTATGTGCAACAGCTACTCTaGTCTCCCCTCACACAACAAATGTCACATAATTACAGAATACTA +
Preference number: 1 (lower is better)
Translates to: YASILRESMYVQQLL*SPLTQQMSHNYRIL
Trigger: TAGTATTCTGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACATACATCGACTCTCTTAATATTGAAGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp ATTCACTTGATAAGTGAAATGAAAATGATGATGGTATCAAGCAAATaGTTTAACAAACAGCCCTGGGCATTTTCGCTAGGTTGGATGAAA +
Preference number: 1 (lower is better)
Translates to: IHLISEMKMMMVSSK*FNKQPWAFSLGWMK
Trigger: TTTCATCCAACCTAGCGAAAATGCCCAGGGCTGTTTGTTAAATCATTTGCTTGATACCATCATCATTTTCATTTCACTTATCAAGTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp TGGAAAGACTATGATATCATTCAGTATCCCCACACATCTTCATATTaGCAAACACTCTCAATTCTTTTACCTCTTTCTCCTATTGGTACT +
Preference number: 1 (lower is better)
Translates to: WKDYDIIQYPHTSSY*QTLSILLPLSPIGT
Trigger: AGTACCAATAGGAGAAAGAGGTAAAAGAATTGAGAGTGTTTGTCAATATGAAGATGTGTGGGGATACTGAATGATATCATAGTCTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 90 bp ATTATTTTACATTTTGTTCTTGGAAAGAACGTGTGTCCTCAAGTTTaGTGGGAGTCTAACATGTATTTGTTCTTTAAGACCCAACTCAGG +
Preference number: 1 (lower is better)
Translates to: IILHFVLGKNVCPQV*WESNMYLFFKTQLR
Trigger: CCTGAGTTGGGTCTTAAAGAACAAATACATGTTAGACTCCCATCAAACTTGAGGACACACGTTCTTTCCAAGAACAAAATGTAAAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR CCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQSFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACGGCTCACTGCAGCCTTaGCTTGCCAGGCTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYGSLQP*LARLQR
Trigger: TCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTGAGCC...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR GCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR GCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGCTATCTTGGCTCACTaGAGCCTTGACTTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITAILAH*SLDLPG
Trigger: GCCTGGCAAGTCAAGGCTGCAGTGAGCCAAGATAGC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCGCCAGCACCTATGGCTaGTACTACACATTTGCTCAA +
Preference number: 2 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTASTYG*YYTFAQ
Trigger: TTGAGCAAATGTGTAGTAGCAGCCATAGGTGCTGGC...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCCTGGTCTTAAACTCCTaGGCTCAAGTAATCTGCCTA +
Preference number: 2 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTLVLNS*AQVICL
Trigger: TAGGCAGATTACTTGAGCTCAGGAGTTTAAGACCAG...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCTTTAACAAACAGCCCTaGGCATTTTCGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTFNKQP*AFSLGW
Trigger: CCAACCTAGCGAAAATGCCCAGGGCTGTTTGTTAAA...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCTGCATCTGTAGCACTTaGAACAACAACACATGGCAC +
Preference number: 2 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTCICST*NNNTWH
Trigger: GTGCCATGTGTTGTTGTTCCAAGTGCTACAGATGCA...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR CAA 90 bp CATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGGAAAATTCACATTTACTGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: HDLCFLHLGTCYMSI*DCCCSGKIHIYCPQ
Trigger: TTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 2 (lower is better)
Translates to: INPIIPGLEAPINASRLPSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 2 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 2 (lower is better)
Translates to: EGKWKLRCTLSTAFILREDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
3UTR-3UTR GCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAAATCAGTTTCCTTCCTaGTCCCAGCCCACACAACAT +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITNQFPS*SQPTQH
Trigger: ATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: CVKENSSRKQPKPNIISSVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGG +
Preference number: 2 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIILIWW*LQFIQR
Trigger: CCGCTGGATGAATTGCAGCCACCACCATATCAGGAT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCTGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGTCTCACCACTGATATaGGTGAGATATGGGCTAGAC +
Preference number: 2 (lower is better)
Translates to: EGKWKLRCTLSTAFILREVSPLI*VRYGLD
Trigger: GTCTAGCCCATATCTCACTCATATCAGTGGTGAGAC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCCTGGATAAGGCCTCATaGTATTTACCCAGCGCTTCA +
Preference number: 2 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSILDKAS*YLPSAS
Trigger: TGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAG...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR GCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 2 (lower is better)
Translates to: ECRPHEGKDFDQFIISASRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: LECRPHEGKDFDQFIISAIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWELDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATCACACTTAAAGGTCTaGTCTACAGGCACTGAAACA +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITSHLKV*STGTET
Trigger: TGTTTCAGTGCCTGTAGATCAGACCTTTAAGTGTGA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAAACTTTCTATTTCATaGCCTGTGCTTCCTTCACTT +
Preference number: 2 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCKLSIS*PVLPSL
Trigger: AAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTCACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 2 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFSFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399639.6
3UTR-3UTR CCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGCATTTTCGCTAGGTTaGATGAAACTGCTTTACCAG +
Preference number: 2 (lower is better)
Translates to: LECRPHEGKDFDQFIISAAFSLG*MKLLYQ
Trigger: CTGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGATATGAGTGAGATATaGGCTAGACACAGGTTATGC +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITDMSEI*ARHRLC
Trigger: GCATAACCTGTGTCTAGCCCATATCTCACTCATATC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGATATGAGTGAGATATaGGCTAGACACAGGTTATGC +
Preference number: 2 (lower is better)
Translates to: LECRPHEGKDFDQFIISADMSEI*ARHRLC
Trigger: GCATAACCTGTGTCTAGCCCATATCTCACTCATATC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCTGCATCTGTAGCACTTaGAACAACAACACATGGCAC +
Preference number: 2 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSCICST*NNNTWH
Trigger: GTGCCATGTGTTGTTGTTCCAAGTGCTACAGATGCA...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGTAAGCCACCACGCCTaGCCCAAGTTAAATTTTCAA +
Preference number: 2 (lower is better)
Translates to: EGKWKLRCTLSTAFILREVSHHA*PKLNFQ
Trigger: TTGAAAATTTAACTTGGGCCAGGCGTGGTGGCTTAC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCCTGCCAGTGGTAGTCTaGAATTGTGTGTTCTGGATA +
Preference number: 2 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSILPVVV*NCVFWI
Trigger: TATCCAGAACACACAATTCCAGACTACCACTGGCAG...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: INPIIPGLEAPINASRLPCSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTCAGTACAGCCAAGCTaGAGTAATATCTACGCATTG +
Preference number: 2 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFSVQPS*SNIYAL
Trigger: CAATGCGTAGATATTACTTCAGCTTGGCTGTACTGA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LECRPHEGKDFDQFIISAIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTACTCATGTAATAGTGTaGCTGGCTTCTTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVTHVIV*LASSTG
Trigger: CCCTGTGGAAGAAGCCAGTCACACTATTACATGAGT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCTCACACTTAAAGGTCTaGTCTACAGGCACTGAAACA +
Preference number: 2 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSSHLKV*STGTET
Trigger: TGTTTCAGTGCCTGTAGATCAGACCTTTAAGTGTGA...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACCCAAATCAAACACAGTaGTACATCAGCAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHPNQTQ*YISSHK
Trigger: TTTGTGACTGCTGATGTATCACTGTGTTTGATTTGG...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTC +
Preference number: 2 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIFTFRG*TMLIFV
Trigger: GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAA...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCACACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 2 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGAGGCAAATGCAACATaGATAGCATGGGTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: EGKWKLRCTLSTAFILREEANAT*IAWVLE
Trigger: CTCTAAAACCCATGCTATGCATGTTGCATTTGCCTC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGAGGCAAATGCAACATaGATAGCATGGGTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSEANAT*IAWVLE
Trigger: CTCTAAAACCCATGCTATGCATGTTGCATTTGCCTC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTGCAAGAATGCAAACATaGCAGCACCTATGGCTGCTA +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVARMQT*QHLWLL
Trigger: TAGCAGCCATAGGTGCTGGCATGTTTGCATTCTTGC...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTGAGAGTCGATGTATGTaGAACAGCTACTCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVESRCM*NSYSGL
Trigger: GAGACCAGAGTAGCTGTTGCACATACATCGACTCTC...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACCCAAGAAAGCCTATTTaGTCCTCCCTATGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYPRKPI*SSLWSS
Trigger: ACTGGACCATAGGGAGGACCAAATAGGCTTTCTTGG...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGATACTGATCCTTTATaGGCCTTTTCTCCTATTGGT +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITDTDPL*AFSPIG
Trigger: ACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGTGAAGTGGGTCCCCTaGGCCTTATTTAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEVKWVP*ALFNPF
Trigger: AAAAGGATTAAATAAGGCTCAGGGGACCCACTTCAC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCAT +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTKNTWW*PLFLLH
Trigger: ATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATAGGGTTCTGGGATACTaGTCCTTTATGGGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYRVLGY*SFMGLF
Trigger: GAAAAGGCCCATAAAGGATCAGTATCCCAGAACCCT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATATGACATTTGGGTACTaGAGCGGCCGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYMTFGY*SGRPIS
Trigger: TGAAATAGGACGGCCGCTTCAGTACCCAAATGTCAT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACCTGCTACTACACATTTaGTCAAAGGTCAGTCTTATT +
Preference number: 2 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHLLLHI*SKVSLI
Trigger: AATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAG...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAACATATGTATTGGGTaGTCTGTTTGCTGCCAAATT +
Preference number: 2 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHNICIG*SVCCQI
Trigger: AATTTGGCAGCAAACAGACCACCCAATACATATGTT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
3UTR-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACACCTCTTTCTCCTATTaGTACTATCTTACTTTGCAG +
Preference number: 2 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHTSFSY*YYLTLQ
Trigger: CTGCAAAGTAAGATAGTACCAATAGGAGAAAGAGGT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATAATTGCAATGACATTTaGGTACTGAAGCGGCCGTCC +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYNCNDI*VLKRPS
Trigger: GGACGGCCGCTTCAGTACCCAAATGTCATTGCAATT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTCSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTCAGTACAGCCAAGCTaGAGTAATATCTACGCATTG +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYSVQPS*SNIYAL
Trigger: CAATGCGTAGATATTACTTCAGCTTGGCTGTACTGA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCAT +
Preference number: 2 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPKNTWW*PLFLLH
Trigger: ATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGCCATTCAATCAAGGTaGGTGGGATTATTGATAAAT +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTAIQSR*VGLLIN
Trigger: ATTTATCAATAATCCCACTCACCTTGATTGAATGGC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACGTGTGTCCTCAAGTTTaGTGGGAGTCTAACATGTAT +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYVCPQV*WESNMY
Trigger: ATACATGTTAGACTCCCATCAAACTTGAGGACACAC...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 2 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWERGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399639.6
3UTR-3UTR GCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATGCTTAACCTCTTCATaGTGCAGTTTCTTTATCAAT +
Preference number: 2 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITCLTSS*CSFFIN
Trigger: ATTGATAAAGAAACTGCAGCATGAAGAGGTTAAGCA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCAGAAGAATCCAGTACTaGATTTCATCTGATGAGTGT +
Preference number: 2 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSRRIQY*ISSDEC
Trigger: ACACTCATCAGATGAAATGCAGTACTGGATTCTTCT...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTGCATTTTCGCTAGGTTaGATGAAACTGCTTTACCAG +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVAFSLG*MKLLYQ
Trigger: CTGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGC...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTGGAATTGTGTGTTCTaGATAAGGCCTCATGATATT +
Preference number: 2 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIWNCVF*IRPHDI
Trigger: AATATCATGAGGCCTTATCCAGAACACACAATTCCA...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCATTATAGCTTCAAATaGCTAAGTCCAATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFHYSFK*LSPISQ
Trigger: CTGAGAAATTGGACTTAGGCATTTGAAGCTATAATG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR GCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATGCTTAACCTCTTCATaGTGCAGTTTCTTTATCAAT +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTCLTSS*CSFFIN
Trigger: ATTGATAAAGAAACTGCAGCATGAAGAGGTTAAGCA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACACTTTCTATTCATAGCTaGAGAGGGATCTTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: GKDFDQFIISASVALGTTLSIHS*RGILKN
Trigger: ATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAG...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGTCTATGTAGGCAAATaGCAATTTTACGCAAATGAA +
Preference number: 2 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSVYVGK*QFYANE
Trigger: TTCATTTGCGTAAAATTGCCATTTGCCTACATAGAC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAGAGTAATTTACACCTaGGTTCCAATCCCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYRVIYT*VPIPVL
Trigger: TAGAACTGGGATTGGAACCCAGGTGTAAATTACTCT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAATTATCCCATTCTGTaGCCATCTTCCTACCTTAGA +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYNYPIL*PSSYLR
Trigger: TCTAAGGTAGGAAGATGGCCACAGAATGGGATAATT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATGGCCTTTTCTCCTATTaGTGCTTATGGATTACTTCC +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYGLFSY*CLWITS
Trigger: GGAAGTAATCCATAAGCACCAATAGGAGAAAAGGCC...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACGATACTGATCCTTTATaGGCCTTTTCTCCTATTGGT +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYDTDPL*AFSPIG
Trigger: ACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATC...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWECSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTAAGTCATCTACAAAATaGCACAAAAGTACCACCACT +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVKSSTK*HKSTTT
Trigger: AGTGGTGGTACTTTTGTGTCATTTTGTAGATGACTT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTTCATTATACTAGCCTaGAATTATCCCATTCTGTGG +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVFIILA*NYPILW
Trigger: CCACAGAATGGGATAATTTCAGGCTAGTATAATGAA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATTACTGTATGCAAGAATaGAAACATGCCAGCACCTAT +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYYCMQE*KHASTY
Trigger: ATAGGTGCTGGCATGTTTGCATTCTTGCATACAGTA...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACACCTCTTTCTCCTATTaGTACTATCTTACTTTGCAG +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYTSFSY*YYLTLQ
Trigger: CTGCAAAGTAAGATAGTACCAATAGGAGAAAGAGGT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTGGAACAACAACACATaGCACATATCTAGTACTCTT +
Preference number: 2 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYWNNNT*HISSTL
Trigger: AAGAGTACTAGATATGTGCCATGTGTTGTTGTTCCA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTCCTATTGGTGCTTATaGATTACTTCCATCAACACT +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVSYWCL*ITSINT
Trigger: AGTGTTGATGGAAGTAATCCATAAGCACCAATAGGA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTCTTTCTATTCATAGCTaGAGAGGGATCTTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVLSIHS*RGILKN
Trigger: ATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAG...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR GCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATCATTATAGCTTCAAATaGCTAAGTCCAATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYHYSFK*LSPISQ
Trigger: CTGAGAAATTGGACTTAGGCATTTGAAGCTATAATG...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp GGTGTACATGACAGATGGGGAGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAATTCATCCAGCGGGGGT +
Preference number: 3 (lower is better)
Translates to: GVHDRWGEPLSS*YGGGCNSSSGG
Trigger: ACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATGTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR CCA 72 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGGGGGTGTTCTTCTCAT +
Preference number: 3 (lower is better)
Translates to: QMGRTTVILIWW*LQFIQRGCSSH
Trigger: ATGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGCCAAGCATAGTTCCTTaGTCTAGAATCTGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQPSIVP*SRICQW
Trigger: CCACTGGCAGATTCTAGACAAAGGAACTATGCTTGG...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp GTCAGAAGGAGGTTGGCACACTCAGAAACTGACGAGTaGAGTGACGTTACGAGGTTCAAAACCATCCACCTT +
Preference number: 3 (lower is better)
Translates to: VRRRLAHSETDE*SDVTRFKTIHL
Trigger: AAGGTGGATGGTTTTGAACCTCGTAACGTCACTTCACTCGTCAGTTTCTGAGTGTGCCAACCTCCTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp CTGAAGCGGCCGTCCTATTTCAGGGTTCTGGGATACTaGTCCTTTATGGGCCTTTTCTCCTATTGGTGCTTA +
Preference number: 3 (lower is better)
Translates to: LKRPSYFRVLGY*SFMGLFSYWCL
Trigger: TAAGCACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATCCCAGAACCCTGAAATAGGACGGCCGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 3 (lower is better)
Translates to: ECRPHEGKDFDQFIISASSDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCCACTGCAGCCTTGACTaGCCAGGCTCCAGCGATTCT +
Preference number: 3 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSHCSLD*PGSSDS
Trigger: AGAATCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTG...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp GAACTGTATGAAAGTGGGTTGTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTACCAGTAGGTCCCTAT +
Preference number: 3 (lower is better)
Translates to: ELYESGLSFSGF*ANTCSLPVGPY
Trigger: ATAGGGACCTACTGGTAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGACAACCCACTTTCATACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 3 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFSDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR TCA 72 bp GGGTTCCAATCCCAGTTCTACTACTTACTTACCGAATaGCCTTGGGAAAGTCTGCTTAACCTCTTCATGCTG +
Preference number: 3 (lower is better)
Translates to: GFQSQFYYLLTE*PWESLLNLFML
Trigger: CAGCATGAAGAGGTTAAGCAGACTTTCCCAAGGTCATTCGGTAAGTAAGTAGTAGAACTGGGATTGGAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp ATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATaGGCATCTTGGACTGTTGCTGCAGTGGGAAAATTC +
Preference number: 3 (lower is better)
Translates to: MTCASFTWALVI*ASWTVAAVGKF
Trigger: GAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp TTCTACTCCATTAGAATTGCAATGACATTTGGGTACTaGAGCGGCCGTCCTATTTCAGGGTTCTGGGATACT +
Preference number: 3 (lower is better)
Translates to: FYSIRIAMTFGY*SGRPISGFWDT
Trigger: AGTATCCCAGAACCCTGAAATAGGACGGCCGCTTCAGTACCCAAATGTCATTGCAATTCTAATGGAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp GGTAGTCTGGAATTGTGTGTTCTGGATAAGGCCTCATaGTATTTACCCAGCGCTTCATCTTCACTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: GSLELCVLDKAS*YLPSASSSLSE
Trigger: CTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACACAATTCCAGACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp GACAGCTGTCACTGTTACCAGAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCACATCCAGTGTGCCATA +
Preference number: 3 (lower is better)
Translates to: DSCHCYQKLLFL*VIVKSHIQCAI
Trigger: TATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR GCA 72 bp CACTTGGGCACTTGTTATATGAGCATCTTGGACTGTTaGTGCAGTGGGAAAATTCACATTTACTGTCCCCAA +
Preference number: 3 (lower is better)
Translates to: HLGTCYMSILDC*CSGKIHIYCPQ
Trigger: TTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 3 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CAA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 3 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSISGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp GCAGTAGTACTGTCTCGTACATTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCTTATTTAATCCTTTTC +
Preference number: 3 (lower is better)
Translates to: AVVLSRTLDSVE*SGSPEPYLILF
Trigger: GAAAAGGATTAAATAAGGCTCAGGGGACCCACTTCACTCTACTGAATCTAATGTACGAGACAGTACTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR TCA 72 bp ACAGAGGAAGACAAATCTTTTGTCTCACCACTGATATaGGTGAGATATGGGCTAGACACAGGTTATGCCCTT +
Preference number: 3 (lower is better)
Translates to: TEEDKSFVSPLI*VRYGLDTGYAL
Trigger: AAGGGCATAACCTGTGTCTAGCCCATATCTCACTCATATCAGTGGTGAGACAAAAGATTTGTCTTCCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp GACCAACCCCTGAGGAATAAATGGTTTGATTGTTACTaGAAATTAAACCGTCAGAAGGAGGTTGGCACACTC +
Preference number: 3 (lower is better)
Translates to: DQPLRNKWFDCY*KLNRQKEVGTL
Trigger: GAGTGTGCCAACCTCCTTCTGACGGTTTAATTTTCAGTAACAATCAAACCATTTATTCCTCAGGGGTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAAAGCCAGGGCACCTTaGCCTTTACAAATGAATATA +
Preference number: 3 (lower is better)
Translates to: INPIIPGLEAPINASRLPKARAP*PLQMNI
Trigger: TATATTCATTTGTAAAGGCAAAGGTGCCCTGGCTTT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CAA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTAAAGCCAGGGCACCTTaGCCTTTACAAATGAATATA +
Preference number: 3 (lower is better)
Translates to: ECRPHEGKDFDQFIISASKARAP*PLQMNI
Trigger: TATATTCATTTGTAAAGGCAAAGGTGCCCTGGCTTT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAAACTTAACATATGTATaGGGTGGTCTGTTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITNLTYV*GGLFAA
Trigger: GGCAGCAAACAGACCACCCAATACATATGTTAAGTT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
3UTR-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGGCATTTTCGCTAGGTaGGATGAAACTGCTTTACCA +
Preference number: 3 (lower is better)
Translates to: GKDFDQFIISASVALGTTGIFAR*DETALP
Trigger: TGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGCC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGCTGCTACTACACATTaGCTCAAAGGTCAGTCTTAT +
Preference number: 3 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITAATTH*LKGQSY
Trigger: ATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAGC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAGTTTCCTTCATCTATaGATGCTTCACTACTGTATC +
Preference number: 3 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCSFLHL*MLHYCI
Trigger: GATACAGTAGTGAAGCATCAATAGATGAAGGAAACT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp TTTGTGTCCTTTCTATTCATAGCTGGAGAGGGATCTTaGAAAATACTTGGTGGTGACCACTGTTCTTACTCC +
Preference number: 3 (lower is better)
Translates to: FVSFLFIAGEGS*KILGGDHCSYS
Trigger: GGAGTAAGAACAGTGGTCACCACCAAGTATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAGGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAATAAATGCCAGTCGATaGCCATATTTGGACTATATC +
Preference number: 3 (lower is better)
Translates to: LECRPHEGKDFDQFIISAINASR*PYLDYI
Trigger: GATATAGTCCAAATATGGCAATCGACTGGCATTTAT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTGGCATTTTCGCTAGGTaGGATGAAACTGCTTTACCA +
Preference number: 3 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVGIFAR*DETALP
Trigger: TGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGCC...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGATCTTGAAAAATACTaGGTGGTGACCACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: EGKWKLRCTLSTAFILREDLEKY*VVTTVL
Trigger: AAGAACAGTGGTCACCACCAAGTATTTTTCAAGATC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACCTGTTAACCATCACTTaGGAGGGCAGAGACAATGTT +
Preference number: 3 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYLLTIT*EGRDNV
Trigger: AACATTGTCTCTGCCCTCCAAAGTGATGGTTAACAG...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACGGCTGCTGTATTAACTaGCTATTTGAAACAAAGGAT +
Preference number: 3 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHGCCIN*LFETKD
Trigger: ATCCTTTGTTTCAAATAGCAAGTTAATACAGCAGCC...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR CCA 72 bp AACATGCATAGCATGGGTTTTAGAGTAATTTACACCTaGGTTCCAATCCCAGTTCTACTACTTACTTACCGA +
Preference number: 3 (lower is better)
Translates to: NMHSMGFRVIYT*VPIPVLLLTYR
Trigger: TCGGTAAGTAAGTAGTAGAACTGGGATTGGAACCCAGGTGTAAATTACTCTAAAACCCATGCTATGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATCTGTTAACCATCACTTaGGAGGGCAGAGACAATGTT +
Preference number: 3 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYLLTIT*EGRDNV
Trigger: AACATTGTCTCTGCCCTCCAAAGTGATGGTTAACAG...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAATCTGGAGGTGGAGTTTaGGAATACAAGTTAAATTTC +
Preference number: 3 (lower is better)
Translates to: EGKWKLRCTLSTAFILRESGGGV*EYKLNF
Trigger: GAAATTTAACTTGTATTCCAAAACTCCACCTCCAGA...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACATAAAATGTAGATTATaGGGCTCCCTTCCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYIKCRL*GSLPGQ
Trigger: TTGGCCTGGAAGGGAGCCCAATAATCTACATTTTAT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGGCTGCTGTATTAACTaGCTATTTGAAACAAAGGAT +
Preference number: 3 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSGCCIN*LFETKD
Trigger: ATCCTTTGTTTCAAATAGCAAGTTAATACAGCAGCC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp CATAGCTGGAGAGGGATCTTGAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCATCAAAAATTTACATCT +
Preference number: 3 (lower is better)
Translates to: HSWRGILKNTWW*PLFLLHQKFTS
Trigger: AGATGTAAATTTTTGATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTTCAAGATCCCTCTCCAGCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp ATATTTACCCAGCGCTTCATCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTCCATGTAGGAATTATA +
Preference number: 3 (lower is better)
Translates to: IFTQRFIFTFRG*TMLIFVHVGII
Trigger: TATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR GCA 72 bp TCTACTACTTACTTACCGAATGACCTTGGGAAAGTCTaGTTAACCTCTTCATGCTGCAGTTTCTTTATCAAT +
Preference number: 3 (lower is better)
Translates to: STTYLPNDLGKV*LTSSCCSFFIN
Trigger: ATTGATAAAGAAACTGCAGCATGAAGAGGTTAAGCAGACTTTCCCAAGGTCATTCGGTAAGTAAGTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp CATTTTGTTCTTGGAAAGAACGTGTGTCCTCAAGTTTaGTGGGAGTCTAACATGTATTTGTTCTTTAAGACC +
Preference number: 3 (lower is better)
Translates to: HFVLGKNVCPQV*WESNMYLFFKT
Trigger: GGTCTTAAAGAACAAATACATGTTAGACTCCCATCAAACTTGAGGACACACGTTCTTTCCAAGAACAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATAAATGCCAGTCGATaGCCATATTTGGACTATATC +
Preference number: 3 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEINASR*PYLDYI
Trigger: GATATAGTCCAAATATGGCAATCGACTGGCATTTAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
3UTR-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTTTTACATTTTGTTCTaGGAAAGAACGTGTGTCCTC +
Preference number: 3 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVFYILF*ERTCVL
Trigger: GAGGACACACGTTCTTTCCAAGAACAAAATGTAAAA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR GCA 72 bp TTTCATGCGATGTACACCATACAGTCTAAACCGAACTaGATAATTTCCAATCATCTCAGATTCAACATGATT +
Preference number: 3 (lower is better)
Translates to: FHAMYTIQSKPN*IISNHLRFNMI
Trigger: AATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTCGGTTTAGACTGTATGGTGTACATCGCATGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
3UTR TCA 72 bp TATGATATCATTCAGTATCCCCACACATCTTCATATTaGCAAACACTCTCAATTCTTTTACCTCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: YDIIQYPHTSSY*QTLSILLPLSP
Trigger: AGGAGAAAGAGGTAAAAGAATTGAGAGTGTTTGTCAATATGAAGATGTGTGGGGATACTGAATGATATCATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR TCA 72 bp ACAAGATTCATAAAAACTAAGACTCATGTAATAGTGTaGCTGGCTTCTTCCACAGGGAATTTAGTTCAATTC +
Preference number: 3 (lower is better)
Translates to: TRFIKTKTHVIV*LASSTGNLVQF
Trigger: GAATTGAACTAAATTCCCTGTGGAAGAAGCCAGTCACACTATTACATGAGTCTTAGTTTTTATGAATCTTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGGGCATGGTCCTCTCTaGATGCTGGTTTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQGHGPL*MLVFAL
Trigger: GAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGTGTGAAGACAGGGCATaGTCCTCTCTGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQCEDRA*SSLDAG
Trigger: ACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACA...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGAAGGTGTACTTGCCATaGGTTGCCACCTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQKVYLP*VATCPV
Trigger: AACAGGACAGGTGGCAACTCATGGCAAGTACACCTT...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACGGCTCACTGCAGCCTTaGCTTGCCAGGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHGSLQP*LARLQR
Trigger: TCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTGAGCC...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCGCTATCTTGGCTCACTaGAGCCTTGACTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTAILAH*SLDLPG
Trigger: GCCTGGCAAGTCAAGGCTGCAGTGAGCCAAGATAGC...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCCCAGGAGGCGGAAGTTaGAGTGAGCCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCPGGGS*SEPRWC
Trigger: GCACCATCTTGGCTCACTGCAACTTCCGCCTCCTGG...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTACCGCACCAACTGGATaGCGGGGGCAGCAGACGCGA +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCTAPTG*RGQQTR
Trigger: TCGCGTCTGCTGCCCCCGCCATCCAGTTGGTGCGGT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTATGGACCGCACCAACTaGATGGCGGGGGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCMDRTN*MAGAAD
Trigger: GTCTGCTGCCCCCGCCATCCAGTTGGTGCGGTCCAT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAATGGACCGCACCAACTaGATGGCGGGGGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTMDRTN*MAGAAD
Trigger: GTCTGCTGCCCCCGCCATCCAGTTGGTGCGGTCCAT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCTGTGAAGACAGGGCATaGTCCTCTCTGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTCEDRA*SSLDAG
Trigger: ACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACA...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACGGGAGTCACAGCCCATaGGTTGCCACCTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHGSHSP*VATCPV
Trigger: AACAGGACAGGTGGCAACTCATGGGCTGTGACTCCC...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTACCGCACCAACTGGATaGCGGGGGCAGCAGACGCGA +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVTAPTG*RGQQTR
Trigger: TCGCGTCTGCTGCCCCCGCCATCCAGTTGGTGCGGT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCCACCCAGTTGTCAGGTaGCTCCTTCTAAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTHPVVR*LLLRKH
Trigger: ATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTG...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQFTFRG*TMLIFV
Trigger: GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAA...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCACTGGGGCCACTTTGTTaGACCACCCAGTTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISALGPLC*TTQLSG
Trigger: ACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAG...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGGCTCACTGCAGCCTTaGCTTGCCAGGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGGSLQP*LARLQR
Trigger: TCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTGAGCC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGTGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCAGAGCTTTCCTCTTCTaGGCGAAAGCCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTRAFLF*AKATHH
Trigger: ATGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCT...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQKLLFL*VIVKSH
Trigger: GTGACTTTTGACTATGACTCACAAGAACAGAAGCTT...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCMLGCL*QLSLLP
Trigger: TGGTAACAGTGACAGCTGTCACAGACATCCCAACAT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCTGGGGCCACTTTGTTaGACCACCCAGTTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFLGPLC*TTQLSG
Trigger: ACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTCTGGGGCCACTTTGTTaGACCACCCAGTTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCLGPLC*TTQLSG
Trigger: ACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAG...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGATCTTGGACTGTTGCTaGAGTGGGAAAATTCACATT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQILDCC*SGKIHI
Trigger: AATGTGAATTTTCCCACTGCAGCAACAGTCCAAGAT...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCCTGCCAGTGGTAGTCTaGAATTGTGTGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTLPVVV*NCVFWI
Trigger: TATCCAGAACACACAATTCCAGACTACCACTGGCAG...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPILIWW*LQFIQR
Trigger: CCGCTGGATGAATTGCAGCCACCACCATATCAGGAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAACAGAACAGTCCATTaGGTGGTCTGTTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCNRTVH*VVCLLP
Trigger: TGGCAGCAAACAGACCACCCAATGGACTGTTCTGTT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCGTAGTCCCAGTTACTTaGGATGCTGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCVVPVT*DAEAEE
Trigger: TTCTTCTGCCTCAGCATCCCAAGTAACTGGGACTAC...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACTGGATAAGGCCTCATaGTATTTACCCAGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPLDKAS*YLPSAS
Trigger: TGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCTGGGCACTTGTTATATaGGCATCTTGGACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCWALVI*ASWTVA
Trigger: AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCA...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPMLGCL*QLSLLP
Trigger: TGGTAACAGTGACAGCTGTCACAGACATCCCAACAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAAGGTGTACTTGCCATaGGTTGCCACCTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHKVYLP*VATCPV
Trigger: AACAGGACAGGTGGCAACTCATGGCAAGTACACCTT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR TCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGCAATATCACAGGCAATaGCATTTTCCCTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQQYHRQ*HFPLKI
Trigger: AATCTTCAAGGGAAAATGTCATTGCCTGTGATATTG...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATCAGAAACTGACGAGTaGAGTGACGTTACGAGGTTC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPSETDE*SDVTRF
Trigger: GAACCTCGTAACGTCACTTCACTCGTCAGTTTCTGA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACGGCTCAGGACTGCAGTaGTGTCACTTGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHGSGLQ*CHLEHL
Trigger: AAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCC...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAGAACAAGGTGTACTTaGCATGAGTTGCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPRTRCT*HELPPV
Trigger: GACAGGTGGCAACTCATGGCAAGTACACCTTGTTCT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 4 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCCACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTACTGCAGCCTTGACTTaGCAGGCTCCAGCGATTCTC +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSTAALT*QAPAIL
Trigger: GAGAATCGCTGGAGCCTGGCAAGTCAAGGCTGCAGT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGCTATCTTGGCTCACTaGAGCCTTGACTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPAILAH*SLDLPG
Trigger: GCCTGGCAAGTCAAGGCTGCAGTGAGCCAAGATAGC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGCCAGCACCTATGGCTaGTACTACACATTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPASTYG*YYTFAQ
Trigger: TTGAGCAAATGTGTAGTAGCAGCCATAGGTGCTGGC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGCAAGAATGCAAACATaGCAGCACCTATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASARMQT*QHLWLL
Trigger: TAGCAGCCATAGGTGCTGGCATGTTTGCATTCTTGC...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCCTGCCAGTGGTAGTCTaGAATTGTGTGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCLPVVV*NCVFWI
Trigger: TATCCAGAACACACAATTCCAGACTACCACTGGCAG...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGGGCATGGTCCTCTCTaGATGCTGGTTTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCGHGPL*MLVFAL
Trigger: GAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCSFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGTGACTTGGTCTCTTTaGATCAGGCGAAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFVTWSL*IRRKRR
Trigger: CCTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCAC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACTGGAGATACTTTCCTaGGGCCACTTTGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPLEILS*GHFVEP
Trigger: TGGTTCAACAAAGTGGCCCCAGGAAAGTATCTCCAG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAACCTCCCCAACAGCAGTaGTCAAATCCTCTACAGCAC +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREPPQQQ*SNPLQH
Trigger: GTGCTGTAGAGGATTTGACCACTGCTGTTGGGGAGG...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAAATCCAACTGCCTCTaGAGATACTGTAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCKSNCL*RYCSPS
Trigger: ACTGGGACTACAGTATCTCCAGAGGCAGTTGGATTT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAMLGCL*QLSLLP
Trigger: TGGTAACAGTGACAGCTGTCACAGACATCCCAACAT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAAGGTGTACTTGCCATaGGTTGCCACCTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFKVYLP*VATCPV
Trigger: AACAGGACAGGTGGCAACTCATGGCAAGTACACCTT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGTCTCACCACTGATATaGGTGAGATATGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITVSPLI*VRYGLD
Trigger: GTCTAGCCCATATCTCACTCATATCAGTGGTGAGAC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAACTCATGTAATAGTGTaGCTGGCTTCTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITTHVIV*LASSTG
Trigger: CCCTGTGGAAGAAGCCAGTCACACTATTACATGAGT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACTGGTCTTAAACTCCTaGGCTCAAGTAATCTGCCTA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPLVLNS*AQVICL
Trigger: TAGGCAGATTACTTGAGCTCAGGAGTTTAAGACCAG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACTCAGAAACTGACGAGTaGAGTGACGTTACGAGGTTC +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHSETDE*SDVTRF
Trigger: GAACCTCGTAACGTCACTTCACTCGTCAGTTTCTGA...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAGGGTTCTGGGATACTaGTCCTTTATGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHRVLGY*SFMGLF
Trigger: GAAAAGGCCCATAAAGGATCAGTATCCCAGAACCCT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGGCTCAGGACTGCAGTaGTGTCACTTGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCGSGLQ*CHLEHL
Trigger: AAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCGGCTCAGGACTGCAGTaGTGTCACTTGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIGSGLQ*CHLEHL
Trigger: AAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCC...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATGGTCCTCTCTGGATaGTGGTTTTTGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPMVLSG*WFLLSV
Trigger: AACAGAGAGCAAAAACCAGCATCCAGAGAGGACCAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACACTGCAGCCTTGACTTaGCAGGCTCCAGCGATTCTC +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYTAALT*QAPAIL
Trigger: GAGAATCGCTGGAGCCTGGCAAGTCAAGGCTGCAGT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGCAAGAATGCAAACATaGCAGCACCTATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITARMQT*QHLWLL
Trigger: TAGCAGCCATAGGTGCTGGCATGTTTGCATTCTTGC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACTGCCAGTGGTAGTCTaGAATTGTGTGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPLPVVV*NCVFWI
Trigger: TATCCAGAACACACAATTCCAGACTACCACTGGCAG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCILIWW*LQFIQR
Trigger: CCGCTGGATGAATTGCAGCCACCACCATATCAGGAT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGGGCATGGTCCTCTCTaGATGCTGGTTTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPGHGPL*MLVFAL
Trigger: GAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGTGAAGACAGGGCATaGTCCTCTCTGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSCEDRA*SSLDAG
Trigger: ACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAACAGAACAGTCCATTaGGTGGTCTGTTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHNRTVH*VVCLLP
Trigger: TGGCAGCAAACAGACCACCCAATGGACTGTTCTGTT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASSFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCACCCAGTTGTCAGGTaGCTCCTTCTAAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFHPVVR*LLLRKH
Trigger: ATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAAATCCAACTGCCTCTaGAGATACTTTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFKSNCL*RYFPGA
Trigger: GGCCCCAGGAAAGTATCTCCAGAGGCAGTTGGATTT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAAATCCAACTGCCTCTaGAGATACTTTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCKSNCL*RYFPGA
Trigger: GGCCCCAGGAAAGTATCTCCAGAGGCAGTTGGATTT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAACATGCCAGCACCTATaGCTGCTACTACACATTTGC +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITTCQHL*LLLHIC
Trigger: GCAAATGTGTAGTAGCAGCCATAGGTGCTGGCATGT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTCCGTCAGAAGGAGGTTaGCACACTCAGAAACTGACG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSPSEGG*HTQKLT
Trigger: CGTCAGTTTCTGAGTGTGCCAACCTCCTTCTGACGG...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGTGCAACAGCTACTCTaGTCTCCCCTCACACAACAA +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTVQQLL*SPLTQQ
Trigger: TTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCAC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATTCACTTTCAGAGGATaGACCATGCTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPFTFRG*TMLIFV
Trigger: GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATGGGCACTTGTTATATaGGCATCTTGGACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITWALVI*ASWTVA
Trigger: AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACACTGGTCTTAAACTCCTaGGCTCAAGTAATCTGCCTA +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITLVLNS*AQVICL
Trigger: TAGGCAGATTACTTGAGCTCAGGAGTTTAAGACCAG...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAGGGTTCTGGGATACTaGTCCTTTATGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILRERVLGY*SFMGLF
Trigger: GAAAAGGCCCATAAAGGATCAGTATCCCAGAACCCT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTCAGTTTTCTGGGTTTTaGAATCACCTGGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASQFSGF*NHLVTA
Trigger: TGCTGTAACCAGGTGATTTCAAAACCCAGAAAACTG...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTACAATGCAAGAGTATTaGTCAGTGAGGAACCTCATG +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASTMQEY*SVRNLM
Trigger: CATGAGGTTCCTCACTGATCAATACTCTTGCATTGT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCAGTTAAAGCATAGCTaGCCTCCCCAACAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGQLKHS*PPQQQW
Trigger: CCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGGCTCAGGACTGCAGTaGTGTCACTTGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSGSGLQ*CHLEHL
Trigger: AAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAGAACAAGGTGTACTTaGCATGAGTTGCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCRTRCT*HELPPV
Trigger: GACAGGTGGCAACTCATGGCAAGTACACCTTGTTCT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCAGAACAAGGTGTACTTaGCATGAGTTGCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSRTRCT*HELPPV
Trigger: GACAGGTGGCAACTCATGGCAAGTACACCTTGTTCT...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCAGAACAAGGTGTACTTaGCATGAGTTGCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIRTRCT*HELPPV
Trigger: GACAGGTGGCAACTCATGGCAAGTACACCTTGTTCT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGATTTGGCTGCCCTCTaGGGATGGATGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSDLAAL*GWMSCI
Trigger: AATGCAAGACATCCATCCGCAGAGGGCAGCCAAATC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACACACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGCCAGCACCTATGGCTaGTACTACACATTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFASTYG*YYTFAQ
Trigger: TTGAGCAAATGTGTAGTAGCAGCCATAGGTGCTGGC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCAGAAGAATCCAGTACTaGATTTCATCTGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTRRIQY*ISSDEC
Trigger: ACACTCATCAGATGAAATGCAGTACTGGATTCTTCT...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGAGAGTCGATGTATGTaGAACAGCTACTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFESRCM*NSYSGL
Trigger: GAGACCAGAGTAGCTGTTGCACATACATCGACTCTC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSILIWW*LQFIQR
Trigger: CCGCTGGATGAATTGCAGCCACCACCATATCAGGAT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGGGCATGGTCCTCTCTaGATGCTGGTTTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGGHGPL*MLVFAL
Trigger: GAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTGTGAAGACAGGGCATaGTCCTCTCTGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGCEDRA*SSLDAG
Trigger: ACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHSFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATGTCAAAGGATGTTGTaGTCTTTGGATATGTTCCCG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPCQRML*SLDMFP
Trigger: CGGGAACATATCCAAAGACCACAACATCCTTTGACA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGCATTTTCGCTAGGTTaGATGAAACTGCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPAFSLG*MKLLYQ
Trigger: CTGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATGCATCTGTAGCACTTaGAACAACAACACATGGCAC +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISACICST*NNNTWH
Trigger: GTGCCATGTGTTGTTGTTCCAAGTGCTACAGATGCA...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCCAAGAAAGCCTATTTaGTCCTCCCTATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFPRKPI*SSLWSS
Trigger: ACTGGACCATAGGGAGGACCAAATAGGCTTTCTTGG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCCGTCAGAAGGAGGTTaGCACACTCAGAAACTGACG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEPSEGG*HTQKLT
Trigger: CGTCAGTTTCTGAGTGTGCCAACCTCCTTCTGACGG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGGCCTTTTCTCCTATTaGTGCTTATGGATTACTTCC +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASGLFSY*CLWITS
Trigger: GGAAGTAATCCATAAGCACCAATAGGAGAAAAGGCC...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAAATTGCAATGACATTTaGGTACTGAAGCGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTNCNDI*VLKRPS
Trigger: GGACGGCCGCTTCAGTACCCAAATGTCATTGCAATT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAATTGCAATGACATTTaGGTACTGAAGCGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCNCNDI*VLKRPS
Trigger: GGACGGCCGCTTCAGTACCCAAATGTCATTGCAATT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAATCTAGCCAAAGGCTaGCCATCTCTTCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCNLAKG*PSLPNS
Trigger: GCTGTTTGGAAGAGATGGCCAGCCTTTGGCTAGATT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR CAA 72 bp TTTATAGGTAGAAGAACAAGGTGTACTTGCCATGAGTaGCCACCTGTCCTGTTATATGTTGGGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FIGRRTRCTCHE*PPVLLYVGMSV
Trigger: CACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTTGTTCTTCTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATGGGCACTTGTTATATaGGCATCTTGGACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTWALVI*ASWTVA
Trigger: AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPKLLFL*VIVKSH
Trigger: GTGACTTTTGACTATGACTCACAAGAACAGAAGCTT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGTGAAGTGGGTCCCCTaGGCCTTATTTAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFVKWVP*ALFNPF
Trigger: AAAAGGATTAAATAAGGCTCAGGGGACCCACTTCAC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGTGAAGTGGGTCCCCTaGGCCTTATTTAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREVKWVP*ALFNPF
Trigger: AAAAGGATTAAATAAGGCTCAGGGGACCCACTTCAC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTTAGATTCAGTAGAGTaGAGTGGGTCCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYLDSVE*SGSPEP
Trigger: AGGCTCAGGGGACCCACTTCACTCTACTGAATCTAA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTTCACTGGAAAGACTATaGTATCATTCAGTATCCCCA +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASSLERL*YHSVSP
Trigger: TGGGGATACTGAATGATATCATAGTCTTTCCAGTGA...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGTCTCACCACTGATATaGGTGAGATATGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPVSPLI*VRYGLD
Trigger: GTCTAGCCCATATCTCACTCATATCAGTGGTGAGAC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCACACTTAAAGGTCTaGTCTACAGGCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISASHLKV*STGTET
Trigger: TGTTTCAGTGCCTGTAGATCAGACCTTTAAGTGTGA...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAAGGAGGACCAACCCCTaGGGAATAAATGGTTTGATT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTRRTNP*GINGLI
Trigger: AATCAAACCATTTATTCCTCAGGGGTTGGTCCTCCT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCACCCCCAAACTTCTTATaGCTGTATGGTATGTACTTC +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAPPNFL*LYGMYF
Trigger: GAAGTACATACCATACAGTCATAAGAAGTTTGGGGG...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGGCTCAGGACTGCAGTaGTGTCACTTGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEGSGLQ*CHLEHL
Trigger: AAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATTTCAGGGCTCAGGACTaGAGTGCTGTCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYFRAQD*SAVTWN
Trigger: GTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAA...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCGTACTTGCCATGAGTTaGCACCTGTCCTGTTATATG +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIVLAMS*HLSCYM
Trigger: CATATAACAGGACAGGTGGCAACTCATGGCAAGTAC...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTATGGTCCTCTCTGGATaGTGGTTTTTGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCMVLSG*WFLLSV
Trigger: AACAGAGAGCAAAAACCAGCATCCAGAGAGGACCAT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCATGGTCCTCTCTGGATaGTGGTTTTTGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIMVLSG*WFLLSV
Trigger: AACAGAGAGCAAAAACCAGCATCCAGAGAGGACCAT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCCAGTCTAAACCGAACTaGATAATTTCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCQSKPN*IISNHL
Trigger: GAGATGATTGGAAATTATGCAGTTCGGTTTAGACTG...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCATCACAGCCCATGAGTTaGCACCTGTCCTGTTATATG +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPSQPMS*HLSCYM
Trigger: CATATAACAGGACAGGTGGCAACTCATGGGCTGTGA...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR GCA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCTGCTTAACCTCTTCATaGTGCAGTTTCTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTCLTSS*CSFFIN
Trigger: ATTGATAAAGAAACTGCAGCATGAAGAGGTTAAGCA...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGAGAGTCGATGTATGTaGAACAGCTACTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSESRCM*NSYSGL
Trigger: GAGACCAGAGTAGCTGTTGCACATACATCGACTCTC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCCTGCCAGTGGTAGTCTaGAATTGTGTGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSLPVVV*NCVFWI
Trigger: TATCCAGAACACACAATTCCAGACTACCACTGGCAG...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATCCTGATATGGTGGTaGCTGCAATTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEILIWW*LQFIQR
Trigger: CCGCTGGATGAATTGCAGCCACCACCATATCAGGAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGGTGTACATGACAGATaGGGAGAACCACTGTCATCC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGGVHDR*GEPLSS
Trigger: GGATGACAGTGGTTCTCCCCATCTGTCATGTACACC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACTGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCACCCAGTTGTCAGGTaGCTCCTTCTAAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEHPVVR*LLLRKH
Trigger: ATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTCTGGAGATACTTTCCTaGGGCCACTTTGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSLEILS*GHFVEP
Trigger: TGGTTCAACAAAGTGGCCCCAGGAAAGTATCTCCAG...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAAATCCAACTGCCTCTaGAGATACTTTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEKSNCL*RYFPGA
Trigger: GGCCCCAGGAAAGTATCTCCAGAGGCAGTTGGATTT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTTTAACAAACAGCCCTaGGCATTTTCGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFFNKQP*AFSLGW
Trigger: CCAACCTAGCGAAAATGCCCAGGGCTGTTTGTTAAA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAATTATCCCATTCTGTaGCCATCTTCCTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPNYPIL*PSSYLR
Trigger: TCTAAGGTAGGAAGATGGCCACAGAATGGGATAATT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGTAAGCCACCACGCCTaGCCCAAGTTAAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCVSHHA*PKLNFQ
Trigger: TTGAAAATTTAACTTGGGCCAGGCGTGGTGGCTTAC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGGCCTTTTCTCCTATTaGTGCTTATGGATTACTTCC +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITGLFSY*CLWITS
Trigger: GGAAGTAATCCATAAGCACCAATAGGAGAAAAGGCC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACACCTATTTCAGGGTTCTaGGATACTGATCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITPISGF*DTDPLW
Trigger: CCATAAAGGATCAGTATCCCAGAACCCTGAAATAGG...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACCCTATTTCAGGGTTCTaGGATACTGATCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHPISGF*DTDPLW
Trigger: CCATAAAGGATCAGTATCCCAGAACCCTGAAATAGG...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGTGCAACAGCTACTCTaGTCTCCCCTCACACAACAA +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEVQQLL*SPLTQQ
Trigger: TTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCAC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCFTFRG*TMLIFV
Trigger: GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFFTFRG*TMLIFV
Trigger: GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATGAACCACTGTCATCCTaGTATGGTGGTGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYEPLSS*YGGGCN
Trigger: ATTGCAGCCACCACCATATCAGGATGACAGTGGTTC...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGGGCACTTGTTATATaGGCATCTTGGACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSWALVI*ASWTVA
Trigger: AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAAACTTTCTATTTCATaGCCTGTGCTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPKLSIS*PVLPSL
Trigger: AAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEMLGCL*QLSLLP
Trigger: TGGTAACAGTGACAGCTGTCACAGACATCCCAACAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACAATATCACAGGCAATaGCATTTTCCCTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPQYHRQ*HFPLKI
Trigger: AATCTTCAAGGGAAAATGTCATTGCCTGTGATATTG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACATGGTATCAAGCAAATaGTTTAACAAACAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHMVSSK*FNKQPW
Trigger: CCAGGGCTGTTTGTTAAATCATTTGCTTGATACCAT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCACTGGAAAGACTATaGTATCATTCAGTATCCCCA +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISASLERL*YHSVSP
Trigger: TGGGGATACTGAATGATATCATAGTCTTTCCAGTGA...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCAT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHKNTWW*PLFLLH
Trigger: ATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGCCATTCAATCAAGGTaGGTGGGATTATTGATAAAT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPAIQSR*VGLLIN
Trigger: ATTTATCAATAATCCCACTCACCTTGATTGAATGGC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGTCAAGGAGCAGAACTaGTTAATATGCTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPVKEQN*LICFWN
Trigger: ATTCCAAAAGCATATTAATCAGTTCTGCTCCTTGAC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGACTCATGTAATAGTGTaGCTGGCTTCTTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGTHVIV*LASSTG
Trigger: CCCTGTGGAAGAAGCCAGTCACACTATTACATGAGT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGTGTGTCCTCAAGTTTaGTGGGAGTCTAACATGTAT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFVCPQV*WESNMY
Trigger: ATACATGTTAGACTCCCATCAAACTTGAGGACACAC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTATGACATTTGGGTACTaGAGCGGCCGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVMTFGY*SGRPIS
Trigger: TGAAATAGGACGGCCGCTTCAGTACCCAAATGTCAT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCCAGTTTTCTGGGTTTTaGAATCACCTGGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSQFSGF*NHLVTA
Trigger: TGCTGTAACCAGGTGATTTCAAAACCCAGAAAACTG...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTTTTACCCATTCCATGTaGGTACTAAAACGTAAACAG +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASFTHSM*VLKRKQ
Trigger: CTGTTTACGTTTTAGTACTCACATGGAATGGGTAAA...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACCCTCTACAGCACTACTaGTTGTGTCTACTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYPLQHY*LCLLER
Trigger: CCTCTCTAGTAGACACAATCAGTAGTGCTGTAGAGG...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGTACTTGCCATGAGTTaGCACCTGTCCTGTTATATG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSVLAMS*HLSCYM
Trigger: CATATAACAGGACAGGTGGCAACTCATGGCAAGTAC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGTACTTGCCATGAGTTaGCACCTGTCCTGTTATATG +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPVLAMS*HLSCYM
Trigger: CATATAACAGGACAGGTGGCAACTCATGGCAAGTAC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTATGGTCCTCTCTGGATaGTGGTTTTTGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSMVLSG*WFLLSV
Trigger: AACAGAGAGCAAAAACCAGCATCCAGAGAGGACCAT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACAGTCTAAACCGAACTaGATAATTTCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPQSKPN*IISNHL
Trigger: GAGATGATTGGAAATTATGCAGTTCGGTTTAGACTG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 4 (lower is better)
Translates to: INPIIPGLEAPINASRLPAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGAGGCAAATGCAACATaGATAGCATGGGTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFEANAT*IAWVLE
Trigger: CTCTAAAACCCATGCTATGCATGTTGCATTTGCCTC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTAAACAGGGAGGCAAATaGAACATGCATAGCATGGGT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSKQGGK*NMHSMG
Trigger: ACCCATGCTATGCATGTTGCATTTGCCTCCCTGTTT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACTACTGTATGCAAGAATaGAAACATGCCAGCACCTAT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHYCMQE*KHASTY
Trigger: ATAGGTGCTGGCATGTTTGCATTCTTGCATACAGTA...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTAGAAGAATCCAGTACTaGATTTCATCTGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASRRIQY*ISSDEC
Trigger: ACACTCATCAGATGAAATGCAGTACTGGATTCTTCT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAATCAGTTTCCTTCCTaGTCCCAGCCCACACAACAT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGNQFPS*SQPTQH
Trigger: ATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGTCTACAGCTTCTTCTaGTACAGAGCTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPVYSFF*YRAFLF
Trigger: GAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGAC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGGATGTTGTGGTCTTTaGATATGTTCCCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAGCCGL*ICSRFE
Trigger: TTCAAATCGGGAACATATCCAAAGACCACAACATCC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAGAGTAATTTACACCTaGGTTCCAATCCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHRVIYT*VPIPVL
Trigger: TAGAACTGGGATTGGAACCCAGGTGTAAATTACTCT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGATATGAGTGAGATATaGGCTAGACACAGGTTATGC +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREDMSEI*ARHRLC
Trigger: GCATAACCTGTGTCTAGCCCATATCTCACTCATATC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGATATGAGTGAGATATaGGCTAGACACAGGTTATGC +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSDMSEI*ARHRLC
Trigger: GCATAACCTGTGTCTAGCCCATATCTCACTCATATC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTTGGAACAACAACACATaGCACATATCTAGTACTCTT +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASWNNNT*HISSTL
Trigger: AAGAGTACTAGATATGTGCCATGTGTTGTTGTTCCA...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGTAAGCCACCACGCCTaGCCCAAGTTAAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPVSHHA*PKLNFQ
Trigger: TTGAAAATTTAACTTGGGCCAGGCGTGGTGGCTTAC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGACATGCCAGCACCTATaGCTGCTACTACACATTTGC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGTCQHL*LLLHIC
Trigger: GCAAATGTGTAGTAGCAGCCATAGGTGCTGGCATGT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCCAAGAAAGCCTATTTaGTCCTCCCTATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEPRKPI*SSLWSS
Trigger: ACTGGACCATAGGGAGGACCAAATAGGCTTTCTTGG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAATCTAGCCAAAGGCTaGCCATCTCTTCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYNLAKG*PSLPNS
Trigger: GCTGTTTGGAAGAGATGGCCAGCCTTTGGCTAGATT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTGGGCACTTGTTATATaGGCATCTTGGACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEWALVI*ASWTVA
Trigger: AGCAACAGTCCAAGATGCTCATATAACAAGTGCCCA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISACSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTGTGAAGTGGGTCCCCTaGGCCTTATTTAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVVKWVP*ALFNPF
Trigger: AAAAGGATTAAATAAGGCTCAGGGGACCCACTTCAC...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATTCTTTTTCAGGTTTCTaGGCCAACACCTGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYSFSGF*ANTCSL
Trigger: TAGGGAGCAGGTGTTGGCTCAGAAACCTGAAAAAGA...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAAAAATACTTGGTGGTaGCCACTGTTCTTACTCCAT +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREKNTWW*PLFLLH
Trigger: ATGGAGTAAGAACAGTGGTCACCACCAAGTATTTTT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACAAGTCATCTACAAAATaGCACAAAAGTACCACCACT +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHKSSTK*HKSTTT
Trigger: AGTGGTGGTACTTTTGTGTCATTTTGTAGATGACTT...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAAAGTCATCTACAAAATaGCACAAAAGTACCACCACT +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAKSSTK*HKSTTT
Trigger: AGTGGTGGTACTTTTGTGTCATTTTGTAGATGACTT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAGTCAAGGAGCAGAACTaGTTAATATGCTTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITVKEQN*LICFWN
Trigger: ATTCCAAAAGCATATTAATCAGTTCTGCTCCTTGAC...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATTCATTATACTAGCCTaGAATTATCCCATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITFIILA*NYPILW
Trigger: CCACAGAATGGGATAATTTCAGGCTAGTATAATGAA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTAGGAGGACCAACCCCTaGGGAATAAATGGTTTGATT +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVRRTNP*GINGLI
Trigger: AATCAAACCATTTATTCCTCAGGGGTTGGTCCTCCT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAAGGAAGCTTCTTGCCTaGAAAAATGAAAGAACTAGG +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTRKLLA*KNERTR
Trigger: CCTAGTTCTTTCATTTTTTCAGGCAAGAAGCTTCCT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAGGAAGCTTCTTGCCTaGAAAAATGAAAGAACTAGG +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCRKLLA*KNERTR
Trigger: CCTAGTTCTTTCATTTTTTCAGGCAAGAAGCTTCCT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGTACTTTCAAGTTCTTaGCAAATAGATCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTVLSSS*QIDPAL
Trigger: AAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTAC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCATCTTGGACTGTTGCTaGAGTGGGAAAATTCACATT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFILDCC*SGKIHI
Trigger: AATGTGAATTTTCCCACTGCAGCAACAGTCCAAGAT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGCATCTTGGACTGTTaGTGCAGTGGGAAAATTCAC +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESILDC*CSGKIH
Trigger: GTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 4 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 4 (lower is better)
Translates to: LECRPHEGKDFDQFIISAAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCACAATGAACCTAAGTaGACAAAGGGAACATGCCTG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEHNEPK*TKGTCL
Trigger: CAGGCATGTTCCCTTTGTGCACTTAGGTTCATTGTG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAAGAGGCTCCCATAAATaGCAGTCGATTGCCATATTT +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPRGSHK*QSIAIF
Trigger: AAATATGGCAATCGACTGGCATTTATGGGAGCCTCT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTTGCTTAACCTCTTCATaGTGCAGTTTCTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: ECRPHEGKDFDQFIISASCLTSS*CSFFIN
Trigger: ATTGATAAAGAAACTGCAGCATGAAGAGGTTAAGCA...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGAGGCAAATGCAACATaGATAGCATGGGTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSEANAT*IAWVLE
Trigger: CTCTAAAACCCATGCTATGCATGTTGCATTTGCCTC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTAAACAGGGAGGCAAATaGAACATGCATAGCATGGGT +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVKQGGK*NMHSMG
Trigger: ACCCATGCTATGCATGTTGCATTTGCCTCCCTGTTT...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAAAGAGTATTACGCTTTaGTCTTTCTGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTKSITL*SFCSPQ
Trigger: TTGGGGACTACAGAAAGAGCAAAGCGTAATACTCTT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAAGAGTATTACGCTTTaGTCTTTCTGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREKSITL*SFCSPQ
Trigger: TTGGGGACTACAGAAAGAGCAAAGCGTAATACTCTT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATGTCATCCTGATATGGTaGTGGCTGCAATTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYVILIW*WLQFIQ
Trigger: CTGGATGAATTGCAGCCACCACCATATCAGGATGAC...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGCAGTGCTGTCACTTaGAACATCTTCTTCATATCC +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSCSAVT*NIFFIS
Trigger: GGATATGAAGAAGATGTTCCAAGTGACAGCACTGCA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGTTTCCTTATATACTaGATTTGGCTGCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESFLIY*IWLPSA
Trigger: CGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGGATGTTGTGGTCTTTaGATATGTTCCCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCGCCGL*ICSRFE
Trigger: TTCAAATCGGGAACATATCCAAAGACCACAACATCC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGTCAAAGGATGTTGTaGTCTTTGGATATGTTCCCG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSCQRML*SLDMFP
Trigger: CGGGAACATATCCAAAGACCACAACATCCTTTGACA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGCATTTTCGCTAGGTTaGATGAAACTGCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSAFSLG*MKLLYQ
Trigger: CTGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTTTAACAAACAGCCCTaGGCATTTTCGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGFNKQP*AFSLGW
Trigger: CCAACCTAGCGAAAATGCCCAGGGCTGTTTGTTAAA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTGCATCTGTAGCACTTaGAACAACAACACATGGCAC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGCICST*NNNTWH
Trigger: GTGCCATGTGTTGTTGTTCCAAGTGCTACAGATGCA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAATTATCCCATTCTGTaGCCATCTTCCTACCTTAGA +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILRENYPIL*PSSYLR
Trigger: TCTAAGGTAGGAAGATGGCCACAGAATGGGATAATT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAGATACTGATCCTTTATaGGCCTTTTCTCCTATTGGT +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREDTDPL*AFSPIG
Trigger: ACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATC...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGATACTGATCCTTTATaGGCCTTTTCTCCTATTGGT +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSDTDPL*AFSPIG
Trigger: ACCAATAGGAGAAAAGGCCCATAAAGGATCAGTATC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATGTACTTCAGTTTTCTaGGTTTTGAAATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITCTSVF*VLKSPG
Trigger: ACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR CAA 72 bp ATAAGCAAAGGGGTACAGAAAGATACTAACAAGGCATaGACTACTTACCTAGGGGGAAGAGAGACATATGTA +
Preference number: 4 (lower is better)
Translates to: ISKGVQKDTNKA*TTYLGGRETYV
Trigger: TACATATGTCTCTCTTCCCCCTAGGTAAGTAGTCAATGCCTTGTTAGTATCTTTCTGTACCCCTTTGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAAACTTTCTATTTCATaGCCTGTGCTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFKLSIS*PVLPSL
Trigger: AAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCAAACTTTCTATTTCATaGCCTGTGCTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSIKLSIS*PVLPSL
Trigger: AAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSKLLFL*VIVKSH
Trigger: GTGACTTTTGACTATGACTCACAAGAACAGAAGCTT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPKLLFL*VIVKSH
Trigger: GTGACTTTTGACTATGACTCACAAGAACAGAAGCTT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFCSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTCAGTACAGCCAAGCTaGAGTAATATCTACGCATTG +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGSVQPS*SNIYAL
Trigger: CAATGCGTAGATATTACTTCAGCTTGGCTGTACTGA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTCAGTACAGCCAAGCTaGAGTAATATCTACGCATTG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESVQPS*SNIYAL
Trigger: CAATGCGTAGATATTACTTCAGCTTGGCTGTACTGA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATATTTTGCTGTGTGTaGAGGAGAACAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEIFCCV*RRTAAE
Trigger: TTCTGCTGCTGTTCTCCTTCACACACAGCAAAATAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGCCATTCAATCAAGGTaGGTGGGATTATTGATAAAT +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSAIQSR*VGLLIN
Trigger: ATTTATCAATAATCCCACTCACCTTGATTGAATGGC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTTCATTATACTAGCCTaGAATTATCCCATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCFIILA*NYPILW
Trigger: CCACAGAATGGGATAATTTCAGGCTAGTATAATGAA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTCACACTTAAAGGTCTaGTCTACAGGCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESHLKV*STGTET
Trigger: TGTTTCAGTGCCTGTAGATCAGACCTTTAAGTGTGA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCACCAAATCAAACACAGTaGTACATCAGCAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPPNQTQ*YISSHK
Trigger: TTTGTGACTGCTGATGTATCACTGTGTTTGATTTGG...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCCCCCAAACTTCTTATaGCTGTATGGTATGTACTTC +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEPPNFL*LYGMYF
Trigger: GAAGTACATACCATACAGTCATAAGAAGTTTGGGGG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAATCTTTAGAATTAGTTaGTGGTGCTGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILREIFRIS*WCWMYV
Trigger: GACATACATCCAGCACCATCAACTAATTCTAAAGAT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTATCTTGGACTGTTGCTaGAGTGGGAAAATTCACATT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSILDCC*SGKIHI
Trigger: AATGTGAATTTTCCCACTGCAGCAACAGTCCAAGAT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCCTGCTACTACACATTTaGTCAAAGGTCAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSLLLHI*SKVSLI
Trigger: AATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAG...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAATCATACTTGTTACCTaGTCAGCAACTGAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPIILVT*SATESV
Trigger: AACTGACTCAGTTGCTGAGCAGGTAACAAGTATGAT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTGGAATTGTGTGTTCTaGATAAGGCCTCATGATATT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFWNCVF*IRPHDI
Trigger: AATATCATGAGGCCTTATCCAGAACACACAATTCCA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CCA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCACCTCTTTCTCCTATTaGTACTATCTTACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSTSFSY*YYLTLQ
Trigger: CTGCAAAGTAAGATAGTACCAATAGGAGAAAGAGGT...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAACCTCTTTCTCCTATTaGTACTATCTTACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILRETSFSY*YYLTLQ
Trigger: CTGCAAAGTAAGATAGTACCAATAGGAGAAAGAGGT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACACTTTCTATTCATAGCTaGAGAGGGATCTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITLSIHS*RGILKN
Trigger: ATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAG...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTGGAACAACAACACATaGCACATATCTAGTACTCTT +
Preference number: 4 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFWNNNT*HISSTL
Trigger: AAGAGTACTAGATATGTGCCATGTGTTGTTGTTCCA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAATCCTATTGGTGCTTATaGATTACTTCCATCAACACT +
Preference number: 4 (lower is better)
Translates to: EGKWKLRCTLSTAFILRESYWCL*ITSINT
Trigger: AGTGTTGATGGAAGTAATCCATAAGCACCAATAGGA...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATGTACTTCAGTTTTCTaGGTTTTGAAATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTCTSVF*VLKSPG
Trigger: ACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGTTTCCTTCATCTATTaGTGCTTCACTACTGTATCC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGVSFIY*CFTTVS
Trigger: GGATACAGTAGTGAAGCATCAATAGATGAAGGAAAC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGTTCTTCTCATTCTCTaGATGCAGTTTCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGVLLIL*MQFPSS
Trigger: AGATGAAGGAAACTGCATTCAGAGAATGAGAAGAAC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSCSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATAATTTATAATCTTTaGGGACTTGGCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEIIYNL*GLGSWG
Trigger: ACCCCAGCTGCCAAGTCCTCAAAGATTATAAATTAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATGTGTGTCCTCAAGTTTaGTGGGAGTCTAACATGTAT +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYVCPQV*WESNMY
Trigger: ATACATGTTAGACTCCCATCAAACTTGAGGACACAC...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACCCAAATCAAACACAGTaGTACATCAGCAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYPNQTQ*YISSHK
Trigger: TTTGTGACTGCTGATGTATCACTGTGTTTGATTTGG...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATACAATGCAAGAGTATTaGTCAGTGAGGAACCTCATG +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYTMQEY*SVRNLM
Trigger: CATGAGGTTCCTCACTGATCAATACTCTTGCATTGT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTTTACCCATTCCATGTaGGTACTAAAACGTAAACAG +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSFTHSM*VLKRKQ
Trigger: CTGTTTACGTTTTAGTACTCACATGGAATGGGTAAA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTGCCCCATATTCTCTTaGTCTCTTCCCAAATATACA +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGCPIFS*SLPKYT
Trigger: TGTATATTTGGGAAGAGATCAAGAGAATATGGGGCA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR GCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACATCTTGGACTGTTGCTaGAGTGGGAAAATTCACATT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYILDCC*SGKIHI
Trigger: AATGTGAATTTTCCCACTGCAGCAACAGTCCAAGAT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTCAGTCTAAACCGAACTaGATAATTTCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: CVKENSSRKQPKPNIISSQSKPN*IISNHL
Trigger: GAGATGATTGGAAATTATGCAGTTCGGTTTAGACTG...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTCATTATAGCTTCAAATaGCTAAGTCCAATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCHYSFK*LSPISQ
Trigger: CTGAGAAATTGGACTTAGGCATTTGAAGCTATAATG...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCACCAATTTATTATCTCTaGATCTGTAGCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPPIYYL*ICSTWN
Trigger: GTTCCAAGTGCTACAGATGCAGAGATAATAAATTGG...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTACTGTATGCAAGAATaGAAACATGCCAGCACCTAT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYYCMQE*KHASTY
Trigger: ATAGGTGCTGGCATGTTTGCATTCTTGCATACAGTA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGGATGTTGTGGTCTTTaGATATGTTCCCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGGCCGL*ICSRFE
Trigger: TTCAAATCGGGAACATATCCAAAGACCACAACATCC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGTCTATGTAGGCAAATaGCAATTTTACGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: GKDFDQFIISASVALGTTVYVGK*QFYANE
Trigger: TTCATTTGCGTAAAATTGCCATTTGCCTACATAGAC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAAACTTTCTATTTCATaGCCTGTGCTTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYKLSIS*PVLPSL
Trigger: AAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATAAGCTTCTGTTCTTGTaGGTCATAGTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYKLLFL*VIVKSH
Trigger: GTGACTTTTGACTATGACTCACAAGAACAGAAGCTT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCAATATCACAGGCAATaGCATTTTCCCTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGQYHRQ*HFPLKI
Trigger: AATCTTCAAGGGAAAATGTCATTGCCTGTGATATTG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCAATATCACAGGCAATaGCATTTTCCCTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEQYHRQ*HFPLKI
Trigger: AATCTTCAAGGGAAAATGTCATTGCCTGTGATATTG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR TCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTGTTCCAATTCAAACTaGGAACTGGATAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYCSNSN*ELDSLH
Trigger: ATGAAGACTATCCAGTTCTCAGTTTGAATTGGAACA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR TCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATATGGTATCAAGCAAATaGTTTAACAAACAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYMVSSK*FNKQPW
Trigger: CCAGGGCTGTTTGTTAAATCATTTGCTTGATACCAT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCAGTCTAAACCGAACTaGATAATTTCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGQSKPN*IISNHL
Trigger: GAGATGATTGGAAATTATGCAGTTCGGTTTAGACTG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGCCTTTGATGGTAACTaGTTGCTTATTCTATTCATC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGAFDGN*LLILFI
Trigger: GATGAATAGAATAAGCAAGCAGTTACCATCAAAGGC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCCAATTTATTATCTCTaGATCTGTAGCACTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGPIYYL*ICSTWN
Trigger: GTTCCAAGTGCTACAGATGCAGAGATAATAAATTGG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACCTGCTACTACACATTTaGTCAAAGGTCAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYLLLHI*SKVSLI
Trigger: AATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAG...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGATCTTGTACAACTATTaGCACCACAGTGACTTTGTT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEILYNY*HHSDFV
Trigger: AACAAAGTCACTGTGGTGGCAATAGTTGTACAAGAT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGATCTTGTACAACTATTaGCACCACAGTGACTTTGTT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGILYNY*HHSDFV
Trigger: AACAAAGTCACTGTGGTGGCAATAGTTGTACAAGAT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCTTTTCTCCTATTGGTaGTTATGGATTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWELFSYW*LWITSI
Trigger: GATGGAAGTAATCCATAAGCACCAATAGGAGAAAAG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCTTTTCTCCTATTGGTaGTTATGGATTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGLFSYW*LWITSI
Trigger: GATGGAAGTAATCCATAAGCACCAATAGGAGAAAAG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAACATATGTATTGGGTaGTCTGTTTGCTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGNICIG*SVCCQI
Trigger: AATTTGGCAGCAAACAGACCACCCAATACATATGTT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAACATATGTATTGGGTaGTCTGTTTGCTGCCAAATT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYNICIG*SVCCQI
Trigger: AATTTGGCAGCAAACAGACCACCCAATACATATGTT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CCA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGTCTATGTAGGCAAATaGCAATTTTACGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPVYVGK*QFYANE
Trigger: TTCATTTGCGTAAAATTGCCATTTGCCTACATAGAC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACTCCTATTGGTGCTTATaGATTACTTCCATCAACACT +
Preference number: 4 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYSYWCL*ITSINT
Trigger: AGTGTTGATGGAAGTAATCCATAAGCACCAATAGGA...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCATTATAGCTTCAAATaGCTAAGTCCAATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEHYSFK*LSPISQ
Trigger: CTGAGAAATTGGACTTAGGCATTTGAAGCTATAATG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR GCA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTCATTATAGCTTCAAATaGCTAAGTCCAATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVHYSFK*LSPISQ
Trigger: CTGAGAAATTGGACTTAGGCATTTGAAGCTATAATG...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CCA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCTTTCTATTCATAGCTaGAGAGGGATCTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWELSIHS*RGILKN
Trigger: ATTTTTCAAGATCCCTCTCCAGCTATGAATAGAAAG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
3UTR CAA 72 bp TCAGCAGTGTATTTCTTCAGTTGTTTGATAAGAGTTTaGCTCACGGAGCATTTAAACTTTATCACACTGTTA +
Preference number: 4 (lower is better)
Translates to: SAVYFFSCLIRV*LTEHLNFITLL
Trigger: TAACAGTGTGATAAAGTTTAAATGCTCCGTGAGCAAAACTCTTATCAAACAACTGAAGAAATACACTGCTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR GCA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATATTTGCTTTGCTCTATaGTCTAAATTGGCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYICFAL*SKLACV
Trigger: AACACAAGCCAATTTAGAGCATAGAGCAAAGCAAAT...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGCAACAGAACAGTCCATaGGGTGGTCTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQQQNSP*GGLFAA
Trigger: GGCAGCAAACAGACCACCCAATGGACTGTTCTGTTG...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGGAGCATCTTGGACTGTaGCTGCAGTGGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQEHLGL*LQWENS
Trigger: TGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTC...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp AGGATACTTCACACTATTCAAGGTAAGTACACAACCACCACCACCACCACCACCAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: RILHTIQGKYTTTTTTTTSDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...GGTGGTGGTGGTGGTGGTGGTTGTGTACTTACCTTGAATAGTGTGAAGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACCTGGGGCCACTTTGTaGAACCACCCAGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPPGATL*NHPVVR
Trigger: CCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGCCTTCACTTGGGCACTaGTTATATGAGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQPSLGH*LYEHLG
Trigger: TCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGG...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGCTGCAGTGCTGTCACTaGGAACATCTTCTTCATATC +
Preference number: 5 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQLQCCH*EHLLHI
Trigger: GATATGAAGAAGATGTTCCAAGTGACAGCACTGCAG...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp CAGATGGGGAGAACCACTGTCATCCTGATATGGTGGTGGCTGCAATTCATCCAGTGTACTTGCCATGAGTaGCCACCTGTCCTGTTATAT +
Preference number: 5 (lower is better)
Translates to: QMGRTTVILIWWWLQFIQCTCHE*PPVLLY
Trigger: ATATAACAGGACAGGTGGCAACTCATGGCAAGTACA...CTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS TCA 90 bp CAGCCCATGAGTTGCCACCTGTCCTGTTATATGTTGGGATGTCTGTaGCAGCTGTCACTGTTACCAGAAGCTTCTGTTCTTGTGAGTCAT +
Preference number: 5 (lower is better)
Translates to: QPMSCHLSCYMLGCL*QLSLLPEASVLVSH
Trigger: ATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS CCA 90 bp AGATACTTTCCTGGGGCCACTTTGTTGAACCACCCAGTTGTCAGGTaGCTCCTTCTAAGGAAGCATAGACAGTTGTTGGTGTCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: RYFPGATLLNHPVVR*LLLRKHRQLLVSKD
Trigger: ATCCTTTGACACCAACAACTGTCTATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGGAAAGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACACACTGCAGCCTTGACTaGCCAGGCTCCAGCGATTCT +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTHCSLD*PGSSDS
Trigger: AGAATCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTG...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCSGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp TCCAGTGTGCCATATTTAGCTTCTGGCTCAGGATCAAAAGGTTTAGGAAGCTGCCTGTGCTTCCTTCACTaGGGCACTTGTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: SSVPYLASGSGSKGLGSCLCFLH*GTCYMS
Trigger: GCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAG...GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACAACCGTCAGAAGGAGGTaGGCACACTCAGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITTVRRR*AHSETD
Trigger: GTCAGTTTCTGAGTGTGCCAACCTCCTTCTGACGGT...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPSGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACCAAGCATAGTTCCTTaGTCTAGAATCTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPPSIVP*SRICQW
Trigger: CCACTGGCAGATTCTAGACAAAGGAACTATGCTTGG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTCAACAGAACAGTCCATaGGGTGGTCTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCQQNSP*GGLFAA
Trigger: GGCAGCAAACAGACCACCCAATGGACTGTTCTGTTG...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCCTGGGGCCACTTTGTaGAACCACCCAGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGPGATL*NHPVVR
Trigger: CCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCCTGGGGCCACTTTGTaGAACCACCCAGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEPGATL*NHPVVR
Trigger: CCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCTTTCCTGGGGCCACTTaGTTGAACCACCCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSFPGAT*LNHPVV
Trigger: GACAACTGGGTGGTTCAACAAAGTGGCCCCAGGAAA...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCACTGCAGCCTTGACTaGCCAGGCTCCAGCGATTCT +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEHCSLD*PGSSDS
Trigger: AGAATCGCTGGAGCCTGGCAAGTCAAGGCTGCAGTG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHCYMSI*DCCCSG
Trigger: CCCACTGCAGCAACAGTCCAAGATGCTCATATAACA...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCACCTTCACTTGGGCACTaGTTATATGAGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPPSLGH*LYEHLG
Trigger: TCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGG...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCATGTACTTGCCATGAGTaGCCACCTGTCCTGTTATAT +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPCTCHE*PPVLLY
Trigger: ATATAACAGGACAGGTGGCAACTCATGGCAAGTACA...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSSDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAACCGTCAGAAGGAGGTaGGCACACTCAGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPTVRRR*AHSETD
Trigger: GTCAGTTTCTGAGTGTGCCAACCTCCTTCTGACGGT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: EGKWKLRCTLSTAFILRESGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFSGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTCCAAGCATAGTTCCTTaGTCTAGAATCTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCPSIVP*SRICQW
Trigger: CCACTGGCAGATTCTAGACAAAGGAACTATGCTTGG...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCCCAAGCATAGTTCCTTaGTCTAGAATCTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSPSIVP*SRICQW
Trigger: CCACTGGCAGATTCTAGACAAAGGAACTATGCTTGG...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGAGCATCTTGGACTGTaGCTGCAGTGGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFEHLGL*LQWENS
Trigger: TGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCCYMSI*DCCCSG
Trigger: CCCACTGCAGCAACAGTCCAAGATGCTCATATAACA...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFCYMSI*DCCCSG
Trigger: CCCACTGCAGCAACAGTCCAAGATGCTCATATAACA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSICYMSI*DCCCSG
Trigger: CCCACTGCAGCAACAGTCCAAGATGCTCATATAACA...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCTGTGCTTCCTTCACTaGGGCACTTGTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFLCFLH*GTCYMS
Trigger: GCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACCTGCAGTGCTGTCACTaGGAACATCTTCTTCATATC +
Preference number: 5 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHLQCCH*EHLLHI
Trigger: GATATGAAGAAGATGTTCCAAGTGACAGCACTGCAG...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTGACTTGGTCTCTTaGGATCAGGCGAAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGSDLVS*DQAKAE
Trigger: CTCCGCTTTCGCCTGATCCAAAGAGACCAAGTCACT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTTTCCTGGGGCCACTTaGTTGAACCACCCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEFPGAT*LNHPVV
Trigger: GACAACTGGGTGGTTCAACAAAGTGGCCCCAGGAAA...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTTTCCTGGGGCCACTTaGTTGAACCACCCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGFPGAT*LNHPVV
Trigger: GACAACTGGGTGGTTCAACAAAGTGGCCCCAGGAAA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAAACTTAACATATGTATaGGGTGGTCTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPNLTYV*GGLFAA
Trigger: GGCAGCAAACAGACCACCCAATACATATGTTAAGTT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGTCACAGCCCATGAGTaGCCACCTGTCCTGTTATAT +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSVTAHE*PPVLLY
Trigger: ATATAACAGGACAGGTGGCAACTCATGGGCTGTGAC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CAA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACCTGTTAACCATCACTTaGGAGGGCAGAGACAATGTT +
Preference number: 5 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHLLTIT*EGRDNV
Trigger: AACATTGTCTCTGCCCTCCAAAGTGATGGTTAACAG...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAGCTGCTACTACACATTaGCTCAAAGGTCAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPAATTH*LKGQSY
Trigger: ATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAGC...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATGTGCAACAGCTACTCTGGTCTCCCCTCACACAACAAATGTCACATAATTACATTTGCTGTTCCTTTCTaGGCAGAAATGGCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: MCNSYSGLPSHNKCHIITFAVPF*AEMASV
Trigger: AACTGAGGCCATTTCTGCCAAGAAAGGAACAGCAAA...TGTAATTATGTGACATTTGTTGTGTGAGGGGAGACCAGAGTAGCTGTTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 90 bp GGATATGTTCCCGATTTGAATTTCAACCAACTCCTCACATCTCTCTaGTGGGGTACAGTAATAGAACAGAAGTCAATGGGAGATCAGCAT +
Preference number: 5 (lower is better)
Translates to: GYVPDLNFNQLLTSL*WGTVIEQKSMGDQH
Trigger: ATGCTGATCTCCCATTGACTTCTGTTCTATTACTGTACCCCATCAGAGAGATGTGAGGAGTTGGTTGAAATTCAAATCGGGAACATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS TCA 90 bp GGCCTCATGATATTTACCCAGCGCTTCATCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTCCATGTAGGAATTATCTTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GLMIFTQRFIFTFRG*TMLIFVHVGIIFFW
Trigger: CCAGAAAAAGATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGAGCATCTTGGACTGTaGCTGCAGTGGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSEHLGL*LQWENS
Trigger: TGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCCTTCACTTGGGCACTaGTTATATGAGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFPSLGH*LYEHLG
Trigger: TCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCACTGTGCTTCCTTCACTaGGGCACTTGTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPLCFLH*GTCYMS
Trigger: GCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAG...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCCTGCAGTGCTGTCACTaGGAACATCTTCTTCATATC +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFLQCCH*EHLLHI
Trigger: GATATGAAGAAGATGTTCCAAGTGACAGCACTGCAG...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGGCATTTTCGCTAGGTaGGATGAAACTGCTTTACCA +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFGIFAR*DETALP
Trigger: TGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGCC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTAGCCACTCATCATACTaGTTACCTGCTCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSSHSSY*LPAQQL
Trigger: CAGTTGCTGAGCAGGTAACAAGTATGATGAGTGGCT...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAGTGGTAGTCTGGAATaGTGTGTTCTGGATAAGGCC +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWESGSLE*CVLDKA
Trigger: GGCCTTATCCAGAACACACAATTCCAGACTACCACT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGCCAAGCATAGTTCCTTaGTCTAGAATCTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEPSIVP*SRICQW
Trigger: CCACTGGCAGATTCTAGACAAAGGAACTATGCTTGG...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGAGCATCTTGGACTGTaGCTGCAGTGGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGEHLGL*LQWENS
Trigger: TGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTGTTATATGAGCATCTaGGACTGTTGCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGCYMSI*DCCCSG
Trigger: CCCACTGCAGCAACAGTCCAAGATGCTCATATAACA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCATGTACTTGCCATGAGTaGCCACCTGTCCTGTTATAT +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPCTCHE*PPVLLY
Trigger: ATATAACAGGACAGGTGGCAACTCATGGCAAGTACA...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTGGATATGTTCCCGATTaGAATTTCAACCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCGYVPD*NFNQLL
Trigger: GAGGAGTTGGTTGAAATTCAAATCGGGAACATATCC...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTGGTGTCAAAGGATGTaGTGGTCTTTGGATATGTTC +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFWCQRM*WSLDMF
Trigger: GAACATATCCAAAGACCACAACATCCTTTGACACCA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAAGCATAGACAGTTGTaGGTGTCAAAGGATGTTGTG +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFKHRQL*VSKDVV
Trigger: CACAACATCCTTTGACACCAACAACTGTCTATGCTT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTAGGAAGCATAGACAGTaGTTGGTGTCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCRKHRQ*LVSKDV
Trigger: AACATCCTTTGACACCAACAACTGTCTATGCTTCCT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAACTTAACATATGTATaGGGTGGTCTGTTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EGKWKLRCTLSTAFILRENLTYV*GGLFAA
Trigger: GGCAGCAAACAGACCACCCAATACATATGTTAAGTT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CAA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTATAAATGCCAGTCGATaGCCATATTTGGACTATATC +
Preference number: 5 (lower is better)
Translates to: ECRPHEGKDFDQFIISASINASR*PYLDYI
Trigger: GATATAGTCCAAATATGGCAATCGACTGGCATTTAT...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAATAAAATGTAGATTATaGGGCTCCCTTCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTIKCRL*GSLPGQ
Trigger: TTGGCCTGGAAGGGAGCCCAATAATCTACATTTTAT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAGCTGCTACTACACATTaGCTCAAAGGTCAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTAATTH*LKGQSY
Trigger: ATAAGACTGACCTTTGAGCAAATGTGTAGTAGCAGC...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGGCTGCTGTATTAACTaGCTATTTGAAACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: ECRPHEGKDFDQFIISASGCCIN*LFETKD
Trigger: ATCCTTTGTTTCAAATAGCAAGTTAATACAGCAGCC...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp ATAAACCCCATAATTCCAGGTTTAGAGGCTCCCATAAATGCCAGTCGATTGCCAATAATGTCAAACATCTaGTACAACTATTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: INPIIPGLEAPINASRLPIMSNI*YNYCHH
Trigger: GTGGTGGCAATAGTTGTACAAGATGTTTGACATTAT...TGGCAATCGACTGGCATTTATGGGAGCCTCTAAACCTGGAATTATGGGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGGGCCTTTTCTCCTATaGGTGCTTATGGATTACTTC +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPGPFLL*VLMDYF
Trigger: GAAGTAATCCATAAGCACCAATAGGAGAAAAGGCCC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATCAGTTTTCTGGGTTTaGAAATCACCTGGTTACAGC +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTSVFWV*KSPGYS
Trigger: GCTGTAACCAGGTGATTTCAAAACCCAGAAAACTGA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGAACACTCATTCCCTTaGGATGCTTTACTTTTAACA +
Preference number: 5 (lower is better)
Translates to: ECRPHEGKDFDQFIISASEHSFP*DALLLT
Trigger: TGTTAAAAGTAAAGCATCCAAAGGGAATGAGTGTTC...AGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAAGTTTCCTTCATCTATaGATGCTTCACTACTGTATC +
Preference number: 5 (lower is better)
Translates to: LECRPHEGKDFDQFIISASFLHL*MLHYCI
Trigger: GATACAGTAGTGAAGCATCAATAGATGAAGGAAACT...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCCTTCACTTGGGCACTaGTTATATGAGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGPSLGH*LYEHLG
Trigger: TCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGCTGCAGTGCTGTCACTaGGAACATCTTCTTCATATC +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGLQCCH*EHLLHI
Trigger: GATATGAAGAAGATGTTCCAAGTGACAGCACTGCAG...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTCTGCAGTGCTGTCACTaGGAACATCTTCTTCATATC +
Preference number: 5 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVLQCCH*EHLLHI
Trigger: GATATGAAGAAGATGTTCCAAGTGACAGCACTGCAG...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGTGTACTTGCCATGAGTaGCCACCTGTCCTGTTATAT +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGCTCHE*PPVLLY
Trigger: ATATAACAGGACAGGTGGCAACTCATGGCAAGTACA...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTGGATATGTTCCCGATTaGAATTTCAACCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSGYVPD*NFNQLL
Trigger: GAGGAGTTGGTTGAAATTCAAATCGGGAACATATCC...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp TGTGTGAAGGAGAACAGCAGCAGAAAGCAACCCAAACCAAATATAATATCTAGTTGGTGTCAAAGGATGTaGTGGTCTTTGGATATGTTC +
Preference number: 5 (lower is better)
Translates to: CVKENSSRKQPKPNIISSWCQRM*WSLDMF
Trigger: GAACATATCCAAAGACCACAACATCCTTTGACACCA...ACTAGATATTATATTTGGTTTGGGTTGCTTTCTGCTGCTGTTCTCCTTCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCAAAGCCAGGGCACCTTaGCCTTTACAAATGAATATA +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFKARAP*PLQMNI
Trigger: TATATTCATTTGTAAAGGCAAAGGTGCCCTGGCTTT...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GAGGGGAAATGGAAACTCAGATGTACCTTATCCACAGCATTTATTCTGAGAGAAAAAGCCAGGGCACCTTaGCCTTTACAAATGAATATA +
Preference number: 5 (lower is better)
Translates to: EGKWKLRCTLSTAFILREKARAP*PLQMNI
Trigger: TATATTCATTTGTAAAGGCAAAGGTGCCCTGGCTTT...TTCTCTCAGAATAAATGCTGTGGATAAGGTACATCTGAGTTTCCATTTCCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGGCATTTTCGCTAGGTaGGATGAAACTGCTTTACCA +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEGIFAR*DETALP
Trigger: TGGTAAAGCAGTTTCATCCAACCTAGCGAAAATGCC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCGATCTTGAAAAATACTaGGTGGTGACCACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFDLEKY*VVTTVL
Trigger: AAGAACAGTGGTCACCACCAAGTATTTTTCAAGATC...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCAGAGTCTAACATGTATTaGTTCTTTAAGACCCAACTC +
Preference number: 5 (lower is better)
Translates to: LECRPHEGKDFDQFIISAESNMY*FFKTQL
Trigger: GAGTTGGGTCTTAAAGAACAAATACATGTTAGACTC...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TTAGAATGTAGGCCCCATGAGGGCAAAGACTTCGACCAATTTATTATCTCTGCATTTTACATTTTGTTCTaGGAAAGAACGTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LECRPHEGKDFDQFIISAFYILF*ERTCVL
Trigger: GAGGACACACGTTCTTTCCAAGAACAAAATGTAAAA...TGCAGAGATAATAAATTGGTCGAAGTCTTTGCCCTCATGGGGCCTACATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AATCAGTTTCCTTCCTGCTCCCAGCCCACACAACATAATTTTAGGATACTTCACTCTGGAGGTGGAGTTTaGGAATACAAGTTAAATTTC +
Preference number: 5 (lower is better)
Translates to: NQFPSCSQPTQHNFRILHSGGGV*EYKLNF
Trigger: GAAATTTAACTTGTATTCCAAAACTCCACCTCCAGA...GTGAAGTATCCTAAAATTATGTTGTGTGGGCTGGGAGCAGGAAGGAAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGGGCCTTTTCTCCTATaGGTGCTTATGGATTACTTC +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEGPFLL*VLMDYF
Trigger: GAAGTAATCCATAAGCACCAATAGGAGAAAAGGCCC...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACATACAATGCAAGAGTATaGATCAGTGAGGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTYNARV*ISEEPH
Trigger: ATGAGGTTCCTCACTGATCAATACTCTTGCATTGTA...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTACAATGCAAGAGTATaGATCAGTGAGGAACCTCAT +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFYNARV*ISEEPH
Trigger: ATGAGGTTCCTCACTGATCAATACTCTTGCATTGTA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GGTCTTTTTCTCACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCTTTCATCTTTACTCTTaGCTGTTCCTTTCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GLFLTKSESTKLVLLMCFFHLYS*LFLSWQ
Trigger: CTGCCAAGAAAGGAACAGCAAAGAGTAAAGATGAAA...GAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGTGAGAAAAAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp TTTCTATTTCATGACCTGTGCTTCCTTCACTTGGGCACTTGTTATATGAGCATCAGTTTCCTTCATCTATaGATGCTTCACTACTGTATC +
Preference number: 5 (lower is better)
Translates to: FLFHDLCFLHLGTCYMSISFLHL*MLHYCI
Trigger: GATACAGTAGTGAAGCATCAATAGATGAAGGAAACT...GATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637945.1
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAAGCATAGACAGTTGTaGGTGTCAAAGGATGTTGTG +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEKHRQL*VSKDVV
Trigger: CACAACATCCTTTGACACCAACAACTGTCTATGCTT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGGAAGCATAGACAGTaGTTGGTGTCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGRKHRQ*LVSKDV
Trigger: AACATCCTTTGACACCAACAACTGTCTATGCTTCCT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS-3UTR CAA 90 bp ACTAAGAGTGAAAGCACCAAGCTGGTCTTACTAATGTGTTTCACTAAGCTCTGTATAAATGCCAGTCGATaGCCATATTTGGACTATATC +
Preference number: 5 (lower is better)
Translates to: TKSESTKLVLLMCFTKLCINASR*PYLDYI
Trigger: GATATAGTCCAAATATGGCAATCGACTGGCATTTAT...ACAGAGCTTAGTGAAACACATTAGTAAGACCAGCTTGGTGCTTTCACTCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GGCAAAGACTTCGACCAATTTATTATCTCTGCATCTGTAGCACTTGGAACAACAATAAATGCCAGTCGATaGCCATATTTGGACTATATC +
Preference number: 5 (lower is better)
Translates to: GKDFDQFIISASVALGTTINASR*PYLDYI
Trigger: GATATAGTCCAAATATGGCAATCGACTGGCATTTAT...TGTTGTTCCAAGTGCTACAGATGCAGAGATAATAAATTGGTCGAAGTCTTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCGAGTCTAACATGTATTaGTTCTTTAAGACCCAACTC +
Preference number: 5 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSESNMY*FFKTQL
Trigger: GAGTTGGGTCTTAAAGAACAAATACATGTTAGACTC...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGATAAAATGTAGATTATaGGGCTCCCTTCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGIKCRL*GSLPGQ
Trigger: TTGGCCTGGAAGGGAGCCCAATAATCTACATTTTAT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTCAGTTTTCTGGGTTTaGAAATCACCTGGTTACAGC +
Preference number: 5 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVSVFWV*KSPGYS
Trigger: GCTGTAACCAGGTGATTTCAAAACCCAGAAAACTGA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AAATTATGCCAAACCTTTGTTAGACGAATAATCAGTTTCCTTCCTGCTCCCAGCTGTTTGATAAGAGTTTaGCTCACGGAGCATTTAAAC +
Preference number: 5 (lower is better)
Translates to: KLCQTFVRRIISFLPAPSCLIRV*LTEHLN
Trigger: GTTTAAATGCTCCGTGAGCAAAACTCTTATCAAACA...GCTGGGAGCAGGAAGGAAACTGATTATTCGTCTAACAAAGGTTTGGCATAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCATGGCCTCAGTTTTCTTaGGTTTTATGTCTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPWPQFS*VLCLRS
Trigger: TGAACGAAGACATAAAACCAAAGAAAACTGAGGCCA...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATGGATATGTTCCCGATTaGAATTTCAACCAACTCCTC +
Preference number: 5 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYGYVPD*NFNQLL
Trigger: GAGGAGTTGGTTGAAATTCAAATCGGGAACATATCC...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CAA 90 bp CCATCTCTTCCAAACAGCTTTAAAGATTCCTCAAAATCGTTGCCACTATATTATTGGTGTCAAAGGATGTaGTGGTCTTTGGATATGTTC +
Preference number: 5 (lower is better)
Translates to: PSLPNSFKDSSKSLPLYYWCQRM*WSLDMF
Trigger: GAACATATCCAAAGACCACAACATCCTTTGACACCA...ATAATATAGTGGCAACGATTTTGAGGAATCTTTAAAGCTGTTTGGAAGAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399639.6
CDS-3UTR CAA 90 bp CATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGAAAGCCAGGGCACCTTaGCCTTTACAAATGAATATA +
Preference number: 5 (lower is better)
Translates to: HTFCLLGSNNYLLQLIWEKARAP*PLQMNI
Trigger: TATATTCATTTGTAAAGGCAAAGGTGCCCTGGCTTT...CTCCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGGATCTTGAAAAATACTaGGTGGTGACCACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGDLEKY*VVTTVL
Trigger: AAGAACAGTGGTCACCACCAAGTATTTTTCAAGATC...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAGGCTGCTGTATTAACTaGCTATTTGAAACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPGCCIN*LFETKD
Trigger: ATCCTTTGTTTCAAATAGCAAGTTAATACAGCAGCC...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp AGACAGAATTTCCTGGAGAGCTTAATAAAATGTAGATTATTGGGCTCCCTTCCAATAATGTCAAACATCTaGTACAACTATTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RQNFLESLIKCRLLGSLPIMSNI*YNYCHH
Trigger: GTGGTGGCAATAGTTGTACAAGATGTTTGACATTAT...TGGAAGGGAGCCCAATAATCTACATTTTATTAAGCTCTCCAGGAAATTCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAGTACTTTCAAGTTCTaGACAAATAGATCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYSTFKF*TNRSSP
Trigger: AGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACATGCCCCATATTCTCTaGATCTCTTCCCAAATATAC +
Preference number: 5 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYMPHIL*ISSQIY
Trigger: GTATATTTGGGAAGAGATCAAGAGAATATGGGGCAT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS-3UTR CAA 90 bp GACATACATTTTGTTTACTGGGCAGCAATAATTATCTTTTGCAGCTCATTTGGGAGTTTCCTTCATCTATaGATGCTTCACTACTGTATC +
Preference number: 5 (lower is better)
Translates to: DIHFVYWAAIIIFCSSFGSFLHL*MLHYCI
Trigger: GATACAGTAGTGAAGCATCAATAGATGAAGGAAACT...CCCAAATGAGCTGCAAAAGATAATTATTGCTGCCCAGTAAACAAAATGTATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
ENST00000637265.1
CDS-3UTR CAA 90 bp TATGACTGTATGGTATGTACTTCAGTTTTCTGGGTTTTGAAATCACCTGGTTACAGTTTCCTTCATCTATaGATGCTTCACTACTGTATC +
Preference number: 5 (lower is better)
Translates to: YDCMVCTSVFWVLKSPGYSFLHL*MLHYCI
Trigger: GATACAGTAGTGAAGCATCAATAGATGAAGGAAACT...GTAACCAGGTGATTTCAAAACCCAGAAAACTGAAGTACATACCATACAGTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTCTGGAGGTGGAGTTTaGGAATACAAGTTAAATTTC +
Preference number: 5 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVSGGGV*EYKLNF
Trigger: GAAATTTAACTTGTATTCCAAAACTCCACCTCCAGA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS-3UTR CAA 90 bp TGGAGACAATTCAAGACCAAGGAAAAGGTTAATCAGCAGTGTATTTCTTCAGTTTGTTTGATAAGAGTTTaGCTCACGGAGCATTTAAAC +
Preference number: 5 (lower is better)
Translates to: WRQFKTKEKVNQQCISSVCLIRV*LTEHLN
Trigger: GTTTAAATGCTCCGTGAGCAAAACTCTTATCAAACA...AACTGAAGAAATACACTGCTGATTAACCTTTTCCTTGGTCTTGAATTGTCTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399639.6
ENST00000637265.1
CDS TCA 90 bp ATTCCTACTCCAATTGTTTTACATCTGTCAGTACTTTCAAGTTCTTaGCAAATAGATCCAGCCCTTGTATTCTGTCTGATAACTGATATC +
Preference number: 5 (lower is better)
Translates to: IPTPIVLHLSVLSSS*QIDPALVFCLITDI
Trigger: GATATCAGTTATCAGACAGAATACAAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACTGACAGATGTAAAACAATTGGAGTAGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS CCA 72 bp CCTGGGGCCACTTTGTTGAACCACCCAGTTGTCAGGTaGCTCCTTCTAAGGAAGCATAGACAGTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PGATLLNHPVVR*LLLRKHRQLLV
Trigger: CACCAACAACTGTCTATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTGGTTCAACAAAGTGGCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS TCA 72 bp CCCCAACAGCAGTGGTCAAATCCTCTACAGCACTACTaGTTGTGTCTACTAGAGAGGACACTGAAGGCAGAT +
Preference number: 6 (lower is better)
Translates to: PQQQWSNPLQHY*LCLLERTLKAD
Trigger: ATCTGCCTTCAGTGTCCTCTCTAGTAGACACAATCAGTAGTGCTGTAGAGGATTTGACCACTGCTGTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 72 bp TTACCTGCTCAGCAACTGAGTCAGTTAAAGCATAGCTaGCCTCCCCAACAGCAGTGGTCAAATCCTCTACAG +
Preference number: 6 (lower is better)
Translates to: LPAQQLSQLKHS*PPQQQWSNPLQ
Trigger: CTGTAGAGGATTTGACCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTGACTCAGTTGCTGAGCAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS CCA 72 bp GTCTACAGCTTCTTCTGCTACAGAGCTTTCCTCTTCTaGGCGAAAGCCACTCATCATACTTGTTACCTGCTC +
Preference number: 6 (lower is better)
Translates to: VYSFFCYRAFLF*AKATHHTCYLL
Trigger: GAGCAGGTAACAAGTATGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS CAA 90 bp CACCCAGTTGTCAGGTGGCTCCTTCTAAGGAAGCATAGACAGTTGTaGGTGTCAAAGGATGTTGTGGTCTTTGGATATGTTCCCGATTTG +
Preference number: 6 (lower is better)
Translates to: HPVVRWLLLRKHRQL*VSKDVVVFGYVPDL
Trigger: CAAATCGGGAACATATCCAAAGACCACAACATCCTTTGACACCAACAACTGTCTATGCTTCCTTAGAAGGAGCCACCTGACAACTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS CAA 72 bp AGCTTTCCTCTTCTGGGCGAAAGCCACTCATCATACTaGTTACCTGCTCAGCAACTGAGTCAGTTAAAGCAT +
Preference number: 6 (lower is better)
Translates to: SFPLLGESHSSY*LPAQQLSQLKH
Trigger: ATGCTTTAACTGACTCAGTTGCTGAGCAGGTAACAAGTATGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 72 bp CCCGATTTGAATTTCAACCAACTCCTCACATCTCTCTaGTGGGGTACAGTAATAGAACAGAAGTCAATGGGA +
Preference number: 6 (lower is better)
Translates to: PDLNFNQLLTSL*WGTVIEQKSMG
Trigger: TCCCATTGACTTCTGTTCTATTACTGTACCCCATCAGAGAGATGTGAGGAGTTGGTTGAAATTCAAATCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS TCA 72 bp CAAAGGATGTTGTGGTCTTTGGATATGTTCCCGATTTaGATTTCAACCAACTCCTCACATCTCTCTGATGGG +
Preference number: 6 (lower is better)
Translates to: QRMLWSLDMFPI*ISTNSSHLSDG
Trigger: CCCATCAGAGAGATGTGAGGAGTTGGTTGAAATTCAAATCGGGAACATATCCAAAGACCACAACATCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367015.5
ENST00000399639.6
ENST00000537238.5
CDS TCA 72 bp ATATTTACCCAGCGCTTCATCTTCACTTTCAGAGGATaGACCATGCTCATCTTTGTCCATGTAGGAATTATC +
Preference number: 6 (lower is better)
Translates to: IFTQRFIFTFRG*TMLIFVHVGII
Trigger: GATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 72 bp ACAAATAGATCCAGCCCTTGTATTCTGTCTGATAACTaGTATCCCACCATTATTCATGTAGCCTTTCAAAGA +
Preference number: 6 (lower is better)
Translates to: TNRSSPCILSDN*YPTIIHVAFQR
Trigger: TCTTTGAAAGGCTACATGAATAATGGTGGGATATCAGTTATCAGACAGAATACAAGGGCTGGATCTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 72 bp CCAATTGTTTTACATCTGTCAGTACTTTCAAGTTCTTaGCAAATAGATCCAGCCCTTGTATTCTGTCTGATA +
Preference number: 6 (lower is better)
Translates to: PIVLHLSVLSSS*QIDPALVFCLI
Trigger: TATCAGACAGAATACAAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACTGACAGATGTAAAACAATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637265.1
CDS TCA 72 bp CCTTTCAAAGAAGAATCACCAGTATTACCAGTGTCTTaGTATTCTGATAGAGTTTGTTGCCTATCATTAACA +
Preference number: 6 (lower is better)
Translates to: PFKEESPVLPVS*YSDRVCCLSLT
Trigger: TGTTAATGATAGGCAACAAACTCTATCAGAATATCAAGACACTGGTAATACTGGTGATTCTTCTTTGAAAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637265.1