RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT12 (Homo sapiens)

Ensembl gene IDs: ENSG00000173227

Ensembl transcript IDs: ENST00000393946.6, ENST00000525149.1, ENST00000525457.5, ENST00000526281.1, ENST00000527043.6, ENST00000531392.1, ENST00000533427.1

Found 690 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCATTCAGTCTTCTCCTGGCGTCCCTCAAGCCGCCCTTCCACCCTaGCCTTCCCCGGCTTCCCATCAGGCCTCAGCCACCTGGGCTGTC +
Preference number: 1 (lower is better)
Translates to: GIQSSPGVPQAALPP*PSPASHQASATWAV
Trigger: GACAGCCCAGGTGGCTGAGGCCTGATGGGAAGCCGGGGAAGGCCAGGGTGGAAGGGCGGCTTGAGGGACGCCAGGAGAAGACTGAATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp CACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCCCT +
Preference number: 1 (lower is better)
Translates to: HGSSWAMERASDRAE*VPGSSSSIAQLARP
Trigger: AGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR TCA 90 bp TGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTaGGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCG +
Preference number: 1 (lower is better)
Translates to: CSRLQLGYGEGIRQS*VGTGLQQLHCPTGP
Trigger: CGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR TCA 90 bp AGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCCCGTaGTCGAGAGCCGCCTCCTTCCTAGCCTGGCATTCAGTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: RELKLGDPVSGAPTP*SRAASFLAWHSVFS
Trigger: GGAGAAGACTGAATGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGC +
Preference number: 1 (lower is better)
Translates to: VMRTLPGDPSVHGSS*AMERASDRAEWVPG
Trigger: GCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR CCA 90 bp CCCCCAAGATTCACTGGGTTCCAGAACATAGCCCAGCTCGGCAGCTaGCCTACCGGGAGGAGCAGGGTTGAGTCCTCTGTCCTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PPRFTGFQNIAQLGS*PTGRSRVESSVLAQ
Trigger: CTGGGCCAGGACAGAGGACTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAACCCAGTGAATCTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp CAGTGTTCCACGTGGCCGGTAGGCTGCTGCCCGGGCCTGGTCTCTTaGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACT +
Preference number: 1 (lower is better)
Translates to: QCSTWPVGCCPGLVS*SLLRPRERPFLVST
Trigger: AGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGTGGAACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 90 bp GCCCAGCCCGAGAGCCTCCTTGTCCACCACATCTTCGCAGGCACGTaGAGCCCACCAAGACCTCTGCTGTCAGTATTCTCTCTGCCCCAC +
Preference number: 1 (lower is better)
Translates to: AQPESLLVHHIFAGT*SPPRPLLSVFSLPH
Trigger: GTGGGGCAGAGAGAATACTGACAGCAGAGGTCTTGGTGGGCTGCACGTGCCTGCGAAGATGTGGTGGACAAGGAGGCTCTCGGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp GGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTaGGCCTCTTTGGACCTCTGGTTCTTGCCATGGTTGAGGTCCGGG +
Preference number: 1 (lower is better)
Translates to: GLGLVCAGLSTRTWV*ASLDLWFLPWLRSG
Trigger: CCCGGACCTCAACCATGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR TCA 90 bp CTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCCCTCAGAGCCCCCTaGGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCC +
Preference number: 1 (lower is better)
Translates to: LVKEALPVSLALRAP*VHTAGLPSALSRSS
Trigger: GGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGGGCTCTGAGGGCTAGGGAAACAGGAAGGGCCTCTTTGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp CTTCCTGATGCCCTAAGGGCCGGGTCTTCTTCGTGTTACCCCTGCTaGTGCCTAGCACAGTGCCTGGCCCCCAAGATTCACTGGGTTCCA +
Preference number: 1 (lower is better)
Translates to: LPDALRAGSSSCYPC*CLAQCLAPKIHWVP
Trigger: TGGAACCCAGTGAATCTTGGGGGCCAGGCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGAAGACCCGGCCCTTAGGGCATCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 90 bp GGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCTGCCATTaGTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCC +
Preference number: 1 (lower is better)
Translates to: GLRTAFAMGKFTSCH*SGWARCLRHAQFFS
Trigger: GGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 90 bp AAAGGCCCTTCCTTGTATCCACTGCAGTGGGCTGAGAACTGCATTTaGGATGGGGAAGTTCACATCCTGCCATTGCTCAGGCTGGGCCCG +
Preference number: 1 (lower is better)
Translates to: KGPSLYPLQWAENCI*DGEVHILPLLRLGP
Trigger: CGGGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 90 bp CTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTaGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCTGCCA +
Preference number: 1 (lower is better)
Translates to: LFSGPEKGPSLYPLQ*AENCICDGEVHILP
Trigger: TGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 90 bp CCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGGCTGAGAACTaGATTTGCGATGGGGAAGTTCACATCCTGCCATTGCTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: PEKGPSLYPLQWAEN*ICDGEVHILPLLRL
Trigger: CAGCCTGAGCAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 90 bp TTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTaGAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCC +
Preference number: 1 (lower is better)
Translates to: LVSSPAPRKALPCIH*SGLRTAFAMGKFTS
Trigger: GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR TCA 90 bp CGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTCCATCCAGCCTaGGCTCCCTTTCTTGATCTGGTAAGTTTCTCTGAGAACACTCAC +
Preference number: 1 (lower is better)
Translates to: RWILKPHLRGFLHPA*APFLDLVSFSENTH
Trigger: GTGAGTGTTCTCAGAGAAACTTACCAGATCAAGAAAGGGAGCTCAGGCTGGATGGAGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp GGTGTCGGGGGCACCCACCCCGTGATCGAGAGCCGCCTCCTTCCTAGCCTGGCACCACGCCCACTCCTCTaGTGCAATCTGGACAGAGAG +
Preference number: 2 (lower is better)
Translates to: GVGGTHPVIESRLLPSLAPRPLL*CNLDRE
Trigger: CTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGG...TGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCACGTGGCCGGTAGGCTaGTGCCCGGGCCTGGTCTCT +
Preference number: 2 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTTWPVG*CPGLVS
Trigger: AGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGT...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGGCCCAGCTCGGCAGCTaGCCTACCGGGAGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: SPSGPARASTNACRVWAWAQLGS*PTGRSR
Trigger: CCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGC...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCGCCGCCCTTCCACCCTaGCCTTCCCCGGCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTAALPP*PSPASH
Trigger: ATGGGAAGCCGGGGAAGGCCAGGGTGGAAGGGCGGC...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 90 bp CCAGTGTTCCACGTGGCCGGTAGGCTGCTGCCCGGGCCTGGTCTCTaGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCAC +
Preference number: 2 (lower is better)
Translates to: PVFHVAGRLLPGPGL*VSSPAPRKALPCIH
Trigger: GTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGTGGAACACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR TCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGGCCCTCAGAGCCCCCTaGGTCCACACAGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SPSGPARASTNACRVWAWALRAP*VHTAGL
Trigger: CAGCCCAGCTGTGTGGACTCAGGGGGCTCTGAGGGC...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGACTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR-3UTR CCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACCGGGCCTGGTCTCTTaGTCTCTTCTCCGGCCCCGA +
Preference number: 2 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGPGLVS*SLLRPR
Trigger: TCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGG...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR TCA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGACACCAGGCTGGGGATaGCAAGCTCTGCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLTPGWG*QALPAL
Trigger: GAGAGCAGGCAGAGCTTGTCATCCCCAGCCTGGTGT...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSSDRAE*VPGSSS
Trigger: GCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGA...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR-3UTR CCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGTCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMSDRAE*VPGSSS
Trigger: GCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGA...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR-3UTR CCA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGGCTCCAGCTGGGCTATaGAGAGGGCATCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLAPAGL*RGHQTE
Trigger: CTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCTGGTGCCTAGCACAGTaGCTGGCCCCCAAGATTCAC +
Preference number: 2 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTWCLAQ*LAPKIH
Trigger: GTGAATCTTGGGGGCCAGGCACTGTGCTAGGCACCA...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCACAAGGACCTGGGTCTaGGCCTCTTTGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTTRTWV*ASLDLW
Trigger: CCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGT...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGCTCAGTTCTTTTCCTaGCCCTCCAAGCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRAQFFS*PSKHSS
Trigger: GGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGC...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 90 bp GAGGCATCTTTCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTaGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACC +
Preference number: 2 (lower is better)
Translates to: EASFSQWACKGINKC*QGLGLVCAGLSTRT
Trigger: GGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGAAAGATGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTCTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACTCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDSDRAE*VPGSSS
Trigger: GCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGA...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGATCCTCTGCTGCAATCTaGACAGAGAGACCAGGATGG +
Preference number: 2 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGSSAAI*TERPGW
Trigger: CCATCCTGGTCTCTCTGTCCAGATTGCAGCAGAGGA...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 90 bp GCCTGGTCTCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTaGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAA +
Preference number: 2 (lower is better)
Translates to: AWSLGLFSGPEKGPS*YPLQWAENCICDGE
Trigger: TTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGAGACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR TCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCGGGAGGAGCAGGGTTaGGTCCTCTGTCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRREEQG*VLCPGP
Trigger: TGGGCCAGGACAGAGGACTCAACCCTGCTCCTCCCG...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTCGCCCACTCCTCTGCTaGAATCTGGACAGAGAGACC +
Preference number: 2 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPRPLLC*NLDRET
Trigger: GGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCG...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCCTTCCTTGTATCCACTaGAGTGGGCTGAGAACTGCA +
Preference number: 2 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTLPCIH*SGLRTA
Trigger: TGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAG...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCAAGGGCATCAACAAATaGTTGCAGGGTCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: DFASRELKLGDPVSGAPTKGINK*LQGLGL
Trigger: CAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTT...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTATCTTCGCAGGCACGTaGAGCCCACCAAGACCTCTG +
Preference number: 2 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPIFAGT*SPPRPL
Trigger: CAGAGGTCTTGGTGGGCTGCACGTGCCTGCGAAGAT...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCA +
Preference number: 2 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDVHGSS*AMERAS
Trigger: TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACTCGTGTTACCCCTGCTaGTGCCTAGCACAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDSCYPC*CLAQCL
Trigger: CAGGCACTGTGCTAGGCACCAGCAGGGGTAACACGA...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGTCTTCGTGTTACCCCTaGTGGTGCCTAGCACAGTGC +
Preference number: 2 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVSSCYP*WCLAQC
Trigger: GCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGA...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTTCTTCGTGTTACCCCTaGTGGTGCCTAGCACAGTGC +
Preference number: 2 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPSSCYP*WCLAQC
Trigger: GCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGA...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACGCTCAGTTCTTTTCCTaGCCCTCCAAGCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDAQFFS*PSKHSS
Trigger: GGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGC...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR GCA 90 bp AAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGGGAACTCACTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: KKLLAPESPSQISLLGNSLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...TGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCACAGAGAGACCAGGATaGGTCATGAGGACTCTGCCA +
Preference number: 2 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSTERPG*VMRTLP
Trigger: TGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTGCCTCTTTGGACCTCTaGTTCTTGCCATGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPASLDL*FLPWLR
Trigger: CCTCAACCATGGCAAGAACCAGAGGTCCAAAGAGGC...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTTTGTATCCACTGCAGTaGGCTGAGAACTGCATTTGC +
Preference number: 2 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTLYPLQ*AENCIC
Trigger: GCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CAA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: PLSPHSWAAISTEQILRGAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CAA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGCCCGGGCCTGGTCTCTaGGTCTCTTCTCCGGCCCCG +
Preference number: 3 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRPGPGL*VSSPAP
Trigger: CGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGG...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR TCA 72 bp AAGCTAGGAGACCCGGTGTCGGGGGCACCCACCCCGTaGTCGAGAGCCGCCTCCTTCCTAGCCTGGCATTCA +
Preference number: 3 (lower is better)
Translates to: KLGDPVSGAPTP*SRAASFLAWHS
Trigger: TGAATGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACCGGGTCTCCTAGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp TCCAGCCATGTGTCTCCTGGCCCTGGGCTGACCTCCTaGTGTGGCCATAGGGTAGACAGCCTGGCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: SSHVSPGPGLTS*CGHRVDSLALG
Trigger: CCCCAAGGCCAGGCTGTCTACCCTATGGCCACAGCAGGAGGTCAGCCCAGGGCCAGGAGACACATGGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CAA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: DFASRELKLGDPVSGAPTAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CAA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: SVHGSSWAMERASDRAEWAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR TCA 72 bp CTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTaGGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCA +
Preference number: 3 (lower is better)
Translates to: LQLGYGEGIRQS*VGTGLQQLHCP
Trigger: TGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR CCA 72 bp ACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGG +
Preference number: 3 (lower is better)
Translates to: TLPGDPSVHGSS*AMERASDRAEW
Trigger: CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR CCA 72 bp CAGGCCCCTGCCCCCACAGCGATCAGGCCAAGGCGATaGATCTTGAAGCCACACTTGCGTGGCTTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: QAPAPTAIRPRR*ILKPHLRGFLH
Trigger: ATGGAGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTGGGGGCAGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR-3UTR CAA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGTTGGACCTCTGGTTCTaGCCATGGTTGAGGTCCGGG +
Preference number: 3 (lower is better)
Translates to: QPFPALSHEGKKRLPGTALDLWF*PWLRSG
Trigger: CCCGGACCTCAACCATGGCAAGAACCAGAGGTCCAA...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 72 bp AGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTG +
Preference number: 3 (lower is better)
Translates to: SWAMERASDRAE*VPGSSSSIAQL
Trigger: CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
3UTR CCA 72 bp TTCACTGGGTTCCAGAACATAGCCCAGCTCGGCAGCTaGCCTACCGGGAGGAGCAGGGTTGAGTCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: FTGFQNIAQLGS*PTGRSRVESSV
Trigger: GACAGAGGACTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAACCCAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp ACTGCATTTGCGATGGGGAAGTTCACATCCTGCCATTaGTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAG +
Preference number: 3 (lower is better)
Translates to: TAFAMGKFTSCH*SGWARCLRHAQ
Trigger: CTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp TGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTaGCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAG +
Preference number: 3 (lower is better)
Translates to: WARCLRHAQFFS*PSKHSSYLVKE
Trigger: CTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp TCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTaGAGTGGGCTGAGAACTGCATTTGCGATGGGGAAG +
Preference number: 3 (lower is better)
Translates to: SPAPRKALPCIH*SGLRTAFAMGK
Trigger: CTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 72 bp TGGACACAGAGCCACGCCCACTCCTCTGCTGCAATCTaGACAGAGAGACCAGGATGGGTCATGAGGACTCTG +
Preference number: 3 (lower is better)
Translates to: WTQSHAHSSAAI*TERPGWVMRTL
Trigger: CAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGGCTCTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CCA 72 bp CTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTaGGCCTCTTTGGACCTCTGGTTCTTGCCATGGTTG +
Preference number: 3 (lower is better)
Translates to: LVCAGLSTRTWV*ASLDLWFLPWL
Trigger: CAACCATGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp GAGAGCCTCCTTGTCCACCACATCTTCGCAGGCACGTaGAGCCCACCAAGACCTCTGCTGTCAGTATTCTCT +
Preference number: 3 (lower is better)
Translates to: ESLLVHHIFAGT*SPPRPLLSVFS
Trigger: AGAGAATACTGACAGCAGAGGTCTTGGTGGGCTGCACGTGCCTGCGAAGATGTGGTGGACAAGGAGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp GGCCCTTCCTTGTATCCACTGCAGTGGGCTGAGAACTaGATTTGCGATGGGGAAGTTCACATCCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: GPSLYPLQWAEN*ICDGEVHILPL
Trigger: CAATGGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR TCA 72 bp CGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGGCTaGGAACTGCATTTGCGATGGGGAAGTTCACATCCT +
Preference number: 3 (lower is better)
Translates to: RERPFLVSTAVG*ELHLRWGSSHP
Trigger: AGGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR TCA 72 bp TTGAAGCCACACTTGCGTGGCTTCCTCCATCCAGCCTaGGCTCCCTTTCTTGATCTGGTAAGTTTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: LKPHLRGFLHPA*APFLDLVSFSE
Trigger: CTCAGAGAAACTTACCAGATCAAGAAAGGGAGCTCAGGCTGGATGGAGGAAGCCACGCAAGTGTGGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR GCA 72 bp AGTTTCTCTGAGAACACTCACCCGCAAGAAACTACTTaGCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGG +
Preference number: 3 (lower is better)
Translates to: SFSENTHPQETT*PRIPLSDFASR
Trigger: CCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GGTGTCGGGGGCACCCACCCCGTGATCGAGAGCCGCCTCCTTCCTAGCCTGGCAGGGCTGTCCTTCCGCTaGCACCCCTCCAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVGGTHPVIESRLLPSLAGLSFR*HPSKAQ
Trigger: CTGGGCCTTGGAGGGGTGGCAGCGGAAGGACAGCCC...TGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGTGGGTGGTCCCCGCGTaGTGGCCCGCTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLWVVPA*WPAGHS
Trigger: GGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCA...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCCCCCACGGCCGTCGCTaGTGCTCTCAGCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARPHGRR*CSQPPS
Trigger: TGACGGTGGCTGAGAGCAGCAGCGACGGCCGTGGGG...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCTGGCCGGTAGGCTGCTaGCCGGGCCTGGTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLSPHSWAAISTEQILRGWPVGC*PGLVSW
Trigger: CCAAGAGACCAGGCCCGGGCAGCAGCCTACCGGCCA...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCACGTGGCCGGTAGGCTaGTGCCCGGGCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARTWPVG*CPGLVS
Trigger: AGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGT...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCACAGCCCAGCCCCTCTaGTTCTGGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLSPHSWAAISTEQILRGTAQPL*FWVGAP
Trigger: GGGGGCTCCCACCCAGAAGCAGAGGGGCTGGGCTGT...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 72 bp CACGTGGCCGGTAGGCTGCTGCCCGGGCCTGGTCTCTaGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HVAGRLLPGPGL*VSSPAPRKALP
Trigger: AGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGGGCACCCACCCCGTaGTCGAGAGCCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAGAPTP*SRAASF
Trigger: GAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCC...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGGGGCACCCACCCCGTaGTCGAGAGCCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRGAPTP*SRAASF
Trigger: GAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCC...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGTGGGTGGTCCCCGCGTaGTGGCCCGCTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAWVVPA*WPAGHS
Trigger: GGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCA...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GGTGTCGGGGGCACCCACCCCGTGATCGAGAGCCGCCTCCTTCCTAGCCTGGCACCTGGGCTGACCTCCTaGTGTGGCCATAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GVGGTHPVIESRLLPSLAPGLTS*CGHRVD
Trigger: GTCTACCCTATGGCCACAGCAGGAGGTCAGCCCAGG...TGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGCGGCAACGCCACCCCTaGAGTGTCGCCGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAERQRHP*SVAGLP
Trigger: CGGGAGCCCGGCGACACTGCAGGGGTGGCGTTGCCG...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCACGCGTGCTGGCCCGCTaGGCATTCCAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASRVLAR*AFQAGT
Trigger: AGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCG...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGGCCTTTGCGGCTGGGTaGTCCCCGCGTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAEAFAAG*SPRAGP
Trigger: CGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGC...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCTTTGCGGCTGGGTaGTCCCCGCGTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ASDRAEWVPGSSSSIAQLAFAAG*SPRAGP
Trigger: CGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGC...CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGCCTTTGCGGCTGGGTaGTCCCCGCGTGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRAAFAAG*SPRAGP
Trigger: CGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGC...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GGTGTCGGGGGCACCCACCCCGTGATCGAGAGCCGCCTCCTTCCTAGCCTGGCATGCTCACGGAGGAGATaGAGTTCAGGGAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGGTHPVIESRLLPSLACSRRR*SSGSRP
Trigger: CGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCA...TGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGGCCCAGCTCGGCAGCTaGCCTACCGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWAQLGS*PTGRSR
Trigger: CCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGC...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGCCCAGCTCGGCAGCTaGCCTACCGGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQAQLGS*PTGRSR
Trigger: CCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGC...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCGGGTCCTTCAGAACCTaGGAGGGAGGCCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARGSFRT*EGGPWV
Trigger: TACCCAGGGGCCTCCCTCTCAGGTTCTGAAGGACCC...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR TCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGCCCTCAGAGCCCCCTaGGTCCACACAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMALRAP*VHTAGL
Trigger: CAGCCCAGCTGTGTGGACTCAGGGGGCTCTGAGGGC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCCAGGGCCAGGGCCCCTaGAGCATAGACACCCACCTC +
Preference number: 4 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSQGQGP*SIDTHL
Trigger: GAGGTGGGTGTCTATGCTGCAGGGGCCCTGGCCCTG...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGGGCCAGGGCCCCTaGAGCATAGACACCCACCTC +
Preference number: 4 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHQGQGP*SIDTHL
Trigger: GAGGTGGGTGTCTATGCTGCAGGGGCCCTGGCCCTG...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCACGGCCGTCGCTGCTaGTCTCAGCCACCGTCACGC +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQHGRRC*SQPPSR
Trigger: GCGTGACGGTGGCTGAGAGCAGCAGCGACGGCCGTG...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCACACGGCCGTCGCTGCTaGTCTCAGCCACCGTCACGC +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPHGRRC*SQPPSR
Trigger: GCGTGACGGTGGCTGAGAGCAGCAGCGACGGCCGTG...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGTGGCCGGTAGGCTGCTaGCCGGGCCTGGTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEWPVGC*PGLVSW
Trigger: CCAAGAGACCAGGCCCGGGCAGCAGCCTACCGGCCA...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAACGTGGCCGGTAGGCTaGTGCCCGGGCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTTWPVG*CPGLVS
Trigger: AGAGACCAGGCCCGGGCAGCAGCCTACCGGCCACGT...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGCGGCTTCCTGGGACTaGGGGACACCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMAASWD*GTPGWG
Trigger: TCCCCAGCCTGGTGTCCCGCAGTCCCAGGAAGCCGC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCGGAACGGAGAGGGGCTaGGGAAGCTCCCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSGTERG*GSSPTS
Trigger: GGACGTCGGGGAGCTTCCCCAGCCCCTCTCCGTTCC...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGGTGGTCCCCGCGTGCTaGCCCGCTGGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWVVPAC*PAGHSR
Trigger: CCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCAC...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GGTGTCGGGGGCACCCACCCCGTGATCGAGAGCCGCCTCCTTCCTAGCCTGGCAATGCTCACCTCCACCTaGCCCAGTGTGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GVGGTHPVIESRLLPSLAMLTST*PSVKSC
Trigger: GCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCAT...TGCCAGGCTAGGAAGGAGGCGGCTCTCGATCACGGGGTGGGTGCCCCCGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGAGGACAGCGTGCCACATaGACACGGGCCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGGQRAT*TRACAA
Trigger: CGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCC...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACCCGGGCCTGGTCTCTTaGTCTCTTCTCCGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDPGLVS*SLLRPR
Trigger: TCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGG...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCCGCCCTTCCACCCTaGCCTTCCCCGGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTAALPP*PSPASH
Trigger: ATGGGAAGCCGGGGAAGGCCAGGGTGGAAGGGCGGC...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGCCCTCTGCTTCTGGGTaGGAGCCCCCAGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWPSASG*EPPGCP
Trigger: GGGGCACCCTGGGGGCTCCCACCCAGAAGCAGAGGG...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCACCGAGCAGGGCTCCCTaGAAGCCCCCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPPSRAP*KPPLPA
Trigger: GGCAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGG...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCTGTGGGGAGGTAGCTaGGGGAGAGCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHLWGGS*GRAGSP
Trigger: GGGAGATCCTGCTCTCCCTCAGCTACCTCCCCACAG...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp TCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCCTGTGGGGAGGTAGCTaGGGGAGAGCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: SARGPQCSRLQLGYGEGILWGGS*GRAGSP
Trigger: GGGAGATCCTGCTCTCCCTCAGCTACCTCCCCACAG...GATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCGGGAGGAGCAGGGTTaGGTCCTCTGTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQREEQG*VLCPGP
Trigger: TGGGCCAGGACAGAGGACTCAACCCTGCTCCTCCCG...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp GCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCTGCCACCCCCAGGCTaGGACCTGCCTGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: APAGLWRGHQTELSGYRALPPPG*DLPEAS
Trigger: AGATGCCTCAGGCAGGTCTCAGCCTGGGGGTGGCAG...AGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGACAGGGCCAGGGCCCCTaGAGCATAGACACCCACCTC +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGQGQGP*SIDTHL
Trigger: GAGGTGGGTGTCTATGCTGCAGGGGCCCTGGCCCTG...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCCTTCTCCCTGGCCTCTaGGCAGCTCTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARLLPGL*AALAVL
Trigger: AAGTACGGCGAGAGCTGCGCAGAGGCCAGGGAGAAG...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCTGGGTGGTCCCCGCGTaGTGGCCCGCTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPWVVPA*WPAGHS
Trigger: GGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCA...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCAGGAGGTCCTTGCCCTaGATCACCGCCACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARRRSLP*ITATFS
Trigger: GCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCT...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTCCAGGAGGTCCTTaGCCTGCATCACCGCCACGT +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWAPGGP*PASPPR
Trigger: ACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGC...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCCACGGCCGTCGCTGCTaGTCTCAGCCACCGTCACGC +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTHGRRC*SQPPSR
Trigger: GCGTGACGGTGGCTGAGAGCAGCAGCGACGGCCGTG...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCCTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGCGGCTTCCTGGGACTaGGGGACACCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWAASWD*GTPGWG
Trigger: TCCCCAGCCTGGTGTCCCGCAGTCCCAGGAAGCCGC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCACAGCCTGAGGGTCCATaGTGTCACCTGTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASQPEGP*CHLWVA
Trigger: GGCCACCCACAGGTGACAGCATGGACCCTCAGGCTG...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGGAAAGCCACCATCCTaGCTCCAGTCCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMGKPPS*LQSPGP
Trigger: GGGCCCAGGGGACTGGAGGCAGGATGGTGGCTTTCC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCGGAAAGCCACCATCCTaGCTCCAGTCCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLGKPPS*LQSPGP
Trigger: GGGCCCAGGGGACTGGAGGCAGGATGGTGGCTTTCC...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGGGGAGTCAGTGGCCTaGACCGCACAGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEGESVA*TAQPLG
Trigger: ACCCAGTGGCTGTGCGGTGCAGGCCACTGACTCCCC...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACACCATGGTGCAGTCCCTaGGAAGGCCCTTCGCCCACG +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTPWCSP*EGPSPT
Trigger: CGTGGGCGAAGGGCCTTCCCAGGGACTGCACCATGG...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGGTGGTCCCCGCGTGCTaGCCCGCTGGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQVVPAC*PAGHSR
Trigger: CCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCAC...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCGACTGCCTTTGCGGCTaGGTGGTCCCCGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTDCLCG*VVPACW
Trigger: CCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTC...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGACTGCCTTTGCGGCTaGGTGGTCCCCGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASDRAEWVPGSSSSIAQLDCLCG*VVPACW
Trigger: CCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTC...CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAAGGGAGTCGGCCGACTaGGACTTCCGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTRESAD*DFRRVP
Trigger: TGGGACCCTCCGGAAGTCCCAGTCGGCCGACTCCCT...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGGACAGCGTGCCACATaGACACGGGCCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWGQRAT*TRACAA
Trigger: CGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCGCTGCTGCCCGGGCCTaGTCTCTTGGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSAAARA*SLGLFS
Trigger: GGAGAAGAGACCAAGAGACCAGGCCCGGGCAGCAGC...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCAGCCAGTGTTCCACGTaGCCGGTAGGCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTSQCST*PVGCCP
Trigger: CGGGCAGCAGCCTACCGGCCACGTGGAACACTGGCT...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGCCAGTGTTCCACGTaGCCGGTAGGCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMESQCST*PVGCCP
Trigger: CGGGCAGCAGCCTACCGGCCACGTGGAACACTGGCT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGCAGGCCTCAGCCACCTaGGCTGTCCTTCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVEQASAT*AVLPLP
Trigger: TGGCAGCGGAAGGACAGCCCAGGTGGCTGAGGCCTG...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCCCTCTGCTTCTGGGTaGGAGCCCCCAGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPPSASG*EPPGCP
Trigger: GGGGCACCCTGGGGGCTCCCACCCAGAAGCAGAGGG...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCCAAGAAGCGGCTTCCTaGGACTGCGGGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSQEAAS*DCGTPG
Trigger: GCCTGGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTG...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCCTGCCTCCAGTCCCCTaGGCCCTTGTTCTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SARGPQCSRLQLGYGEGILPPVP*ALVLAP
Trigger: AGGGGCTAGAACAAGGGCCCAGGGGACTGGAGGCAG...GATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGCCTGGCCTTGGGGCTaGGCCATGGCTGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMAWPWG*AMAVSG
Trigger: ACCTGACACAGCCATGGCCCAGCCCCAAGGCCAGGC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCAGGTGTCCTCAATGCTaGGACTGCCTTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLSPHSWAAISTEQILRGRCPQC*DCLCGW
Trigger: CCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCT...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGCCACCACCCCCGTGCTaGCGTTGCGCTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAPPPPC*RCAHPH
Trigger: ATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGG...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGCCACCACCCCCGTGCTaGCGTTGCGCTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLPPPPC*RCAHPH
Trigger: ATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGG...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCCACCACCCCCGTGCTaGCGTTGCGCTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLPPPPC*RCAHPH
Trigger: ATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGG...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCGCAGCAGGTACACCTTaGCGAAGGGGTCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLAAGTP*RRGPLW
Trigger: CCACAGCGGACCCCTTCGTCAAGGTGTACCTGCTGC...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCGCAGCAGGTACACCTTaGCGAAGGGGTCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGAAGTP*RRGPLW
Trigger: CCACAGCGGACCCCTTCGTCAAGGTGTACCTGCTGC...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGGCATCAGACAGAGCTaGGTGGGTACCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRGIRQS*VGTGLQ
Trigger: CTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCC...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCCTGCCACCCCCAGGCTaGGACCTGCCTGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTLPPPG*DLPEAS
Trigger: AGATGCCTCAGGCAGGTCTCAGCCTGGGGGTGGCAG...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCACCCAGCACTCAGCCATaGAGGCAAGAAGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASPSTQP*RQEAAS
Trigger: GGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGG...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGCCCAGCACTCAGCCATaGAGGCAAGAAGCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWPSTQP*RQEAAS
Trigger: GGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGG...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGCCACAGGCTCACAGCTaGGATTCCCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAPQAHS*DSQQGQ
Trigger: CTGGCCCTGCTGGGAATCGCAGCTGTGAGCCTGTGG...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCGAAATGCCCACGATCTaGTCGTCCGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSEMPTI*SSGSRL
Trigger: CAGCCTGCTGCCGGACGAGCAGATCGTGGGCATTTC...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCATTTCGCCGGACAGCGTaGCACATGGACACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPFRRTA*HMDTGL
Trigger: CAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAA...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGATTTCGCCGGACAGCGTaGCACATGGACACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGFRRTA*HMDTGL
Trigger: CAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAA...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCGGTCTGGGCCTGGTTTaGGCAGGACTGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSGLGLV*AGLSTR
Trigger: CCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACC...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACGGGCTGTCCTTCCGCTaGCACCCCTCCAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYGLSFR*HPSKAQ
Trigger: CTGGGCCTTGGAGGGGTGGCAGCGGAAGGACAGCCC...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCAGCCTGAGGGTCCATaGTGTCACCTGTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSQPEGP*CHLWVA
Trigger: GGCCACCCACAGGTGACAGCATGGACCCTCAGGCTG...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACCCTGGGCTGACCTCCTaGTGTGGCCATAGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDPGLTS*CGHRVD
Trigger: GTCTACCCTATGGCCACAGCAGGAGGTCAGCCCAGG...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCGGGGAGTCAGTGGCCTaGACCGCACAGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTGESVA*TAQPLG
Trigger: ACCCAGTGGCTGTGCGGTGCAGGCCACTGACTCCCC...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCCGGCCTCCTACTCACTaGGTAGCCTACCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSRPPTH*VAYPAS
Trigger: AGAGGCAGGGTAGGCTACCCAGTGAGTAGGAGGCCG...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGGAACGGAGAGGGGCTaGGGAAGCTCCCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWGTERG*GSSPTS
Trigger: GGACGTCGGGGAGCTTCCCCAGCCCCTCTCCGTTCC...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGCACTCTCTTCTCCCTaGCCTCTGCGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQALSSP*PLRSSR
Trigger: GCGAGAGCTGCGCAGAGGCCAGGGAGAAGAGAGTGC...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTCGCGTGCTGGCCCGCTaGGCATTCCAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSIRVLAR*AFQAGT
Trigger: AGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCG...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGTGGTCCCCGCGTGCTaGCCCGCTGGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVVVPAC*PAGHSR
Trigger: CCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCAC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGACTGCCTTTGCGGCTaGGTGGTCCCCGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWDCLCG*VVPACW
Trigger: CCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTC...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGTGCTCACGGAGGAGATaGAGTTCAGGGAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLCSRRR*SSGSRP
Trigger: CGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCA...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGCAGGACTCGAAGCTaGCCTCCTCCCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMESRTRS*PPPAPG
Trigger: TCCTGGAGCGGGAGGAGGCCAGCTTCGAGTCCTGCT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGACAGCGTGCCACATaGACACGGGCCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHGQRAT*TRACAA
Trigger: CGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCC...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGCCAACTGGCCCGCCCTaGTTGCTAGTTTCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMPTGPP*LLVSPD
Trigger: GTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGG...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCCAACTGGCCCGCCCTaGTTGCTAGTTTCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQPTGPP*LLVSPD
Trigger: GTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGG...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGCTCCATTGCCCAACTaGCCCGCCCTGGTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASAPLPN*PALVAS
Trigger: ACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGC...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGCAGGCCTCAGCCACCTaGGCTGTCCTTCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAEQASAT*AVLPLP
Trigger: TGGCAGCGGAAGGACAGCCCAGGTGGCTGAGGCCTG...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACAGCCCCTCTGCTTCTaGGTGGGAGCCCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVQPLCF*VGAPRV
Trigger: CACCCTGGGGGCTCCCACCCAGAAGCAGAGGGGCTG...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCCATGCTGTCACCTGTaGGTGGCCCCACCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSPCCHL*VAPPSR
Trigger: TCTGCTCGGTGGGGCCACCCACAGGTGACAGCATGG...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTCCGAGCAGGGCTCCCTaGAAGCCCCCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PVFTAPAGLWRGHQTELSPSRAP*KPPLPA
Trigger: GGCAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGG...ACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGCCACCTGGCCCAGTGTaGAGTCCTGCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEPPGPV*SPAQRC
Trigger: ACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGG...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCCACCTGGCCCAGTGTaGAGTCCTGCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSPPGPV*SPAQRC
Trigger: ACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGG...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCAATAGAGCCAGCCACTaGAGGGCTGCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGNRASH*RAAAGG
Trigger: ACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATT...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGAATAGAGCCAGCCACTaGAGGGCTGCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWNRASH*RAAAGG
Trigger: ACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATT...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGGCATCAGACAGAGCTaGGTGGGTACCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWGIRQS*VGTGLQ
Trigger: CTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGCGGGAGGAGCAGGGTTaGGTCCTCTGTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWREEQG*VLCPGP
Trigger: TGGGCCAGGACAGAGGACTCAACCCTGCTCCTCCCG...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCGCCCTCAGAGCCCCCTaGGTCCACACAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSALRAP*VHTAGL
Trigger: CAGCCCAGCTGTGTGGACTCAGGGGGCTCTGAGGGC...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCACACCAGGCTGGGGATaGCAAGCTCTGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ERASDRAEWVPGSSSSIATPGWG*QALPAL
Trigger: GAGAGCAGGCAGAGCTTGTCATCCCCAGCCTGGTGT...GGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGAGAAGAGACGAAGGTaGTTCAGGGCCGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAEKRRR*FRAEQG
Trigger: GCCCTGCTCGGCCCTGAATCACCTTCGTCTCTTCTC...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGAGAAGAGACGAAGGTaGTTCAGGGCCGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPEKRRR*FRAEQG
Trigger: GCCCTGCTCGGCCCTGAATCACCTTCGTCTCTTCTC...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATGTCTTGGCCTCAACTTaGCTCCCAGGTGTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHVLAST*LPGVQA
Trigger: CGCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGAC...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCCAGTGTCGTACTCCATaGTCACCTCCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSQCRTP*SPPPGP
Trigger: TGGGCCAGGTGGAGGTGAGCATGGAGTACGACACTG...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAAGGAGGTCCTTGCCCTaGATCACCGCCACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTRRSLP*ITATFS
Trigger: GCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCT...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGAGGAGGTCCTTGCCCTaGATCACCGCCACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMRRSLP*ITATFS
Trigger: GCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCT...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAGCCACTGAAGGGCTaGAGCGGGAGGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: ERASDRAEWVPGSSSSIAQPLKG*SGRSST
Trigger: TGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTG...GGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCCCCCACGGCCGTCGCTaGTGCTCTCAGCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSPHGRR*CSQPPS
Trigger: TGACGGTGGCTGAGAGCAGCAGCGACGGCCGTGGGG...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGCCCCACGGCCGTCGCTaGTGCTCTCAGCCACCGTCA +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVPHGRR*CSQPPS
Trigger: TGACGGTGGCTGAGAGCAGCAGCGACGGCCGTGGGG...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGACATGGACACGGGCCTaGGCAGCGTGGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMETWTRA*AAWPTS
Trigger: AGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGACATGGACACGGGCCTaGGCAGCGTGGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRTWTRA*AAWPTS
Trigger: AGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGT...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTTTCGCCGGACAGCGTaGCACATGGACACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAEFRRTA*HMDTGL
Trigger: CAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAA...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGCTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACCCACGCCCACTCCTCTaGTGCAATCTGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDPRPLL*CNLDRE
Trigger: CTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGG...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCGCTCAGTTCTTTTCCTaGCCCTCCAAGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARAQFFS*PSKHSS
Trigger: GGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGC...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGCGGGGTCTCCCAGGCTaGAAAGCCTTGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRRGLPG*KALSSH
Trigger: ATGGCTGGACAAGGCTTTGCAGCCTGGGAGACCCCG...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGCTCGAGCGCTGTCTCTaGTCCTGGGGTCCGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVLERCL*SWGPSR
Trigger: CCGGCTCGGACCCCAGGAGCAGAGACAGCGCTCGAG...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS-3UTR CCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGCCGTACCAGCCCCTCTaGGCCAGGAGATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWPYQPL*ARRSGA
Trigger: GGCTCCAGATCTCCTGGCCCAGAGGGGCTGGTACGG...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACAGGGAGTCGGCCGACTaGGACTTCCGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHRESAD*DFRRVP
Trigger: TGGGACCCTCCGGAAGTCCCAGTCGGCCGACTCCCT...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGAGGGAGTCGGCCGACTaGGACTTCCGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQRESAD*DFRRVP
Trigger: TGGGACCCTCCGGAAGTCCCAGTCGGCCGACTCCCT...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGTGCTCACGGAGGAGATaGAGTTCAGGGAGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLCSRRR*SSGSRP
Trigger: CGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCA...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGATGCTCACCTCCACCTaGCCCAGTGTGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWMLTST*PSVKSC
Trigger: GCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCAT...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCGCCACGTTCAGCGTGTaGGAGGCAGTGTCGTACTCC +
Preference number: 4 (lower is better)
Translates to: ERASDRAEWVPGSSSSIAATFSV*EAVSYS
Trigger: GGAGTACGACACTGCCTCCCACACGCTGAACGTGGC...GGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACCGAAGGGGTCCGCTGTaGTCTTGTCGTTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDRRGPL*SCRWSR
Trigger: TCTGGACCAACGACAAGACCACAGCGGACCCCTTCG...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCGGTCCTGGAGCACAATaGCTGGCACCGAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARGPGAQ*LAPRRS
Trigger: TGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACC...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCGGAGAGACAGGTCCTaGAGCACAATGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSRRDRS*STMAGT
Trigger: GGTGCCAGCCATTGTGCTCCAGGACCTGTCTCTCCG...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGGCCCAATGATGACATaGCCCACGTTGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQGPMMT*PTLSPR
Trigger: CCGTGGGGACAACGTGGGCCATGTCATCATTGGGCC...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGCCCAATGATGACATaGCCCACGTTGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTGPMMT*PTLSPR
Trigger: CCGTGGGGACAACGTGGGCCATGTCATCATTGGGCC...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGGCCCAATGATGACATaGCCCACGTTGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMGPMMT*PTLSPR
Trigger: CCGTGGGGACAACGTGGGCCATGTCATCATTGGGCC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGCTCCATTGCCCAACTaGCCCGCCCTGGTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAAPLPN*PALVAS
Trigger: ACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGC...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGTCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVESDRAE*VPGSSS
Trigger: GCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGA...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTTCAGACAGAGCTGAGTaGGTACCGGGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: APAGLWRGHQTELSGYRASDRAE*VPGSSS
Trigger: GCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGA...AGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHVHGSS*AMERAS
Trigger: TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGTCGTGTTACCCCTGCTaGTGCCTAGCACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWSCYPC*CLAQCL
Trigger: CAGGCACTGTGCTAGGCACCAGCAGGGGTAACACGA...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCACTGAGTCCACACAGCTaGGCTGCCATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASLSPHS*AAISTE
Trigger: CTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAG...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGTGCCATTGCTCAGGCTaGGCCCGCTGCCTGCGACAT +
Preference number: 4 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELCHCSG*ARCLRH
Trigger: ATGTCGCAGGCAGCGGGCCCAGCCTGAGCAATGGCA...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTCCGGGCCTGGTCTCTTaGTCTCTTCTCCGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PVFTAPAGLWRGHQTELSPGLVS*SLLRPR
Trigger: TCGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGG...ACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGGCTGCTGCCCGGGCCTaGTCTCTTGGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAEAAARA*SLGLFS
Trigger: GGAGAAGAGACCAAGAGACCAGGCCCGGGCAGCAGC...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCCTGAGCACAAGGACCTaGGTCTGGGCCTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSLSTRT*VWASLD
Trigger: GTCCAAAGAGGCCCAGACCCAGGTCCTTGTGCTCAG...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGAATGCTTGCAGGGTCTaGGCCTGGTTTGCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWNACRV*AWFAQD
Trigger: GTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATT...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCTGCCTCCAGTCCCCTaGGCCCTTGTTCTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRALPPVP*ALVLAP
Trigger: AGGGGCTAGAACAAGGGCCCAGGGGACTGGAGGCAG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 72 bp CCTGCCCCCACAGCGATCAGGCCAAGGCGATGGATCTaGAAGCCACACTTGCGTGGCTTCCTCCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PAPTAIRPRRWI*KPHLRGFLHPA
Trigger: GGCTGGATGGAGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGTGTCCTCAATGCTaGGACTGCCTTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMERCPQC*DCLCGW
Trigger: CCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCGAGGCCCCAGTTCACTaGTGCTCTCAAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSEAPVH*CSQRCP
Trigger: AGGACACCTTTGAGAGCATCAGTGAACTGGGGCCTC...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGAGGCCCCAGTTCACTaGTGCTCTCAAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWEAPVH*CSQRCP
Trigger: AGGACACCTTTGAGAGCATCAGTGAACTGGGGCCTC...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGTCCCATGCCACTGGCTaGCGGCCCAATGATGACATG +
Preference number: 4 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRSHATG*RPNDDM
Trigger: CATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGA...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGGCTGCCATCAGCACTaGGCAGATCCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTGCHQH*ADPPGQ
Trigger: CTGCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCC...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGGCTGCCATCAGCACTaGGCAGATCCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVGCHQH*ADPPGQ
Trigger: CTGCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGTGGTTTGCGCAGGACTaGGCACAAGGACCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRWFAQD*AQGPGS
Trigger: AGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCA...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGTGGTTTGCGCAGGACTaGGCACAAGGACCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEWFAQD*AQGPGS
Trigger: AGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCA...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGCCACAGGCTCACAGCTaGGATTCCCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWPQAHS*DSQQGQ
Trigger: CTGGCCCTGCTGGGAATCGCAGCTGTGAGCCTGTGG...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGGAAATGCCCACGATCTaGTCGTCCGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELEMPTI*SSGSRL
Trigger: CAGCCTGCTGCCGGACGAGCAGATCGTGGGCATTTC...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTCTGGATCCGAGAAATaGCCACGATCTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSSGSEK*PRSARP
Trigger: CGGACGAGCAGATCGTGGGCATTTCTCGGATCCAGA...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTACATGGACACGGGCCTaGGCAGCGTGGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRATWTRA*AAWPTS
Trigger: AGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGT...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTCCAGCAGCTCCATTaGCCAACTGGCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDLQQLH*PTGPPW
Trigger: CCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGACCACGCCCACTCCTCTaGTGCAATCTGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGPRPLL*CNLDRE
Trigger: CTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGG...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCAAGGGCATCAACAAATaGTTGCAGGGTCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARKGINK*LQGLGL
Trigger: CAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTT...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGATCTTCGCAGGCACGTaGAGCCCACCAAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRIFAGT*SPPRPL
Trigger: CAGAGGTCTTGGTGGGCTGCACGTGCCTGCGAAGAT...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGATCTTCGCAGGCACGTaGAGCCCACCAAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEIFAGT*SPPRPL
Trigger: CAGAGGTCTTGGTGGGCTGCACGTGCCTGCGAAGAT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGCGGGGTCTCCCAGGCTaGAAAGCCTTGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWRGLPG*KALSSH
Trigger: ATGGCTGGACAAGGCTTTGCAGCCTGGGAGACCCCG...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGTCTGGAGCCCTGCTGTaGTTCCTTCGGCCTCCTACT +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLSGALL*FLRPPT
Trigger: AGTAGGAGGCCGAAGGAACCACAGCAGGGCTCCAGA...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACACCTGTAGTCGTAATTaGGGAACGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDTCSRN*GTERGW
Trigger: CCAGCCCCTCTCCGTTCCCCAATTACGACTACAGGT...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCACTCTCTTCTCCCTaGCCTCTGCGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSIALSSP*PLRSSR
Trigger: GCGAGAGCTGCGCAGAGGCCAGGGAGAAGAGAGTGC...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGCACTCTCTTCTCCCTaGCCTCTGCGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWALSSP*PLRSSR
Trigger: GCGAGAGCTGCGCAGAGGCCAGGGAGAAGAGAGTGC...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGCCACGTTCAGCGTGTaGGAGGCAGTGTCGTACTCC +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWATFSV*EAVSYS
Trigger: GGAGTACGACACTGCCTCCCACACGCTGAACGTGGC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTAGCAGGACTCGAAGCTaGCCTCCTCCCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSISRTRS*PPPAPG
Trigger: TCCTGGAGCGGGAGGAGGCCAGCTTCGAGTCCTGCT...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGTCTCCTCCAGGGCTGTaGGATCCAGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELSPPGL*DPGGWR
Trigger: TCTCCATCCCCCTGGATCCCACAGCCCTGGAGGAGA...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGTCTCCTCCAGGGCTGTaGGATCCAGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWSPPGL*DPGGWR
Trigger: TCTCCATCCCCCTGGATCCCACAGCCCTGGAGGAGA...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCGGAGAGACAGGTCCTaGAGCACAATGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRARRDRS*STMAGT
Trigger: GGTGCCAGCCATTGTGCTCCAGGACCTGTCTCTCCG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGAGCTCCAGCTGGGCTATaGAGAGGGCATCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGAPAGL*RGHQTE
Trigger: CTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SPSQHSAMKARSGFLGLRVHGSS*AMERAS
Trigger: TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC...CCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCCTGAGTCCACACAGCTaGGCTGCCATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGLSPHS*AAISTE
Trigger: CTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAG...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGCTGAGCACAAGGACCTaGGTCTGGGCCTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVELSTRT*VWASLD
Trigger: GTCCAAAGAGGCCCAGACCCAGGTCCTTGTGCTCAG...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCACATTCAGTCTTCTCCTaGCGTCCCTCAAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPHSVFS*RPSSRP
Trigger: AGGGCGGCTTGAGGGACGCCAGGAGAAGACTGAATG...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACGCCTCCTTCCTAGCCTaGCATTCAGTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGDPSVHGSSWAMERASDASFLA*HSVFSW
Trigger: CCAGGAGAAGACTGAATGCCAGGCTAGGAAGGAGGC...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTCAAGAAGCGGCTTCCTaGGACTGCGGGACACCAGGC +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSIQEAAS*DCGTPG
Trigger: GCCTGGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTG...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGCCATGCTGTCACCTGTaGGTGGCCCCACCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQPCCHL*VAPPSR
Trigger: TCTGCTCGGTGGGGCCACCCACAGGTGACAGCATGG...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGCCTGGCCTTGGGGCTaGGCCATGGCTGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVAWPWG*AMAVSG
Trigger: ACCTGACACAGCCATGGCCCAGCCCCAAGGCCAGGC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGGCACCGCACAGCCACTaGGTTAGAGAAAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWAPHSH*VRESRG
Trigger: ACCCCGACTTTCTCTAACCCAGTGGCTGTGCGGTGC...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCCACCTGGCCCAGTGTaGAGTCCTGCCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPPPGPV*SPAQRC
Trigger: ACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGG...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTCTGTGGGGAGGTAGCTaGGGGAGAGCAGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPLWGGS*GRAGSP
Trigger: GGGAGATCCTGCTCTCCCTCAGCTACCTCCCCACAG...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCTGGGTAGCCTACCCTaGCTCTCCATCACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYLGSLP*LSITPG
Trigger: ACCTGGGGTGATGGAGAGGCAGGGTAGGCTACCCAG...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp CCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGAGATCTGGAGCCCTaGTGTGGTTCCTTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVFTAPAGLWRGHQTELSGDLEP*CGSFGL
Trigger: GAGGCCGAAGGAACCACAGCAGGGCTCCAGATCTCC...ACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCAGCCATGATGTCTGCTaGAGTGACTGTGACTTCACC +
Preference number: 4 (lower is better)
Translates to: PLSPHSWAAISTEQILRGSHDVC*SDCDFT
Trigger: GGTGAAGTCACAGTCACTGCAGCAGACATCATGGCT...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGCCCAGTGTGAAGTCCTaGCCAAAGGTGTTGCTCACG +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLPSVKS*PKVLLT
Trigger: CGTGAGCAACACCTTTGGGCAGGACTTCACACTGGG...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCCCAGTGTGAAGTCCTaGCCAAAGGTGTTGCTCACG +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQPSVKS*PKVLLT
Trigger: CGTGAGCAACACCTTTGGGCAGGACTTCACACTGGG...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACAGTGTCGTACTCCATaGTCACCTCCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RASDRAEWVPGSSSSIAQQCRTP*SPPPGP
Trigger: TGGGCCAGGTGGAGGTGAGCATGGAGTACGACACTG...TTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCGCTCCAGGAGGTCCTTaGCCTGCATCACCGCCACGT +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSAPGGP*PASPPR
Trigger: ACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGC...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTAGAAATGCCCACGATCTaGTCGTCCGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVEMPTI*SSGSRL
Trigger: CAGCCTGCTGCCGGACGAGCAGATCGTGGGCATTTC...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTCAGCCACTGAAGGGCTaGAGCGGGAGGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: PVFTAPAGLWRGHQTELSQPLKG*SGRSST
Trigger: TGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTG...ACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGATCTTCCTCCCATCCTaGAGCAGGTACACCTTGACG +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWIFLPS*SRYTLT
Trigger: CGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGAT...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGAATGTGTGGTTCCCATaGCACTGGCTGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLNVWFP*HWLTAQ
Trigger: TTGGGCCGTCAGCCAGTGGCATGGGAACCACACATT...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACGCCCACTCCTCTGCTaGAATCTGGACAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: RASDRAEWVPGSSSSIAQRPLLC*NLDRET
Trigger: GGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCG...TTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCTTCGTGTTACCCCTaGTGGTGCCTAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSSSCYP*WCLAQC
Trigger: GCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGA...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGATCTTCGTGTTACCCCTaGTGGTGCCTAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGSSCYP*WCLAQC
Trigger: GCACTGTGCTAGGCACCAGCAGGGGTAACACGAAGA...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGCTCAGTTCTTTTCCTaGCCCTCCAAGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEAQFFS*PSKHSS
Trigger: GGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGC...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGGGGGATGACAAGCTCTaGCTGCTCTCCTCCTACTGG +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWGDDKL*LLSSYW
Trigger: CCAGTAGGAGGAGAGCAGGCAGAGCTTGTCATCCCC...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAAGCCATGATGTCTGCTaGAGTGACTGTGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTSHDVC*SDCDRA
Trigger: AGCCCGGTCACAGTCACTGCAGCAGACATCATGGCT...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS-3UTR CCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCACAGCTGTGACCCCTaGGTCCTTCAGAACCTGAGA +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSHSCDP*VLQNLR
Trigger: TCTCAGGTTCTGAAGGACCCAGGGGTCACAGCTGTG...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCACCTGTAGTCGTAATTaGGGAACGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSTCSRN*GTERGW
Trigger: CCAGCCCCTCTCCGTTCCCCAATTACGACTACAGGT...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACTCTCCTCCAGGGCTGTaGGATCCAGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYSPPGL*DPGGWR
Trigger: TCTCCATCCCCCTGGATCCCACAGCCCTGGAGGAGA...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCGAAGGGGTCCGCTGTaGTCTTGTCGTTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRARRGPL*SCRWSR
Trigger: TCTGGACCAACGACAAGACCACAGCGGACCCCTTCG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCCTGGAGCACAATGGCTaGCACCGAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTLEHNG*HREDHG
Trigger: GCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAG...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACGGGCCTGCGCAGCGTaGCCAACATCTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVRACAA*PTSGSN
Trigger: ATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCG...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCATCCTCTGCTGCAATCTaGACAGAGAGACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASSSAAI*TERPGW
Trigger: CCATCCTGGTCTCTCTGTCCAGATTGCAGCAGAGGA...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTTGCCATTGCTCAGGCTaGGCCCGCTGCCTGCGACAT +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPCHCSG*ARCLRH
Trigger: ATGTCGCAGGCAGCGGGCCCAGCCTGAGCAATGGCA...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATGCCTCTTTGGACCTCTaGTTCTTGCCATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHASLDL*FLPWLR
Trigger: CCTCAACCATGGCAAGAACCAGAGGTCCAAAGAGGC...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGGGTCTGGGCCTCTTTaGACCTCTGGTTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRGSGPL*TSGSCH
Trigger: ATGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCC...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAAACAAGGACCTGGGTCTaGGCCTCTTTGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RASDRAEWVPGSSSSIAQTRTWV*ASLDLW
Trigger: CCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGT...TTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGCCGCCCTTCCACCCTaGCCTTCCCCGGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPAALPP*PSPASH
Trigger: ATGGGAAGCCGGGGAAGGCCAGGGTGGAAGGGCGGC...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGCCTCCTTCCTAGCCTaGCATTCAGTCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLASFLA*HSVFSW
Trigger: CCAGGAGAAGACTGAATGCCAGGCTAGGAAGGAGGC...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTCAGCCCCTCTGCTTCTaGGTGGGAGCCCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPQPLCF*VGAPRV
Trigger: CACCCTGGGGGCTCCCACCCAGAAGCAGAGGGGCTG...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCTTGGGGCTGGGCCATaGCTGTGTCAGGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRALGAGP*LCQVGK
Trigger: TTTCCCTACCTGACACAGCCATGGCCCAGCCCCAAG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 72 bp TTCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTaGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: FSQWACKGINKC*QGLGLVCAGLS
Trigger: GCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGATTGGAGAGACCATTATaGGCCCAAGTGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGLERPL*AQVPFS
Trigger: GCTGAAGGGCACTTGGGCTCATAATGGTCTCTCCAA...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR TCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGAGGTGTCCTCAATGCTaGGACTGCCTTTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWRCPQC*DCLCGW
Trigger: CCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCT...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTCCCATGCCACTGGCTaGCGGCCCAATGATGACATG +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQSHATG*RPNDDM
Trigger: CATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGA...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTCCACTGCAGTGGGCTaGGAACTGCATTTGCGATGG +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAESTAVG*ELHLRW
Trigger: CCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGA...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGTTCTTGCCATGGTTaGGGTCCGGGGAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTGSCHG*GPGSRF
Trigger: AAATCTACTCCCCGGACCTCAACCATGGCAAGAACC...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACATTCCTCCATCCAGCCTaGGCTCCCTTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTFLHPA*APFLDL
Trigger: CAGATCAAGAAAGGGAGCTCAGGCTGGATGGAGGAA...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGTTCCTCCATCCAGCCTaGGCTCCCTTTCTTGATCTG +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAFLHPA*APFLDL
Trigger: CAGATCAAGAAAGGGAGCTCAGGCTGGATGGAGGAA...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTACACCAGGCTGGGGATaGCAAGCTCTGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPTPGWG*QALPAL
Trigger: GAGAGCAGGCAGAGCTTGTCATCCCCAGCCTGGTGT...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTGAGTCCACACAGCTGGGCTGCCATCAGCACTGAGCAGATCCTCCGGGGCGCTCAGATGGTATTCTaGCACATCCACAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: PLSPHSWAAISTEQILRGAQMVF*HIHSHD
Trigger: ATCATGGCTGTGGATGTGGCAGAATACCATCTGAGC...GCCCCGGAGGATCTGCTCAGTGCTGATGGCAGCCCAGCTGTGTGGACTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCCTTCTCCCTGGCCTCTaGGCAGCTCTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSLLPGL*AALAVL
Trigger: AAGTACGGCGAGAGCTGCGCAGAGGCCAGGGAGAAG...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTCGTACTCCATaGTCACCTCCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPQCRTP*SPPPGP
Trigger: TGGGCCAGGTGGAGGTGAGCATGGAGTACGACACTG...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGAATGTGTGGTTCCCATaGCACTGGCTGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAENVWFP*HWLTAQ
Trigger: TTGGGCCGTCAGCCAGTGGCATGGGAACCACACATT...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTATGGTGCCTAGCACAGTaGCTGGCCCCCAAGATTCAC +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVWCLAQ*LAPKIH
Trigger: GTGAATCTTGGGGGCCAGGCACTGTGCTAGGCACCA...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGGGAAGTTCACATCCTaGCATTGCTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWGKFTS*HCSGWA
Trigger: GGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCC...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGGGAAGTTCACATCCTaGCATTGCTCAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWGKFTS*HCSGWA
Trigger: GGCCCAGCCTGAGCAATGGCAGGATGTGAACTTCCC...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGCCGCAAGAAACTACTTaGCCCAGAATCCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEPQETT*PRIPLS
Trigger: TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGG...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCACCGCAAGAAACTACTTaGCCCAGAATCCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPPQETT*PRIPLS
Trigger: TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGG...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAACAGCCCAGCCCCTCTaGTTCTGGGTGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSTAQPL*FWVGAP
Trigger: GGGGGCTCCCACCCAGAAGCAGAGGGGCTGGGCTGT...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGATGACAAGCTCTGCCTaGTCTCCTCCTACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELMTSSA*SPPTGA
Trigger: AGCCCCAGTAGGAGGAGAGCAGGCAGAGCTTGTCAT...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGGACAGGATCAGGGTTaGAGAGACCATTATGAGCCC +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPGQDQG*RDHYEP
Trigger: GGGCTCATAATGGTCTCTCCAACCCTGATCCTGTCC...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGCTGGGCCAGGAGATCTaGAGCCCTGCTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVLGQEI*SPAVVP
Trigger: AGGAACCACAGCAGGGCTCCAGATCTCCTGGCCCAG...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAAGGAAGTGTTCAGTaGAGCACCCCACACAGCTGT +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGEGSVQ*STPHSC
Trigger: ACAGCTGTGTGGGGTGCTCCACTGAACACTTCCTTC...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGACCTGTAGTCGTAATTaGGGAACGGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSVHGSSWAMERASDRAETCSRN*GTERGW
Trigger: CCAGCCCCTCTCCGTTCCCCAATTACGACTACAGGT...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCGCGTGCTGGCCCGCTaGGCATTCCAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRRVLAR*AFQAGT
Trigger: AGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCG...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACCGAAGGGGTCCGCTGTaGTCTTGTCGTTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHRRGPL*SCRWSR
Trigger: TCTGGACCAACGACAAGACCACAGCGGACCCCTTCG...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGTCCTGGAGCACAATaGCTGGCACCGAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ASDRAEWVPGSSSSIAQLGPGAQ*LAPRRS
Trigger: TGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACC...CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCGGTCCTGGAGCACAATaGCTGGCACCGAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTGPGAQ*LAPRRS
Trigger: TGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACC...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCCGGAGAGACAGGTCCTaGAGCACAATGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSRRDRS*STMAGT
Trigger: GGTGCCAGCCATTGTGCTCCAGGACCTGTCTCTCCG...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGTCTGGTTCCAATGTGTaGTTCCCATGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQSGSNV*FPCHWL
Trigger: CAGCCAGTGGCATGGGAACCACACATTGGAACCAGA...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCAGCGTGGCCAACATCTaGTTCCAATGTGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGSVANI*FQCVVP
Trigger: GGGAACCACACATTGGAACCAGATGTTGGCCACGCT...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTAGCTCCAGCTGGGCTATaGAGAGGGCATCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVAPAGL*RGHQTE
Trigger: CTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGGTTCACGGCTCCAGCTaGGCTATGGAGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQVHGSS*AMERAS
Trigger: TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTATCGTGTTACCCCTGCTaGTGCCTAGCACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVSCYPC*CLAQCL
Trigger: CAGGCACTGTGCTAGGCACCAGCAGGGGTAACACGA...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACACCGCCTCTTTGGACCTCTaGTTCTTGCCATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SQHSAMKARSGFLGLRDTASLDL*FLPWLR
Trigger: CCTCAACCATGGCAAGAACCAGAGGTCCAAAGAGGC...GGTGTCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTACAAGGACCTGGGTCTaGGCCTCTTTGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSITRTWV*ASLDLW
Trigger: CCAGAGGTCCAAAGAGGCCCAGACCCAGGTCCTTGT...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGAATGCTTGCAGGGTCTaGGCCTGGTTTGCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWNACRV*AWFAQD
Trigger: GTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATT...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAATAGCTCACCAGTTATaGACCAAGGAACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGDPSVHGSSWAMERASIAHQL*TKEQGQ
Trigger: CTGCCCCTGTTCCTTGGTCCATAACTGGTGAGCTAT...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTCTTGGGGCTGGGCCATaGCTGTGTCAGGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSILGAGP*LCQVGK
Trigger: TTTCCCTACCTGACACAGCCATGGCCCAGCCCCAAG...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGGAGGCCCCAGTTCACTaGTGCTCTCAAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQEAPVH*CSQRCP
Trigger: AGGACACCTTTGAGAGCATCAGTGAACTGGGGCCTC...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGTCCCATGCCACTGGCTaGCGGCCCAATGATGACATG +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVSHATG*RPNDDM
Trigger: CATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGA...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACTCCACTGCAGTGGGCTaGGAACTGCATTTGCGATGG +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHSTAVG*ELHLRW
Trigger: CCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGA...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGTCTGGTAAGTTTCTCTaGGAACACTCACCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLSGKFL*EHSPAR
Trigger: TCTTGCGGGTGAGTGTTCTCAGAGAAACTTACCAGA...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACCCCAGTGTGAAGTCCTaGCCAAAGGTGTTGCTCACG +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHPSVKS*PKVLLT
Trigger: CGTGAGCAACACCTTTGGGCAGGACTTCACACTGGG...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCTCTGGATCCGAGAAATaGCCACGATCTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPSGSEK*PRSARP
Trigger: CGGACGAGCAGATCGTGGGCATTTCTCGGATCCAGA...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGTCTGGATCCGAGAAATaGCCACGATCTGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWSGSEK*PRSARP
Trigger: CGGACGAGCAGATCGTGGGCATTTCTCGGATCCAGA...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGATCTTCCTCCCATCCTaGAGCAGGTACACCTTGACG +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWIFLPS*SRYTLT
Trigger: CGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGAT...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCGCCCACTCCTCTGCTaGAATCTGGACAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDRPLLC*NLDRET
Trigger: GGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCG...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGACTTCCTTGTATCCACTaGAGTGGGCTGAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGLPCIH*SGLRTA
Trigger: TGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAG...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGGCCCACCAAGACCTCTaGTGTCAGTATTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELAHQDL*CQYSLC
Trigger: GCAGAGAGAATACTGACAGCAGAGGTCTTGGTGGGC...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GATTTCGCTTCTAGGGAACTCAAGCTAGGAGACCCGGTGTCGGGGGCACCCACCGCCCACCAAGACCTCTaGTGTCAGTATTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DFASRELKLGDPVSGAPTAHQDL*CQYSLC
Trigger: GCAGAGAGAATACTGACAGCAGAGGTCTTGGTGGGC...GGTGGGTGCCCCCGACACCGGGTCTCCTAGCTTGAGTTCCCTAGAAGCGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACATGACAAGCTCTGCCTaGTCTCCTCCTACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYMTSSA*SPPTGA
Trigger: AGCCCCAGTAGGAGGAGAGCAGGCAGAGCTTGTCAT...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTATGCTCACCTCCACCTaGCCCAGTGTGAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPMLTST*PSVKSC
Trigger: GCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCAT...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGCTGGAGCACAATGGCTaGCACCGAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWLEHNG*HREDHG
Trigger: GCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAG...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTAGCGTGGCCAACATCTaGTTCCAATGTGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRASVANI*FQCVVP
Trigger: GGGAACCACACATTGGAACCAGATGTTGGCCACGCT...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp AGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAAACAGAGAGACCAGGATaGGTCATGAGGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RASDRAEWVPGSSSSIAQTERPG*VMRTLP
Trigger: TGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT...TTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGTCCTCTGCTGCAATCTaGACAGAGAGACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: ASDRAEWVPGSSSSIAQLSSAAI*TERPGW
Trigger: CCATCCTGGTCTCTCTGTCCAGATTGCAGCAGAGGA...CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCTTGTATCCACTGCAGTaGGCTGAGAACTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: SARGPQCSRLQLGYGEGILYPLQ*AENCIC
Trigger: GCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA...GATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGAGATCATGGCTTCGTTaGACACCGGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQRSWLR*TPGWGH
Trigger: ATGACCCCAACCCGGTGTTCAACGAAGCCATGATCT...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACAGATCATGGCTTCGTTaGACACCGGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYRSWLR*TPGWGH
Trigger: ATGACCCCAACCCGGTGTTCAACGAAGCCATGATCT...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR TCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGGGCATCAGACAGAGCTaGGTGGGTACCGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRGIRQS*VGTGLQ
Trigger: CTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCC...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGTTCTTGCCATGGTTaGGGTCCGGGGAGTAGATTT +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHGSCHG*GPGSRF
Trigger: AAATCTACTCCCCGGACCTCAACCATGGCAAGAACC...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGTCTGGTAAGTTTCTCTaGGAACACTCACCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWSGKFL*EHSPAR
Trigger: TCTTGCGGGTGAGTGTTCTCAGAGAAACTTACCAGA...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGCTCAGATGGTATTCTaGCACATCCACAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: QGTPVFTAPAGLWRGHQTAQMVF*HIHSHD
Trigger: ATCATGGCTGTGGATGTGGCAGAATACCATCTGAGC...TGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGGCTCAGATGGTATTCTaGCACATCCACAGCCATGAT +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQAQMVF*HIHSHD
Trigger: ATCATGGCTGTGGATGTGGCAGAATACCATCTGAGC...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCCCACAGGCTCACAGCTaGGATTCCCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSPQAHS*DSQQGQ
Trigger: CTGGCCCTGCTGGGAATCGCAGCTGTGAGCCTGTGG...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTCTTCTCCCTGGCCTCTaGGCAGCTCTCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPLLPGL*AALAVL
Trigger: AAGTACGGCGAGAGCTGCGCAGAGGCCAGGGAGAAG...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp GGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTCATCCTCATCGATaGCAAATACAGAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: GWVMRTLPGDPSVHGSSWAHPHR*QIQKTA
Trigger: TGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGC...CCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTCAGCCACTGAAGGGCTaGAGCGGGAGGTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPQPLKG*SGRSST
Trigger: TGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTG...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTTTGTGTGGCGTGCTGTaGGTTGAGGCCTTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MERASDRAEWVPGSSSSILCGVL*VEAFRR
Trigger: TCTCCTAAAGGCCTCAACCCACAGCACGCCACACAA...AATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp AAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGGGAACTCAGGAACGGAGAGGGGCTaGGGAAGCTCCCCGACGTCC +
Preference number: 4 (lower is better)
Translates to: KKLLAPESPSQISLLGNSGTERG*GSSPTS
Trigger: GGACGTCGGGGAGCTTCCCCAGCCCCTCTCCGTTCC...TGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGTGGGATCCAGGGGGATaGAGAACTTCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: QPFPALSHEGKKRLPGTAWDPGG*RTSHQR
Trigger: TCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCA...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCTCTGGTTCCAATGTGTaGTTCCCATGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPSGSNV*FPCHWL
Trigger: CAGCCAGTGGCATGGGAACCACACATTGGAACCAGA...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGCTCCATTGCCCAACTaGCCCGCCCTGGTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPAPLPN*PALVAS
Trigger: ACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGC...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGACAGAGAGACCAGGATaGGTCATGAGGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWTERPG*VMRTLP
Trigger: TGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGACAGAGAGACCAGGATaGGTCATGAGGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWTERPG*VMRTLP
Trigger: TGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp GTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTAGCCCCCAAGATTCACTaGGTTCCAGAACATAGCCCA +
Preference number: 4 (lower is better)
Translates to: VHGSSWAMERASDRAEWVAPKIH*VPEHSP
Trigger: TGGGCTATGTTCTGGAACCCAGTGAATCTTGGGGGC...TACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAACTGCATTTGCGATaGGGAAGTTCACATCCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRAELHLR*GSSHPA
Trigger: GGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTC...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTTGTATCCACTGCAGTaGGCTGAGAACTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGLYPLQ*AENCIC
Trigger: GCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGGGTCTGGGCCTCTTTaGACCTCTGGTTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVGSGPL*TSGSCH
Trigger: ATGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 72 bp CTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTaGTATCCACTGCAGTGGGCTGAGAACTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: LGLFSGPEKGPS*YPLQWAENCIC
Trigger: GCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCCACCCCACACAGCTGTaGCCCCTGGGTCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSHPTQL*PLGPSE
Trigger: TTCTGAAGGACCCAGGGGTCACAGCTGTGTGGGGTG...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR TCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGTCTTAAACGGCTCTaGCCCCAAAATTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQSLKRL*PQNSFS
Trigger: GGAGAAAGAATTTTGGGGTCAGAGCCGTTTAAGACT...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR TCA 90 bp CTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTAATAGAGCCAGCCACTaGAGGGCTGCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRTLTRKKLLAPESPSQINRASH*RAAAGG
Trigger: ACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATT...AATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACAGATCATGGCTTCGTTaGACACCGGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDRSWLR*TPGWGH
Trigger: ATGACCCCAACCCGGTGTTCAACGAAGCCATGATCT...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGCTCTTGAATTTAAAGTaGCAAGCTCGAGCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMELLNLK*QARALS
Trigger: AGACAGCGCTCGAGCTTGTCACTTTAAATTCAAGAG...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS-3UTR GCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGTCAAGGCAGCAGCGCTaGCAAATGTCCATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWSRQQR*QMSIKD
Trigger: GTCCTTTATGGACATTTGGCAGCGCTGCTGCCTTGA...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp CCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGGGACCTTTCTTGCCTCCATaGTTTTACTCGATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PFPALSHEGKKRLPGTAGPFLPP*FYSMQF
Trigger: GAACTGCATCGAGTAAAAGCATGGAGGCAAGAAAGG...TCCCGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCACCAAGCCCTTTCTTaGCTCCATGCTTTTACTCGA +
Preference number: 4 (lower is better)
Translates to: DPSVHGSSWAMERASDRAHQALS*LHAFTR
Trigger: TCGAGTAAAAGCATGGAGGCAAGAAAGGGCTTGGTG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp GCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGTACACTTTAAGCTTCTaGCACCACCATGCCCTACTC +
Preference number: 4 (lower is better)
Translates to: ASDRAEWVPGSSSSIAQLYTLSF*HHHALL
Trigger: GAGTAGGGCATGGTGGTGGCAGAAGCTTAAAGTGTA...CAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp TTGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCGCTCCAGGAGGTCCTTaGCCTGCATCACCGCCACGT +
Preference number: 4 (lower is better)
Translates to: LYPLQWAENCICDGEVHIAPGGP*PASPPR
Trigger: ACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGC...GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTATCTTCCTCCCATCCTaGAGCAGGTACACCTTGACG +
Preference number: 4 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTIFLPS*SRYTLT
Trigger: CGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGAT...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGCAGTGGGCTGAGAACTaGATTTGCGATGGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQQWAEN*ICDGEV
Trigger: AACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTG...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGGTCTGGGCCTGGTTTaGGCAGGACTGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSGLGLV*AGLSTR
Trigger: CCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACC...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGGCATCAACAAATGCTTaGAGGGTCTGGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NLDRETRMGHEDSARGPQASTNA*RVWAWF
Trigger: AAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGC...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCGCATCAACAAATGCTTaGAGGGTCTGGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPASTNA*RVWAWF
Trigger: AAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGC...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTAAGGGCATCAACAAATaGTTGCAGGGTCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTKGINK*LQGLGL
Trigger: CAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTT...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCATGTCAGTATTCTCTCTaGCCCACCCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSCQYSL*PTPATP
Trigger: GGGGGTGGCAGGGGTGGGGCAGAGAGAATACTGACA...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGAAGCCCCCTCTTCCTaGCCCAACTTTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWEAPSS*PNFILV
Trigger: AACCAAAATAAAGTTGGGGCAGGAAGAGGGGGCTTC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGGGGATGAGTGTCTTCTaGGCTTCCCGTACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRGMSVF*ASRTSP
Trigger: GGGGCTGGTACGGGAAGCCCAGAAGACACTCATCCC...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGTTGATGACGCTCAGATaGTATTCTGCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLLMTLR*YSATST
Trigger: TGTGGATGTGGCAGAATACCATCTGAGCGTCATCAA...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACTCTGGTTCCAATGTGTaGTTCCCATGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDSGSNV*FPCHWL
Trigger: CAGCCAGTGGCATGGGAACCACACATTGGAACCAGA...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTAGCGTGGCCAACATCTaGTTCCAATGTGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPSVANI*FQCVVP
Trigger: GGGAACCACACATTGGAACCAGATGTTGGCCACGCT...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCACGGGCCTGCGCAGCGTaGCCAACATCTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSRACAA*PTSGSN
Trigger: ATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCG...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCGGGCCTGCGCAGCGTaGCCAACATCTGGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRRACAA*PTSGSN
Trigger: ATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCG...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGCATTATGAGCCCAAGTaGCCTTCAGCTTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWHYEPK*PSASFF
Trigger: GAAAAAGGAAGCTGAAGGGCACTTGGGCTCATAATG...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp CCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCACATGCTTTTACTCGATaGAGTTCCTTTTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PAGLWRGHQTELSGYRAPHAFTR*SSFCLE
Trigger: TTCCAGGCAAAAGGAACTGCATCGAGTAAAAGCATG...TGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGGCTCATCCTCATCGATaGCAAATACAGAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWAHPHR*QIQKTA
Trigger: TGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGC...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCCGCCCACTCCTCTGCTaGAATCTGGACAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSRPLLC*NLDRET
Trigger: GGTCTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCG...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCACCACGCCCACTCCTCTaGTGCAATCTGGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSPRPLL*CNLDRE
Trigger: CTCTCTGTCCAGATTGCAGCAGAGGAGTGGGCGTGG...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACGCTGAGAACTGCATTTaGGATGGGGAAGTTCACATC +
Preference number: 4 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYAENCI*DGEVHI
Trigger: GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGC...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCTGTCAGTATTCTCTCTaGCCCACCCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LYPLQWAENCICDGEVHICQYSL*PTPATP
Trigger: GGGGGTGGCAGGGGTGGGGCAGAGAGAATACTGACA...GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGGGGATGACAAGCTCTaGCTGCTCTCCTCCTACTGG +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSGDDKL*LLSSYW
Trigger: CCAGTAGGAGGAGAGCAGGCAGAGCTTGTCATCCCC...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCCATGATGTCTGCTaGAGTGACTGTGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: RGPQCSRLQLGYGEGIRQSHDVC*SDCDLK
Trigger: TTTTAAGTCACAGTCACTGCAGCAGACATCATGGCT...CTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS-3UTR CCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCACATCACCCCAGGTCTTaGCCTCAACTTGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSHHPRS*PQLASQ
Trigger: CTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATG...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGTCTGGAATTCCTTTaGTTCAACTTGTTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGGLEFL*FNLFCH
Trigger: GTGACAGAACAAGTTGAACCAAAGGAATTCCAGACC...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCTGGGATCCAGGGGGATaGAGAACTTCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPWDPGG*RTSHQR
Trigger: TCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCA...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CCA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCGCTCCAGCTGGGCTATaGAGAGGGCATCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSAPAGL*RGHQTE
Trigger: CTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAACTGCATTTGCGATaGGGAAGTTCACATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTELHLR*GSSHPA
Trigger: GGCAGGATGTGAACTTCCCCATCGCAAATGCAGTTC...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCACATTCAGTCTTCTCCTaGCGTCCCTCAAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSHSVFS*RPSSRP
Trigger: AGGGCGGCTTGAGGGACGCCAGGAGAAGACTGAATG...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTATAGCTCACCAGTTATaGACCAAGGAACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTIAHQL*TKEQGQ
Trigger: CTGCCCCTGTTCCTTGGTCCATAACTGGTGAGCTAT...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTGCACCGCACAGCCACTaGGTTAGAGAAAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRTLTRKKLLAPESPSQIAPHSH*VRESRG
Trigger: ACCCCGACTTTCTCTAACCCAGTGGCTGTGCGGTGC...AATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGAAAAAGATAAAGCATTaGAAGGCACCTCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWKKIKH*KAPQGS
Trigger: GCTGCCTTGAGGTGCCTTGCAATGCTTTATCTTTTT...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGCGATGCAGTTCCTTTTaGCTGGAATGCCTTCTATTT +
Preference number: 4 (lower is better)
Translates to: SPSGPARASTNACRVWAWRCSSF*LECLLF
Trigger: AAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCG...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp TGCAATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCGCTCATCCTCATCGATaGCAAATACAGAAAACCGCA +
Preference number: 4 (lower is better)
Translates to: CNLDRETRMGHEDSARGPAHPHR*QIQKTA
Trigger: TGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGC...GGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR GCA 90 bp TTGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCTGGTGCCTAGCACAGTaGCTGGCCCCCAAGATTCAC +
Preference number: 4 (lower is better)
Translates to: LYPLQWAENCICDGEVHIWCLAQ*LAPKIH
Trigger: GTGAATCTTGGGGGCCAGGCACTGTGCTAGGCACCA...GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGAAGCCCCCTCTTCCTaGCCCAACTTTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVEAPSS*PNFILV
Trigger: AACCAAAATAAAGTTGGGGCAGGAAGAGGGGGCTTC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGCCACTTTCCCAGGTCTaGAATTCCTTTGGTTCAACT +
Preference number: 4 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWPLSQV*NSFGST
Trigger: AGTTGAACCAAAGGAATTCCAGACCTGGGAAAGTGG...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGTGGGATCCAGGGGGATaGAGAACTTCTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVWDPGG*RTSHQR
Trigger: TCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCA...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCCTGGAGCACAATGGCTaGCACCGAGAAGATCATGGC +
Preference number: 4 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSLEHNG*HREDHG
Trigger: GCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAG...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTGATAATTTGTTGGCCTaGGTCTCCATAGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPDNLLA*VSIAHQ
Trigger: CTGGTGAGCTATGGAGACCCAGGCCAACAAATTATC...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
3UTR CAA 72 bp CTGGTTCTTGCCATGGTTGAGGTCCGGGGAGTAGATTaGACAGAGAATAACTCCGGAGCCAGTGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LVLAMVEVRGVD*TENNSGASVPR
Trigger: ACGTGGAACACTGGCTCCGGAGTTATTCTCTGTCAAATCTACTCCCCGGACCTCAACCATGGCAAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR TCA 90 bp AGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGTGTTTGTGTGTTATGTaGCATATTTGTGTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SVHGSSWAMERASDRAEWCLCVM*HICVAC
Trigger: GCACGCCACACAAATATGTCACATAACACACAAACA...CCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CCA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGTTGATGACGCTCAGATaGTATTCTGCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVLMTLR*YSATST
Trigger: TGTGGATGTGGCAGAATACCATCTGAGCGTCATCAA...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGGCCCCCAAGATTCACTaGGTTCCAGAACATAGCCCA +
Preference number: 4 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRAPKIH*VPEHSP
Trigger: TGGGCTATGTTCTGGAACCCAGTGAATCTTGGGGGC...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACTCCTTTTGCCTGGAATaGCTTCTATTTGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHSFCLE*LLFASF
Trigger: GAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGA...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp AAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGGGAACTCAAATGTGTGGTTCCCATaGCACTGGCTGACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KKLLAPESPSQISLLGNSNVWFP*HWLTAQ
Trigger: TTGGGCCGTCAGCCAGTGGCATGGGAACCACACATT...TGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCTAGCGCAGTTCCTTTTGCCTaGAATGCCTTCTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: PLQAQLLPCQRGPSCFPSAVPFA*NAFYLL
Trigger: AAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGC...GCTAGGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR GCA 90 bp TTGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCGCTGAGAACTGCATTTaGGATGGGGAAGTTCACATC +
Preference number: 4 (lower is better)
Translates to: LYPLQWAENCICDGEVHIAENCI*DGEVHI
Trigger: GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGC...GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp AAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGGGAACTCACAGTGGGCTGAGAACTaGATTTGCGATGGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KKLLAPESPSQISLLGNSQWAEN*ICDGEV
Trigger: AACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTG...TGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CCA 90 bp CTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTTGATGACGCTCAGATaGTATTCTGCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: LRTLTRKKLLAPESPSQILMTLR*YSATST
Trigger: TGTGGATGTGGCAGAATACCATCTGAGCGTCATCAA...AATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR GCA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAGGAATGCCTTCTATTTaGTTCTTTCCAGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: FSENTHPQETTCPRIPLSGMPSI*FFPEDV
Trigger: TACATCCTCTGGAAAGAAGCAAATAGAAGGCATTCC...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp GGGAGGCCCCTGGGTAAGGCTGGGGACAGGCCATGGTGCAGTCCCTaGGAAGGCCCTTCGCCCACGAGCCCGACGCAGGGCATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: GRPLGKAGDRPWCSP*EGPSPTSPTQGMRV
Trigger: AACTCTCATGCCCTGCGTCGGGCTCGTGGGCGAAGGGCCTTCCCAGGGACTGCACCATGGCCTGTCCCCAGCCTTACCCAGGGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGCTCGCGCTCGCCCGCTaGCCCGCCCGCTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRLALAR*PARSLL
Trigger: CAAGAGGGAGCGGGCGGGCAAGCGGGCGAGCGCGAG...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGACGAAGGTGATTCAGGGCCGAGCAGGGCTCCCTGGAAGCCCCCTCTTCCTGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: ETKVIQGRAGLPGSPLFLAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...CAGGAAGAGGGGGCTTCCAGGGAGCCCTGCTCGGCCCTGAATCACCTTCGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp CTCGCGCTCGCCCGCTTGCCCGCCCGCTCCCTCTTGAATTTAAAGTaGCAAGCTCGAGCGCTGTCTCTGCTCCTGGGGTCCGAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LALARLPARSLLNLK*QARALSLLLGSEPE
Trigger: CTCCGGCTCGGACCCCAGGAGCAGAGACAGCGCTCGAGCTTGTCACTTTAAATTCAAGAGGGAGCGGGCGGGCAAGCGGGCGAGCGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS GCA 90 bp CAGGACTCGAAGCTGGCCTCCTCCCGCTCCAGGAGGTCCTTGCCCTaGATCACCGCCACGTTCAGCGTGTGGGAGGCAGTGTCGTACTCC +
Preference number: 5 (lower is better)
Translates to: QDSKLASSRSRRSLP*ITATFSVWEAVSYS
Trigger: GGAGTACGACACTGCCTCCCACACGCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCGGGAGGAGGCCAGCTTCGAGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGCGCTCCAGGAGGTCCTaGCCCTGCATCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVERSRRS*PCITAT
Trigger: CGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCG...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGCGCTCCAGGAGGTCCTaGCCCTGCATCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMRSRRS*PCITAT
Trigger: CGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCG...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp TCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCACTGGCCCGCCCTGGTaGCTAGTTTCGCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: SARGPQCSRLQLGYGEGITGPPW*LVSPDS
Trigger: GCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGT...GATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp GCTCTCAAAGGTGTCCTCAATGCTGAGACTGCCTTTGCGGCTGGGTaGTCCCCGCGTGCTGGCCCGCTGGGCATTCCAGGCAGGCACTCT +
Preference number: 5 (lower is better)
Translates to: ALKGVLNAETAFAAG*SPRAGPLGIPGRHS
Trigger: AGAGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCTTTGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393946.6
ENST00000525149.1
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CCA 90 bp ACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTaGCCCGCCCTGGTTGCTAGTTTCGCCGGACAGCGTGCCACATGG +
Preference number: 5 (lower is better)
Translates to: TELSGYRAPAAPLPN*PALVASFAGQRATW
Trigger: CCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGATGCTGAGACTGCCTTaGCGGCTGGGTGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWMLRLP*RLGGPR
Trigger: GCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCAT...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCATGCTGAGACTGCCTTaGCGGCTGGGTGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: GPQCSRLQLGYGEGIRQSMLRLP*RLGGPR
Trigger: GCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCAT...GCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGATGCTGAGACTGCCTTaGCGGCTGGGTGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVEMLRLP*RLGGPR
Trigger: GCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCAT...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGCGCTCCAGGAGGTCCTaGCCCTGCATCACCGCCACG +
Preference number: 5 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELRSRRS*PCITAT
Trigger: CGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCG...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp GACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCGGGTCCGCTGTGGTCTaGTCGTTGGTCCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: DRAEWVPGSSSSIAQLARGSAVV*SLVQMR
Trigger: CCTCATCTGGACCAACGACAAGACCACAGCGGACCC...GCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRMTWPT*SPRPSL
Trigger: CAGCGACGGCCGTGGGGACAACGTGGGCCATGTCAT...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCACTGGCCCGCCCTGGTaGCTAGTTTCGCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLTGPPW*LVSPDS
Trigger: GCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGT...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGCCCGGGCCTGGTCTCTaGGTCTCTTCTCCGGCCCCG +
Preference number: 5 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWPGPGL*VSSPAP
Trigger: CGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGG...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTTTCCCCCCGGGCCTGGTCTCTaGGTCTCTTCTCCGGCCCCG +
Preference number: 5 (lower is better)
Translates to: PAPPSTAPTLSKRPFLFPPGPGL*VSSPAP
Trigger: CGGGGCCGGAGAAGAGACCAAGAGACCAGGCCCGGG...GGGAAACAGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCGTAGACAGCCTGGCCTaGGGGCTGGGCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ERASDRAEWVPGSSSSIAVDSLA*GLGHGC
Trigger: ACAGCCATGGCCCAGCCCCAAGGCCAGGCTGTCTAC...GGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp GCAGTCCCTGGGAAGGCCCTTCGCCCACGAGCCCGACGCAGGGCATaGGAGTTCCTCAGTCTCAGGCTCCCCTTAGGGATGAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AVPGKALRPRARRRA*EFLSLRLPLGMSVF
Trigger: GAAGACACTCATCCCTAAGGGGAGCCTGAGACTGAGGAACTCTCATGCCCTGCGTCGGGCTCGTGGGCGAAGGGCCTTCCCAGGGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp GTGTCTTCTGGGCTTCCCGTACCAGCCCCTCTGGGCCAGGAGATCTaGAGCCCTGCTGTGGTTCCTTCGGCCTCCTACTCACTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: VSSGLPVPAPLGQEI*SPAVVPSASYSLGS
Trigger: GCTACCCAGTGAGTAGGAGGCCGAAGGAACCACAGCAGGGCTCCAGATCTCCTGGCCCAGAGGGGCTGGTACGGGAAGCCCAGAAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp CCCCTTAGGGATGAGTGTCTTCTGGGCTTCCCGTACCAGCCCCTCTaGGCCAGGAGATCTGGAGCCCTGCTGTGGTTCCTTCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PLRDECLLGFPYQPL*ARRSGALLWFLRPP
Trigger: AGGAGGCCGAAGGAACCACAGCAGGGCTCCAGATCTCCTGGCCCAGAGGGGCTGGTACGGGAAGCCCAGAAGACACTCATCCCTAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp CAATGTGTGGTTCCCATGCCACTGGCTGACGGCCCAATGATGACATaGCCCACGTTGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: QCVVPMPLADGPMMT*PTLSPRPSLLLSAT
Trigger: GGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGAACCACACATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp AACTGGCCCGCCCTGGTTGCTAGTTTCGCCGGACAGCGTGCCACATaGACACGGGCCTGCGCAGCGTGGCCAACATCTGGTTCCAATGTG +
Preference number: 5 (lower is better)
Translates to: NWPALVASFAGQRAT*TRACAAWPTSGSNV
Trigger: CACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp TGGCTAGAGGGCAGGACCAGAGGCCCAAGGTCTCTAAGCAGGCTGTaGGCACAGCCAGGTGGCAAAGCAGGTTCAGGCTCCCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: WLEGRTRGPRSLSRL*AQPGGKAGSGSPVP
Trigger: AGGCACAGGGGAGCCTGAACCTGCTTTGCCACCTGGCTGTGCCCACAGCCTGCTTAGAGACCTTGGGCCTCTGGTCCTGCCCTCTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAACCCCCGTGCTGACGTaGCGCTCATCCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: LPGDPSVHGSSWAMERASTPVLT*RSSSSM
Trigger: CATCGATGAGGATGAGCGCAACGTCAGCACGGGGGT...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCGGGTCCGCTGTGGTCTaGTCGTTGGTCCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSGSAVV*SLVQMR
Trigger: CCTCATCTGGACCAACGACAAGACCACAGCGGACCC...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATGGGTCCGCTGTGGTCTaGTCGTTGGTCCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: LCQGTPVFTAPAGLWRGHGSAVV*SLVQMR
Trigger: CCTCATCTGGACCAACGACAAGACCACAGCGGACCC...ATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: NLDRETRMGHEDSARGPQAPAAP*PNWPAL
Trigger: CAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGC...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp GTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGGGTCTGGGCCTGGTTaGCGCAGGACTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: VMRTLPGDPSVHGSSWAMGSGPG*RRTEHK
Trigger: CTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCC...CATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGCCCGAGAGCCTCCTaGTCCACCACATCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: SARGPQCSRLQLGYGEGISPRAS*STTSSQ
Trigger: CTGCGAAGATGTGGTGGACAAGGAGGCTCTCGGGCT...GATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS GCA 90 bp CCTGCTGTGGTTCCTTCGGCCTCCTACTCACTGGGTAGCCTACCCTaGCTCTCCATCACCCCAGGTCTTGGCCTCAACTTGCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PAVVPSASYSLGSLP*LSITPGLGLNLPPR
Trigger: CCTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGGTAGGCTACCCAGTGAGTAGGAGGCCGAAGGAACCACAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS GCA 90 bp GGGCCAAGCTGGGACAGCCAATGCCCGCAGCACGCGAGCAAGGTATaGATGGCAAAGTACACCCCACAGCACAACAGGCGTGGTACGGGA +
Preference number: 5 (lower is better)
Translates to: GPSWDSQCPQHASKV*MAKYTPQHNRRGTG
Trigger: TCCCGTACCACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS CCA 90 bp ACAGCGTGCCACATGGACACGGGCCTGCGCAGCGTGGCCAACATCTaGTTCCAATGTGTGGTTCCCATGCCACTGGCTGACGGCCCAATG +
Preference number: 5 (lower is better)
Translates to: TACHMDTGLRSVANI*FQCVVPMPLADGPM
Trigger: CATTGGGCCGTCAGCCAGTGGCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp AGTTTCGCCGGACAGCGTGCCACATGGACACGGGCCTGCGCAGCGTaGCCAACATCTGGTTCCAATGTGTGGTTCCCATGCCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: SFAGQRATWTRACAA*PTSGSNVWFPCHWL
Trigger: CAGCCAGTGGCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp ACAAAGAGATCCATGGAGGCTCCCGGGCCCCGCCCTGCTAAGGCTTaGTGTATTCTGGGAGTCCTGGGAACAGGGTCACAGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TKRSMEAPGPRPAKA*CILGVLGTGSQQGW
Trigger: CCAGCCCTGCTGTGACCCTGTTCCCAGGACTCCCAGAATACACCAAGCCTTAGCAGGGCGGGGCCCGGGAGCCTCCATGGATCTCTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp ACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGGTCTTGGCCTCAACTaGCCTCCCAGGTGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: TAPAGLWRGHQTELSGYRGLGLN*PPRCSG
Trigger: GCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGACC...CCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCACCCCCGTGCTGACGTaGCGCTCATCCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLTPVLT*RSSSSM
Trigger: CATCGATGAGGATGAGCGCAACGTCAGCACGGGGGT...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCTCGTTGAACACCGGGTaGGGGTCATCCCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSSLNTG*GSSLFT
Trigger: CGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGA...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp CGTGGCCAACATCTGGTTCCAATGTGTGGTTCCCATGCCACTGGCTaGCGGCCCAATGATGACATGGCCCACGTTGTCCCCACGGCCGTC +
Preference number: 5 (lower is better)
Translates to: RGQHLVPMCGSHATG*RPNDDMAHVVPTAV
Trigger: GACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGAACCACACATTGGAACCAGATGTTGGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 90 bp CCTGCCGCTGTTGACAGAATGTCACCTGTGGGCTACGTATGCCCATaGCAAAGAGATCCATGGAGGCTCCCGGGCCCCGCCCTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: PAAVDRMSPVGYVCP*QRDPWRLPGPALLR
Trigger: CCTTAGCAGGGCGGGGCCCGGGAGCCTCCATGGATCTCTTTGTCATGGGCATACGTAGCCCACAGGTGACATTCTGTCAACAGCGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp CTGGTTGCTAGTTTCGCCGGACAGCGTGCCACATGGACACGGGCCTaGGCAGCGTGGCCAACATCTGGTTCCAATGTGTGGTTCCCATGC +
Preference number: 5 (lower is better)
Translates to: LVASFAGQRATWTRA*AAWPTSGSNVWFPC
Trigger: GCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 90 bp AGGGACGGAGGAGAGATCTGCCTCCAGACAGACTGGGTCCAGATCTaGACCTATAACCCCACCACCAGGTGCCAGGACTCAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RDGGEICLQTDWVQI*TYNPTTRCQDSGRQ
Trigger: CTGCCTGCCTGAGTCCTGGCACCTGGTGGTGGGGTTATAGGTGCAGATCTGGACCCAGTCTGTCTGGAGGCAGATCTCTCCTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp AGGAGATCTGGAGCCCTGCTGTGGTTCCTTCGGCCTCCTACTCACTaGGTAGCCTACCCTGCCTCTCCATCACCCCAGGTCTTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RRSGALLWFLRPPTH*VAYPASPSPQVLAS
Trigger: TGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGGTAGGCTACCCAGTGAGTAGGAGGCCGAAGGAACCACAGCAGGGCTCCAGATCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp GCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTGCCCACTCCCGTAACTaGCTCATCCTTCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: APAGLWRGHQTELSGYRAAHSRN*LILQDL
Trigger: CAGGTCCTGAAGGATGAGCAAGTTACGGGAGTGGGC...AGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp CCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACGTCCAGATGAGGTTCTaGGCCTTAACCACGACCACG +
Preference number: 5 (lower is better)
Translates to: PGDPSVHGSSWAMERASDVQMRF*ALTTTT
Trigger: CGTGGTCGTGGTTAAGGCCAAGAACCTCATCTGGAC...GTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp AGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGTCGTTGAACACCGGGTaGGGGTCATCCCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: RMGHEDSARGPQCSRLQLSLNTG*GSSLFT
Trigger: CGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGA...CAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDMTWPT*SPRPSL
Trigger: CAGCGACGGCCGTGGGGACAACGTGGGCCATGTCAT...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACACTGGCCCGCCCTGGTaGCTAGTTTCGCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: QQMLAGSGPGLRRTEHKDTGPPW*LVSPDS
Trigger: GCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGT...GTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCCAGAACATAGCCCAGCTCGGCAGCTGGCCTACCGGGAGGAGCAGGGTTGAGTGGGTCTGGGCCTCTTaGGACCTCTGGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FQNIAQLGSWPTGRSRVEWVWAS*DLWFLP
Trigger: TGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCCA...CTCAACCCTGCTCCTCCCGGTAGGCCAGCTGCCGAGCTGGGCTATGTTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGAGCCCGAGAGCCTCCTaGTCCACCACATCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWSPRAS*STTSSQ
Trigger: CTGCGAAGATGTGGTGGACAAGGAGGCTCTCGGGCT...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGCCAAGGCGATGGATCTaGAAGCCACACTTGCGTGGC +
Preference number: 5 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEPRRWI*KPHLRG
Trigger: GCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGG...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCCAGGCTGCAAAGCCTaGTCCAGCCATGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ETRMGHEDSARGPQCSRLPGCKA*SSHVSP
Trigger: AGGAGACACATGGCTGGACAAGGCTTTGCAGCCTGG...GAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS GCA 90 bp GTAGCCTACCCTGCCTCTCCATCACCCCAGGTCTTGGCCTCAACTTaGCTCCCAGGTGTTCAGGCGCCCTTAACCCCATCAGGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: VAYPASPSPQVLAST*LPGVQAPLTPSGSP
Trigger: TGGACTTCCTGATGGGGTTAAGGGCGCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGGTAGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp CCTGCTTACCTGGCACAAGCTGACTTTGCAAGAGTGGGGCCAAGCTaGGACAGCCAATGCCCGCAGCACGCGAGCAAGGTATGCATGGCA +
Preference number: 5 (lower is better)
Translates to: PAYLAQADFARVGPS*DSQCPQHASKVCMA
Trigger: TGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGCCAGGTAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp CCAGGACAGGGGAACAGCGTGTGCAAAGCGCTGCCACTGGAAGAGTaGCGTTTGCACCATGCTGGGCGCTGCACAACCATCAGCTCTCTA +
Preference number: 5 (lower is better)
Translates to: PGQGNSVCKALPLEE*RLHHAGRCTTISSL
Trigger: TAGAGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp TGGAGACAGCCTGAAGGTCCCACCGAGGGGGCCAGTGAGGGCTGGTaGCTCTGTCTTGGGAGGAAATGTCACTGGCCTTCGAGAATGACA +
Preference number: 5 (lower is better)
Translates to: WRQPEGPTEGASEGW*LCLGRKCHWPSRMT
Trigger: TGTCATTCTCGAAGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCTCACTGGCCCCCTCGGTGGGACCTTCAGGCTGTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp ATCTGGAGACAGCCTGAAGGTCCCACCGAGGGGGCCAGTGAGGGCTaGTGGCTCTGTCTTGGGAGGAAATGTCACTGGCCTTCGAGAATG +
Preference number: 5 (lower is better)
Translates to: IWRQPEGPTEGASEG*WLCLGRKCHWPSRM
Trigger: CATTCTCGAAGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCTCACTGGCCCCCTCGGTGGGACCTTCAGGCTGTCTCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGTGGCGTGCTGTGGGTaGAGGCCTTTAGGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGVACCG*RPLGER
Trigger: TCTTTCTCCTAAAGGCCTCAACCCACAGCACGCCAC...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGGTCCAGATGAGGTTCTaGGCCTTAACCACGACCACG +
Preference number: 5 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWVQMRF*ALTTTT
Trigger: CGTGGTCGTGGTTAAGGCCAAGAACCTCATCTGGAC...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGTCCAGATGAGGTTCTaGGCCTTAACCACGACCACG +
Preference number: 5 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEVQMRF*ALTTTT
Trigger: CGTGGTCGTGGTTAAGGCCAAGAACCTCATCTGGAC...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGGAGAAAGGCCCTTCCTaGTATCCACTGCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEEKGPS*YPLQWA
Trigger: AGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTC...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TCTTGGTCTCTTCTCCGGCCCCGAGAAAGGCCCTTCCTTGTATCCACTGCAGTGGGGTCTGGGCCTGGTTaGCGCAGGACTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: SWSLLRPRERPFLVSTAVGSGPG*RRTEHK
Trigger: CTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCC...CACTGCAGTGGATACAAGGAAGGGCCTTTCTCGGGGCCGGAGAAGAGACCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCGGCATCAACAAATGCTaGCAGGGTCTGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: ERASDRAEWVPGSSSSIAGINKC*QGLGLV
Trigger: AACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCC...GGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TGCTCAGGCTGGGCCCGCTGCCTGCGACATGCTCAGTTCTTTTCCTGCCCCTCCATCTTGAAGCCACACTaGCGTGGCTTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: CSGWARCLRHAQFFSCPSILKPH*RGFLHP
Trigger: TGGATGGAGGAAGCCACGCAAGTGTGGCTTCAAGAT...GGAGGGGCAGGAAAAGAACTGAGCATGTCGCAGGCAGCGGGCCCAGCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTCCAGGCTGCAAAGCCTaGTCCAGCCATGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DPSVHGSSWAMERASDRAPGCKA*SSHVSP
Trigger: AGGAGACACATGGCTGGACAAGGCTTTGCAGCCTGG...AGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp CCTGATGCTGCCCCCACTCCCACAAGGAGATGTGCGTTGTCATGGTaGTGGAAGGGTGGTGCTAAGCCAGGAAGGGCTTCACCCATCCTG +
Preference number: 5 (lower is better)
Translates to: PDAAPTPTRRCALSW*WKGGAKPGRASPIL
Trigger: CAGGATGGGTGAAGCCCTTCCTGGCTTAGCACCACCCTTCCATCACCATGACAACGCACATCTCCTTGTGGGAGTGGGGGCAGCATCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp GTGTCGTACTCCATGCTCACCTCCACCTGGCCCAGTGTGAAGTCCTaGCCAAAGGTGTTGCTCACGGAGGAGATGGAGTTCAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VSYSMLTSTWPSVKS*PKVLLTEEMEFRES
Trigger: CGACTCCCTGAACTCCATCTCCTCCGTGAGCAACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCATGGAGTACGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS GCA 90 bp GCACAAGCTGACTTTGCAAGAGTGGGGCCAAGCTGGGACAGCCAATaGCCGCAGCACGCGAGCAAGGTATGCATGGCAAAGTACACCCCA +
Preference number: 5 (lower is better)
Translates to: AQADFARVGPSWDSQ*PQHASKVCMAKYTP
Trigger: TGGGGTGTACTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS GCA 90 bp TGGTATGTTTCTTCTCTGACCCCATCCGCTGTCCATGGGGAGGGCTaGAGGAGTATGTCTGGAGTCTCGAGGCATCTCCCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WYVSSLTPSAVHGEG*RSMSGVSRHLPASS
Trigger: GGAGCTGGCTGGGAGATGCCTCGAGACTCCAGACATACTCCTGCAGCCCTCCCCATGGACAGCGGATGGGGTCAGAGAAGAAACATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp CAAGCTGGGACAGCCAATGCCCGCAGCACGCGAGCAAGGTATGCATaGCAAAGTACACCCCACAGCACAACAGGCGTGGTACGGGACAAA +
Preference number: 5 (lower is better)
Translates to: QAGTANARSTRARYA*QSTPHSTTGVVRDK
Trigger: TTTGTCCCGTACCACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS CCA 90 bp ATGAGGAAGCTGAGGGACGGAGGAGAGATCTGCCTCCAGACAGACTaGGTCCAGATCTGCACCTATAACCCCACCACCAGGTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: MRKLRDGGEICLQTD*VQICTYNPTTRCQD
Trigger: GTCCTGGCACCTGGTGGTGGGGTTATAGGTGCAGATCTGGACCCAGTCTGTCTGGAGGCAGATCTCTCCTCCGTCCCTCAGCTTCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp TTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGTCTGGGCTGTGGTCTTGTCGTaGGTCCAGATGAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LQGLGLVCAGLSTRTWVWAVVLS*VQMRFL
Trigger: CAAGAACCTCATCTGGACCAACGACAAGACCACAGC...CCAGACCCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACTCGTTGAACACCGGGTaGGGGTCATCCCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: TERPGWVMRTLPGDPSVHSLNTG*GSSLFT
Trigger: CGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGA...GTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGGAGAAAGGCCCTTCCTaGTATCCACTGCAGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PSVHGSSWAMERASDRAEEKGPS*YPLQWA
Trigger: AGCCCACTGCAGTGGATACAAGGAAGGGCCTTTCTC...CTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACTGGGTCTGGGCCTCTTaGGACCTCTGGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYWVWAS*DLWFLP
Trigger: TGGCAAGAACCAGAGGTCCAAAGAGGCCCAGACCCA...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGATCTTGAAGCCACACTaGCGTGGCTTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: MRTLPGDPSVHGSSWAMEILKPH*RGFLHP
Trigger: TGGATGGAGGAAGCCACGCAAGTGTGGCTTCAAGAT...CTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTCCAAGGCGATGGATCTaGAAGCCACACTTGCGTGGC +
Preference number: 5 (lower is better)
Translates to: PVFTAPAGLWRGHQTELSPRRWI*KPHLRG
Trigger: GCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGG...ACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp CAGCATCGGCGGCCTTGTTCTGGTCCTGTAAATAGAGCCAGCCACTaGAGGGCTGCAGCGGGAGGTCAAGCACAGAAAGCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: QHRRPCSGPVNRASH*RAAAGGQAQKASAP
Trigger: TGGAGCTGAAGCTTTCTGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATTTACAGGACCAGAACAAGGCCGCCGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp GAGCAAGGTATGCATGGCAAAGTACACCCCACAGCACAACAGGCGTaGTACGGGACAAAGCCTCAAGCTGCATCTGGCCTCTGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: EQGMHGKVHPTAQQA*YGTKPQAASGLWLS
Trigger: CGACAGCCAGAGGCCAGATGCAGCTTGAGGCTTTGTCCCGTACCACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCATACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS-3UTR CAA 90 bp ACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGGCTGTGGTCTTGTCGTaGGTCCAGATGAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TPVFTAPAGLWRGHQTELAVVLS*VQMRFL
Trigger: CAAGAACCTCATCTGGACCAACGACAAGACCACAGC...CAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGAAGATCATGGCTTCGTaGAACACCGGGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: HQTELSGYRAPAAPLPNWKIMAS*NTGLGS
Trigger: TGACCCCAACCCGGTGTTCAACGAAGCCATGATCTT...CCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp CATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGTCCGGGGAGTAGATTaGACAGAGAATAACTCCGGA +
Preference number: 5 (lower is better)
Translates to: HEDSARGPQCSRLQLGYGVRGVD*TENNSG
Trigger: TCCGGAGTTATTCTCTGTCAAATCTACTCCCCGGAC...TCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CACAGCGATCAGGCCAAGGCGATGGATCTTGAAGCCACACTTGCGTGGCTTCCTTTGGACCTCTGGTTCTaGCCATGGTTGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: HSDQAKAMDLEATLAWLPLDLWF*PWLRSG
Trigger: CCCGGACCTCAACCATGGCAAGAACCAGAGGTCCAA...AGGAAGCCACGCAAGTGTGGCTTCAAGATCCATCGCCTTGGCCTGATCGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CAGCCCTTCCCAGCACTCAGCCATGAAGGCAAGAAGCGGCTTCCTGGGACTGCGACTGGGGATAATTTGTaGGCCTGGGTCTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: QPFPALSHEGKKRLPGTATGDNL*AWVSIA
Trigger: AGCTATGGAGACCCAGGCCAACAAATTATCCCCAGT...CGCAGTCCCAGGAAGCCGCTTCTTGCCTTCATGGCTGAGTGCTGGGAAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCATCACTGGGGATAATTaGTTGGCCTGGGTCTCCATA +
Preference number: 5 (lower is better)
Translates to: PGWVMRTLPGDPSVHGSSITGDN*LAWVSI
Trigger: TATGGAGACCCAGGCCAACAAATTATCCCCAGTGAT...GCTGGAGCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp ATGCTCAGTTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGGTAGACAGCCTGGCCTaGGGGCTGGGCCATGGCTGT +
Preference number: 5 (lower is better)
Translates to: MLSSFPAPPSTAPTLSKRVDSLA*GLGHGC
Trigger: ACAGCCATGGCCCAGCCCCAAGGCCAGGCTGTCTAC...CCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAACTGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp GCGGGAGGTCAAGCACAGAAAGCTTCAGCTCCACCACCCCCGTGCTaGCGTTGCGCTCATCCTCATCGATGCCAAATACAGAAAACCGCA +
Preference number: 5 (lower is better)
Translates to: AGGQAQKASAPPPPC*RCAHPHRCQIQKTA
Trigger: TGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGGAGCTGAAGCTTTCTGTGCTTGACCTCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 90 bp GGTGATGGAAGGGTGGTGCTAAGCCAGGAAGGGCTTCACCCATCCTaGCTAGAGTGGAAGCTCATTCCTGGGCCTGGGCTGGAGATAATG +
Preference number: 5 (lower is better)
Translates to: GDGRVVLSQEGLHPS*LEWKLIPGPGLEIM
Trigger: CATTATCTCCAGCCCAGGCCCAGGAATGAGCTTCCACTCTAGTCAGGATGGGTGAAGCCCTTCCTGGCTTAGCACCACCCTTCCATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 90 bp GTGTATGTGGGAGTCCTGGAAAAAGGAATTTGGGATGGGCTGCACTaGTCTCAGGTCAAGGGCACCGAGGGCCAGGATAATGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: VYVGVLEKGIWDGLH*SQVKGTEGQDNAHP
Trigger: GGGGTGGGCATTATCCTGGCCCTCGGTGCCCTTGACCTGAGATCAGTGCAGCCCATCCCAAATTCCTTTTTCCAGGACTCCCACATACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp TGTAGTTCAGAGAGGTGGTTACACATGGTAAGCCTGCAGGCCTGGTaGAGGGTGGTAGGGCAAGGGGAAGGGGAGGTAAGAACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CSSERWLHMVSLQAW*RVVGQGEGEVRTAE
Trigger: CTCTGCAGTTCTTACCTCCCCTTCCCCTTGCCCTACCACCCTGCACCAGGCCTGCAGGCTTACCATGTGTAACCACCTCTCTGAACTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp AAAGCGCTGCCACTGGAAGAGTGGCGTTTGCACCATGCTGGGCGCTaGACAACCATCAGCTCTCTAAATCTTCCCAACAGCCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KALPLEEWRLHHAGR*TTISSLNLPNSPEA
Trigger: TGCCTCAGGGCTGTTGGGAAGATTTAGAGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp GCTTCCAGGCAAGTCACCCAGCACCTCTGGGCTTCATACTCCGTTTaGAAAATGCGGATGACAAGAACATCCCCCATCCAGCGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ASRQVTQHLWASYSV*KMRMTRTSPIQRSH
Trigger: GTGGGACCGCTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTGCCTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp CCGGGCACCGGTACCTTGGCTTCCAGGCAAGTCACCCAGCACCTCTaGGCTTCATACTCCGTTTGGAAAATGCGGATGACAAGAACATCC +
Preference number: 5 (lower is better)
Translates to: PGTGTLASRQVTQHL*ASYSVWKMRMTRTS
Trigger: GGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTGCCTGGAAGCCAAGGTACCGGTGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp TCTCCCAGTGGGCCTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGACACCAAGCCCTTTCTaGCCTCCATGCTTTTACTCG +
Preference number: 5 (lower is better)
Translates to: SPSGPARASTNACRVWAWTPSPF*PPCFYS
Trigger: CGAGTAAAAGCATGGAGGCAAGAAAGGGCTTGGTGT...CCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAGGCCCACTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp AAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTGAGCACAAGGACCTGGGCTGTGGTCTTGTCGTaGGTCCAGATGAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KCLQGLGLVCAGLSTRTWAVVLS*VQMRFL
Trigger: CAAGAACCTCATCTGGACCAACGACAAGACCACAGC...CCAGGTCCTTGTGCTCAGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGAAGATCATGGCTTCGTaGAACACCGGGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: NLDRETRMGHEDSARGPQKIMAS*NTGLGS
Trigger: TGACCCCAACCCGGTGTTCAACGAAGCCATGATCTT...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACAAGATCATGGCTTCGTaGAACACCGGGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYKIMAS*NTGLGS
Trigger: TGACCCCAACCCGGTGTTCAACGAAGCCATGATCTT...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 90 bp GGTCCTGGAGCACAATGGCTGGCACCGAGAAGATCATGGCTTCGTTaGACACCGGGTTGGGGTCATCCCTCTTCACGGCTGTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GPGAQWLAPRRSWLR*TPGWGHPSSRLSSF
Trigger: AAAAGAAGACAGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 90 bp AGTGGGTGTATGTGGGAGTCCTGGAAAAAGGAATTTGGGATGGGCTaGACTGATCTCAGGTCAAGGGCACCGAGGGCCAGGATAATGCCC +
Preference number: 5 (lower is better)
Translates to: SGCMWESWKKEFGMG*TDLRSRAPRARIMP
Trigger: GGGCATTATCCTGGCCCTCGGTGCCCTTGACCTGAGATCAGTGCAGCCCATCCCAAATTCCTTTTTCCAGGACTCCCACATACACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp GTCACCATGTACCTGCCCAAGGTGGTCCTAGCTCCTGGCGGAAGCTaGTCTGGATACGCTGAAACACATGCTAATGTACACACACGCACC +
Preference number: 5 (lower is better)
Translates to: VTMYLPKVVLAPGGS*SGYAETHANVHTRT
Trigger: GGTGCGTGTGTGTACATTAGCATGTGTTTCAGCGTATCCAGACCAGCTTCCGCCAGGAGCTAGGACCACCTTGGGCAGGTACATGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp AAGAAACCCTCCTTCCTCCTGCCGCTGTTGACAGAATGTCACCTGTaGGCTACGTATGCCCATGACAAAGAGATCCATGGAGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KKPSFLLPLLTECHL*ATYAHDKEIHGGSR
Trigger: CCGGGAGCCTCCATGGATCTCTTTGTCATGGGCATACGTAGCCCACAGGTGACATTCTGTCAACAGCGGCAGGAGGAAGGAGGGTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp GGGGCCAGTGAGGGCTGGTGGCTCTGTCTTGGGAGGAAATGTCACTaGCCTTCGAGAATGACAATTGAGGTCATTAGGATGGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: GASEGWWLCLGRKCH*PSRMTIEVIRMALW
Trigger: CCACAGTGCCATCCTAATGACCTCAATTGTCATTCTCGAAGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCTCACTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCATTCCTTTGGTTCAACTaGTTCTGTCACTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPGDPSVHGSSWAMERASFLWFN*FCHFSF
Trigger: GAAGCTGAAGTGACAGAACAAGTTGAACCAAAGGAA...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp CTGCCAGGGGACCCCAGTGTTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAAGGTCTGGAATTCCTTaGGTTCAACTTGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LPGDPSVHGSSWAMERASRSGIP*VQLVLS
Trigger: TGACAGAACAAGTTGAACCAAAGGAATTCCAGACCT...TGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAACACTGGGGTCCCCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp TGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCCACCCCCGTGCTGACGTaGCGCTCATCCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: CIHCSGLRTAFAMGKFTSTPVLT*RSSSSM
Trigger: CATCGATGAGGATGAGCGCAACGTCAGCACGGGGGT...GGATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp AATCTGGACAGAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGACTGGGGATAATTTGTaGGCCTGGGTCTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: NLDRETRMGHEDSARGPQTGDNL*AWVSIA
Trigger: AGCTATGGAGACCCAGGCCAACAAATTATCCCCAGT...CTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTCTGTCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp GAATCAGATAAGCCATCGGCTTTTTCCTGCTTACCTGGCACAAGCTaGCTTTGCAAGAGTGGGGCCAAGCTGGGACAGCCAATGCCCGCA +
Preference number: 5 (lower is better)
Translates to: ESDKPSAFSCLPGTS*LCKSGAKLGQPMPA
Trigger: TGCGGGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGCCAGGTAAGCAGGAAAAAGCCGATGGCTTATCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp TACTCCCTCCCACCACGATTGAGCTGTAGGTCAGCTCTGTGCTGGTaGCTTACAACATCATCTCAGTCCTCACCGTGGCCTAATCTGGTC +
Preference number: 5 (lower is better)
Translates to: YSLPPRLSCRSALCW*LTTSSQSSPWPNLV
Trigger: GACCAGATTAGGCCACGGTGAGGACTGAGATGATGTTGTAAGGCACCAGCACAGAGCTGACCTACAGCTCAATCGTGGTGGGAGGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS GCA 90 bp CACATGCTAATGTACACACACGCACCTCCCAGCCTGCTTCTGCCTTaGCGGGAATCAGATAAGCCATCGGCTTTTTCCTGCTTACCTGGC +
Preference number: 5 (lower is better)
Translates to: HMLMYTHAPPSLLLP*RESDKPSAFSCLPG
Trigger: GCCAGGTAAGCAGGAAAAAGCCGATGGCTTATCTGATTCCCGGCAAGGCAGAAGCAGGCTGGGAGGTGCGTGTGTGTACATTAGCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 90 bp GTTCTCCCCAGTCTGTGGCTTTGGAGTCAAGAAGCTTCGGTGCCATaGTCCAGTCAGGGTTATCCAGCACATTTGGGGTGCCATAAGTCC +
Preference number: 5 (lower is better)
Translates to: VLPSLWLWSQEASVP*SSQGYPAHLGCHKS
Trigger: GGACTTATGGCACCCCAAATGTGCTGGATAACCCTGACTGGAGCATGGCACCGAAGCTTCTTGACTCCAAAGCCACAGACTGGGGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp AATCGTGTGACGTGCGCAAAAGTCACGCAGCACATAGTCACGGGCTaGGCAGACCAGGGAAAAACAGAAGGAATGGGTAACGACGGTGGA +
Preference number: 5 (lower is better)
Translates to: NRVTCAKVTQHIVTG*ADQGKTEGMGNDGG
Trigger: TCCACCGTCGTTACCCATTCCTTCTGTTTTTCCCTGGTCTGCCCAGCCCGTGACTATGTGCTGCGTGACTTTTGCGCACGTCACACGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp GCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCGGGCTTGGAATGCCTTCTATTaGCTTCTTTCCAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: APAGLWRGHQTELSGYRAWNAFY*LLSRGC
Trigger: ACATCCTCTGGAAAGAAGCAAATAGAAGGCATTCCA...AGCCCGGTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS GCA 90 bp TCTTGTCCGGCTGTCACTGTCCACGGGCCATACACTTTAAGCTTCTaGCACCACCATGCCCTACTCACTGTTTCTCAAACACACCAAGCC +
Preference number: 5 (lower is better)
Translates to: SCPAVTVHGPYTLSF*HHHALLTVSQTHQA
Trigger: GGCTTGGTGTGTTTGAGAAACAGTGAGTAGGGCATGGTGGTGGCAGAAGCTTAAAGTGTATGGCCCGTGGACAGTGACAGCCGGACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS GCA 90 bp GACGCTCAGATGGTATTCTGCCACATCCACAGCCATGATGTCTGCTaGAGTGACTGTGACTTAAAAACGGACCCGATACTGCGCACCTCC +
Preference number: 5 (lower is better)
Translates to: DAQMVFCHIHSHDVC*SDCDLKTDPILRTS
Trigger: GGAGGTGCGCAGTATCGGGTCCGTTTTTAAGTCACAGTCACTGCAGCAGACATCATGGCTGTGGATGTGGCAGAATACCATCTGAGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS CCA 90 bp ATAATGCCCACCCCAATTTCTGGATTCCCTTGTAGTTCAGAGAGGTaGTTACACATGGTAAGCCTGCAGGCCTGGTGCAGGGTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: IMPTPISGFPCSSER*LHMVSLQAWCRVVG
Trigger: CCCTACCACCCTGCACCAGGCCTGCAGGCTTACCATGTGTAACCACCTCTCTGAACTACAAGGGAATCCAGAAATTGGGGTGGGCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp TTCACGGCTCCAGCTGGGCTATGGAGAGGGCATCAGACAGAGCTGAGTGGGTACCAAAAAGATAAAGCATaGCAAGGCACCTCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: FTAPAGLWRGHQTELSGYQKDKA*QGTSRQ
Trigger: CTGCCTTGAGGTGCCTTGCAATGCTTTATCTTTTTG...GTACCCACTCAGCTCTGTCTGATGCCCTCTCCATAGCCCAGCTGGAGCCGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS-3UTR CAA 90 bp TTGTATCCACTGCAGTGGGCTGAGAACTGCATTTGCGATGGGGAAGTTCACATCTTGGACCTCTGGTTCTaGCCATGGTTGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LYPLQWAENCICDGEVHILDLWF*PWLRSG
Trigger: CCCGGACCTCAACCATGGCAAGAACCAGAGGTCCAA...GATGTGAACTTCCCCATCGCAAATGCAGTTCTCAGCCCACTGCAGTGGATACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp GAGAGACCAGGATGGGTCATGAGGACTCTGCCAGGGGACCCCAGTGTTCACGGCTGCCCCAACTTTATTTaGGTTCTAGAATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: ERPGWVMRTLPGDPSVHGCPNFI*VLESFQ
Trigger: CTGGAATGATTCTAGAACCAAAATAAAGTTGGGGCA...GCCGTGAACACTGGGGTCCCCTGGCAGAGTCCTCATGACCCATCCTGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp TCACCCAGCACCTCTGGGCTTCATACTCCGTTTGGAAAATGCGGATaGCAAGAACATCCCCCATCCAGCGGTCCCACTCTGGTGAATTTA +
Preference number: 5 (lower is better)
Translates to: SPSTSGLHTPFGKCG*QEHPPSSGPTLVNL
Trigger: TAAATTCACCAGAGTGGGACCGCTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 90 bp GGGCTGTGGGATCCAGGGGGATGGAGAACTTCTCATCAAAGAAGATaGAGTAGGCATTTCTCTGGATCCGAGAAATGCCCACGATCTGCT +
Preference number: 5 (lower is better)
Translates to: GLWDPGGWRTSHQRR*SRHFSGSEKCPRSA
Trigger: AGCAGATCGTGGGCATTTCTCGGATCCAGAGAAATGCCTACTCCATCTTCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCACAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp CGATGCCAAATACAGAAAACCGCAGGCTCTTCTCCTCCAGGGCTGTaGGATCCAGGGGGATGGAGAACTTCTCATCAAAGAAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: RCQIQKTAGSSPPGL*DPGGWRTSHQRRWS
Trigger: ACTCCATCTTCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCACAGCCCTGGAGGAGAAGAGCCTGCGGTTTTCTGTATTTGGCATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 90 bp AATTACTCCCTCCCACCACGATTGAGCTGTAGGTCAGCTCTGTGCTaGTGCCTTACAACATCATCTCAGTCCTCACCGTGGCCTAATCTG +
Preference number: 5 (lower is better)
Translates to: NYSLPPRLSCRSALC*CLTTSSQSSPWPNL
Trigger: CAGATTAGGCCACGGTGAGGACTGAGATGATGTTGTAAGGCACCAGCACAGAGCTGACCTACAGCTCAATCGTGGTGGGAGGGAGTAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS-3UTR CAA 90 bp TTCTTTTCCTGCCCCTCCAAGCACAGCTCCTACCTTGTCAAAGAGGCCCTTCCTGTCCGGGGAGTAGATTaGACAGAGAATAACTCCGGA +
Preference number: 5 (lower is better)
Translates to: FFSCPSKHSSYLVKEALPVRGVD*TENNSG
Trigger: TCCGGAGTTATTCTCTGTCAAATCTACTCCCCGGAC...AGGAAGGGCCTCTTTGACAAGGTAGGAGCTGTGCTTGGAGGGGCAGGAAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS CCA 90 bp AAGGCAGCAGCGCTGCCAAATGTCCATAAAGGACAGGATCAGGGTTaGAGAGACCATTATGAGCCCAAGTGCCCTTCAGCTTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KAAALPNVHKGQDQG*RDHYEPKCPSASFF
Trigger: GAAAAAGGAAGCTGAAGGGCACTTGGGCTCATAATGGTCTCTCCAACCCTGATCCTGTCCTTTATGGACATTTGGCAGCGCTGCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 90 bp CCAGGAAGGGCTTCACCCATCCTGACTAGAGTGGAAGCTCATTCCTaGGCCTGGGCTGGAGATAATGATAGTAATAGAGAACCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: PGRASPILTRVEAHS*AWAGDNDSNREPCR
Trigger: TCGACAAGGTTCTCTATTACTATCATTATCTCCAGCCCAGGCCCAGGAATGAGCTTCCACTCTAGTCAGGATGGGTGAAGCCCTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS-3UTR CAA 90 bp AAGAAACTACTTGCCCCAGAATCCCCCTCTCAGATTTCGCTTCTAGGGAACTCAGGCATCAACAAATGCTaGCAGGGTCTGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: KKLLAPESPSQISLLGNSGINKC*QGLGLV
Trigger: AACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCC...TGAGTTCCCTAGAAGCGAAATCTGAGAGGGGGATTCTGGGGCAAGTAGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp TTCTCTGAGAACACTCACCCGCAAGAAACTACTTGCCCCAGAATCCCCCTCTCAATCACTGGGGATAATTaGTTGGCCTGGGTCTCCATA +
Preference number: 5 (lower is better)
Translates to: FSENTHPQETTCPRIPLSITGDN*LAWVSI
Trigger: TATGGAGACCCAGGCCAACAAATTATCCCCAGTGAT...TGAGAGGGGGATTCTGGGGCAAGTAGTTTCTTGCGGGTGAGTGTTCTCAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS-3UTR CAA 90 bp CTGCAAGGGCATCAACAAATGCTTGCAGGGTCTGGGCCTGGTTTGCGCAGGACTTGCCCCAACTTTATTTaGGTTCTAGAATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: LQGHQQMLAGSGPGLRRTCPNFI*VLESFQ
Trigger: CTGGAATGATTCTAGAACCAAAATAAAGTTGGGGCA...AGTCCTGCGCAAACCAGGCCCAGACCCTGCAAGCATTTGTTGATGCCCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393946.6
ENST00000527043.6
CDS TCA 90 bp AGTTTCCCCTTTTCTGAATGGATAATTACTCCCTCCCACCACGATTaGGCTGTAGGTCAGCTCTGTGCTGGTGCCTTACAACATCATCTC +
Preference number: 5 (lower is better)
Translates to: SFPFSEWIITPSHHD*AVGQLCAGALQHHL
Trigger: GAGATGATGTTGTAAGGCACCAGCACAGAGCTGACCTACAGCTCAATCGTGGTGGGAGGGAGTAATTATCCATTCAGAAAAGGGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS CCA 90 bp TTAAACGGCTCTGACCCCAAAATTCTTTCTCCACTTTCCCAGGTCTaGAATTCCTTTGGTTCAACTTGTTCTGTCACTTCAGCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LNGSDPKILSPLSQV*NSFGSTCSVTSASC
Trigger: ACAAGAAGCTGAAGTGACAGAACAAGTTGAACCAAAGGAATTCCAGACCTGGGAAAGTGGAGAAAGAATTTTGGGGTCAGAGCCGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS TCA 90 bp TTCATTTCCTGGACTGTGAAATATGATGTTTGTTTGTGTGTTATGTaGCATATTTGTGTGGCGTGCTGTGGGTTGAGGCCTTTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FISWTVKYDVCLCVM*HICVACCGLRPLGE
Trigger: TTCTCCTAAAGGCCTCAACCCACAGCACGCCACACAAATATGTCACATAACACACAAACAAACATCATATTTCACAGTCCAGGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS GCA 90 bp TGCTTTTACTCGATGCAGTTCCTTTTGCCTGGAATGCCTTCTATTTaGTTCTTTCCAGAGGATGTAAACTCTTCATCCTTTCAAACTCTC +
Preference number: 5 (lower is better)
Translates to: CFYSMQFLLPGMPSI*FFPEDVNSSSFQTL
Trigger: GAGAGTTTGAAAGGATGAAGAGTTTACATCCTCTGGAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCGAGTAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp AGAGGGAGGCCCCTGGGTAAGGCTGGGGACAGGCCATaGTGCAGTCCCTGGGAAGGCCCTTCGCCCACGAGC +
Preference number: 6 (lower is better)
Translates to: RGRPLGKAGDRP*CSPWEGPSPTS
Trigger: GCTCGTGGGCGAAGGGCCTTCCCAGGGACTGCACCATGGCCTGTCCCCAGCCTTACCCAGGGGCCTCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CAA 90 bp GGTACCGGGCTCCAGCAGCTCCATTGCCCAACTGGCCCGCCCTGGTaGCTAGTTTCGCCGGACAGCGTGCCACATGGACACGGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: GTGLQQLHCPTGPPW*LVSPDSVPHGHGPA
Trigger: CGCAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp GGTGTCCTCAATGCTGAGACTGCCTTTGCGGCTGGGTaGTCCCCGCGTGCTGGCCCGCTGGGCATTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GVLNAETAFAAG*SPRAGPLGIPG
Trigger: GCCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393946.6
ENST00000525149.1
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CCA 72 bp CCTTTGCGGCTGGGTGGTCCCCGCGTGCTGGCCCGCTaGGCATTCCAGGCAGGCACTCTCGCTCAGATGGTA +
Preference number: 6 (lower is better)
Translates to: PLRLGGPRVLAR*AFQAGTLAQMV
Trigger: TACCATCTGAGCGAGAGTGCCTGCCTGGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526281.1
CDS CAA 90 bp GTTCCCATGCCACTGGCTGACGGCCCAATGATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACCGTCACGCGG +
Preference number: 6 (lower is better)
Translates to: VPMPLADGPMMTWPT*SPRPSLLLSATVTR
Trigger: CCGCGTGACGGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 72 bp AAGCTGGCCTCCTCCCGCTCCAGGAGGTCCTTGCCCTaGATCACCGCCACGTTCAGCGTGTGGGAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: KLASSRSRRSLP*ITATFSVWEAV
Trigger: CACTGCCTCCCACACGCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCGGGAGGAGGCCAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CCA 72 bp CTCCCGGGCCCCGCCCTGCTAAGGCTTGGTGTATTCTaGGAGTCCTGGGAACAGGGTCACAGCAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LPGPALLRLGVF*ESWEQGHSRAG
Trigger: CCCAGCCCTGCTGTGACCCTGTTCCCAGGACTCCCAGAATACACCAAGCCTTAGCAGGGCGGGGCCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp CCACTGGCTGACGGCCCAATGATGACATGGCCCACGTaGTCCCCACGGCCGTCGCTGCTGCTCTCAGCCACC +
Preference number: 6 (lower is better)
Translates to: PLADGPMMTWPT*SPRPSLLLSAT
Trigger: GGTGGCTGAGAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp GTTCCCATGCCACTGGCTGACGGCCCAATGATGACATaGCCCACGTTGTCCCCACGGCCGTCGCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: VPMPLADGPMMT*PTLSPRPSLLL
Trigger: GAGCAGCAGCGACGGCCGTGGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp AGTGGGTACCGGGCTCCAGCAGCTCCATTGCCCAACTaGCCCGCCCTGGTTGCTAGTTTCGCCGGACAGCGT +
Preference number: 6 (lower is better)
Translates to: SGYRAPAAPLPN*PALVASFAGQR
Trigger: ACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp AAAGCAGGTTCAGGCTCCCCTGTGCCTGAGGCTCTTTaGGAGCTGAAGGGTGGAGCCCATGCCCGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: KAGSGSPVPEAL*ELKGGAHARGG
Trigger: GCCACCCCGGGCATGGGCTCCACCCTTCAGCTCCCAAAGAGCCTCAGGCACAGGGGAGCCTGAACCTGCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 90 bp ATGAAGCAGGACTCGAAGCTGGCCTCCTCCCGCTCCAGGAGGTCCTaGCCCTGCATCACCGCCACGTTCAGCGTGTGGGAGGCAGTGTCG +
Preference number: 6 (lower is better)
Translates to: MKQDSKLASSRSRRS*PCITATFSVWEAVS
Trigger: CGACACTGCCTCCCACACGCTGAACGTGGCGGTGATGCAGGGCAAGGACCTCCTGGAGCGGGAGGAGGCCAGCTTCGAGTCCTGCTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CAA 90 bp GGGCATCAGACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTGGTTGCTAGTTTCGCCGGACAGCGT +
Preference number: 6 (lower is better)
Translates to: GHQTELSGYRAPAAP*PNWPALVASFAGQR
Trigger: ACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGTCTGATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 72 bp AGCACAACAGGCGTGGTACGGGACAAAGCCTCAAGCTaGATCTGGCCTCTGGCTGTCGGGGGCCCCATCACC +
Preference number: 6 (lower is better)
Translates to: STTGVVRDKASS*IWPLAVGGPIT
Trigger: GGTGATGGGGCCCCCGACAGCCAGAGGCCAGATGCAGCTTGAGGCTTTGTCCCGTACCACGCCTGTTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS CCA 72 bp CAGCCCCTCTGGGCCAGGAGATCTGGAGCCCTGCTGTaGTTCCTTCGGCCTCCTACTCACTGGGTAGCCTAC +
Preference number: 6 (lower is better)
Translates to: QPLWARRSGALL*FLRPPTHWVAY
Trigger: GTAGGCTACCCAGTGAGTAGGAGGCCGAAGGAACCACAGCAGGGCTCCAGATCTCCTGGCCCAGAGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp TCCATGGAGGCTCCCGGGCCCCGCCCTGCTAAGGCTTaGTGTATTCTGGGAGTCCTGGGAACAGGGTCACAG +
Preference number: 6 (lower is better)
Translates to: SMEAPGPRPAKA*CILGVLGTGSQ
Trigger: CTGTGACCCTGTTCCCAGGACTCCCAGAATACACCAAGCCTTAGCAGGGCGGGGCCCGGGAGCCTCCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp CCTGAAGGTCCCACCGAGGGGGCCAGTGAGGGCTGGTaGCTCTGTCTTGGGAGGAAATGTCACTGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PEGPTEGASEGW*LCLGRKCHWPS
Trigger: CGAAGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCTCACTGGCCCCCTCGGTGGGACCTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp CAGCCTGAAGGTCCCACCGAGGGGGCCAGTGAGGGCTaGTGGCTCTGTCTTGGGAGGAAATGTCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: QPEGPTEGASEG*WLCLGRKCHWP
Trigger: AGGCCAGTGACATTTCCTCCCAAGACAGAGCCACCAGCCCTCACTGGCCCCCTCGGTGGGACCTTCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp ATGCTCTCAAAGGTGTCCTCAATGCTGAGACTGCCTTaGCGGCTGGGTGGTCCCCGCGTGCTGGCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: MLSKVSSMLRLP*RLGGPRVLARW
Trigger: CCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCTTTGAGAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393946.6
ENST00000525149.1
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CAA 72 bp CTCCAGCAGCTCCATTGCCCAACTGGCCCGCCCTGGTaGCTAGTTTCGCCGGACAGCGTGCCACATGGACAC +
Preference number: 6 (lower is better)
Translates to: LQQLHCPTGPPW*LVSPDSVPHGH
Trigger: GTGTCCATGTGGCACGCTGTCCGGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 72 bp ACAGAGCTGAGTGGGTACCGGGCTCCAGCAGCTCCATaGCCCAACTGGCCCGCCCTGGTTGCTAGTTTCGCC +
Preference number: 6 (lower is better)
Translates to: TELSGYRAPAAP*PNWPALVASFA
Trigger: GGCGAAACTAGCAACCAGGGCGGGCCAGTTGGGCAATGGAGCTGCTGGAGCCCGGTACCCACTCAGCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 72 bp GCCCGCTTGCCCGCCCGCTCCCTCTTGAATTTAAAGTaGCAAGCTCGAGCGCTGTCTCTGCTCCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: ARLPARSLLNLK*QARALSLLLGS
Trigger: GGACCCCAGGAGCAGAGACAGCGCTCGAGCTTGTCACTTTAAATTCAAGAGGGAGCGGGCGGGCAAGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527043.6
CDS GCA 72 bp AGTTTCGCCGGACAGCGTGCCACATGGACACGGGCCTaGGCAGCGTGGCCAACATCTGGTTCCAATGTGTGG +
Preference number: 6 (lower is better)
Translates to: SFAGQRATWTRA*AAWPTSGSNVW
Trigger: CCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCCGGCGAAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 72 bp GGACTCCAGGACAGGGGAACAGCGTGTGCAAAGCGCTaGCACTGGAAGAGTGGCGTTTGCACCATGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GLQDRGTACAKR*HWKSGVCTMLG
Trigger: GCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTGTCCTGGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp GGACAGCGTGCCACATGGACACGGGCCTGCGCAGCGTaGCCAACATCTGGTTCCAATGTGTGGTTCCCATGC +
Preference number: 6 (lower is better)
Translates to: GQRATWTRACAA*PTSGSNVWFPC
Trigger: GCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTGGCACGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp CAGGACAGGGGAACAGCGTGTGCAAAGCGCTGCCACTaGAAGAGTGGCGTTTGCACCATGCTGGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: QDRGTACAKRCH*KSGVCTMLGAA
Trigger: TGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp CCCTGCCTCTCCATCACCCCAGGTCTTGGCCTCAACTaGCCTCCCAGGTGTTCAGGCGCCCTTAACCCCATC +
Preference number: 6 (lower is better)
Translates to: PCLSITPGLGLN*PPRCSGALNPI
Trigger: GATGGGGTTAAGGGCGCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CAA 90 bp GGTAGCCTACCCTGCCTCTCCATCACCCCAGGTCTTGGCCTCAACTaGCCTCCCAGGTGTTCAGGCGCCCTTAACCCCATCAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GSLPCLSITPGLGLN*PPRCSGALNPIRKS
Trigger: GGACTTCCTGATGGGGTTAAGGGCGCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGGGTAGGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CAA 90 bp AGTTCACTGATGCTCTCAAAGGTGTCCTCAATGCTGAGACTGCCTTaGCGGCTGGGTGGTCCCCGCGTGCTGGCCCGCTGGGCATTCCAG +
Preference number: 6 (lower is better)
Translates to: SSLMLSKVSSMLRLP*RLGGPRVLARWAFQ
Trigger: CTGGAATGCCCAGCGGGCCAGCACGCGGGGACCACCCAGCCGCAAAGGCAGTCTCAGCATTGAGGACACCTTTGAGAGCATCAGTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393946.6
ENST00000525149.1
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS CAA 90 bp ATGCTCACCTCCACCTGGCCCAGTGTGAAGTCCTGCCCAAAGGTGTaGCTCACGGAGGAGATGGAGTTCAGGGAGTCGGCCGACTGGGAC +
Preference number: 6 (lower is better)
Translates to: MLTSTWPSVKSCPKV*LTEEMEFRESADWD
Trigger: GTCCCAGTCGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCAACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS TCA 72 bp CTGAGCACAGGGTTTGTAGTCAGCTGCACCCAGCTCTaGCTCCCATACCTGCCCCTGGCTAGCTGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LSTGFVVSCTQL*LPYLPLASCSG
Trigger: GCCACTGCAGCTAGCCAGGGGCAGGTATGGGAGTCAGAGCTGGGTGCAGCTGACTACAAACCCTGTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp CCTGCCTCTCCATCACCCCAGGTCTTGGCCTCAACTTaGCTCCCAGGTGTTCAGGCGCCCTTAACCCCATCA +
Preference number: 6 (lower is better)
Translates to: PASPSPQVLAST*LPGVQAPLTPS
Trigger: TGATGGGGTTAAGGGCGCCTGAACACCTGGGAGGCAAGTTGAGGCCAAGACCTGGGGTGATGGAGAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS GCA 72 bp AGGCAGGGAAGGACTCCAGGACAGGGGAACAGCGTGTaGAAAGCGCTGCCACTGGAAGAGTGGCGTTTGCAC +
Preference number: 6 (lower is better)
Translates to: RQGRTPGQGNSV*KALPLEEWRLH
Trigger: GTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTGTCCTGGAGTCCTTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp CTCAGTCTCAGGCTCCCCTTAGGGATGAGTGTCTTCTaGGCTTCCCGTACCAGCCCCTCTGGGCCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: LSLRLPLGMSVF*ASRTSPSGPGD
Trigger: ATCTCCTGGCCCAGAGGGGCTGGTACGGGAAGCCCAGAAGACACTCATCCCTAAGGGGAGCCTGAGACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp CACATGGACACGGGCCTGCGCAGCGTGGCCAACATCTaGTTCCAATGTGTGGTTCCCATGCCACTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: HMDTGLRSVANI*FQCVVPMPLAD
Trigger: GTCAGCCAGTGGCATGGGAACCACACATTGGAACCAGATGTTGGCCACGCTGCGCAGGCCCGTGTCCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp GCTCCCATCTCCCTGCTGAGGCAAAGGGTGACAAGGTaGGAGCCATGGCCCTGGACTGGGTGGCCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: APISLLRQRVTR*EPWPWTGWPLF
Trigger: AAAAAGAGGCCACCCAGTCCAGGGCCATGGCTCCCACCTTGTCACCCTTTGCCTCAGCAGGGAGATGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp GGGAACAGCGTGTGCAAAGCGCTGCCACTGGAAGAGTaGCGTTTGCACCATGCTGGGCGCTGCACAACCATC +
Preference number: 6 (lower is better)
Translates to: GNSVCKALPLEE*RLHHAGRCTTI
Trigger: GATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp AGGGTGGTGCTAAGCCAGGAAGGGCTTCACCCATCCTaGCTAGAGTGGAAGCTCATTCCTGGGCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RVVLSQEGLHPS*LEWKLIPGPGL
Trigger: CAGCCCAGGCCCAGGAATGAGCTTCCACTCTAGTCAGGATGGGTGAAGCCCTTCCTGGCTTAGCACCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp TGGGACAGCCAATGCCCGCAGCACGCGAGCAAGGTATaGATGGCAAAGTACACCCCACAGCACAACAGGCGT +
Preference number: 6 (lower is better)
Translates to: WDSQCPQHASKV*MAKYTPQHNRR
Trigger: ACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS GCA 72 bp GACTTTGCAAGAGTGGGGCCAAGCTGGGACAGCCAATaGCCGCAGCACGCGAGCAAGGTATGCATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: DFARVGPSWDSQ*PQHASKVCMAK
Trigger: CTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS GCA 72 bp CAGAGTGATGGCCTGGCCCAAGGGCAGCTGCATTTTTaGCCCAGCAGGAATGCCAACCACCGTGGCTTGATC +
Preference number: 6 (lower is better)
Translates to: QSDGLAQGQLHF*PSRNANHRGLI
Trigger: GATCAAGCCACGGTGGTTGGCATTCCTGCTGGGGCAAAAATGCAGCTGCCCTTGGGCCAGGCCATCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp CGTCACGCGGAGAGACAGGTCCTGGAGCACAATGGCTaGCACCGAGAAGATCATGGCTTCGTTGAACACCGG +
Preference number: 6 (lower is better)
Translates to: RHAERQVLEHNG*HREDHGFVEHR
Trigger: CCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACCTGTCTCTCCGCGTGACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp GGCTACTTGACAGTCTCCACAGAAGGCCTCGGTGAGTaGATTCCGAGTCACAGGCTCATCCCCAGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GYLTVSTEGLGE*IPSHRLIPRVQ
Trigger: CTGCACCCTGGGGATGAGCCTGTGACTCGGAATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525149.1
ENST00000531392.1
CDS CCA 72 bp CTGAGGGACGGAGGAGAGATCTGCCTCCAGACAGACTaGGTCCAGATCTGCACCTATAACCCCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: LRDGGEICLQTD*VQICTYNPTTR
Trigger: CCTGGTGGTGGGGTTATAGGTGCAGATCTGGACCCAGTCTGTCTGGAGGCAGATCTCTCCTCCGTCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp TCCGCTGTGGTCTTGTCGTTGGTCCAGATGAGGTTCTaGGCCTTAACCACGACCACGGTGAGGCGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: SAVVLSLVQMRF*ALTTTTVRRSA
Trigger: AGCCGAGCGCCTCACCGTGGTCGTGGTTAAGGCCAAGAACCTCATCTGGACCAACGACAAGACCACAGCGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 72 bp AGCGTGTGCAAAGCGCTGCCACTGGAAGAGTGGCGTTaGCACCATGCTGGGCGCTGCACAACCATCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SVCKALPLEEWR*HHAGRCTTISS
Trigger: AGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp TGTCGTACTCCATGCTCACCTCCACCTGGCCCAGTGTaGAGTCCTGCCCAAAGGTGTTGCTCACGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: CRTPCSPPPGPV*SPAQRCCSRRR
Trigger: TCTCCTCCGTGAGCAACACCTTTGGGCAGGACTTCACACTGGGCCAGGTGGAGGTGAGCATGGAGTACGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000526281.1
ENST00000527043.6
CDS TCA 72 bp GCACAATGGCTGGCACCGAGAAGATCATGGCTTCGTTaGACACCGGGTTGGGGTCATCCCTCTTCACGGCTG +
Preference number: 6 (lower is better)
Translates to: AQWLAPRRSWLR*TPGWGHPSSRL
Trigger: CAGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 72 bp CATCTGGTTCCAATGTGTGGTTCCCATGCCACTGGCTaGCGGCCCAATGATGACATGGCCCACGTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: HLVPMCGSHATG*RPNDDMAHVVP
Trigger: GGGGACAACGTGGGCCATGTCATCATTGGGCCGTCAGCCAGTGGCATGGGAACCACACATTGGAACCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 72 bp CCTTGGCTACTTGACAGTCTCCACAGAAGGCCTCGGTaGGTGGATTCCGAGTCACAGGCTCATCCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PWLLDSLHRRPR*VDSESQAHPQG
Trigger: ACCCTGGGGATGAGCCTGTGACTCGGAATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525149.1
ENST00000531392.1
CDS TCA 72 bp GCCCCCACTCCCACAAGGAGATGTGCGTTGTCATGGTaGTGGAAGGGTGGTGCTAAGCCAGGAAGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: APTPTRRCALSW*WKGGAKPGRAS
Trigger: TGAAGCCCTTCCTGGCTTAGCACCACCCTTCCATCACCATGACAACGCACATCTCCTTGTGGGAGTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp AATGAGCACATCTGTTTCTCCACTCAAGGCCAGCGGTaGGAAACGGCAGAGCCGGGCACCGGTACCTTGGCT +
Preference number: 6 (lower is better)
Translates to: NEHICFSTQGQR*ETAEPGTGTLA
Trigger: AGCCAAGGTACCGGTGCCCGGCTCTGCCGTTTCTCACCGCTGGCCTTGAGTGGAGAAACAGATGTGCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp GGTGCCCAGGAGCCTCTAGAAGCAGGTCAGATAAGGTaGACAGCCAGCTCCTGGCTTCCAGTTCTCCTGATG +
Preference number: 6 (lower is better)
Translates to: GAQEPLEAGQIR*TASSWLPVLLM
Trigger: CATCAGGAGAACTGGAAGCCAGGAGCTGGCTGTGCACCTTATCTGACCTGCTTCTAGAGGCTCCTGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp AAGAACTGCAGAGTGATGGCCTGGCCCAAGGGCAGCTaGATTTTTGCCCCAGCAGGAATGCCAACCACCGTG +
Preference number: 6 (lower is better)
Translates to: KNCRVMAWPKGS*IFAPAGMPTTV
Trigger: CACGGTGGTTGGCATTCCTGCTGGGGCAAAAATGCAGCTGCCCTTGGGCCAGGCCATCACTCTGCAGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp GGAGAGATCTGCCTCCAGACAGACTGGGTCCAGATCTaGACCTATAACCCCACCACCAGGTGCCAGGACTCA +
Preference number: 6 (lower is better)
Translates to: GEICLQTDWVQI*TYNPTTRCQDS
Trigger: TGAGTCCTGGCACCTGGTGGTGGGGTTATAGGTGCAGATCTGGACCCAGTCTGTCTGGAGGCAGATCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp ACAGCCAATGCCCGCAGCACGCGAGCAAGGTATGCATaGCAAAGTACACCCCACAGCACAACAGGCGTGGTA +
Preference number: 6 (lower is better)
Translates to: TANARSTRARYA*QSTPHSTTGVV
Trigger: TACCACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCATACCTTGCTCGCGTGCTGCGGGCATTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS CAA 72 bp GTCTGCTGCAGTGACTGTGACTGGCACAAGCTGACTTaGCAAGAGTGGGGCCAAGCTGGGACAGCCAATGCC +
Preference number: 6 (lower is better)
Translates to: VCCSDCDWHKLT*QEWGQAGTANA
Trigger: GGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGCCAGTCACAGTCACTGCAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533427.1
CDS CAA 90 bp CAGGGGAACAGCGTGTGCAAAGCGCTGCCACTGGAAGAGTGGCGTTaGCACCATGCTGGGCGCTGCACAACCATCAGCTCTCTAAATCTT +
Preference number: 6 (lower is better)
Translates to: QGNSVCKALPLEEWR*HHAGRCTTISSLNL
Trigger: AAGATTTAGAGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGGCAGCGCTTTGCACACGCTGTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 90 bp GGCTTCCAGGCAAGTCACCCAGCACCTCTGGGCTTCATACTCCGTTaGGAAAATGCGGATGACAAGAACATCCCCCATCCAGCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GFQASHPAPLGFILR*ENADDKNIPHPAVP
Trigger: TGGGACCGCTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTGCCTGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp CGGCCTTGTTCTGGTCCTGTAAATAGAGCCAGCCACTaGAGGGCTGCAGCGGGAGGTCAAGCACAGAAAGCT +
Preference number: 6 (lower is better)
Translates to: RPCSGPVNRASH*RAAAGGQAQKA
Trigger: AGCTTTCTGTGCTTGACCTCCCGCTGCAGCCCTTCAGTGGCTGGCTCTATTTACAGGACCAGAACAAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS GCA 72 bp ATGTGGGAGTCCTGGAAAAAGGAATTTGGGATGGGCTaGACTGATCTCAGGTCAAGGGCACCGAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: MWESWKKEFGMG*TDLRSRAPRAR
Trigger: CCTGGCCCTCGGTGCCCTTGACCTGAGATCAGTGCAGCCCATCCCAAATTCCTTTTTCCAGGACTCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp ATGCATGGCAAAGTACACCCCACAGCACAACAGGCGTaGTACGGGACAAAGCCTCAAGCTGCATCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: MHGKVHPTAQQA*YGTKPQAASGL
Trigger: GAGGCCAGATGCAGCTTGAGGCTTTGTCCCGTACCACGCCTGTTGTGCTGTGGGGTGTACTTTGCCATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531392.1
ENST00000533427.1
CDS CAA 72 bp AGCACAATGGCTGGCACCGAGAAGATCATGGCTTCGTaGAACACCGGGTTGGGGTCATCCCTCTTCACGGCT +
Preference number: 6 (lower is better)
Translates to: STMAGTEKIMAS*NTGLGSSLFTA
Trigger: AGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 90 bp AGGTCAAGCACAGAAAGCTTCAGCTCCACCACCCCCGTGCTGACGTaGCGCTCATCCTCATCGATGCCAAATACAGAAAACCGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: RSSTESFSSTTPVLT*RSSSSMPNTENRRL
Trigger: GAGCCTGCGGTTTTCTGTATTTGGCATCGATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGGAGCTGAAGCTTTCTGTGCTTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 90 bp AGGTCCTGGAGCACAATGGCTGGCACCGAGAAGATCATGGCTTCGTaGAACACCGGGTTGGGGTCATCCCTCTTCACGGCTGTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: RSWSTMAGTEKIMAS*NTGLGSSLFTAVFF
Trigger: AAAGAAGACAGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 90 bp GACGGTGGAAGGGCTGTGAAGAAACCCTCCTTCCTCCTGCCGCTGTaGACAGAATGTCACCTGTGGGCTACGTATGCCCATGACAAAGAG +
Preference number: 6 (lower is better)
Translates to: DGGRAVKKPSFLLPL*TECHLWATYAHDKE
Trigger: CTCTTTGTCATGGGCATACGTAGCCCACAGGTGACATTCTGTCAACAGCGGCAGGAGGAAGGAGGGTTTCTTCACAGCCCTTCCACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp CAAGCACAGAAAGCTTCAGCTCCACCACCCCCGTGCTaGCGTTGCGCTCATCCTCATCGATGCCAAATACAG +
Preference number: 6 (lower is better)
Translates to: QAQKASAPPPPC*RCAHPHRCQIQ
Trigger: CTGTATTTGGCATCGATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGGAGCTGAAGCTTTCTGTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 72 bp AAGCCATCGGCTTTTTCCTGCTTACCTGGCACAAGCTaGCTTTGCAAGAGTGGGGCCAAGCTGGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: KPSAFSCLPGTS*LCKSGAKLGQP
Trigger: TGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGCCAGGTAAGCAGGAAAAAGCCGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp TCCCTCCCACCACGATTGAGCTGTAGGTCAGCTCTGTaGTGGTGCCTTACAACATCATCTCAGTCCTCACCG +
Preference number: 6 (lower is better)
Translates to: SLPPRLSCRSAL*WCLTTSSQSSP
Trigger: CGGTGAGGACTGAGATGATGTTGTAAGGCACCAGCACAGAGCTGACCTACAGCTCAATCGTGGTGGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS GCA 72 bp GCATTCCAGGCAGGCACTCTCGCTCAGATGGTATTCTaGCACATCCACAGCCATGATGTCTGCTGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: AFQAGTLAQMVF*HIHSHDVCCSD
Trigger: GTCACTGCAGCAGACATCATGGCTGTGGATGTGGCAGAATACCATCTGAGCGAGAGTGCCTGCCTGGAATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526281.1
CDS GCA 72 bp ATGTACACACACGCACCTCCCAGCCTGCTTCTGCCTTaGCGGGAATCAGATAAGCCATCGGCTTTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: MYTHAPPSLLLP*RESDKPSAFSC
Trigger: GCAGGAAAAAGCCGATGGCTTATCTGATTCCCGGCAAGGCAGAAGCAGGCTGGGAGGTGCGTGTGTGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp CCACTGGAAGAGTGGCGTTTGCACCATGCTGGGCGCTaGACAACCATCAGCTCTCTAAATCTTCCCAACAGC +
Preference number: 6 (lower is better)
Translates to: PLEEWRLHHAGR*TTISSLNLPNS
Trigger: GCTGTTGGGAAGATTTAGAGAGCTGATGGTTGTGCAGCGCCCAGCATGGTGCAAACGCCACTCTTCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp TCAGCTGCACCCAGCTCTGACTCCCATACCTGCCCCTaGCTAGCTGCAGTGGCCTTGGGTAATTTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: SAAPSSDSHTCP*LAAVALGNFLS
Trigger: ACTAAGAAAATTACCCAAGGCCACTGCAGCTAGCCAGGGGCAGGTATGGGAGTCAGAGCTGGGTGCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp TTCAGGAATTCCGGGGTTCTCCCCAGTCTGTGGCTTTaGAGTCAAGAAGCTTCGGTGCCATGCTCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: FRNSGVLPSLWL*SQEASVPCSSQ
Trigger: CTGACTGGAGCATGGCACCGAAGCTTCTTGACTCCAAAGCCACAGACTGGGGAGAACCCCGGAATTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp GGTGTATGTGGGAGTCCTGGAAAAAGGAATTTGGGATaGGCTGCACTGATCTCAGGTCAAGGGCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: GVCGSPGKRNLG*AALISGQGHRG
Trigger: CCCTCGGTGCCCTTGACCTGAGATCAGTGCAGCCCATCCCAAATTCCTTTTTCCAGGACTCCCACATACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp TACACCTTGACGAAGGGGTCCGCTGTGGTCTTGTCGTaGGTCCAGATGAGGTTCTTGGCCTTAACCACGACC +
Preference number: 6 (lower is better)
Translates to: YTLTKGSAVVLS*VQMRFLALTTT
Trigger: GGTCGTGGTTAAGGCCAAGAACCTCATCTGGACCAACGACAAGACCACAGCGGACCCCTTCGTCAAGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 72 bp ATCGGCTTTTTCCTGCTTACCTGGCACAAGCTGACTTaGCAAGAGTGGGGCCAAGCTGGGACAGCCAATGCC +
Preference number: 6 (lower is better)
Translates to: IGFFLLTWHKLT*QEWGQAGTANA
Trigger: GGCATTGGCTGTCCCAGCTTGGCCCCACTCTTGCAAAGTCAGCTTGTGCCAGGTAAGCAGGAAAAAGCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp AGGGCTGTGAAGAAACCCTCCTTCCTCCTGCCGCTGTaGACAGAATGTCACCTGTGGGCTACGTATGCCCAT +
Preference number: 6 (lower is better)
Translates to: RAVKKPSFLLPL*TECHLWATYAH
Trigger: ATGGGCATACGTAGCCCACAGGTGACATTCTGTCAACAGCGGCAGGAGGAAGGAGGGTTTCTTCACAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp ACCTCTGGGCTTCATACTCCGTTTGGAAAATGCGGATaGCAAGAACATCCCCCATCCAGCGGTCCCACTCTG +
Preference number: 6 (lower is better)
Translates to: TSGLHTPFGKCG*QEHPPSSGPTL
Trigger: CAGAGTGGGACCGCTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp AGTCTGTGGCTTTGGAGTCAAGAAGCTTCGGTGCCATaGTCCAGTCAGGGTTATCCAGCACATTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: SLWLWSQEASVP*SSQGYPAHLGC
Trigger: GCACCCCAAATGTGCTGGATAACCCTGACTGGAGCATGGCACCGAAGCTTCTTGACTCCAAAGCCACAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp TCCCCAGTCTGTGGCTTTGGAGTCAAGAAGCTTCGGTaGCATGCTCCAGTCAGGGTTATCCAGCACATTTGG +
Preference number: 6 (lower is better)
Translates to: SPVCGFGVKKLR*HAPVRVIQHIW
Trigger: CCAAATGTGCTGGATAACCCTGACTGGAGCATGGCACCGAAGCTTCTTGACTCCAAAGCCACAGACTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp TACCTGCCCAAGGTGGTCCTAGCTCCTGGCGGAAGCTaGTCTGGATACGCTGAAACACATGCTAATGTACAC +
Preference number: 6 (lower is better)
Translates to: YLPKVVLAPGGS*SGYAETHANVH
Trigger: GTGTACATTAGCATGTGTTTCAGCGTATCCAGACCAGCTTCCGCCAGGAGCTAGGACCACCTTGGGCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp ACGTGCGCAAAAGTCACGCAGCACATAGTCACGGGCTaGGCAGACCAGGGAAAAACAGAAGGAATGGGTAAC +
Preference number: 6 (lower is better)
Translates to: TCAKVTQHIVTG*ADQGKTEGMGN
Trigger: GTTACCCATTCCTTCTGTTTTTCCCTGGTCTGCCCAGCCCGTGACTATGTGCTGCGTGACTTTTGCGCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp GGTACCTTGGCTTCCAGGCAAGTCACCCAGCACCTCTaGGCTTCATACTCCGTTTGGAAAATGCGGATGACA +
Preference number: 6 (lower is better)
Translates to: GTLASRQVTQHL*ASYSVWKMRMT
Trigger: TGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTGCCTGGAAGCCAAGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp GGCACCGAGAAGATCATGGCTTCGTTGAACACCGGGTaGGGGTCATCCCTCTTCACGGCTGTCTTCTTTTTG +
Preference number: 6 (lower is better)
Translates to: GTEKIMASLNTG*GSSLFTAVFFL
Trigger: CAAAAAGAAGACAGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAACGAAGCCATGATCTTCTCGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 72 bp AATTCCCAACCCCTCGGAGCATCCTGTAGGTTCCCTTaGGGACTGGGGTCGAATCAGAGGGTAAAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: NSQPLGASCRFP*GLGSNQRVKLR
Trigger: CCTTAGCTTTACCCTCTGATTCGACCCCAGTCCCAAAGGGAACCTACAGGATGCTCCGAGGGGTTGGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 90 bp TTGAACACCGGGTTGGGGTCATCCCTCTTCACGGCTGTCTTCTTTTaGCTCATCTTCCTCCCATCCTGCAGCAGGTACACCTTGACGAAG +
Preference number: 6 (lower is better)
Translates to: LNTGLGSSLFTAVFF*LIFLPSCSRYTLTK
Trigger: CTTCGTCAAGGTGTACCTGCTGCAGGATGGGAGGAAGATGAGCAAAAAGAAGACAGCCGTGAAGAGGGATGACCCCAACCCGGTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS TCA 72 bp ATCCTTTCCCAGGGAGCTGAGATTTCAGTGAGGGTGTaGATGACTGCTAGGCACACCCCAGACAGAAGTTCC +
Preference number: 6 (lower is better)
Translates to: ILSQGAEISVRV*MTARHTPDRSS
Trigger: GGAACTTCTGTCTGGGGTGTGCCTAGCAGTCATTCACACCCTCACTGAAATCTCAGCTCCCTGGGAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp CCACGGGCCATACACTTTAAGCTTCTGCCACCACCATaGCCTACTCACTGTTTCTCAAACACACCAAGCCCT +
Preference number: 6 (lower is better)
Translates to: PRAIHFKLLPPP*PTHCFSNTPSP
Trigger: AGGGCTTGGTGTGTTTGAGAAACAGTGAGTAGGGCATGGTGGTGGCAGAAGCTTAAAGTGTATGGCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp GCGCTGCCAAATGTCCATAAAGGACAGGATCAGGGTTaGAGAGACCATTATGAGCCCAAGTGCCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: ALPNVHKGQDQG*RDHYEPKCPSA
Trigger: AGCTGAAGGGCACTTGGGCTCATAATGGTCTCTCCAACCCTGATCCTGTCCTTTATGGACATTTGGCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp ATACAGAAAACCGCAGGCTCTTCTCCTCCAGGGCTGTaGGATCCAGGGGGATGGAGAACTTCTCATCAAAGA +
Preference number: 6 (lower is better)
Translates to: IQKTAGSSPPGL*DPGGWRTSHQR
Trigger: TCTTTGATGAGAAGTTCTCCATCCCCCTGGATCCCACAGCCCTGGAGGAGAAGAGCCTGCGGTTTTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CCA 72 bp ACCCCAATTTCTGGATTCCCTTGTAGTTCAGAGAGGTaGTTACACATGGTAAGCCTGCAGGCCTGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: TPISGFPCSSER*LHMVSLQAWCR
Trigger: CCTGCACCAGGCCTGCAGGCTTACCATGTGTAACCACCTCTCTGAACTACAAGGGAATCCAGAAATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp TCCTTCCTCCTGCCGCTGTTGACAGAATGTCACCTGTaGGCTACGTATGCCCATGACAAAGAGATCCATGGA +
Preference number: 6 (lower is better)
Translates to: SFLLPLLTECHL*ATYAHDKEIHG
Trigger: TCCATGGATCTCTTTGTCATGGGCATACGTAGCCCACAGGTGACATTCTGTCAACAGCGGCAGGAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp CAAGTCACCCAGCACCTCTGGGCTTCATACTCCGTTTaGAAAATGCGGATGACAAGAACATCCCCCATCCAG +
Preference number: 6 (lower is better)
Translates to: QVTQHLWASYSV*KMRMTRTSPIQ
Trigger: CTGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp ACAGAAAGCTTCAGCTCCACCACCCCCGTGCTGACGTaGCGCTCATCCTCATCGATGCCAAATACAGAAAAC +
Preference number: 6 (lower is better)
Translates to: TESFSSTTPVLT*RSSSSMPNTEN
Trigger: GTTTTCTGTATTTGGCATCGATGAGGATGAGCGCAACGTCAGCACGGGGGTGGTGGAGCTGAAGCTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393946.6
ENST00000525457.5
ENST00000527043.6
CDS CAA 72 bp GACTCCCATACCTGCCCCTGGCTAGCTGCAGTGGCCTaGGGTAATTTTCTTAGTCTCTTAGAGCCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: DSHTCPWLAAVA*GNFLSLLEPQF
Trigger: GAACTGAGGCTCTAAGAGACTAAGAAAATTACCCAAGGCCACTGCAGCTAGCCAGGGGCAGGTATGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp GCAAGTCACCCAGCACCTCTGGGCTTCATACTCCGTTaGGAAAATGCGGATGACAAGAACATCCCCCATCCA +
Preference number: 6 (lower is better)
Translates to: ASHPAPLGFILR*ENADDKNIPHP
Trigger: TGGATGGGGGATGTTCTTGTCATCCGCATTTTCCAAACGGAGTATGAAGCCCAGAGGTGCTGGGTGACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 90 bp GCTCTTGATGACTTGACCTTCCTGGGCTTATTTTCCCTTGGCTACTaGACAGTCTCCACAGAAGGCCTCGGTGAGTGGATTCCGAGTCAC +
Preference number: 6 (lower is better)
Translates to: ALDDLTFLGLFSLGY*TVSTEGLGEWIPSH
Trigger: GTGACTCGGAATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGGGAAAATAAGCCCAGGAAGGTCAAGTCATCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525149.1
CDS TCA 72 bp GAAGACCCAGGCCCTAGGCAAAGTCTTAAACGGCTCTaGCCCCAAAATTCTTTCTCCACTTTCCCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: EDPGPRQSLKRL*PQNSFSTFPGL
Trigger: CAGACCTGGGAAAGTGGAGAAAGAATTTTGGGGTCAGAGCCGTTTAAGACTTTGCCTAGGGCCTGGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp GCCACACAGCTAATAAACTGTTCAACCCAGGCCAACTaGCTCCATGCTCCTAACCACTGTGTCTCACTGCAA +
Preference number: 6 (lower is better)
Translates to: ATQLINCSTQAN*LHAPNHCVSLQ
Trigger: TTGCAGTGAGACACAGTGGTTAGGAGCATGGAGCCAGTTGGCCTGGGTTGAACAGTTTATTAGCTGTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp GACTTGACCTTCCTGGGCTTATTTTCCCTTGGCTACTaGACAGTCTCCACAGAAGGCCTCGGTGAGTGGATT +
Preference number: 6 (lower is better)
Translates to: DLTFLGLFSLGY*TVSTEGLGEWI
Trigger: AATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGGGAAAATAAGCCCAGGAAGGTCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525149.1
CDS CAA 72 bp ACCTTGACCTTCCTGGGCTTATTTTCCCTTGGCTACTaGACAGTCTCCACAGAAGGCCTCGGTGAGTGGATT +
Preference number: 6 (lower is better)
Translates to: TLTFLGLFSLGY*TVSTEGLGEWI
Trigger: AATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGGGAAAATAAGCCCAGGAAGGTCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 90 bp ATGAATCTAACCTTGACCTTCCTGGGCTTATTTTCCCTTGGCTACTaGACAGTCTCCACAGAAGGCCTCGGTGAGTGGATTCCGAGTCAC +
Preference number: 6 (lower is better)
Translates to: MNLTLTFLGLFSLGY*TVSTEGLGEWIPSH
Trigger: GTGACTCGGAATCCACTCACCGAGGCCTTCTGTGGAGACTGTCAAGTAGCCAAGGGAAAATAAGCCCAGGAAGGTCAAGGTTAGATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp TTTGTGTGTTATGTGACATATTTGTGTGGCGTGCTGTaGGTTGAGGCCTTTAGGAGAAAGAAGACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: FVCYVTYLCGVL*VEAFRRKKTQA
Trigger: GGCCTGGGTCTTCTTTCTCCTAAAGGCCTCAACCCACAGCACGCCACACAAATATGTCACATAACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp CCCATCCTGACTAGAGTGGAAGCTCATTCCTGGGCCTaGGCTGGAGATAATGATAGTAATAGAGAACCTTGT +
Preference number: 6 (lower is better)
Translates to: PILTRVEAHSWA*AGDNDSNREPC
Trigger: ACAAGGTTCTCTATTACTATCATTATCTCCAGCCCAGGCCCAGGAATGAGCTTCCACTCTAGTCAGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CCA 72 bp GCTTCACCCATCCTGACTAGAGTGGAAGCTCATTCCTaGGCCTGGGCTGGAGATAATGATAGTAATAGAGAA +
Preference number: 6 (lower is better)
Translates to: ASPILTRVEAHS*AWAGDNDSNRE
Trigger: TTCTCTATTACTATCATTATCTCCAGCCCAGGCCCAGGAATGAGCTTCCACTCTAGTCAGGATGGGTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS CAA 72 bp TCCACTTTCCCAGGTCTGGAATTCCTTTGGTTCAACTaGTTCTGTCACTTCAGCTTCTTGTCCGGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: STFPGLEFLWFN*FCHFSFLSGCH
Trigger: GTGACAGCCGGACAAGAAGCTGAAGTGACAGAACAAGTTGAACCAAAGGAATTCCAGACCTGGGAAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS TCA 72 bp TTTTCTGAATGGATAATTACTCCCTCCCACCACGATTaGGCTGTAGGTCAGCTCTGTGCTGGTGCCTTACAA +
Preference number: 6 (lower is better)
Translates to: FSEWIITPSHHD*AVGQLCAGALQ
Trigger: TTGTAAGGCACCAGCACAGAGCTGACCTACAGCTCAATCGTGGTGGGAGGGAGTAATTATCCATTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525457.5
CDS TCA 72 bp TCTGTCTTGGGAGGAAATGTCACTGGCCTTCGAGAATaGCAATTGAGGTCATTAGGATGGCACTGTGGCAAT +
Preference number: 6 (lower is better)
Translates to: SVLGGNVTGLRE*QLRSLGWHCGN
Trigger: ATTGCCACAGTGCCATCCTAATGACCTCAATTGTCATTCTCGAAGGCCAGTGACATTTCCTCCCAAGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp AGCAACAGAGGTGGCTTTAACAAAAAGATAAAGCATTaGAAGGCACCTCAAGGCAGCAGCGCTGCCAAATGT +
Preference number: 6 (lower is better)
Translates to: SNRGGFNKKIKH*KAPQGSSAAKC
Trigger: ACATTTGGCAGCGCTGCTGCCTTGAGGTGCCTTGCAATGCTTTATCTTTTTGTTAAAGCCACCTCTGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CCA 72 bp AGGCCCTGTTCTAAGCACGTCACGTATATTAACCCATaGAGTCAAGGCAATCCTGTGAGGTTGGTTCTATTG +
Preference number: 6 (lower is better)
Translates to: RPCSKHVTYINP*SQGNPVRLVLL
Trigger: CAATAGAACCAACCTCACAGGATTGCCTTGACTCCATGGGTTAATATACGTGACGTGCTTAGAACAGGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS TCA 72 bp GACAAGAACATCCCCCATCCAGCGGTCCCACTCTGGTaGATTTATTCTAAAGGGAAAATCCCAACAGGTTTT +
Preference number: 6 (lower is better)
Translates to: DKNIPHPAVPLW*IYSKGKIPTGF
Trigger: AAAACCTGTTGGGATTTTCCCTTTAGAATAAATTCACCAGAGTGGGACCGCTGGATGGGGGATGTTCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp TCTTGCCTCCATGCTTTTACTCGATGCAGTTCCTTTTaGCTGGAATGCCTTCTATTTGCTTCTTTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SCLHAFTRCSSF*LECLLFASFQR
Trigger: CCTCTGGAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCGAGTAAAAGCATGGAGGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS TCA 72 bp CACAACCATCAGCTCTCTAAATCTTCCCAACAGCCCTaGGGCAAGCCTCATCTTTTGCATTTTACAGATAAG +
Preference number: 6 (lower is better)
Translates to: HNHQLSKSSQQP*GKPHLLHFTDK
Trigger: CTTATCTGTAAAATGCAAAAGATGAGGCTTGCCTCAGGGCTGTTGGGAAGATTTAGAGAGCTGATGGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp GCTTCCATTTTGATTGGGAAGGAAAGGCTGCGTGTCTaGAATATTCTATTATCAGTCCTTTCACTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: ASILIGKERLRV*NILLSVLSLLG
Trigger: GCCAAGCAGTGAAAGGACTGATAATAGAATATTGCAGACACGCAGCCTTTCCTTCCCAATCAAAATGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1
CDS GCA 72 bp TCGATGCAGTTCCTTTTGCCTGGAATGCCTTCTATTTaGTTCTTTCCAGAGGATGTAAACTCTTCATCCTTT +
Preference number: 6 (lower is better)
Translates to: SMQFLLPGMPSI*FFPEDVNSSSF
Trigger: AAAGGATGAAGAGTTTACATCCTCTGGAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CAA 90 bp ATGCTTTTACTCGATGCAGTTCCTTTTGCCTGGAATGCCTTCTATTaGCTTCTTTCCAGAGGATGTAAACTCTTCATCCTTTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: MLLLDAVPFAWNAFY*LLSRGCKLFILSNS
Trigger: AGAGTTTGAAAGGATGAAGAGTTTACATCCTCTGGAAAGAAGCAAATAGAAGGCATTCCAGGCAAAAGGAACTGCATCGAGTAAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393946.6
CDS CAA 72 bp AATAGCTCCCCTTATGAAGCACTTACTATTTATGATTaGCCAGGCCCTGTTCTAAGCACGTCACGTATATTA +
Preference number: 6 (lower is better)
Translates to: NSSPYEALTIYD*PGPVLSTSRIL
Trigger: TAATATACGTGACGTGCTTAGAACAGGGCCTGGCAAATCATAAATAGTAAGTGCTTCATAAGGGGAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531392.1