RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYT11 (Homo sapiens)

Ensembl gene IDs: ENSG00000132718

Ensembl transcript IDs: ENST00000368324.5

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCACTGCGCCCGGCCCCAAGTTTACCTATTATCCATGGAGTCTGTaGCATCTGCAAAGTCTCAACGTTGGAGACACAGCTGCTGTAGGA +
Preference number: 1 (lower is better)
Translates to: ATAPGPKFTYYPWSL*HLQSLNVGDTAAVG
Trigger: TCCTACAGCAGCTGTGTCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAACTTGGGGCCGGGCGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 90 bp TGTCACTGTCATGGCCATAGTACAAGCCTTCCAAGAAAAGGGACCTaGGTTATTCCCTCTCCTGAGCAAGCTGCCCCTGTCCCACAAACC +
Preference number: 1 (lower is better)
Translates to: CHCHGHSTSLPRKGT*VIPSPEQAAPVPQT
Trigger: GGTTTGTGGGACAGGGGCAGCTTGCTCAGGAGAGGGAATAACGCAGGTCCCTTTTCTTGGAAGGCTTGTACTATGGCCATGACAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 90 bp TTTTCTGGCAAAGACACTGAGGCAGTTCCTAGGCTACAGAACAACTaGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCA +
Preference number: 1 (lower is better)
Translates to: FSGKDTEAVPRLQNN*FLPCHLSTHCSVDP
Trigger: TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTGTAGCCTAGGAACTGCCTCAGTGTCTTTGCCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 90 bp TTCCAACCCATCAACCAAGAAATGGCTGTCACTACAGTAGATAGCTaGAAAGGGGAATGGCTGTCGTCACTTGTCTCCTCTCCTTGTCCT +
Preference number: 1 (lower is better)
Translates to: FQPINQEMAVTTVDS*KGEWLSSLVSSPCP
Trigger: AGGACAAGGAGAGGAGACAAGTGACGACAGCCATTCCCCTTTGCAGCTATCTACTGTAGTGACAGCCATTTCTTGGTTGATGGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 90 bp GCACACACAGCAGGGCAAAGACCAGACTATCTCCACCTGTTGTTTTaGATTGTTTCTGGGAAGGAAACAAAAGCGGGTTTGCTCAGCGAT +
Preference number: 1 (lower is better)
Translates to: AHTAGQRPDYLHLLF*IVSGKETKAGLLSD
Trigger: ATCGCTGAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCTGCTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 90 bp AGGCTACAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTaGTCAGTAGACCCAAAGATGCAAGGAATAAAGCTACAAGGAAAT +
Preference number: 1 (lower is better)
Translates to: RLQNNWFLPCHLSTH*SVDPKMQGIKLQGN
Trigger: ATTTCCTTGTAGCTTTATTCCTTGCATCTTTGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTGTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 90 bp CTAACCTTTCACGCCCTGGATCAAGCTGTTAAGCAACAGCTTGACTaGGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAG +
Preference number: 1 (lower is better)
Translates to: LTFHALDQAVKQQLD*VPPQVGKNIYCLSK
Trigger: CTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAGCTTGATCCAGGGCGTGAAAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 90 bp AGACACAAGGTAAAGAAAGACAACCACTTTGGAGAGGGATCATGGTaGGGGCAATGTCACTGTCATGGCCATAGTACAAGCCTTCCAAGA +
Preference number: 1 (lower is better)
Translates to: RHKVKKDNHFGEGSW*GQCHCHGHSTSLPR
Trigger: TCTTGGAAGGCTTGTACTATGGCCATGACAGTGACATTGCCCTCACCATGATCCCTCTCCAAAGTGGTTGTCTTTCTTTACCTTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 90 bp TGGCAGGGACAAGAACAGAGAGTAGGCTTTGTGACTGCTCAGAATTaGTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTT +
Preference number: 1 (lower is better)
Translates to: WQGQEQRVGFVTAQN*SALSRTWAEIKQKV
Trigger: AACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGCAATTCTGAGCAGTCACAAAGCCTACTCTCTGTTCTTGTCCCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 90 bp AGGGCAAAGACCAGACTATCTCCACCTGTTGTTTTGCATTGTTTCTaGGAAGGAAACAAAAGCGGGTTTGCTCAGCGATTTCTGATCTTT +
Preference number: 1 (lower is better)
Translates to: RAKTRLSPPVVLHCF*EGNKSGFAQRFLIF
Trigger: AAAGATCAGAAATCGCTGAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 90 bp ATCAAGATCTCTTCAGAGAAGGAGCAACTGTTGGAAAATCAGAAGTaGCCATTCCCTAACCTATTCCTGACCACGAATGCCTTGTGCAAA +
Preference number: 1 (lower is better)
Translates to: IKISSEKEQLLENQK*PFPNLFLTTNALCK
Trigger: TTTGCACAAGGCATTCGTGGTCAGGAATAGGTTAGGGAATGGTCACTTCTGATTTTCCAACAGTTGCTCCTTCTCTGAAGAGATCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 90 bp TCTAGAGCACTGTCCATAAACATGTCCATCTTGGCTGTGCTCCAGTaGGATGAACTGAAAGAAGGAATAACTCATAAAGGGACCTTTGTT +
Preference number: 1 (lower is better)
Translates to: SRALSINMSILAVLQ*DELKEGITHKGTFV
Trigger: AACAAAGGTCCCTTTATGAGTTATTCCTTCTTTCAGTTCATCTCACTGGAGCACAGCCAAGATGGACATGTTTATGGACAGTGCTCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 90 bp TGGATCAAGCTGTTAAGCAACAGCTTGACTGAGTTCCTCCTCAGGTaGGCAAAAATATCTACTGCCTATCCAAGTTTACCTAGTTTATTT +
Preference number: 1 (lower is better)
Translates to: WIKLLSNSLTEFLLR*AKISTAYPSLPSLF
Trigger: AAATAAACTAGGTAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAGCTTGATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 90 bp ATTGTTTCTGGGAAGGAAACAAAAGCGGGTTTGCTCAGCGATTTCTaGTCTTTAGACATTAAGGCGATGAAGAGGAACCATTTAAATTTT +
Preference number: 1 (lower is better)
Translates to: IVSGKETKAGLLSDF*SLDIKAMKRNHLNF
Trigger: AAAATTTAAATGGTTCCTCTTCATCGCCTTAATGTCTAAAGATCAGAAATCGCTGAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 90 bp TTTAGAGAAGTCATCAAGTTTGATAAAATCCAAGTTCTGATGTCTTaGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAGGTCTG +
Preference number: 1 (lower is better)
Translates to: FREVIKFDKIQVLMS*MHKSDVFSVLQLGL
Trigger: CAGACCTAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTGGATTTTATCAAACTTGATGACTTCTCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAAGCCGGGCATGCTCGTaGGTGCCTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPSRACS*VPVIPA
Trigger: AGCTGGGATTACAGGCACCCACGAGCATGCCCGGCT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCACAGCCCAGAGTGCAGTaGCATGATCATGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPQPRVQ*HDHGSL
Trigger: CAGTGAGCCATGATCATGCCACTGCACTCTGGGCTG...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAGGAGTCTGTGCCATCTaGAAAGTCTCAACGTTGGAG +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPGVCAI*KVSTLE
Trigger: CTCCAACGTTGAGACTTTGCAGATGGCACAGACTCC...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATTACCCAGCCCAGAGTaGAGTGGCATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLPSPE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCTGGGCTGGGTAA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTACTGGTCTTGAACTCCTaGGCTCAAGCGATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLVLNS*AQAIFP
Trigger: TGGAAAGATCGCTTGAGCCCAGGAGTTCAAGACCAG...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGGCGGGTGGATCACCTaGGGTCTGGAATTCGAGACC +
Preference number: 2 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGGGWIT*GLEFET
Trigger: GGTCTCGAATTCCAGACCTCAGGTGATCCACCCGCC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 90 bp CTCTTTCTCCTGCAAACCTTGCCTCATCCACCCCACCTTTGTTTCTaGGCTTACTGCAGACCTCTAGACCTTGAGGTCAAAGAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LFLLQTLPHPPHLCF*AYCRPLDLEVKEQR
Trigger: TCTCTGCTCTTTGACCTCAAGGTCTAGAGGTCTGCAGTAAGCCAAGAAACAAAGGTGGGGTGGATGAGGCAAGGTTTGCAGGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCAAGCAACAGCTTGACTaGGTTCCTCCTCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSKQQLD*VPPQVG
Trigger: GCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTT...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAGTTCTTCTATGGAAGTaGACACTTCAGTCTCAACTA +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPVLLWK*TLQSQL
Trigger: TAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAAC...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATTGCTCAGCGATTTCTaGTCTTTAGACATTAAGGCG +
Preference number: 2 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLLSDF*SLDIKA
Trigger: CGCCTTAATGTCTAAAGATCAGAAATCGCTGAGCAA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCATCTAAAGCATCTCCATaGTCGGCATTTCCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPSKASP*SAFPEK
Trigger: TTTTTCTGGAAATGCCGACCATGGAGATGCTTTAGA...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 90 bp ACAGAGGCACACACAGCAGGGCAAAGACCAGACTATCTCCACCTGTaGTTTTGCATTGTTTCTGGGAAGGAAACAAAAGCGGGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: TEAHTAGQRPDYLHL*FCIVSGKETKAGLL
Trigger: GAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCTGCTGTGTGTGCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTTGAGATCTCACCATTaGACTCCAGCCCGGGCAACA +
Preference number: 2 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSLRSHH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAATGGTGAGATCTCAA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCACAAGTTCTGATGTCTTaGATGCATAAGTCTGATGTA +
Preference number: 2 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPQVLMS*MHKSDV
Trigger: TACATCAGACTTATGCATCCAAGACATCAGAACTTG...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGACTGGAGGGCAGAGGTTaGAGTGAGTTGAGATCTCAC +
Preference number: 2 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRLEGRG*SELRSH
Trigger: GTGAGATCTCAACTCACTGCAACCTCTGCCCTCCAG...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 90 bp ACACAGCAGGGCAAAGACCAGACTATCTCCACCTGTTGTTTTGCATaGTTTCTGGGAAGGAAACAAAAGCGGGTTTGCTCAGCGATTTCT +
Preference number: 2 (lower is better)
Translates to: TQQGKDQTISTCCFA*FLGRKQKRVCSAIS
Trigger: AGAAATCGCTGAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCTGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATTCTCCTGCAAACCTTaGCTCATCCACCCCACCTTT +
Preference number: 2 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEFSCKP*LIHPTF
Trigger: AAAGGTGGGGTGGATGAGGCAAGGTTTGCAGGAGAA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAAGTATTTACATTTCATaGGGTATAGGACAGAGACTA +
Preference number: 2 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELSIYIS*GIGQRL
Trigger: TAGTCTCTGTCCTATACCCCATGAAATGTAAATACT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAGGGAGGAGAATCACTTaGACCTGGAGGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLGRRIT*TWRAEV
Trigger: AACCTCTGCCCTCCAGGTTCAAGTGATTCTCCTCCC...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTATCCATGGAGTCTGTaGCATCTGCAAAGTCTCAAC +
Preference number: 2 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSYPWSL*HLQSLN
Trigger: GTTGAGACTTTGCAGATGGCACAGACTCCATGGATA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTTTTCTTCTGCAGAGGTaGGGAGTGGGAGAAATTCTC +
Preference number: 2 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGFLLQR*GVGEIL
Trigger: GAGAATTTCTCCCACTCCCCACCTCTGCAGAAGAAA...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCAGCTGCAAAGGGGAATaGCTGTCGTCACTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPISCKGE*LSSLVS
Trigger: GGAGACAAGTGACGACAGCCATTCCCCTTTGCAGCT...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGAGTTCCTCCTCAGGTaGGCAAAAATATCTACTGCC +
Preference number: 2 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGEFLLR*AKISTA
Trigger: GGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCATCATTGCTAAGAACTaGTCTGCAGCTGTGGTCATA +
Preference number: 2 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSIIAKN*SAAVVI
Trigger: TATGACCACAGCTGCAGATCAGTTCTTAGCAATGAT...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAAGGGCCCCTGTTTTATaGAGCAAAGCTAACCTCATT +
Preference number: 2 (lower is better)
Translates to: PTPFAKARLKVMFFYGSERAPVL*SKANLI
Trigger: AATGAGGTTAGCTTTGCTTCATAAAACAGGGGCCCT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCAGACCTCTAGACCTTaGGGTCAAAGAGCAGAGATA +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPIQTSRP*GQRAEI
Trigger: TATCTCTGCTCTTTGACCTCAAGGTCTAGAGGTCTG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAGCTTTTGGGATCAGCTaGATGTGTTCATTGGTACTA +
Preference number: 2 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEAFGIS*MCSLVL
Trigger: TAGTACCAATGAACACATCCAGCTGATCCCAAAAGC...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGACTTCTACAACTAAAATaGGGTTTGGAGTCCACTTCT +
Preference number: 2 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRLLQLK*GLESTS
Trigger: AGAAGTGGACTCCAAACCTCATTTTAGTTGTAGAAG...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTGTTTCTTGGCTTACTaGAGACCTCTAGACCTTGAG +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPICFLAY*RPLDLE
Trigger: CTCAAGGTCTAGAGGTCTGCAGTAAGCCAAGAAACA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATCTCTCAACCTCTATTaGCCATTGGTAGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: PTPFAKARLKVMFFYGSESLNLY*PLVEEE
Trigger: TTCTTCTTCTACCAATGGGCAATAGAGGTTGAGAGA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAGCTGGATGTGTTCATTaGTACTATCCTATAGCTGAA +
Preference number: 2 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRAGCVH*YYPIAE
Trigger: TTCAGCTATAGGATAGTACCAATGAACACATCCAGC...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCCTGAAAACAGCTTTTaGGATCAGCTGGATGTGTTC +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPIPENSF*DQLDVF
Trigger: GAACACATCCAGCTGATCCCAAAAGCTGTTTTCAGG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATTTACCTATTATCCATaGAGTCTGTGCCATCTGCAA +
Preference number: 2 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGFTYYP*SLCHLQ
Trigger: TTGCAGATGGCACAGACTCCATGGATAATAGGTAAA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 90 bp TTGAATTCTAATCCCAGAAAGATGCTGAATCTCTCTCAACCTCTATaGCCCATTGGTAGAAGAAGAATTGCATCCTGTAGTTCCTCCATC +
Preference number: 2 (lower is better)
Translates to: LNSNPRKMLNLSQPL*PIGRRRIASCSSSI
Trigger: GATGGAGGAACTACAGGATGCAATTCTTCTTCTACCAATGGGCAATAGAGGTTGAGAGAGATTCAGCATCTTTCTGGGATTAGAATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCCTTGTCCTTATACCTaGAAACAGCTTTTGGGATCA +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPIPCPYT*KQLLGS
Trigger: TGATCCCAAAAGCTGTTTTCAGGTATAAGGACAAGG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTAGGAGTAAAGAGACTTaGATTCTAATCCCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGRSKET*ILIPER
Trigger: TCTTTCTGGGATTAGAATTCAAGTCTCTTTACTCCT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAAATTCCTCTTTCTCCTaGAAACCTTGCCTCATCCAC +
Preference number: 2 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLNSSFS*KPCLIH
Trigger: GTGGATGAGGCAAGGTTTGCAGGAGAAAGAGGAATT...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCACTGATCTGCAGCTGTaGTCATATAGGGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: RKTKASVILQTSDDFQPITDLQL*SYRVFF
Trigger: AAAGAACACCCTATATGACCACAGCTGCAGATCAGT...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGACCATGGATTAAAATCTaGAACTTGATATTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRPWIKI*NLILAV
Trigger: AACTGCCAATATCAAGTTGCAGATTTTAATCCATGG...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 72 bp GCCACTGCGCCCGGCCCCAAGTTTACCTATTATCCATaGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGA +
Preference number: 3 (lower is better)
Translates to: ATAPGPKFTYYP*SLCHLQSLNVG
Trigger: TCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAACTTGGGGCCGGGCGCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAAGAGGTTGCAGTGAGTaGAGATCTCACCATTGCACT +
Preference number: 3 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPRGCSE*RSHHCT
Trigger: AGTGCAATGGTGAGATCTCAACTCACTGCAACCTCT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATGTGACTGCTCAGAATaGCTCTGCATTGTCAAGAAC +
Preference number: 3 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELCDCSE*LCIVKN
Trigger: GTTCTTGACAATGCAGAGCAATTCTGAGCAGTCACA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 72 bp CCCGGCCCCAAGTTTACCTATTATCCATGGAGTCTGTaGCATCTGCAAAGTCTCAACGTTGGAGACACAGCT +
Preference number: 3 (lower is better)
Translates to: PGPKFTYYPWSL*HLQSLNVGDTA
Trigger: AGCTGTGTCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAACTTGGGGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAGTTGAGATCTCACCATaGCACTCCAGCCCGGGCAAC +
Preference number: 3 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRVEISP*HSSPGN
Trigger: GTTGCCCGGGCTGGAGTGCAATGGTGAGATCTCAAC...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATTGGTAGAAGAAGAATaGCATCCTGTAGTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLVEEE*HPVVPP
Trigger: TGGAGGAACTACAGGATGCAATTCTTCTTCTACCAA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 72 bp CACGCCCTGGATCAAGCTGTTAAGCAACAGCTTGACTaGGTTCCTCCTCAGGTGGGCAAAAATATCTACTGC +
Preference number: 3 (lower is better)
Translates to: HALDQAVKQQLD*VPPQVGKNIYC
Trigger: GCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAGCTTGATCCAGGGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 72 bp AACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTaGTCAGTAGACCCAAAGATGCAAGGAATAAAGCTA +
Preference number: 3 (lower is better)
Translates to: NNWFLPCHLSTH*SVDPKMQGIKL
Trigger: TAGCTTTATTCCTTGCATCTTTGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAAGGGAGGAGAATCACTaGAACCTGGAGGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEREENH*NLEGRG
Trigger: ACCTCTGCCCTCCAGGTTCAAGTGATTCTCCTCCCT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 72 bp ATGGCTGTCACTACAGTAGATAGCTGCAAAGGGGAATaGCTGTCGTCACTTGTCTCCTCTCCTTGTCCTTAT +
Preference number: 3 (lower is better)
Translates to: MAVTTVDSCKGE*LSSLVSSPCPY
Trigger: ATAAGGACAAGGAGAGGAGACAAGTGACGACAGCCATTCCCCTTTGCAGCTATCTACTGTAGTGACAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTCATCCACCCCACCTTaGTTTCTTGGCTTACTGCAG +
Preference number: 3 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSSSTPP*FLGLLQ
Trigger: CTGCAGTAAGCCAAGAAACAAAGGTGGGGTGGATGA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGACCCCACCTTTGTTTCTaGGCTTACTGCAGACCTCTA +
Preference number: 3 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGPHLCF*AYCRPL
Trigger: TAGAGGTCTGCAGTAAGCCAAGAAACAAAGGTGGGG...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAAATGGCTGTCGTCACTaGTCTCCTCTCCTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRNGCRH*SPLLVL
Trigger: AAGGACAAGGAGAGGAGACAAGTGACGACAGCCATT...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 72 bp GCAGGGCAAAGACCAGACTATCTCCACCTGTTGTTTTaGATTGTTTCTGGGAAGGAAACAAAAGCGGGTTTG +
Preference number: 3 (lower is better)
Translates to: AGQRPDYLHLLF*IVSGKETKAGL
Trigger: CAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGACTCTCTCAACCTCTATaGCCCATTGGTAGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGLSQPL*PIGRRR
Trigger: TCTTCTTCTACCAATGGGCAATAGAGGTTGAGAGAG...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 72 bp GGGAAGGAAACAAAAGCGGGTTTGCTCAGCGATTTCTaGTCTTTAGACATTAAGGCGATGAAGAGGAACCAT +
Preference number: 3 (lower is better)
Translates to: GKETKAGLLSDF*SLDIKAMKRNH
Trigger: ATGGTTCCTCTTCATCGCCTTAATGTCTAAAGATCAGAAATCGCTGAGCAAACCCGCTTTTGTTTCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CCA 72 bp CTGTTAAGCAACAGCTTGACTGAGTTCCTCCTCAGGTaGGCAAAAATATCTACTGCCTATCCAAGTTTACCT +
Preference number: 3 (lower is better)
Translates to: LLSNSLTEFLLR*AKISTAYPSLP
Trigger: AGGTAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 72 bp CTGTCCATAAACATGTCCATCTTGGCTGTGCTCCAGTaGGATGAACTGAAAGAAGGAATAACTCATAAAGGG +
Preference number: 3 (lower is better)
Translates to: LSINMSILAVLQ*DELKEGITHKG
Trigger: CCCTTTATGAGTTATTCCTTCTTTCAGTTCATCTCACTGGAGCACAGCCAAGATGGACATGTTTATGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR GCA 72 bp CAAGAACAGAGAGTAGGCTTTGTGACTGCTCAGAATTaGTCTGCATTGTCAAGAACATGGGCTGAAATCAAA +
Preference number: 3 (lower is better)
Translates to: QEQRVGFVTAQN*SALSRTWAEIK
Trigger: TTTGATTTCAGCCCATGTTCTTGACAATGCAGAGCAATTCTGAGCAGTCACAAAGCCTACTCTCTGTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTAACCTCTATTGCCCATaGGTAGAAGAAGAATTGCAT +
Preference number: 3 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGNLYCP*VEEELH
Trigger: ATGCAATTCTTCTTCTACCAATGGGCAATAGAGGTT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR-3UTR CAA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAATCTGCAACTTGATATaGGCAGTTAGGCTAATTTCT +
Preference number: 3 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEICNLI*AVRLIS
Trigger: AGAAATTAGCCTAACTGCCAATATCAAGTTGCAGAT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 72 bp AGAATTATGCAGCTCGTTTTGAGGAAAAGAATGCTCTaGAAGAATCCAACTTATCTTCATTCACTCAGTCAC +
Preference number: 3 (lower is better)
Translates to: RIMQLVLRKRML*KNPTYLHSLSH
Trigger: GTGACTGAGTGAATGAAGATAAGTTGGATTCTTTCAGAGCATTCTTTTCCTCAAAACGAGCTGCATAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR TCA 72 bp GTAAGACATAAATTCCAAGAATTATGCAGCTCGTTTTaGGGAAAAGAATGCTCTGAAAGAATCCAACTTATC +
Preference number: 3 (lower is better)
Translates to: VRHKFQELCSSF*GKECSERIQLI
Trigger: GATAAGTTGGATTCTTTCAGAGCATTCTTTTCCTCAAAACGAGCTGCATAATTCTTGGAATTTATGTCTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAACGATGGATCAGGCCTaGGGTAGGAGGGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPTMDQA*GRREEP
Trigger: GGGCTCCTCCCTCCTACCTCAGGCCTGATCCATCGT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAGTCCACCCCTGCCAGTaGCACCATGACCTCGCCAAT +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPVHPCQ*HHDLAN
Trigger: ATTGGCGAGGTCATGGTGCCACTGGCAGGGGTGGAC...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAAGCCGGGCATGCTCGTaGGTGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELSRACS*VPVIPA
Trigger: AGCTGGGATTACAGGCACCCACGAGCATGCCCGGCT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAGCACAGAGGCCCCGATaGGGCCGGCCACCACCGGTG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEAQRPR*GRPPPV
Trigger: CACCGGTGGTGGCCGGCCTCATCGGGGCCTCTGTGC...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAAAGCAACAGCTTGACTaGGTTCCTCCTCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPKQQLD*VPPQVG
Trigger: GCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCCCAGCGGACGCCTCCTaGGACGGTCCGGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSPADAS*DGPAPS
Trigger: ACTAGGGGCCGGACCGTCGCAGGAGGCGTCCGCTGG...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTACTCTGTGCCACAGGCTaGTATGACAGAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLCATG*YDRDTW
Trigger: CCAGGTGTCTCTGTCATATCAGCCTGTGGCACAGAG...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATCTTCCGCAGCACTCTaGTCTTCACCCGATGCCGTT +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELSSAAL*SSPDAV
Trigger: AACGGCATCGGGTGAAGACCAGAGTGCTGCGGAAGA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCACAGAGACTAGTGGTATaGCCCCAACTGATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPQRLVV*PQLMVK
Trigger: CTTCACCATCAGTTGGGGTCATACCACTAGTCTCTG...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCACCAAGAAAAGGGACCTaGGTTATTCCCTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPPRKGT*VIPSPE
Trigger: CTCAGGAGAGGGAATAACGCAGGTCCCTTTTCTTGG...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAACGTTTTTGCAATGGTaGGACAGCTCTGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELTFLQW*DSSGNP
Trigger: AGGGTTCCCAGAGCTGTCTCACCATTGCAAAAACGT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGCTGGGGTCCACCCCTaGCAGTGGCACCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGAGVHP*QWHHDL
Trigger: GAGGTCATGGTGCCACTGGCAGGGGTGGACCCCAGC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAGGCTGTGACACTGTGTaGCCCCAGGATCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGGCDTV*PQDQPP
Trigger: GGGAGGCTGATCCTGGGGGCACACAGTGTCACAGCC...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAAATTCCTCTTTCTCCTaGAAACCTTGCCTCATCCAC +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPNSSFS*KPCLIH
Trigger: GTGGATGAGGCAAGGTTTGCAGGAGAAAGAGGAATT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAAGGAGGGAGGAGCCCTaGACTGTCCGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRRREEP*TVRLFA
Trigger: GGCAAAGAGGCGGACAGTGCAGGGCTCCTCCCTCCT...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATCAGACTGTGCCACTTaGCCACAGGCTTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSESDCAT*PQACGG
Trigger: GCCCCCGCAAGCCTGTGGCCAAGTGGCACAGTCTGA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCCTGCTGGTGGCAGCATaGCCAGACAAAGACGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSLLVAA*PDKDGH
Trigger: GTGACCGTCTTTGTCTGGTCATGCTGCCACCAGCAG...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCATTGCTCAGCGATTTCTaGTCTTTAGACATTAAGGCG +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPLLSDF*SLDIKA
Trigger: CGCCTTAATGTCTAAAGATCAGAAATCGCTGAGCAA...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGACAGGCCAGCCTCTGCTaGGTCCACCAACAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRQASLC*VHQQVP
Trigger: AGGAACCTGTTGGTGGACGCAGCAGAGGCTGGCCTG...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAGTTGTACCTTGCCTGTaGTGGGGTCCACCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRVVPCL*WGPPLP
Trigger: TGGCAGGGGTGGACCCCAGCACAGGCAAGGTACAAC...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCAATTCCTGACCACGAATaGCTTGTGCAAAAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPIPDHE*LVQKLR
Trigger: TCTTAGCTTTTGCACAAGGCATTCGTGGTCAGGAAT...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGAGAGGAGAGTGGGGTaGGGCTGTTTTCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGERRVG*GCFPRR
Trigger: ACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGATGGTCAGTTGTACCTTaGCTGTGCTGGGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRWSVVP*LCWGPP
Trigger: GGGTGGACCCCAGCACAGGCAAGGTACAACTGACCA...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAGTGACTGCTCAGAATTaGTCTGCATTGTCAAGAACA +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELVTAQN*SALSRT
Trigger: TGTTCTTGACAATGCAGAGCAATTCTGAGCAGTCAC...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTACTCCACCTGTTGTTTTaGATTGTTTCTGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELLHLLF*IVSGKE
Trigger: TTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAG...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTACTGGTCATCCATCACTaGCAGCCCATGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLLVIHH*QPMGLL
Trigger: CAGGAGGCCCATGGGCTGCCAGTGATGGATGACCAG...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAACTGATCTGCAGCTGTaGTCATATAGGGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELTDLQL*SYRVFF
Trigger: AAAGAACACCCTATATGACCACAGCTGCAGATCAGT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 72 bp CTGCAAACCTTGCCTCATCCACCCCACCTTTGTTTCTaGGCTTACTGCAGACCTCTAGACCTTGAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQTLPHPPHLCF*AYCRPLDLEVK
Trigger: TTTGACCTCAAGGTCTAGAGGTCTGCAGTAAGCCAAGAAACAAAGGTGGGGTGGATGAGGCAAGGTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAGCCGGCCACCACCGGTaGCACATCAAAGCTAGGTCG +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLAGHHR*HIKARS
Trigger: CGACCTAGCTTTGATGTGTCACCGGTGGTGGCCGGC...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTTGCCACAGGCTGATATaGCAGAGACACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGCHRLI*QRHLEL
Trigger: GAGCTCCAGGTGTCTCTGTCATATCAGCCTGTGGCA...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCGCAAGTGTCTGGCTTTaGGGACCACCACTGTCATTC +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSASVWL*GPPLSF
Trigger: GAATGACAGTGGTGGTCCTCAAAGCCAGACACTTGC...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCGTTATTCCCTCTCCTaGGCAAGCTGCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIRYSLS*ASCPCP
Trigger: GGGACAGGGGCAGCTTGCTCAGGAGAGGGAATAACG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCGGAGAGGGATCATGGTaGGGGCAATGTCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSGEGSW*GQCHCH
Trigger: ATGACAGTGACATTGCCCTCACCATGATCCCTCTCC...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATACTCGCTCAGACTGTaGCACTTGGCCACAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEYSLRL*HLATGL
Trigger: CAAGCCTGTGGCCAAGTGGCACAGTCTGAGCGAGTA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATCTCTCAACCTCTATTaGCCATTGGTAGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELSLNLY*PLVEEE
Trigger: TTCTTCTTCTACCAATGGGCAATAGAGGTTGAGAGA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTATGGTGAGACAGCTCTaGGAACCCTCGGTCAGTACC +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGMVRQL*EPSVST
Trigger: GGTACTGACCGAGGGTTCCCAGAGCTGTCTCACCAT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATCAGATCCCTGGGTCTaGTCATCCATCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGSDPWV*SSITGS
Trigger: GCTGCCAGTGATGGATGACCAGACCCAGGGATCTGA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAACAGCCCAGAGTGCAGTaGCATGATCATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEQPRVQ*HDHGSL
Trigger: CAGTGAGCCATGATCATGCCACTGCACTCTGGGCTG...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 72 bp CCTTTCACGCCCTGGATCAAGCTGTTAAGCAACAGCTaGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCT +
Preference number: 4 (lower is better)
Translates to: PFTPWIKLLSNS*TEFLLRWAKIS
Trigger: AGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAGCTTGATCCAGGGCGTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTACCTGAGAGACCGGTaGTATCCATCTTCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSYLRDR*YPSSAS
Trigger: ACTTGCCGAAGATGGATATCACCGGTCTCTCAGGTA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAACTGGTCTTCACCCGATaGCGTTTGTCAGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSELVFTR*RLSGRM
Trigger: CATCCTTCCTGACAAACGGCATCGGGTGAAGACCAG...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATTACCCAGCCCAGAGTaGAGTGGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSELPSPE*SGMIMA
Trigger: AGCCATGATCATGCCACTGCACTCTGGGCTGGGTAA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATATGACAGAGACACCTaGAGCTCCCCTCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGYDRDT*SSPLLM
Trigger: CATCAGCAGAGGGGAGCTCCAGGTGTCTCTGTCATA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAAGCTGCAAAGGGGAATaGCTGTCGTCACTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGSCKGE*LSSLVS
Trigger: GGAGACAAGTGACGACAGCCATTCCCCTTTGCAGCT...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAAGGCTACAGAACAACTaGTTCCTCCCCTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGRLQNN*FLPCHL
Trigger: GAGGTGACAGGGGAGGAACCAGTTGTTCTGTAGCCT...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAATCCTCCTCTGGAGATaGTGGAGAGGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEILLWR*WRGGFA
Trigger: AGCAAAACCACCTCTCCATCATCTCCAGAGGAGGAT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCGGGAGGAGAATCACTTaGACCTGGAGGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIGRRIT*TWRAEV
Trigger: AACCTCTGCCCTCCAGGTTCAAGTGATTCTCCTCCC...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTTCCCTAACCTATTCCTaGCCACGAATGCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGSLTYS*PRMPCA
Trigger: TGCACAAGGCATTCGTGGTCAGGAATAGGTTAGGGA...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTGCTTCTTCTCTGCCTaGTGGTGGCAGCATGACCAG +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPICFFSA*WWQHDQ
Trigger: CTGGTCATGCTGCCACCAGCAGGCAGAGAAGAAGCA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTTGGCAATGCGCTTTCTaGCGTAGTAGACGTTCACCT +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGWQCAF*RSRRSP
Trigger: AGGTGAACGTCTACTACGGCAGAAAGCGCATTGCCA...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGATTCTCCTGCAAACCTTaGCTCATCCACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRFSCKP*LIHPTF
Trigger: AAAGGTGGGGTGGATGAGGCAAGGTTTGCAGGAGAA...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTAATGATCATGGCTCACTaGAGCCTCTACCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLMIMAH*SLYLWA
Trigger: AGCCCAGAGGTAGAGGCTGCAGTGAGCCATGATCAT...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTACACCTCAGCACCCACTaGTCAGTAGACCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLHLSTH*SVDPKM
Trigger: CATCTTTGGGTCTACTGAGCAGTGGGTGCTGAGGTG...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 72 bp CACACAGCAGGGCAAAGACCAGACTATCTCCACCTGTaGTTTTGCATTGTTTCTGGGAAGGAAACAAAAGCG +
Preference number: 4 (lower is better)
Translates to: HTAGQRPDYLHL*FCIVSGKETKA
Trigger: CGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCCCTGCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTTTTCTTCTTGTTGCTaGGGGTCTCTGGGTATATGC +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSFSSCC*GSLGIC
Trigger: GCATATACCCAGAGACCCTCAGCAACAAGAAGAAAA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTAGGATGCCATAGAAGGTaGAGGTCTCGTCAAACACAG +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLGCHRR*RSRQTQ
Trigger: CTGTGTTTGACGAGACCTTCACCTTCTATGGCATCC...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCAGAAGCGGTCAAAGCTaGGGACAAGGAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIRSGQS*GQGSAA
Trigger: TGCTGCACTTCCTTGTCCTCAGCTTTGACCGCTTCT...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTACGAGGAACTCGATGCTaGTATCAGGCAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLRGTRC*YQAGGQ
Trigger: CTGACCTCCTGCCTGATATCAGCATCGAGTTCCTCG...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAACAGACCTCTAGACCTTaGGGTCAAAGAGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEQTSRP*GQRAEI
Trigger: TATCTCTGCTCTTTGACCTCAAGGTCTAGAGGTCTG...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATCAGCTAAGAAACTTTaGGACGGCAAAGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGSAKKL*DGKVKG
Trigger: GCCCTTGACTTTGCCGTCTCAAAGTTTCTTAGCTGA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTTTGGCTGTGCTCCAGTaGGATGAACTGAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGLAVLQ*DELKEG
Trigger: TCCTTCTTTCAGTTCATCTCACTGGAGCACAGCCAA...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTTGAGATCTCACCATTaGACTCCAGCCCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPILRSHH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAATGGTGAGATCTCAA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGTTGCTGAGGGTCTCTaGGTATATGCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGVAEGL*VYADAF
Trigger: AAAGGCATCAGCATATACCCAGAGACCCTCAGCAAC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCCACCACCTCATTCTTaGTGGTGCGATCGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIPPPHS*WCDRSR
Trigger: TCGACTTCGATCGCACCACCAAGAATGAGGTGGTGG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
3UTR CAA 72 bp GGCAAAGACCAGACTATCTCCACCTGTTGTTTTGCATaGTTTCTGGGAAGGAAACAAAAGCGGGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GKDQTISTCCFA*FLGRKQKRVCS
Trigger: TGAGCAAACCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGTGGAGATAGTCTGGTCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAGACATAAGGATTACCTaGGAGACCGGTGATATCCAT +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEDIRIT*ETGDIH
Trigger: ATGGATATCACCGGTCTCTCAGGTAATCCTTATGTC...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTATGGTGGGTTCTTCTaGTTCTTCTCTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIYGGFF*FFSACW
Trigger: CCAGCAGGCAGAGAAGAAGCAGAAGAACCCACCATA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTTTTCTTCTTGGCAATaGGCTTTCTGCCGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSFSSWQ*AFCRSR
Trigger: TCTACTACGGCAGAAAGCGCATTGCCAAGAAGAAAA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTACTGGAGGGCAGAGGTTaGAGTGAGTTGAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLLEGRG*SELRSH
Trigger: GTGAGATCTCAACTCACTGCAACCTCTGCCCTCCAG...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATGTTTCTTGGCTTACTaGAGACCTCTAGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSECFLAY*RPLDLE
Trigger: CTCAAGGTCTAGAGGTCTGCAGTAAGCCAAGAAACA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCGGAGTCTGTGCCATCTaGAAAGTCTCAACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIGVCAI*KVSTLE
Trigger: CTCCAACGTTGAGACTTTGCAGATGGCACAGACTCC...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATATCCATGGAGTCTGTaGCATCTGCAAAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEYPWSL*HLQSLN
Trigger: GTTGAGACTTTGCAGATGGCACAGACTCCATGGATA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATGCTCAGAATTGCTCTaGATTGTCAAGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSECSELL*IVKNMG
Trigger: GCCCATGTTCTTGACAATGCAGAGCAATTCTGAGCA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCAGTAGGCTTTGTGACTaGTCAGAATTGCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSSRLCD*SELLCI
Trigger: AATGCAGAGCAATTCTGAGCAGTCACAAAGCCTACT...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAACCTGAAAACAGCTTTTaGGATCAGCTGGATGTGTTC +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEPENSF*DQLDVF
Trigger: GAACACATCCAGCTGATCCCAAAAGCTGTTTTCAGG...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCTGGTCTTGAACTCCTaGGCTCAAGCGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPILVLNS*AQAIFP
Trigger: TGGAAAGATCGCTTGAGCCCAGGAGTTCAAGACCAG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTAGAAAGACAACCACTTTaGAGAGGGATCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLERQPL*RGIMVR
Trigger: CCTCACCATGATCCCTCTCCAAAGTGGTTGTCTTTC...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAATGCCTTTGAGCATGTaGATAAACTTGTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSEMPLSM*INLYGG
Trigger: CCCACCATACAAGTTTATTCACATGCTCAAAGGCAT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTATCATTGCTAAGAACTaGTCTGCAGCTGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGIIAKN*SAAVVI
Trigger: TATGACCACAGCTGCAGATCAGTTCTTAGCAATGAT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGCTTTTGGGATCAGCTaGATGTGTTCATTGGTACTA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGAFGIS*MCSLVL
Trigger: TAGTACCAATGAACACATCCAGCTGATCCCAAAAGC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAGTTTTGCATTGTTTCTaGGAAGGAAACAAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGVLHCF*EGNKSG
Trigger: CCCGCTTTTGTTTCCTTCCCAGAAACAATGCAAAAC...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCAGAAGGAGCAACTGTTaGAAAATCAGAAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSRRSNC*KIRSDH
Trigger: ATGGTCACTTCTGATTTTCCAACAGTTGCTCCTTCT...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAGAAGGATGGTCATTTTaGTGTAGGGGTCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLEGWSF*CRGQIP
Trigger: AGGGATCTGACCCCTACATCAAAATGACCATCCTTC...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTAAGTAGACGTTCACCTTaGCATAAGGATTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLSRRSP*HKDYLR
Trigger: TCTCAGGTAATCCTTATGTCAAGGTGAACGTCTACT...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGACTTCTACAACTAAAATaGGGTTTGGAGTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGLLQLK*GLESTS
Trigger: AGAAGTGGACTCCAAACCTCATTTTAGTTGTAGAAG...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCAGGGCCCCTGTTTTATaGAGCAAAGCTAACCTCATT +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPIRAPVL*SKANLI
Trigger: AATGAGGTTAGCTTTGCTTCATAAAACAGGGGCCCT...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAGTTCTTCTATGGAAGTaGACACTTCAGTCTCAACTA +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGVLLWK*TLQSQL
Trigger: TAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAAC...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGCAAAAGCTAAGATGTaGCTCTCTTGTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGAKAKM*LSCLSF
Trigger: GAAAGAAAGACAAGAGAGTCACATCTTAGCTTTTGC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAAATGGGGCTTCAGAATaGTCCTGTCAGATTTACATT +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSENGASE*SCQIYI
Trigger: AATGTAAATCTGACAGGAGCATTCTGAAGCCCCATT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTAAACAAAAGCGGGTTTaGTCAGCGATTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGKQKRV*SAISDL
Trigger: AAGATCAGAAATCGCTGAGCAAACCCGCTTTTGTTT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTACACTGTCCGCCTCTTTaGCTTTTTCTGGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLHCPPL*LFLAKT
Trigger: TGTCTTTGCCAGAAAAAGGCAAAGAGGCGGACAGTG...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAACTGCTGATGCACTTCTaGATATTCCTTTTGATGATG +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSELLMHF*IFLLMM
Trigger: CATCATCAAAAGGAATATCCAGAAGTGCATCAGCAG...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTATTTCTTCTGCAGAGGTaGGGAGTGGGAGAAATTCTC +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLFLLQR*GVGEIL
Trigger: GAGAATTTCTCCCACTCCCCACCTCTGCAGAAGAAA...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGCTGGATGTGTTCATTaGTACTATCCTATAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGAGCVH*YYPIAE
Trigger: TTCAGCTATAGGATAGTACCAATGAACACATCCAGC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATCTAAAGCATCTCCATaGTCGGCATTTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSESKASP*SAFPEK
Trigger: TTTTTCTGGAAATGCCGACCATGGAGATGCTTTAGA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGATTTACCTATTATCCATaGAGTCTGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRFTYYP*SLCHLQ
Trigger: TTGCAGATGGCACAGACTCCATGGATAATAGGTAAA...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAAGGAGTAAAGAGACTTaGATTCTAATCCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PTPFAKARLKVMFFYGSERSKET*ILIPER
Trigger: TCTTTCTGGGATTAGAATTCAAGTCTCTTTACTCCT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGTCAAGAACATGGGCTaGAATCAAACAAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGVKNMG*NQTKGL
Trigger: TAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGAC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGACAAGTTCTGATGTCTTaGATGCATAAGTCTGATGTA +
Preference number: 4 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGQVLMS*MHKSDV
Trigger: TACATCAGACTTATGCATCCAAGACATCAGAACTTG...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTTATGCAGCTCGTTTTaGGGAAAAGAATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPILCSSF*GKECSE
Trigger: TTCAGAGCATTCTTTTCCTCAAAACGAGCTGCATAA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR TCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCTTGGAAAATCAGAAGTaGCCATTCCCTAACCTATTC +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPILENQK*PFPNLF
Trigger: GAATAGGTTAGGGAATGGTCACTTCTGATTTTCCAA...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAAGATGGGGTTCAAAGTaGACTTCTTCACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLRWGSK*TSSHGF
Trigger: AAACCCATGTGAAGAAGTGCACTTTGAACCCCATCT...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGAATTTTGATGGGTAATTaGTCTATACAAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRILMGN*SIQDPE
Trigger: CTCTGGATCTTGTATAGACCAATTACCCATCAAAAT...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTACCATGGATTAAAATCTaGAACTTGATATTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLPWIKI*NLILAV
Trigger: AACTGCCAATATCAAGTTGCAGATTTTAATCCATGG...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR GCA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAGTAATCAGAGGCTGTTaGTATAACGTTTTTGCAATG +
Preference number: 4 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLVIRGC*YNVFAM
Trigger: CATTGCAAAAACGTTATAGCAACAGCCTCTGATTAC...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CCA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCAGTATTTACATTTCATaGGGTATAGGACAGAGACTA +
Preference number: 4 (lower is better)
Translates to: RKTKASVILQTSDDFQPISIYIS*GIGQRL
Trigger: TAGTCTCTGTCCTATACCCCATGAAATGTAAATACT...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS GCA 90 bp GATGTCCCTGGTCAGTTGTACCTTGCCTGTGCTGGGGTCCACCCCTaGCAGTGGCACCATGACCTCGCCAATGACATCATCCCGAGAGAA +
Preference number: 5 (lower is better)
Translates to: DVPGQLYLACAGVHP*QWHHDLANDIIPRE
Trigger: TTCTCTCGGGATGATGTCATTGGCGAGGTCATGGTGCCACTGGCAGGGGTGGACCCCAGCACAGGCAAGGTACAACTGACCAGGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCACTCCCAGGACCATCTTaGTCTCTCCGCACTTTGATG +
Preference number: 5 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPLPGPS*SLRTLM
Trigger: CATCAAAGTGCGGAGAGACAAAGATGGTCCTGGGAG...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAAGGGAGGAGAATCACTaGAACCTGGAGGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELREENH*NLEGRG
Trigger: ACCTCTGCCCTCCAGGTTCAAGTGATTCTCCTCCCT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS TCA 90 bp TGTCTGGCTTTGAGGACCACCACTGTCATTCTCTGTGCCACAGGCTaGTATGACAGAGACACCTGGAGCTCCCCTCTGCTGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: CLALRTTTVILCATG*YDRDTWSSPLLMHF
Trigger: GAAGTGCATCAGCAGAGGGGAGCTCCAGGTGTCTCTGTCATATCAGCCTGTGGCACAGAGAATGACAGTGGTGGTCCTCAAAGCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS TCA 90 bp CTCTGGTCTTCACCCGATGCCGTTTGTCAGGAAGGATGGTCATTTTaGTGTAGGGGTCAGATCCCTGGGTCTGGTCATCCATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LWSSPDAVCQEGWSF*CRGQIPGSGHPSLA
Trigger: TGCCAGTGATGGATGACCAGACCCAGGGATCTGACCCCTACATCAAAATGACCATCCTTCCTGACAAACGGCATCGGGTGAAGACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTATGTTTTCCCAGACGTTaGTCAGGAGGAGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELCFPRR*SGGATE
Trigger: CTCTGTAGCTCCTCCTGACAAACGTCTGGGAAAACA...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTGGCCCCCTGGGATCTTaGTCTCGGCTTAGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGGPLGS*SRLSRP
Trigger: TGGCCTGCTAAGCCGAGACAAAGATCCCAGGGGGCC...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTCTGGTCAGTTGTACCTaGCCTGTGCTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGLVSCT*PVLGST
Trigger: GGTGGACCCCAGCACAGGCAAGGTACAACTGACCAG...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CAGAACAACTGGTTCCTCCCCTGTCACCTCAGCACCCACTGCTCAGTAGACCCATTCTGGATATTCCTTTaGATGATGTCCCTGGTCAGT +
Preference number: 5 (lower is better)
Translates to: QNNWFLPCHLSTHCSVDPFWIFL*MMSLVS
Trigger: ACTGACCAGGGACATCATCAAAAGGAATATCCAGAA...TGGGTCTACTGAGCAGTGGGTGCTGAGGTGACAGGGGAGGAACCAGTTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTACACTTGGCCACAGGCTaGCGGGGGCTCTCGCAGACC +
Preference number: 5 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLHLATG*RGLSQT
Trigger: GGTCTGCGAGAGCCCCCGCAAGCCTGTGGCCAAGTG...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS GCA 90 bp AGGTCGGATATTGGTGATCTCAGCCATGTCGTAATCAGAGGCTGTTaGTATAACGTTTTTGCAATGGTGAGACAGCTCTGGGAACCCTCG +
Preference number: 5 (lower is better)
Translates to: RSDIGDLSHVVIRGC*YNVFAMVRQLWEPS
Trigger: CGAGGGTTCCCAGAGCTGTCTCACCATTGCAAAAACGTTATAGCAACAGCCTCTGATTACGACATGGCTGAGATCACCAATATCCGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTCATGGGCCTCCTGGATaGTCACCACCAGGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGHGPPG*SPPGLF
Trigger: AAAAAGCCCTGGTGGTGACAATCCAGGAGGCCCATG...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCGGCAAGTGTCTGGCTTaGAGGACCACCACTGTCATT +
Preference number: 5 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSGKCLA*RTTTVI
Trigger: AATGACAGTGGTGGTCCTCAAAGCCAGACACTTGCC...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCGCACTGTCCGCCTCTTaGCCTTTTTCTGGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSALSAS*PFSGKD
Trigger: GTCTTTGCCAGAAAAAGGCAAAGAGGCGGACAGTGC...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCGTTGAGATCTCACCATaGCACTCCAGCCCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RKTKASVILQTSDDFQPIVEISP*HSSPGN
Trigger: GTTGCCCGGGCTGGAGTGCAATGGTGAGATCTCAAC...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAATCTGCAACTTGATATaGGCAGTTAGGCTAATTTCT +
Preference number: 5 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELICNLI*AVRLIS
Trigger: AGAAATTAGCCTAACTGCCAATATCAAGTTGCAGAT...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GAGAGAGGAGAGTGGGGTGAGGCTGTTTTCCCAGACGTTTGTCAGGAGGAGCTAGAATCAGTCTTTATTTaGCACTTGTGTGGTGCATTA +
Preference number: 5 (lower is better)
Translates to: ERGEWGEAVFPDVCQEELESVFI*HLCGAL
Trigger: TAATGCACCACACAAGTGCAAAATAAAGACTGATTC...TAGCTCCTCCTGACAAACGTCTGGGAAAACAGCCTCACCCCACTCTCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS TCA 90 bp TTGTTGCTGAGGGTCTCTGGGTATATGCTGATGCCTTTGAGCATGTaGATAAACTTGTATGGTGGGTTCTTCTGCTTCTTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLLRVSGYMLMPLSM*INLYGGFFCFFSAC
Trigger: GCAGGCAGAGAAGAAGCAGAAGAACCCACCATACAAGTTTATTCACATGCTCAAAGGCATCAGCATATACCCAGAGACCCTCAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTAAGCTAGGTCGGATATaGGTGATCTCAGCCATGTCG +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGKLGRI*VISAMS
Trigger: CGACATGGCTGAGATCACCAATATCCGACCTAGCTT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATTCACCCGATGCCGTTaGTCAGGAAGGATGGTCATT +
Preference number: 5 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGFTRCR*SGRMVI
Trigger: AATGACCATCCTTCCTGACAAACGGCATCGGGTGAA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAAACATGGGTTTTCTTCTaGGCAATGCGCTTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: PTPFAKARLKVMFFYGSETWVFF*AMRFLP
Trigger: CGGCAGAAAGCGCATTGCCAAGAAGAAAACCCATGT...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTACCCACCACCTCATTCTaGGTGGTGCGATCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLPTTSF*VVRSKS
Trigger: CGACTTCGATCGCACCACCAAGAATGAGGTGGTGGG...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCAGAGGTTGCAGTGAGTaGAGATCTCACCATTGCACT +
Preference number: 5 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSRGCSE*RSHHCT
Trigger: AGTGCAATGGTGAGATCTCAACTCACTGCAACCTCT...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTCCCCACCTTTGTTTCTaGGCTTACTGCAGACCTCTA +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGPHLCF*AYCRPL
Trigger: TAGAGGTCTGCAGTAAGCCAAGAAACAAAGGTGGGG...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CCGACTCCCTTCGCCAAAGCAAGGTTAAAAGTGATGTTCTTCTATGGAAGTGAATCATCCACCCCACCTTaGTTTCTTGGCTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: PTPFAKARLKVMFFYGSESSTPP*FLGLLQ
Trigger: CTGCAGTAAGCCAAGAAACAAAGGTGGGGTGGATGA...TTCACTTCCATAGAAGAACATCACTTTTAACCTTGCTTTGGCGAAGGGAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTCTGTTAAGCAACAGCTaGACTGAGTTCCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGLLSNS*TEFLLR
Trigger: CCTGAGGAGGAACTCAGTCAAGCTGTTGCTTAACAG...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GCTCTGCATTGTCAAGAACATGGGCTGAAATCAAACAAAAGGTTTAGGGGGAGCTTGATGATTTTCTTCTaGTTGCTGAGGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ALHCQEHGLKSNKRFRGSLMIFF*LLRVSG
Trigger: CCCAGAGACCCTCAGCAACAAGAAGAAAATCATCAA...GCTCCCCCTAAACCTTTTGTTTGATTTCAGCCCATGTTCTTGACAATGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGAAGAAAGACAACCACTTaGGAGAGGGATCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGRKTTT*ERDHGE
Trigger: CTCACCATGATCCCTCTCCAAAGTGGTTGTCTTTCT...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TGTTCTTCTATGGAAGTGAACACTTCAGTCTCAACTAACCTTTCACGCCCTGGATGTGACTGCTCAGAATaGCTCTGCATTGTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: CSSMEVNTSVSTNLSRPGCDCSE*LCIVKN
Trigger: GTTCTTGACAATGCAGAGCAATTCTGAGCAGTCACA...TCCAGGGCGTGAAAGGTTAGTTGAGACTGAAGTGTTCACTTCCATAGAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp GTTTACCTATTATCCATGGAGTCTGTGCCATCTGCAAAGTCTCAACGTTGGAGATTGGTAGAAGAAGAATaGCATCCTGTAGTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VYLLSMESVPSAKSQRWRLVEEE*HPVVPP
Trigger: TGGAGGAACTACAGGATGCAATTCTTCTTCTACCAA...TCTCCAACGTTGAGACTTTGCAGATGGCACAGACTCCATGGATAATAGGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp AGAAAAACAAAGGCCAGTGTAATTCTTCAAACCTCTGATGACTTCCAACCCATCCTCTCTCAACCTCTATaGCCCATTGGTAGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: RKTKASVILQTSDDFQPILSQPL*PIGRRR
Trigger: TCTTCTTCTACCAATGGGCAATAGAGGTTGAGAGAG...GATGGGTTGGAAGTCATCAGAGGTTTGAAGAATTACACTGGCCTTTGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTACATTTCATGGGGTATAGGACAGAGACTAGTGGTATGACCCCAACTGATGGTACCTGTTGTTTTGCATaGTTTCTGGGAAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: LHFMGYRTETSGMTPTDGTCCFA*FLGRKQ
Trigger: TTGTTTCCTTCCCAGAAACAATGCAAAACAACAGGT...ACCATCAGTTGGGGTCATACCACTAGTCTCTGTCCTATACCCCATGAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp TTGACTGAGTTCCTCCTCAGGTGGGCAAAAATATCTACTGCCTATCCAAGTTTATTGTCTCTCCGCACTTaGATGATTTTCTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTEFLLRWAKISTAYPSLLSLRT*MIFFLL
Trigger: CAACAAGAAGAAAATCATCAAAGTGCGGAGAGACAA...TAAACTTGGATAGGCAGTAGATATTTTTGCCCACCTGAGGAGGAACTCAGTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS-3UTR CAA 90 bp CAAGTTCTGATGTCTTGGATGCATAAGTCTGATGTATTCTCTGTGCTTCAGTTAAACCTCTATTGCCCATaGGTAGAAGAAGAATTGCAT +
Preference number: 5 (lower is better)
Translates to: QVLMSWMHKSDVFSVLQLNLYCP*VEEELH
Trigger: ATGCAATTCTTCTTCTACCAATGGGCAATAGAGGTT...TAACTGAAGCACAGAGAATACATCAGACTTATGCATCCAAGACATCAGAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS GCA 72 bp GTCAGGGAAGGGGGAAGGTATCCAGCGGACGCCTCCTaGGACGGTCCGGCCCCTAGTTGTCAGCTGCGCTCA +
Preference number: 6 (lower is better)
Translates to: VREGGRYPADAS*DGPAPSCQLRS
Trigger: TGAGCGCAGCTGACAACTAGGGGCCGGACCGTCGCAGGAGGCGTCCGCTGGATACCTTCCCCCTTCCCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CCA 72 bp GTAGGGGTCAGATCCCTGGGTCTGGTCATCCATCACTaGCAGCCCATGGGCCTCCTGGATTGTCACCACCAG +
Preference number: 6 (lower is better)
Translates to: VGVRSLGLVIHH*QPMGLLDCHHQ
Trigger: CTGGTGGTGACAATCCAGGAGGCCCATGGGCTGCCAGTGATGGATGACCAGACCCAGGGATCTGACCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CCA 72 bp TTGTACCTTGCCTGTGCTGGGGTCCACCCCTGCCAGTaGCACCATGACCTCGCCAATGACATCATCCCGAGA +
Preference number: 6 (lower is better)
Translates to: LYLACAGVHPCQ*HHDLANDIIPR
Trigger: TCTCGGGATGATGTCATTGGCGAGGTCATGGTGCCACTGGCAGGGGTGGACCCCAGCACAGGCAAGGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS TCA 72 bp GGTCCTGCAGCTGGCTGTAGGGGATGCCATAGAAGGTaGAGGTCTCGTCAAACACAGGGTCCAGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: GPAAGCRGCHRR*RSRQTQGPGSS
Trigger: GGAAGACCCTGGACCCTGTGTTTGACGAGACCTTCACCTTCTATGGCATCCCCTACAGCCAGCTGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CCA 72 bp AAGAACAGGATTAGTACTCGCTCAGACTGTGCCACTTaGCCACAGGCTTGCGGGGGCTCTCGCAGACCTCTC +
Preference number: 6 (lower is better)
Translates to: KNRISTRSDCAT*PQACGGSRRPL
Trigger: GAGAGGTCTGCGAGAGCCCCCGCAAGCCTGTGGCCAAGTGGCACAGTCTGAGCGAGTACTAATCCTGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CAA 72 bp TCTATACAAGATCCAGAGCTAGGCCCCCTGGGATCTTaGTCTCGGCTTAGCAGGCCAGCCTCTGCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: SIQDPELGPLGS*SRLSRPASAAS
Trigger: GGACGCAGCAGAGGCTGGCCTGCTAAGCCGAGACAAAGATCCCAGGGGGCCTAGCTCTGGATCTTGTATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CAA 90 bp GGTAATTGGTCTATACAAGATCCAGAGCTAGGCCCCCTGGGATCTTaGTCTCGGCTTAGCAGGCCAGCCTCTGCTGCGTCCACCAACAGG +
Preference number: 6 (lower is better)
Translates to: GNWSIQDPELGPLGS*SRLSRPASAASTNR
Trigger: CCTGTTGGTGGACGCAGCAGAGGCTGGCCTGCTAAGCCGAGACAAAGATCCCAGGGGGCCTAGCTCTGGATCTTGTATAGACCAATTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS TCA 72 bp TCACCCGATGCCGTTTGTCAGGAAGGATGGTCATTTTaGTGTAGGGGTCAGATCCCTGGGTCTGGTCATCCA +
Preference number: 6 (lower is better)
Translates to: SPDAVCQEGWSF*CRGQIPGSGHP
Trigger: TGGATGACCAGACCCAGGGATCTGACCCCTACATCAAAATGACCATCCTTCCTGACAAACGGCATCGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS GCA 72 bp AACTTGTATGGTGGGTTCTTCTGCTTCTTCTCTGCCTaGTGGTGGCAGCATGACCAGACAAAGACGGTCACC +
Preference number: 6 (lower is better)
Translates to: NLYGGFFCFFSA*WWQHDQTKTVT
Trigger: GGTGACCGTCTTTGTCTGGTCATGCTGCCACCAGCAGGCAGAGAAGAAGCAGAAGAACCCACCATACAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CCA 72 bp TGTTGCTATAACGTTTTTGCAATGGTGAGACAGCTCTaGGAACCCTCGGTCAGTACCGAGGCAGCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: CCYNVFAMVRQL*EPSVSTEAAAV
Trigger: TACAGCTGCTGCCTCGGTACTGACCGAGGGTTCCCAGAGCTGTCTCACCATTGCAAAAACGTTATAGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CAA 90 bp CTCCCAGGACCATCTTTGTCTCTCCGCACTTTGATGATTTTCTTCTaGTTGCTGAGGGTCTCTGGGTATATGCTGATGCCTTTGAGCATG +
Preference number: 6 (lower is better)
Translates to: LPGPSLSLRTLMIFF*LLRVSGYMLMPLSM
Trigger: CATGCTCAAAGGCATCAGCATATACCCAGAGACCCTCAGCAACAAGAAGAAAATCATCAAAGTGCGGAGAGACAAAGATGGTCCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS GCA 72 bp ATTGGTGATCTCAGCCATGTCGTAATCAGAGGCTGTTaGTATAACGTTTTTGCAATGGTGAGACAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: IGDLSHVVIRGC*YNVFAMVRQLW
Trigger: CCAGAGCTGTCTCACCATTGCAAAAACGTTATAGCAACAGCCTCTGATTACGACATGGCTGAGATCACCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368324.5
CDS CAA 72 bp CCATCTTTGTCTCTCCGCACTTTGATGATTTTCTTCTaGTTGCTGAGGGTCTCTGGGTATATGCTGATGCCT +
Preference number: 6 (lower is better)
Translates to: PSLSLRTLMIFF*LLRVSGYMLMP
Trigger: AGGCATCAGCATATACCCAGAGACCCTCAGCAACAAGAAGAAAATCATCAAAGTGCGGAGAGACAAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368324.5