RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYP (Homo sapiens)

Ensembl gene IDs: ENSG00000102003

Ensembl transcript IDs: ENST00000263233.9, ENST00000376303.6, ENST00000466635.1, ENST00000469389.5, ENST00000472598.5, ENST00000472737.1, ENST00000479808.5, ENST00000494396.5

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCGTAGCCTTGCTGCCCATAGTCGCCCTGAGGCCCGTAGCCACTaGCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGC +
Preference number: 1 (lower is better)
Translates to: GRSLAAHSRPEARSH*HRCRLVDHSQAGSR
Trigger: GCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGCGACTATGGGCAGCAAGGCTACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CCA 90 bp CCCATAGTCGCCCTGAGGCCCGTAGCCACTGCCACCGCTGCCGGCTaGTTGACCATAGTCAGGCTGGTAGCCGCCCTGAGGCCCGTAGGA +
Preference number: 1 (lower is better)
Translates to: PIVALRPVATATAAG*LTIVRLVAALRPVG
Trigger: TCCTACGGGCCTCAGGGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGCGACTATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR TCA 90 bp CAAGGCCAGAGTTGGGAGGAGTGGAGGGAGAGAGAGGAGAGAGTCTaGAGTCACGCCCACCCTCCCCACACAGCCGAGGTCTGTTCCCTC +
Preference number: 1 (lower is better)
Translates to: QGQSWEEWREREERV*SHAHPPHTAEVCSL
Trigger: GAGGGAACAGACCTCGGCTGTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCCTCCCAACTCTGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR GCA 90 bp TGGGCTTCACTGACCAGACTACATCTGATTGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCCTTGCTGCCCATAGTCGCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: WASLTRLHLIGEGGG*TLRAVALLPIVALR
Trigger: CCTCAGGGCGACTATGGGCAGCAAGGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAGTGAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR GCA 90 bp TTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTaGAGCCCCTTCGCTGGAACAGAGCCAGAGGGCCACAGCCTATGT +
Preference number: 1 (lower is better)
Translates to: LVVPPRQVGASKYTW*SPFAGTEPEGHSLC
Trigger: ACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR GCA 90 bp GCAGCCCCTTCGCTGGAACAGAGCCAGAGGGCCACAGCCTATGTCTaGCTTGCTCACCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGT +
Preference number: 1 (lower is better)
Translates to: AAPSLEQSQRATAYV*LAHHIVLESRAVPG
Trigger: ACCTGGCACTGCTCTGGACTCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR GCA 90 bp CCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCGCTGATTCGCCACTaGGCAAGTCCCCCGATATTCCCTCCCTTTATTGGTTGCTCTGCT +
Preference number: 1 (lower is better)
Translates to: PPRRFRGSCAPLIRH*ASPPIFPPFIGCSA
Trigger: AGCAGAGCAACCAATAAAGGGAGGGAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 90 bp TCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTaGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACC +
Preference number: 1 (lower is better)
Translates to: SAGGCIKVHLVQPLR*NRARGPQPMSALLT
Trigger: GGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR TCA 90 bp TCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCGCTaGTTCGCCACTGCGCAAGTCCCCCGATATTCCCTCCCTTTATTG +
Preference number: 1 (lower is better)
Translates to: SKTHLLVASVALALR*FATAQVPRYSLPLL
Trigger: CAATAAAGGGAGGGAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR TCA 90 bp AGCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTaGGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCACCA +
Preference number: 1 (lower is better)
Translates to: SVGERRQIYPLLPDW*ARLTFKIHAHLPSP
Trigger: TGGTGAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 90 bp TTGGCTTATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTaGCTCTTGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCCGAT +
Preference number: 1 (lower is better)
Translates to: LAYQSLLRPTSSSLP*LLRSADSPLRKSPD
Trigger: ATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATAAGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR GCA 90 bp CCCTTCGCTGGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTaGTCACCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTACAAG +
Preference number: 1 (lower is better)
Translates to: PFAGTEPEGHSLCLP*SPHSPRVQSSARYK
Trigger: CTTGTACCTGGCACTGCTCTGGACTCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR GCA 90 bp TTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTaGAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTACAAGG +
Preference number: 1 (lower is better)
Translates to: LVVPPRQVGASKYTW*SHIVLESRAVPGTR
Trigger: CCTTGTACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR GCA 90 bp ATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: IRLTRSSPQLRRPWW*PLGRWVHQSTLGAA
Trigger: GGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR CCA 90 bp CATCACGGGAGTGGGGAAGGGTGTGTGTGGTGGGGTGCTTCTCTCTaGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCT +
Preference number: 1 (lower is better)
Translates to: HHGSGEGCVWWGASL*IPRLTLQAISLDSS
Trigger: AGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAAGCACCCCACCACACACACCCTTCCCCACTCCCGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp ACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTaGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTACA +
Preference number: 1 (lower is better)
Translates to: TLVVPPRQVGASKYT*CSHIVLESRAVPGT
Trigger: TGTACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR TCA 90 bp AGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTaGCCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCC +
Preference number: 1 (lower is better)
Translates to: RGGRSIPSSRIGELV*PSRSTPIYPHHLLA
Trigger: GGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR GCA 90 bp CTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGGGGTaGTTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACT +
Preference number: 1 (lower is better)
Translates to: LAVSSREWGRVCVVG*FSLDPTPHPTSHIT
Trigger: AGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAAGCACCCCACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp CCCGAGGTCACAGGGTCTCTCAGCTCCTTGCATGTGTTCCCTGTCTaGCGGCAGACAGGCATCTCCTTGATAATGTTCTCTGGGTCTGTG +
Preference number: 1 (lower is better)
Translates to: PEVTGSLSSLHVFPV*RQTGISLIMFSGSV
Trigger: CACAGACCCAGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR TCA 90 bp GGGCCACAGCCAGACAAAATGGCAACACACGATCACAGGCACTACTaGCATCACAGACATAGCAGAGGGTGCAGGATAGGGGCTCCAGAC +
Preference number: 1 (lower is better)
Translates to: GPQPDKMATHDHRHY*HHRHSRGCRIGAPD
Trigger: GTCTGGAGCCCCTATCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTCTGGCTGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp CATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTaGCCCATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTC +
Preference number: 1 (lower is better)
Translates to: HGSPILSPTLSGTLA*PIPESHFLPCSRSV
Trigger: GACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAATGGGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp CGTTGGTTCTGTCCTCCTATTAACCTAGCTGTTTCATCACGGGAGTaGGGAAGGGTGTGTGTGGTGGGGTGCTTCTCTCTGGATCCCACG +
Preference number: 1 (lower is better)
Translates to: RWFCPPINLAVSSRE*GRVCVVGCFSLDPT
Trigger: CGTGGGATCCAGAGAGAAGCACCCCACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGGACAGAACCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp AGAATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCA +
Preference number: 1 (lower is better)
Translates to: RIRLTRSSPQLRRPW*CPLGRWVHQSTLGA
Trigger: TGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR CCA 90 bp GCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTaGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGC +
Preference number: 1 (lower is better)
Translates to: AQSPKCSKPHPFHRL*YQSKTHLLWSPPFC
Trigger: GCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 90 bp CAAAGAATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGT +
Preference number: 1 (lower is better)
Translates to: QRIRLTRSSPQLRRP*WCPLGRWVHQSTLG
Trigger: ACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAATTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR GCA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTaGCCCAGTAAACGCCTTACGTACTCTCTACCCCTGACTCTTATT +
Preference number: 1 (lower is better)
Translates to: VVLPLDWLLQTSVLT*PSKRLTYSLPLTLI
Trigger: AATAAGAGTCAGGGGTAGAGAGTACGTAAGGCGTTTACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR TCA 90 bp GGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCACACCACCGAGGTGTTaGGTCCCGAGGTCACAGGGT +
Preference number: 2 (lower is better)
Translates to: GARTRRGPARSLHRRRRPTPPRC*VPRSQG
Trigger: ACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGT...GGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp CATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGAGGCGCTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: HRRRRPRVPVVSRGRREALRRPW*CPLGRW
Trigger: CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG...CGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp GTAGCCGCCCTGAGGCCCGTAGGAATCCTGGGGCCCGTACCCGCCGGGGCCCTGAGGCGAACACAGCCGTaGCCAGAAAGTCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: VAALRPVGILGPVPAGALRRTQP*PESPAW
Trigger: CCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCT...CAGGGCCCCGGCGGGTACGGGCCCCAGGATTCCTACGGGCCTCAGGGCGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp GGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTGGCCATCTTCACATCTaGCAGCCCCTTGGCCCATGC +
Preference number: 2 (lower is better)
Translates to: GALPVACIAVGVPGCRLFGHLHI*QPLGPC
Trigger: GCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCC...AAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR GCA 90 bp CGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTACACGAACCACAGGTTaGCGACCCAGAGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: RGPARSLHRRRRPRVPVVTRTTG*RPRAPG
Trigger: ACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGT...AACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR GCA 90 bp AGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGGTCTCTCAGCTCCTTaGATGTGTTCCCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: SLHRRRRPRVPVVSRGRRGLSAP*MCSLSG
Trigger: GCCAGACAGGGAACACATGCAAGGAGCTGAGAGACC...CCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp AGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGTGGCCAGAGCCCCCATaGAGTAGAGGAAGGCAAACA +
Preference number: 2 (lower is better)
Translates to: SLHRRRRPRVPVVSRGRRWPEPP*SRGRQT
Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCTCTGGCCA...CCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CAA 90 bp ATAGTCGCCCTGAGGCCCGTAGCCACTGCCACCGCTGCCGGCTGGTaGACCATAGTCAGGCTGGTAGCCGCCCTGAGGCCCGTAGGAATC +
Preference number: 2 (lower is better)
Translates to: IVALRPVATATAAGW*TIVRLVAALRPVGI
Trigger: GATTCCTACGGGCCTCAGGGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGCGACTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACTCCTTGTACCCTCCTTaGCCGCACCGCTCGCCGGTC +
Preference number: 2 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDSLYPP*PHRSPV
Trigger: GACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGA...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR TCA 90 bp TTGCCCAGGCTGGTCTCGAACTCTTGGGCTCAAGCGGCCCGCCCGCCTCGGTCTATTGGTGAGCTCGTCTaGCCTTCAAGATCCACGCCC +
Preference number: 2 (lower is better)
Translates to: LPRLVSNSWAQAARPPRSIGELV*PSRSTP
Trigger: GGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAAT...AGACCGAGGCGGGCGGGCCGCTTGAGCCCAAGAGTTCGAGACCAGCCTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CCA 90 bp GTAGCCGCCCTGAGGCCCGTAGGAATCCTGGGGCCCGTACCCGCCGGGGCCCTGCTTGATAATGTTCTCTaGGTCTGTGGCCATCTTCAC +
Preference number: 2 (lower is better)
Translates to: VAALRPVGILGPVPAGALLDNVL*VCGHLH
Trigger: GTGAAGATGGCCACAGACCCAGAGAACATTATCAAG...CAGGGCCCCGGCGGGTACGGGCCCCAGGATTCCTACGGGCCTCAGGGCGGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCAGAGAGGAGAGAGTCTaGAGTCACGCCCACCCTCCC +
Preference number: 2 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLAREERV*SHAHPP
Trigger: GGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCT...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR GCA 90 bp TCCTGGGCTTCACTGACCAGACTACATCTGATTGGAGAAGGAGGTGGGTGCACCGCCCTGCCCGTAGCCTaGATCGCCGTAGGCGTCCCC +
Preference number: 2 (lower is better)
Translates to: SWASLTRLHLIGEGGGCTALPVA*IAVGVP
Trigger: GGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGC...GGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAGTGAAGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR GCA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACGCCTTTCCGCCGAGTTaGCCTTCTACCTCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDAFPPS*PSTSLP
Trigger: TGGGAGGGAGGTAGAAGGGCAACTCGGCGGAAAGGC...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 90 bp CTCCAGCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATaGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTC +
Preference number: 2 (lower is better)
Translates to: LQRWGEAADLSPPPG*VSSSDLQDPRPFTL
Trigger: GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR TCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCGCTCTTGCGCTCCGCTaGTTCGCCACTGCGCAAGTC +
Preference number: 2 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLALALR*FATAQV
Trigger: GACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGC...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR GCA 90 bp GCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGGCCACAGCCTATGTCTaGCTTGCTCACCACATAGTC +
Preference number: 2 (lower is better)
Translates to: APSAGGCIKVHLVQPLRWATAYV*LAHHIV
Trigger: GACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGC...CCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR CAA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTaGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCCGATATTCCC +
Preference number: 2 (lower is better)
Translates to: YQSLLRPTSSSLPWL*RSADSPLRKSPDIP
Trigger: GGGAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 90 bp GACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTaGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: DLGGAPSAGGCIKVH*VQPHSPRVQSSARY
Trigger: GTACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR-3UTR GCA 90 bp CTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: LRRPWWCPLGRWVHQSTLRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR-3UTR CCA 90 bp TTGCCCAGGCTGGTCTCGAACTCTTGGGCTCAAGCGGCCCGCCCGCCTCGGTCTACCCTCACCATCTATTaGCCTTATCACCTATTGGCT +
Preference number: 2 (lower is better)
Translates to: LPRLVSNSWAQAARPPRSTLTIY*PYHLLA
Trigger: AGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGT...AGACCGAGGCGGGCGGGCCGCTTGAGCCCAAGAGTTCGAGACCAGCCTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 90 bp ACCACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATA +
Preference number: 2 (lower is better)
Translates to: TTEVLSPEVTGSLSS*HVFPVWRQTGISLI
Trigger: TATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp CCTCCTATTAACCTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGTGGGCACCTAGTGGATaGGGGGAGTGGAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: PPINLAVSSREWGRVCVVWAPSG*GEWSEG
Trigger: GCCCTCACTCCACTCCCCTCATCCACTAGGTGCCCA...CACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR GCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCCCACCCCAGAATaGTCTAGCGCACTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: QAISLDSSQATSVPSRSQSPTPE*SSALLS
Trigger: GGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCT...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR GCA 90 bp GCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGAGCCTATGTCTGCCTTaGTCACCACATAGTCCTAGA +
Preference number: 2 (lower is better)
Translates to: APSAGGCIKVHLVQPLRWSLCLP*SPHSPR
Trigger: TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCT...CCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR-3UTR CCA 90 bp CACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCAGCTCCTTGCATGTGTTCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: HRGVESRGHRVSQLLACVQLRRP*WCPLGR
Trigger: CCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG...AACACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp ATTCCACACTACTTCCCTCCCCTCCAGCGTTGGGGAGAGGCGGCAGATCTATCCCTCTTATTGGTTCACTaGCCCGCTCGTCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: IPHYFPPLQRWGEAADLSLLLVH*PARLLP
Trigger: AGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAG...GGATAGATCTGCCGCCTCTCCCCAACGCTGGAGGGGAGGGAAGTAGTGTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR GCA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCCCGCTGATTCGCCACTaGGCAAGTCCCCCGATATTC +
Preference number: 2 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPIPLIRH*ASPPIF
Trigger: GAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGG...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR TCA 90 bp TCCTTAAACACGAACCACAGGTTGCCGACCCAGAGCACCAGGTTCAGGAAGCCGGACAAAGAATTCGGCTaGCGAGGAGTAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: SLNTNHRLPTQSTRFRKPDKEFG*RGVVPN
Trigger: GTTGGGGACTACTCCTCGTCAGCCGAATTCTTTGTC...CGGCTTCCTGAACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTTTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp TCCTGGGCTTCACTGACCAGACTACATCTGATTGGAGAAGGAGGTGGGTGCACCCAAACACGGCCACGGTaGCAAAGAATTCGGCTGACG +
Preference number: 2 (lower is better)
Translates to: SWASLTRLHLIGEGGGCTQTRPR*QRIRLT
Trigger: CGTCAGCCGAATTCTTTGTCACCGTGGCCGTGTTTG...GGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAGTGAAGCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp TGGATTTCCCTAACGGCCTTTGTTCAGGCAGGCATTGCTGGAGGAACCAAGGCCAAAGACAGGGTCTCCTaGCTTGAGGGGTGGAGACCT +
Preference number: 2 (lower is better)
Translates to: WISLTAFVQAGIAGGTKAKDRVS*LEGWRP
Trigger: AGGTCTCCACCCCTCAAGCCAGGAGACCCTGTCTTT...GGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACAAAGGCCGTTAGGGAAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAACCAAGGCCAGAGTTaGGAGGAGTGGAGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: QAISLDSSQATSVPSRSQNQGQS*EEWRER
Trigger: TCTCTCCCTCCACTCCTCCCAACTCTGGCCTTGGTT...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR GCA 90 bp TTTCTGAAACCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTTGTTCAGGCAGGCATTaGTGGAGGAACCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: FLKPPWKPHSKPHPVWNPCSGRH*WRNQGQ
Trigger: CTGGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACA...AGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR GCA 90 bp ACAGGCATCTCCTTGATAATGTTCTCTGGGTCTGTGGCCATCTTCACATCTGACAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TGISLIMFSGSVAIFTSDRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...GTCAGATGTGAAGATGGCCACAGACCCAGAGAACATTATCAAGGAGATGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp CCTCCTATTAACCTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGAAGACCCACCTACTCTaGAGCCCACCATTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PPINLAVSSREWGRVCVVKTHLL*SPPFCL
Trigger: GAGGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTT...CACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CCA 90 bp TTCAGGAAGCCGAACACCACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCTGTTCTCTGGGTCTGTaGCCATCTTCACATCTGACA +
Preference number: 2 (lower is better)
Translates to: FRKPNTTEVLSPEVTGSLCSLGL*PSSHLT
Trigger: TGTCAGATGTGAAGATGGCCACAGACCCAGAGAACA...GAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTTCGGCTTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CAA 90 bp AGCTCCTTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCTGTGGCCATCTTCACATCTGACAGC +
Preference number: 2 (lower is better)
Translates to: SSLHVFPVWRQTGIS*IMFSGSVAIFTSDS
Trigger: GCTGTCAGATGTGAAGATGGCCACAGACCCAGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR TCA 90 bp TTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCTCAGGCTTGGCCCATTCCTaGATCCCACTTCTTGCCTTG +
Preference number: 2 (lower is better)
Translates to: FSLDPTPHPTSHITRLFSGLAHS*IPLLAL
Trigger: CAAGGCAAGAAGTGGGATTCAGGAATGGGCCAAGCC...TGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CAA 90 bp ATAATGTTCTCTGGGTCTGTGGCCATCTTCACATCTGACAGCCCCTaGGCCCATGCCGATGAGCTAACTAGCCACATGAAGGCGAACACA +
Preference number: 2 (lower is better)
Translates to: IMFSGSVAIFTSDSP*AHADELTSHMKANT
Trigger: TGTGTTCGCCTTCATGTGGCTAGTTAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACAGACCCAGAGAACATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR GCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGCTGAATCCCACTTCTTaGCTTGCTCAAGATCTGTCC +
Preference number: 2 (lower is better)
Translates to: QAISLDSSQATSVPSRSQLNPTS*LAQDLS
Trigger: GGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAG...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTCCTCGTCGCTTCCGTaGCTCTTGCGCTCCGCTGAT +
Preference number: 2 (lower is better)
Translates to: AHLPSPSIGLITYWLISHSSSLP*LLRSAD
Trigger: ATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGA...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 90 bp GATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATaGGCTTATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCG +
Preference number: 2 (lower is better)
Translates to: DPRPFTLTIYWPYHL*AYQSLLRPTSSSLP
Trigger: CGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR TCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCTCATTCTGTCCATCTTaGAGCACCATTCTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLSFCPS*STILLF
Trigger: GAAAAGAAGAATGGTGCTTCAAGATGGACAGAATGA...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CCA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTGCCCCAGTACCCCTGACTCTTATTaGTTCACTGACCCGCTCGTC +
Preference number: 2 (lower is better)
Translates to: VVLPLDWLLQTSVLTCPSTPDSY*FTDPLV
Trigger: GACGAGCGGGTCAGTGAACCAATAAGAGTCAGGGGT...ACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CCA 90 bp TTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATAATGTTCTCTCCAGAAAGTCCAGCATaGGCCCTTTGTTATTCTCTC +
Preference number: 2 (lower is better)
Translates to: LHVFPVWRQTGISLIMFSPESPA*ALCYSL
Trigger: GAGAGAATAACAAAGGGCCCATGCTGGACTTTCTGG...AGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTCTACCTCCCTCCCATTaGCTCTTCATTCTGTCCATC +
Preference number: 2 (lower is better)
Translates to: PSRSTPIYPHHLLALSPILPPSH*LFILSI
Trigger: GATGGACAGAATGAAGAGCCAATGGGAGGGAGGTAG...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CCA 90 bp ATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCCTTTCCATAGGCTCTaGTACCAATCCAAGACCCAC +
Preference number: 2 (lower is better)
Translates to: IPESHFLPCSRSVPFRIKPFHRL*YQSKTH
Trigger: GTGGGTCTTGGATTGGTACCAGAGCCTATGGAAAGG...CTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CCA 90 bp ACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCATTCCCTCCCTTTATTaGTTGCTCTGCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: TPIYPHHLLALSPIGLSVIPSLY*LLCFSP
Trigger: GGGAGAGAAGCAGAGCAACCAATAAAGGGAGGGAAT...GACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR GCA 72 bp CTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTaGCGGTTGTTTCTCGGGGGCGCCGGGAGGCGCGCG +
Preference number: 3 (lower is better)
Translates to: LPVACIAVGVPG*RLFLGGAGRRA
Trigger: CGCGCGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CAA 90 bp GGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCACATCTGACAGCCCCTaGGCCCATGCCGATGAGCTA +
Preference number: 3 (lower is better)
Translates to: GARTRRGPARSLHRRRRPTSDSP*AHADEL
Trigger: TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGT...GGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CCA 72 bp GCCCTGAGGCCCGTAGCCACTGCCACCGCTGCCGGCTaGTTGACCATAGTCAGGCTGGTAGCCGCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: ALRPVATATAAG*LTIVRLVAALR
Trigger: CCTCAGGGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR GCA 72 bp CATAGTCGCCCTGAGGCCCGTAGCCACTGCCACCGCTaGCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGC +
Preference number: 3 (lower is better)
Translates to: HSRPEARSHCHR*RLVDHSQAGSR
Trigger: GCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGCGACTATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CAA 90 bp GCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCCCTGAACACCACCGAGGTGTaGAGTCCCGAGGTCACAGGG +
Preference number: 3 (lower is better)
Translates to: ATATAAGWLTIVRLVAALNTTEV*SPEVTG
Trigger: CCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTT...CAGGGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR GCA 72 bp CTTGCTGCCCATAGTCGCCCTGAGGCCCGTAGCCACTaGCACCGCTGCCGGCTGGTTGACCATAGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: LAAHSRPEARSH*HRCRLVDHSQA
Trigger: AGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAGGGCGACTATGGGCAGCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CAA 90 bp AGGCCCGTAGGAATCCTGGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: RPVGILGPVPAGALPVACQTGIS*IMFSGS
Trigger: AGACCCAGAGAACATTATCAAGGAGATGCCTGTCTG...GCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCCAGGATTCCTACGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR TCA 72 bp CACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCGCTaGTTCGCCACTGCGCAAGTCCCCCGATATTCCCTC +
Preference number: 3 (lower is better)
Translates to: HLLVASVALALR*FATAQVPRYSL
Trigger: GAGGGAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR GCA 72 bp CCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTaGAGCCCCTTCGCTGGAACAGAGCCAGAGGGCCAC +
Preference number: 3 (lower is better)
Translates to: PPRQVGASKYTW*SPFAGTEPEGH
Trigger: GTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR CCA 72 bp GTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTaGTGCAGCCCCTTCGCTGGAACAGAGCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: VPPRQVGASKYT*CSPFAGTEPEG
Trigger: GCCCTCTGGCTCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR-3UTR CAA 90 bp CGTAGCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: RSHCHRCRLVDHSQAGSRGSLSS*HVFPVW
Trigger: CCAGACAGGGAACACATGCAAGGAGCTGAGAGACCC...GCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR TCA 72 bp AGTTGGGAGGAGTGGAGGGAGAGAGAGGAGAGAGTCTaGAGTCACGCCCACCCTCCCCACACAGCCGAGGTC +
Preference number: 3 (lower is better)
Translates to: SWEEWREREERV*SHAHPPHTAEV
Trigger: GACCTCGGCTGTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCCTCCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR GCA 72 bp CCTGCCCTCAGCGCCCTTCCAAGCCCCACCCCAGAATaGTCTAGCGCACTCCTCTCCTTCAGACTCCAGATC +
Preference number: 3 (lower is better)
Translates to: PALSALPSPTPE*SSALLSFRLQI
Trigger: GATCTGGAGTCTGAAGGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCTTGGAAGGGCGCTGAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CAA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCCGCCTTTCCGCCGAGTaGCCCTTCTACCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: YQSLLRPTSSSLPWLLRSRLSAE*PFYLPP
Trigger: GGGAGGGAGGTAGAAGGGCAACTCGGCGGAAAGGCG...GGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 72 bp GTCCTCCTGGGCTTCACTGACCAGACTACATCTGATTaGAGAAGGAGGTGGGTGCACCCTGCGGGCCGTAGC +
Preference number: 3 (lower is better)
Translates to: VLLGFTDQTTSD*RRRWVHPAGRS
Trigger: GCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAGTGAAGCCCAGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CCA 72 bp CAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTaGCTCTTGCGCTCCGCTGATTCGCCACTGCGCAAG +
Preference number: 3 (lower is better)
Translates to: QSLLRPTSSSLP*LLRSADSPLRK
Trigger: CTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CAA 90 bp AGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCACCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: RPWWCPLGRWVHQSTLGAPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...TGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR-3UTR CAA 90 bp ACTTCTCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCTTCCTTGTACCCTCCTaGGCCGCACCGCTCGCCGGT +
Preference number: 3 (lower is better)
Translates to: TSLLRPSKKAGKPFQDPTFLVPS*AAPLAG
Trigger: ACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAA...GGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR GCA 72 bp CTGACCAGACTACATCTGATTGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCCTTGCTGCCCATAGTC +
Preference number: 3 (lower is better)
Translates to: LTRLHLIGEGGG*TLRAVALLPIV
Trigger: GACTATGGGCAGCAAGGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR GCA 72 bp CGCTTCCGTGGCTCTTGCGCTCCGCTGATTCGCCACTaGGCAAGTCCCCCGATATTCCCTCCCTTTATTGGT +
Preference number: 3 (lower is better)
Translates to: RFRGSCAPLIRH*ASPPIFPPFIG
Trigger: ACCAATAAAGGGAGGGAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 72 bp CGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGT +
Preference number: 3 (lower is better)
Translates to: RLTRSSPQLRRP*WCPLGRWVHQS
Trigger: ACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR-3UTR CAA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCACAGGGTCTCCTGGCTaGAGGGGTGGAGACCTAGGG +
Preference number: 3 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSATGSPG*RGGDLG
Trigger: CCCTAGGTCTCCACCCCTCAAGCCAGGAGACCCTGT...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CAA 90 bp ACTTCTCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCGCTCGTCTCCTTCCTaGTACCCTCCTTGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: TSLLRPSKKAGKPFQDPTRSSPS*YPPWPH
Trigger: GTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCG...GGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CAA 90 bp TCCTGGGCTTCACTGACCAGACTACATCTGATTGGAGAAGGAGGTGGGTGCACCAACACGAACCACAGGTaGCCGACCCAGAGCACCAGG +
Preference number: 3 (lower is better)
Translates to: SWASLTRLHLIGEGGGCTNTNHR*PTQSTR
Trigger: CCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTT...GGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTCAGTGAAGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR GCA 72 bp GGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTaGTCACCACATAGTCCTAGAGTCCAGAGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: GTEPEGHSLCLP*SPHSPRVQSSA
Trigger: GGCACTGCTCTGGACTCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR GCA 72 bp CCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTaGAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCA +
Preference number: 3 (lower is better)
Translates to: PPRQVGASKYTW*SHIVLESRAVP
Trigger: TGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR CCA 72 bp GTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTaGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: VPPRQVGASKYT*CSHIVLESRAV
Trigger: CACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR TCA 72 bp GAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTaGGCTCGTCTGACCTTCAAGATCCACGCCCATTTA +
Preference number: 3 (lower is better)
Translates to: ERRQIYPLLPDW*ARLTFKIHAHL
Trigger: TAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 72 bp CCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTaGCCCATTCCTGAATCCCACTTCTTGCCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: PILSPTLSGTLA*PIPESHFLPCS
Trigger: TGAGCAAGGCAAGAAGTGGGATTCAGGAATGGGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CCA 72 bp CTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACA +
Preference number: 3 (lower is better)
Translates to: LTRSSPQLRRPW*CPLGRWVHQST
Trigger: TGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR GCA 72 bp TTGGATTTCCCTAACGGCCTTTGTTCAGGCAGGCATTaGTGGAGGAACCAAGGCCAGAGTTGGGAGGAGTGG +
Preference number: 3 (lower is better)
Translates to: LDFPNGLCSGRH*WRNQGQSWEEW
Trigger: CCACTCCTCCCAACTCTGGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACAAAGGCCGTTAGGGAAATCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR GCA 72 bp ACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTGCATCAAAGTACACTT +
Preference number: 3 (lower is better)
Translates to: TRSSPQLRRPWW*PLGRWVHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR CCA 72 bp AGGGGGAAGAGGGGTGGGCCAGTCCCACAGACCCGTTaGTTCTGTCCTCCTATTAACCTAGCTGTTTCATCA +
Preference number: 3 (lower is better)
Translates to: RGKRGGPVPQTR*FCPPINLAVSS
Trigger: TGATGAAACAGCTAGGTTAATAGGAGGACAGAACCAACGGGTCTGTGGGACTGGCCCACCCCTCTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR TCA 72 bp AGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTaGCCTTCAAGATCCACGCCCATTTACCCTCACCAT +
Preference number: 3 (lower is better)
Translates to: RSIPSSRIGELV*PSRSTPIYPHH
Trigger: ATGGTGAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR-3UTR CAA 90 bp CCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTACTCTCCAAGACCACCTaGGGTCCTAAACTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PYKPYHSTLLRPLPSQVVLSKTT*GPKLSS
Trigger: AGAGGACAGTTTAGGACCCAAGGTGGTCTTGGAGAG...TACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CAA 90 bp ACAGGCATCTCCTTGATAATGTTCTCTGGGTCTGTGGCCATCTTCACATCTGACCCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: TGISLIMFSGSVAIFTSDPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...GTCAGATGTGAAGATGGCCACAGACCCAGAGAACATTATCAAGGAGATGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CCA 72 bp ACAGGGTCTCTCAGCTCCTTGCATGTGTTCCCTGTCTaGCGGCAGACAGGCATCTCCTTGATAATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: TGSLSSLHVFPV*RQTGISLIMFS
Trigger: AGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCTGAGAGACCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR-3UTR CAA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGTCTTTAACCCTGGAGTaGGATTTCCCTAACGGCCTT +
Preference number: 3 (lower is better)
Translates to: QAISLDSSQATSVPSRSQSLTLE*DFPNGL
Trigger: AAGGCCGTTAGGGAAATCCAACTCCAGGGTTAAAGA...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR-3UTR CAA 90 bp TTCACATCTGACAGCCCCTTGGCCCATGCCGATGAGCTAACTAGCCACATGAAGTCCAGCATGGGCCCTTaGTTATTCTCTCGGTACTTG +
Preference number: 3 (lower is better)
Translates to: FTSDSPLAHADELTSHMKSSMGP*LFSRYL
Trigger: CAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGA...CTTCATGTGGCTAGTTAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR TCA 72 bp CCAGACAAAATGGCAACACACGATCACAGGCACTACTaGCATCACAGACATAGCAGAGGGTGCAGGATAGGG +
Preference number: 3 (lower is better)
Translates to: PDKMATHDHRHY*HHRHSRGCRIG
Trigger: CCCTATCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTGCCATTTTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR GCA 72 bp CTGGCTTGGCCCATTCCTGAATCCCACTTCTTGCCTTaGTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: LAWPIPESHFLP*SRSVPFRIKLS
Trigger: ACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAATGGGCCAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR GCA 72 bp CCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTaGCCCAGTAAACGCCTTACGTACTCTCTACCCCTG +
Preference number: 3 (lower is better)
Translates to: PLDWLLQTSVLT*PSKRLTYSLPL
Trigger: CAGGGGTAGAGAGTACGTAAGGCGTTTACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR TCA 72 bp CTAGTTTTTCAGCTCTTAGCAGGTAGTTCTGCCTCTTaGTTGGCTCCTTCAAACTTCAGTCCTTACTTGCCC +
Preference number: 3 (lower is better)
Translates to: LVFQLLAGSSAS*LAPSNFSPYLP
Trigger: GGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTACCTGCTAAGAGCTGAAAAACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CCA 72 bp CTTCAAGATCCACGCCCATTTACCCTCACCATCTATTaGCCTTATCACCTATTGGCTTATCAGTCACTTCTA +
Preference number: 3 (lower is better)
Translates to: LQDPRPFTLTIY*PYHLLAYQSLL
Trigger: TAGAAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 72 bp GTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTaGTTTCTCGGGGGCGCCGGGAGGCGCGCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VACIAVGVPGCR*FLGGAGRRAQE
Trigger: TTCCTGCGCGCGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp ATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGAGGCGCAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCC +
Preference number: 4 (lower is better)
Translates to: IAVGVPGCRLFLGGAGRRSRGAP*PPGTDP
Trigger: GGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCT...GCGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp AGGCCCGTAGGAATCCTGGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCGAGGCCCGTAGCCACTaGCACCGCTGCCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RPVGILGPVPAGALPVACEARSH*HRCRLV
Trigger: AACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTC...GCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCCAGGATTCCTACGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp CATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGAGGCGGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: HRRRRPRVPVVSRGRREAGEGGG*TLRAVA
Trigger: GGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCC...CGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp GGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCAGCCACTGCCACCGCTaGCGGCTGGTTGACCATAGT +
Preference number: 4 (lower is better)
Translates to: GARTRRGPARSLHRRRRPSHCHR*RLVDHS
Trigger: ACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCT...GGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp CGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTGCCACCGCTGCCGGCTaGTTGACCATAGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGPARSLHRRRRPRVPVVATAAG*LTIVRL
Trigger: CAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGC...AACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp GTAGCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCCGCCCTGCCCGTAGCCTaGATCGCCGTAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VATATAAGWLTIVRLVAAALPVA*IAVGVP
Trigger: GGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGC...GGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CAA 72 bp CTGAGGCCCGTAGCCACTGCCACCGCTGCCGGCTGGTaGACCATAGTCAGGCTGGTAGCCGCCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRPVATATAAGW*TIVRLVAALRP
Trigger: GGGCCTCAGGGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp ATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGAGGCGCCAAACACGGCCACGGTaGCAAAGAATTCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: IAVGVPGCRLFLGGAGRRQTRPR*QRIRLT
Trigger: CGTCAGCCGAATTCTTTGTCACCGTGGCCGTGTTTG...GCGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp CGTAGCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCGTAGGCGTCCCCGGGTaGCGGTTGTTTCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSHCHRCRLVDHSQAGSRVGVPG*RLFLGG
Trigger: GCCCCCGAGAAACAACCGGCACCCGGGGACGCCTAC...GCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp TCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGGTAGGCGTCCCCGGGTaGCGGTTGTTTCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLTRSSPSLYPPWPHRSPVGVPG*RLFLGG
Trigger: GCCCCCGAGAAACAACCGGCACCCGGGGACGCCTAC...CGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTCATGTGTTCCCTGTCTaGCGGCAGACAGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGPARSLHRRRRPRVPVVHVFPV*RQTGIS
Trigger: GGAGATGCCTGTCTGCCGCCAGACAGGGAACACATG...AACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp CCCTCAGCGCCCTTCCAAGCCCCACCCCAGAATGCTCTAGCGCACTCCTCTCCTAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCC +
Preference number: 4 (lower is better)
Translates to: PSAPFQAPPQNALAHSSPSRGAP*PPGTDP
Trigger: GGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCT...AGGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCTTGGAAGGGCGCTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp GCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCC +
Preference number: 4 (lower is better)
Translates to: APSAGGCIKVHLVQPLRWSRGAP*PPGTDP
Trigger: GGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCT...CCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR GCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCGCCCTGCCCGTAGCCTaGATCGCCGTAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLAALPVA*IAVGVP
Trigger: GGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGC...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVACIAVGVPGCRLFLGGQLRRP*WCPLGR
Trigger: CCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG...GCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp TCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGTCCTTGTACCCTCCTTaGCCGCACCGCTCGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SLTRSSPSLYPPWPHRSPSLYPP*PHRSPV
Trigger: GACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGA...CGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCGAGGCCCGTAGCCACTaGCACCGCTGCCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLAEARSH*HRCRLV
Trigger: AACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTC...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACGAGGCCCGTAGCCACTaGCACCGCTGCCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDEARSH*HRCRLV
Trigger: AACCAGCCGGCAGCGGTGGCAGTGGCTACGGGCCTC...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp GTAGCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCCACACCACCGAGGTGTTaGGTCCCGAGGTCACAGGGT +
Preference number: 4 (lower is better)
Translates to: VATATAAGWLTIVRLVAATPPRC*VPRSQG
Trigger: ACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGT...GGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp CGTCGCTTCCGTGGCTCTTGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCCGCCTCCTGGGCTTAAGTaGTCCTCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RRFRGSCAPLIRHCASPPPPGLK*SSHFSL
Trigger: GAGGCTGAAGTGGGAGGATCACTTAAGCCCAGGAGG...CGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp TCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCATTCTCCCCCACCCCTAGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SQATSVPSRSQSHSPPPLGEGGG*TLRAVA
Trigger: GGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCC...TAGGGGTGGGGGAGAATGGCTCTGGCTACGACTTGGGACGGAAGTGGCCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TTGGGAGGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCCCACCCCAGGACGGGTaGAGGTGTGGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGGVEGERGESLKSRPPSPPQDG*RCGGRE
Trigger: CTCCCTCCCTCCACACCTCCACCCGTCCTGGGGTGG...GGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCCTCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTCCTCGAGGTGGGAGCTaGGCAGGAGCTACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: WWCPLGRWVHQSTLGAAPPRGGS*AGATCG
Trigger: CCCGCAAGTAGCTCCTGCCCAGCTCCCACCTCGAGG...AGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
3UTR CAA 72 bp CTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTaGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLRPTSSSLPWL*RSADSPLRKSP
Trigger: GGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp TTGCCCAGGCTGGTCTCGAACTCTTGGGCTCAAGCGGCCCGCCCGCCTCGGTCTCCCACTTCAGCCTCCTaGGTAGATGGGTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: LPRLVSNSWAQAARPPRSPTSAS*VDGSTD
Trigger: ATCTGTGGACCCATCTACTCAGGAGGCTGAAGTGGG...AGACCGAGGCGGGCGGGCCGCTTGAGCCCAAGAGTTCGAGACCAGCCTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp TCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGGTCACTCACCAGAGCCACTGCCACCGCTaGCGGCTGGTTGACCATAGT +
Preference number: 4 (lower is better)
Translates to: SSPSLYPPWPHRSPVTHQSHCHR*RLVDHS
Trigger: ACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCT...CTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCCCACACGCCACCGCTGCCGGCTaGTTGACCATAGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVEGERGESLKSRPPSPHATAAG*LTIVRL
Trigger: CAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGC...GTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TCGCTTCCGTGGCTCTTGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCCGATTCCTCGTCGCTTCCGTaGCTCTTGCGCTCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLPWLLRSADSPLRKSPDSSSLP*LLRSAD
Trigger: ATCAGCGGAGCGCAAGAGCCACGGAAGCGACGAGGA...ATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCAGGGGCTGCCCTTTCTaGAACCACCATGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLARGCPF*NHHGSP
Trigger: GGGGCTTCCATGGTGGTTTCAGAAAGGGCAGCCCCT...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: YQSLLRPTSSSLPWLLRSGEGGG*TLRAVA
Trigger: GGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCC...GGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GTAGCCACTGCCACCGCTGCCGGCTGGTTGACCATAGTCAGGCTGGTAGCCGCCTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTT +
Preference number: 4 (lower is better)
Translates to: VATATAAGWLTIVRLVAACPLGR*VHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCA...GGCGGCTACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp GGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTTGTTCTCTGGGTCTGTaGCCATCTTCACATCTGACA +
Preference number: 4 (lower is better)
Translates to: GALPVACIAVGVPGCRLFCSLGL*PSSHLT
Trigger: TGTCAGATGTGAAGATGGCCACAGACCCAGAGAACA...AAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp TATTGGTTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTGGTCTCGAACTCTTaGGCTCAAGCGGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YWFTDPLVSFLVPSLAAPLVSNS*AQAARP
Trigger: CGGGCGGGCCGCTTGAGCCCAAGAGTTCGAGACCAG...CGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp GGGTCTGTGGCCATCTTCACATCTGACAGCCCCTTGGCCCATGCCGATGAGCTACCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: GSVAIFTSDSPLAHADELPPATS*FTTSMS
Trigger: GGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCC +
Preference number: 4 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPISRGAP*PPGTDP
Trigger: GGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCT...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp GAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EDLGGAPSAGGCIKVHLVRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR GCA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCGTAGGCGTCCCCGGGTaGCGGTTGTTTCTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSAVGVPG*RLFLGG
Trigger: GCCCCCGAGAAACAACCGGCACCCGGGGACGCCTAC...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACAGGCGAACACAGCCGTaGCCAGAAAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDRRTQP*PESPAW
Trigger: CCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCT...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCCCACACCATGTGTTCCCTGTCTaGCGGCAGACAGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVEGERGESLKSRPPSPHHVFPV*RQTGIS
Trigger: GGAGATGCCTGTCTGCCGCCAGACAGGGAACACATG...GTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TTGGGAGGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCGGGGAAGGGTGTGTGTaGTGGGGTGCTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGGVEGERGESLKSRPPSGEGCV*WGASLW
Trigger: CCAGAGAGAAGCACCCCACCACACACACCCTTCCCC...GGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCCTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CAA 72 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATaGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: WGEAADLSPPPG*VSSSDLQDPRP
Trigger: TGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp GTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCACTCGACCTCGATGCTaGGGTCACTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VVPPRQVGASKYTWCSPFTRPRC*GHSRSC
Trigger: ACAAGACCGAGAGTGACCTCAGCATCGAGGTCGAGT...GAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR TCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCGGCTTGGCCCATTCCTaGATCCCACTTCTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLAGLAHS*IPLLAL
Trigger: CAAGGCAAGAAGTGGGATTCAGGAATGGGCCAAGCC...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp CGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGAACAGAGGGGTGGGAGCACACCTaGAGGGGTACTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: RQVGASKYTWCSPFAGTEGWEHT*RGTRTR
Trigger: TCGAGTTCGAGTACCCCTTCAGGTGTGCTCCCACCC...CTCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR TCA 90 bp TCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGGTCACTCACCAGCTCTTATTGGTTCACTaGCCCGCTCGTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSPSLYPPWPHRSPVTHQLLLVH*PARLLP
Trigger: AGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAG...CTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp CCCTCAGCGCCCTTCCAAGCCCCACCCCAGAATGCTCTAGCGCACTCCTCTCCTATGGCGAAGACCCATTaGAGCACCTTCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: PSAPFQAPPQNALAHSSPMAKTH*STFTKP
Trigger: CGGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCAT...AGGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCTTGGAAGGGCGCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp GTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCCCCTCGGCAGGTGGGTaGATCAAAGTACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: VVPPRQVGASKYTWCSPFPSAGG*IKVHLV
Trigger: CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGG...GAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR GCA 90 bp GCCTGTCTCCTTAAACACGAACCACAGGTTGCCGACCCAGAGCACCAGGTTCAGAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ACLLKHEPQVADPEHQVQRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...CTGAACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTTTAAGGAGACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp GCGGCCCAGCCTGTCTCCTTAAACACGAACCACAGGTTGCCGACCCAGAGCACCGGTCTCTCAGCTCCTTaGATGTGTTCCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AAQPVSLNTNHRLPTQSTGLSAP*MCSLSG
Trigger: GCCAGACAGGGAACACATGCAAGGAGCTGAGAGACC...GGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTTTAAGGAGACAGGCTGGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp GGCCCAGCCTGTCTCCTTAAACACGAACCACAGGTTGCCGACCCAGAGCACCAGACACGAACCACAGGTTaGCGACCCAGAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GPACLLKHEPQVADPEHQTRTTG*RPRAPG
Trigger: ACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGT...CTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTTTAAGGAGACAGGCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp GGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCCCACACTGTTCAGGCAGGCATTaGTGGAGGAACCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVEGERGESLKSRPPSPHCSGRH*WRNQGQ
Trigger: CTGGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACA...GTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp GCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCCACTCTCGGTCTTGTTaGCACAATCCACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALGRGGRSIPSSRIGELVHSRSC*HNPRSA
Trigger: AGCTGAGCGTGGATTGTGCCAACAAGACCGAGAGTG...GACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp AAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCCTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KTLVVPPRQVGASKYTWCLRRPW*CPLGRW
Trigger: CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG...GCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp TTGGGAGGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCTGGGGTGCTTCTCTCTaGATCCCACGCCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: LGGVEGERGESLKSRPPSWGASL*IPRLTL
Trigger: TAGGGTGAGGCGTGGGATCCAGAGAGAAGCACCCCA...GGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACCTCGAGGTGGGAGCTaGGCAGGAGCTACTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QLRRPWWCPLGRWVHQSTPRGGS*AGATCG
Trigger: CCCGCAAGTAGCTCCTGCCCAGCTCCCACCTCGAGG...TGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
3UTR CAA 72 bp GTGTTGAGTCCCGAGGTCACAGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATC +
Preference number: 4 (lower is better)
Translates to: VLSPEVTGSLSS*HVFPVWRQTGI
Trigger: GATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGGACTCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CAA 72 bp ACTCTTATTGGTTCACTGACCCGCTCGTCTCCTTCCTaGTACCCTCCTTGGCCGCACCGCTCGCCGGTCACT +
Preference number: 4 (lower is better)
Translates to: TLIGSLTRSSPS*YPPWPHRSPVT
Trigger: AGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp ACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCCTAGACCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TEPEGHSLCLPCSPHSPRPPATS*FTTSMS
Trigger: GGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR TCA 90 bp ATCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCC +
Preference number: 4 (lower is better)
Translates to: IKVHLVQPHSPRVQSSARSRGAP*PPGTDP
Trigger: GGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCT...CCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR TCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCGACAAAGAATTCGGCTaGCGAGGAGTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLADKEFG*RGVVPN
Trigger: GTTGGGGACTACTCCTCGTCAGCCGAATTCTTTGTC...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp TCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCATTCTCCCCCACCCCTACAAACACGGCCACGGTaGCAAAGAATTCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: SQATSVPSRSQSHSPPPLQTRPR*QRIRLT
Trigger: CGTCAGCCGAATTCTTTGTCACCGTGGCCGTGTTTG...TAGGGGTGGGGGAGAATGGCTCTGGCTACGACTTGGGACGGAAGTGGCCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp TGGATTTCCCTAACGGCCTTTGTTCAGGCAGGCATTGCTGGAGGAACCAAGGCCTGGGCACCTAGTGGATaGGGGGAGTGGAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: WISLTAFVQAGIAGGTKAWAPSG*GEWSEG
Trigger: GCCCTCACTCCACTCCCCTCATCCACTAGGTGCCCA...GGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACAAAGGCCGTTAGGGAAATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp TGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGATGGCGAAGACCCATTaGAGCACCTTCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: WCPLGRWVHQSTLGAAPSMAKTH*STFTKP
Trigger: CGGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCAT...CGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR GCA 90 bp GCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTCAAAGTACACTTGGTaGAGCCTGAAGGGGTACTCG +
Preference number: 4 (lower is better)
Translates to: ALGRGGRSIPSSRIGELVSKYTW*SLKGYS
Trigger: CGAGTACCCCTTCAGGCTGCACCAAGTGTACTTTGA...GACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp ACTTCTCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSLLRPSKKAGKPFQDPTRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...GGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp TGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCAGGTACAAGGCAGGTaGTCAGTGATCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: WCPLGRWVHQSTLGAAPSQVQGR*SVIPVD
Trigger: ATCCACTGGGATCACTGAGCACCTGCCTTGTACCTG...CGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR GCA 90 bp GTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCCACAGCCTATGTCTaGCTTGCTCACCACATAGTC +
Preference number: 4 (lower is better)
Translates to: VVPPRQVGASKYTWCSPFATAYV*LAHHIV
Trigger: GACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGC...GAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CCA 90 bp GTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCTGGCAAAGGCGAAGATaGCGAAGACCCATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VVPPRQVGASKYTWCSPFWQRRR*RRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCA...GAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CCA 90 bp ACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTT +
Preference number: 4 (lower is better)
Translates to: TRSSPQLRRPWWCPLGRWCPLGR*VHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCA...CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376303.6
ENST00000469389.5
CDS-3UTR CCA 90 bp TCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGCCAGAAAGTCCAGCATaGGCCCTTTGTTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLTRSSPSLYPPWPHRSPPESPA*ALCYSL
Trigger: GAGAGAATAACAAAGGGCCCATGCTGGACTTTCTGG...CGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GGGTCTGTGGCCATCTTCACATCTGACAGCCCCTTGGCCCATGCCGATGAGCTAAGGCGAACACAGCCGTaGCCAGAAAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GSVAIFTSDSPLAHADELRRTQP*PESPAW
Trigger: CCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCT...TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp TTTCTGAAACCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTAAGGGGGAAGAGGGGTaGGCCAGTCCCACAGACCCG +
Preference number: 4 (lower is better)
Translates to: FLKPPWKPHSKPHPVWNPKGEEG*ASPTDP
Trigger: CGGGTCTGTGGGACTGGCCCACCCCTCTTCCCCCTT...AGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp AGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAACAAACACGGCCACGGTaGCAAAGAATTCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: SPQLRRPWWCPLGRWVHQQTRPR*QRIRLT
Trigger: CGTCAGCCGAATTCTTTGTCACCGTGGCCGTGTTTG...TTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR TCA 90 bp GCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCGGTAGTTCTGCCTCTTaGTTGGCTCCTTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: ALGRGGRSIPSSRIGELVGSSAS*LAPSNF
Trigger: GAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTACC...GACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGCTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAISLDSSQATSVPSRSQLRRPW*CPLGRW
Trigger: CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCCTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPILRRPW*CPLGRW
Trigger: CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: YQSLLRPTSSSLPWLLRSQLRRP*WCPLGR
Trigger: CCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG...GGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GGGTCTGTGGCCATCTTCACATCTGACAGCCCCTTGGCCCATGCCGATGAGCTATGGCCAGAGCCCCCATaGAGTAGAGGAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: GSVAIFTSDSPLAHADELWPEPP*SRGRQT
Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCTCTGGCCA...TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp TCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCATTCTCCCCCACCCCTACAATACCGAAGGGTTTaGGAAAGGGTAGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQATSVPSRSQSHSPPPLQYRRV*ERVGVW
Trigger: CCAGACCCCTACCCTTTCCCAAACCCTTCGGTATTG...TAGGGGTGGGGGAGAATGGCTCTGGCTACGACTTGGGACGGAAGTGGCCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263233.9
3UTR CAA 72 bp GGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTaGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GAPSAGGCIKVH*VQPHSPRVQSS
Trigger: ACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR TCA 90 bp CAACACACGATCACAGGCACTACTGACATCACAGACATAGCAGAGGGTGCAGGACCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QHTITGTTDITDIAEGAGPPATS*FTTSMS
Trigger: GGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...TCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp TCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTCCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: SKYTWCSHIVLESRAVPGPPATS*FTTSMS
Trigger: GGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...ACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR TCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCACTCGACCTCGATGCTaGGGTCACTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLTRPRC*GHSRSC
Trigger: ACAAGACCGAGAGTGACCTCAGCATCGAGGTCGAGT...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp TTCACATCTGACAGCCCCTTGGCCCATGCCGATGAGCTAACTAGCCACATGAAGGGCCATCTTCACATCTaGCAGCCCCTTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: FTSDSPLAHADELTSHMKGHLHI*QPLGPC
Trigger: GCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCC...CTTCATGTGGCTAGTTAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACTCCCTCTTCCTCCTTTaGAATTCCACACTACTTCCC +
Preference number: 4 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDSLFLL*NSTLLP
Trigger: GGGAAGTAGTGTGGAATTTCAAAGGAGGAAGAGGGA...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp AAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCATGGCGAAGACCCATTaGAGCACCTTCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: KTLVVPPRQVGASKYTWCMAKTH*STFTKP
Trigger: CGGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCAT...GCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR GCA 90 bp ATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCCCCTCGGCAGGTGGGTaGATCAAAGTACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: IRLTRSSPQLRRPWWCPLPSAGG*IKVHLV
Trigger: CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGG...GAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376303.6
ENST00000469389.5
CDS-3UTR GCA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCCCCTCGGCAGGTGGGTaGATCAAAGTACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: YQSLLRPTSSSLPWLLRSPSAGG*IKVHLV
Trigger: CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGG...GGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGCCCTGCCCGTAGCCTaGATCGCCGTAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPIALPVA*IAVGVP
Trigger: GGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGC...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp CCTCCTATTAACCTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGAGCCACTGCCACCGCTaGCGGCTGGTTGACCATAGT +
Preference number: 4 (lower is better)
Translates to: PPINLAVSSREWGRVCVVSHCHR*RLVDHS
Trigger: ACTATGGTCAACCAGCCGGCAGCGGTGGCAGTGGCT...CACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCTCCCACTTCTTGCCTTaGTCAAGATCTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLASHFLP*SRSVPF
Trigger: AAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGA...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp CACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCAGCTCCTTGCATGTGTTCTTGGTGCAGCCCATTaGAGCACCTTCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: HRGVESRGHRVSQLLACVLGAAH*STFTKP
Trigger: CGGCTTTGTGAAGGTGCTGCAATGGGCTGCACCAAG...AACACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp AAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCTGGCAAAGGCGAAGATaGCGAAGACCCATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KTLVVPPRQVGASKYTWCWQRRR*RRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCA...GCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp TATTGGTTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGTGGCAAAGGCGAAGATaGCGAAGACCCATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YWFTDPLVSFLVPSLAAPWQRRR*RRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCA...CGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGAACACACTCTCGGTCTTGTTaGCACAATCCACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRQVGASKYTWCSPFAGTHSRSC*HNPRSA
Trigger: AGCTGAGCGTGGATTGTGCCAACAAGACCGAGAGTG...TGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CCA 90 bp CTGGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTT +
Preference number: 4 (lower is better)
Translates to: LEQSQRATAYVCLAHHIVCPLGR*VHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCA...GACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CCA 90 bp AGCTCCTTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATAATGCTAAGAAGACCTTGGTaGTGCCCCCTCGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSLHVFPVWRQTGISLIMLRRPW*CPLGRW
Trigger: CCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAG...CATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp CAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: QLRRPWWCPLGRWVHQSTQLRRP*WCPLGR
Trigger: CCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG...TGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp CCAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACTGGCCAGAGCCCCCATaGAGTAGAGGAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: PTKKTLVVPPRQVGASKYWPEPP*SRGRQT
Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCTCTGGCCA...GTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp CGAGGTCACAGGGTCTCTCAGCTCCTTGCATGTGTTCCCTGTCTGGCGGCAGACCAGACTACATCTGATTaGAGAAGGAGGTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RGHRVSQLLACVPCLAADQTTSD*RRRWVH
Trigger: GTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTG...GTCTGCCGCCAGACAGGGAACACATGCAAGGAGCTGAGAGACCCTGTGACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp ATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCGACAAAGAATTCGGCTaGCGAGGAGTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: IRLTRSSPQLRRPWWCPLDKEFG*RGVVPN
Trigger: GTTGGGGACTACTCCTCGTCAGCCGAATTCTTTGTC...GAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376303.6
ENST00000469389.5
CDS-3UTR TCA 90 bp TCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTGGGTGGGAGCACACCTaGAGGGGTACTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: SKYTWCSHIVLESRAVPGGWEHT*RGTRTR
Trigger: TCGAGTTCGAGTACCCCTTCAGGTGTGCTCCCACCC...ACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR GCA 90 bp CAACACACGATCACAGGCACTACTGACATCACAGACATAGCAGAGGGTGCAGGAAGCCCCACCCCAGAATaGTCTAGCGCACTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QHTITGTTDITDIAEGAGSPTPE*SSALLS
Trigger: GGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCT...TCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCAGACATAGCAGAGGGTaGAGGATAGGGGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSARHSRG*RIGAPD
Trigger: GTCTGGAGCCCCTATCCTGCACCCTCTGCTATGTCT...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp CTACCCCTGACTCTTATTGGTTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCGCTGATTCGCCACTaGGCAAGTCCCCCGATATTC +
Preference number: 4 (lower is better)
Translates to: LPLTLIGSLTRSSPSLYPPLIRH*ASPPIF
Trigger: GAATATCGGGGGACTTGCGCAGTGGCGAATCAGCGG...AGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAGTCAGGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGTGTAGCTGCCGCATGTaGCAAAGGCGAAGATGGCGA +
Preference number: 4 (lower is better)
Translates to: QAISLDSSQATSVPSRSQCSCRM*QRRRWR
Trigger: TCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACA...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CCTCCTATTAACCTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGCAACTAAGAAGACCTTaGTGGTGCCCCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPINLAVSSREWGRVCVVQLRRP*WCPLGR
Trigger: CCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG...CACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCTGGCCAGAGCCCCCATaGAGTAGAGGAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPIWPEPP*SRGRQT
Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCTCTGGCCA...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp TCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCATTCTCCCCCACCCCTATGTTCTCTGGGTCTGTaGCCATCTTCACATCTGACA +
Preference number: 4 (lower is better)
Translates to: SQATSVPSRSQSHSPPPLCSLGL*PSSHLT
Trigger: TGTCAGATGTGAAGATGGCCACAGACCCAGAGAACA...TAGGGGTGGGGGAGAATGGCTCTGGCTACGACTTGGGACGGAAGTGGCCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp GGAGTGGAGGGAGAGAGAGGAGAGAGTCTGAAGTCACGCCCACCCTCCCCACACCTTGATAATGTTCTCTaGGTCTGTGGCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GVEGERGESLKSRPPSPHLDNVL*VCGHLH
Trigger: GTGAAGATGGCCACAGACCCAGAGAACATTATCAAG...GTGTGGGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCTCTCCCTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGCTGGAACAGAGCATCAAAGTACACTTaGTGCAGCCCCTTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAGGCIKVHLVQPLRWNRASKYT*CSPFAG
Trigger: TCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGC...TCTGTTCCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR TCA 90 bp CCCAGTAAACGCCTTACGTACTCTCTACCCCTGACTCTTATTGGTTCACTGACCGGCCATCTTCACATCTaGCAGCCCCTTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: PSKRLTYSLPLTLIGSLTGHLHI*QPLGPC
Trigger: GCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCC...GGTCAGTGAACCAATAAGAGTCAGGGGTAGAGAGTACGTAAGGCGTTTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGACACCACCGAGGTGTTaGGTCCCGAGGTCACAGGGT +
Preference number: 4 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWTPPRC*VPRSQG
Trigger: ACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGT...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCTCACCAGACTACATCTaGTTGGAGAAGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLSPDYI*LEKEVG
Trigger: ACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTGA...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCATGGCGAAGACCCATTaGAGCACCTTCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPIMAKTH*STFTKP
Trigger: CGGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCAT...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGGCTCCCCACTGTAGCTaGCGCATGTGGCAAAGGCGA +
Preference number: 4 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWAPHCS*RMWQRR
Trigger: TCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGC...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp AGCTCCTTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATAATGCCCTCGGCAGGTGGGTaGATCAAAGTACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSLHVFPVWRQTGISLIMPSAGG*IKVHLV
Trigger: CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGG...CATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR GCA 90 bp CAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAAGTCCCCTCTCCACTaGCCAAACCCAGCCATTGTA +
Preference number: 4 (lower is better)
Translates to: QAISLDSSQATSVPSRSQKSPLH*PNPAIV
Trigger: TACAATGGCTGGGTTTGGGCAGTGGAGAGGGGACTT...CTGGCTACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp TTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCTCAGTGTGTGTGGTGGGGTaGTTCTCTCTGGATCCCACG +
Preference number: 4 (lower is better)
Translates to: FSLDPTPHPTSHITRLFSVCVVG*FSLDPT
Trigger: CGTGGGATCCAGAGAGAAGCACCCCACCACACACAC...TGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp CAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACAGGTACAAGGCAGGTaGTCAGTGATCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: QLRRPWWCPLGRWVHQSTQVQGR*SVIPVD
Trigger: ATCCACTGGGATCACTGAGCACCTGCCTTGTACCTG...TGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTGCCCCAGTGCCACCGCTGCCGGCTaGTTGACCATAGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VVLPLDWLLQTSVLTCPSATAAG*LTIVRL
Trigger: CAGCCTGACTATGGTCAACCAGCCGGCAGCGGTGGC...ACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CTCACCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTGAAGGGTGTGTGTGGTaGGGTGCTTCTCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: LTLQAISLDSSQATSVPSEGCVW*GASLWI
Trigger: GATCCAGAGAGAAGCACCCCACCACACACACCCTTC...ACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCCTACCTCCCTCCCATTaGCTCTTCATTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLLPPSH*LFILSI
Trigger: GATGGACAGAATGAAGAGCCAATGGGAGGGAGGTAG...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 72 bp GCCTTTCCGCCGAGTTGCCCTTCTACCTCCCTCCCATaGGCTCTTCATTCTGTCCATCTTGAAGCACCATTC +
Preference number: 4 (lower is better)
Translates to: AFPPSCPSTSLP*ALHSVHLEAPF
Trigger: GAATGGTGCTTCAAGATGGACAGAATGAAGAGCCAATGGGAGGGAGGTAGAAGGGCAACTCGGCGGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTCCCCCAGCCACCAGCTaGTTCACCACGTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPIPPATS*FTTSMS
Trigger: GGACATGGACGTGGTGAATCAGCTGGTGGCTGGGGG...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp TCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTACTCGACCTCGATGCTaGGGTCACTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SKYTWCSHIVLESRAVPGTRPRC*GHSRSC
Trigger: ACAAGACCGAGAGTGACCTCAGCATCGAGGTCGAGT...ACCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR GCA 90 bp TTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCAGAAGACCTTGGTGGTaGCCCCTCGGCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLNPTSCLAQDLSPLESSRRPWW*PLGRWV
Trigger: CACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCT...GCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGACACGAACCACAGGTTaGCGACCCAGAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWTRTTG*RPRAPG
Trigger: ACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGT...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp CCCAGTAAACGCCTTACGTACTCTCTACCCCTGACTCTTATTGGTTCACTGACCACACGAACCACAGGTTaGCGACCCAGAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PSKRLTYSLPLTLIGSLTTRTTG*RPRAPG
Trigger: ACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGT...GGTCAGTGAACCAATAAGAGTCAGGGGTAGAGAGTACGTAAGGCGTTTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGAGGCGAACACAGCCGTaGCCAGAAAGTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWRRTQP*PESPAW
Trigger: CCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCT...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TTCAGGAAGCCGAACACCACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCCTTGATAATGTTCTCTaGGTCTGTGGCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: FRKPNTTEVLSPEVTGSLLDNVL*VCGHLH
Trigger: GTGAAGATGGCCACAGACCCAGAGAACATTATCAAG...GAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTTCGGCTTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp CCCAGTAAACGCCTTACGTACTCTCTACCCCTGACTCTTATTGGTTCACTGACCCATGTGTTCCCTGTCTaGCGGCAGACAGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSKRLTYSLPLTLIGSLTHVFPV*RQTGIS
Trigger: GGAGATGCCTGTCTGCCGCCAGACAGGGAACACATG...GGTCAGTGAACCAATAAGAGTCAGGGGTAGAGAGTACGTAAGGCGTTTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp TGGATTTCCCTAACGGCCTTTGTTCAGGCAGGCATTGCTGGAGGAACCAAGGCCCCTTTCCATAGGCTCTaGTACCAATCCAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: WISLTAFVQAGIAGGTKAPFHRL*YQSKTH
Trigger: GTGGGTCTTGGATTGGTACCAGAGCCTATGGAAAGG...GGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACAAAGGCCGTTAGGGAAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCTCACCCTGTCTGGAACCCTaGCTTGGCCCATTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: FSLDPTPHPTSHITRLFSPCLEP*LGPFLN
Trigger: ATTCAGGAATGGGCCAAGCCAGGGTTCCAGACAGGG...TGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp AAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCGCATCAAAGTACACTTaGTGCAGCCACATAGTCCTA +
Preference number: 4 (lower is better)
Translates to: KTLVVPPRQVGASKYTWCASKYT*CSHIVL
Trigger: TAGGACTATGTGGCTGCACCAAGTGTACTTTGATGC...GCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTCCTCCCCTCCAGCGTTaGGGAGAGGCGGCAGATCTA +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPIPPLQR*GEAADL
Trigger: TAGATCTGCCGCCTCTCCCCAACGCTGGAGGGGAGG...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 72 bp CATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCTGTGGCCATCTTCACA +
Preference number: 4 (lower is better)
Translates to: HVFPVWRQTGIS*IMFSGSVAIFT
Trigger: TGTGAAGATGGCCACAGACCCAGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp TTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCGGCCATCTTCACATCTaGCAGCCCCTTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: FLNPTSCLAQDLSPLESSGHLHI*QPLGPC
Trigger: GCATGGGCCAAGGGGCTGTCAGATGTGAAGATGGCC...GCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp ACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACACCACCGAGGTGTTaGGTCCCGAGGTCACAGGGT +
Preference number: 4 (lower is better)
Translates to: TPIYPHHLLALSPIGLSVTPPRC*VPRSQG
Trigger: ACCCTGTGACCTCGGGACTCAACACCTCGGTGGTGT...GACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAAAGAGAGGAGAGAGTCTaGAGTCACGCCCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQREERV*SHAHPP
Trigger: GGGAGGGTGGGCGTGACTTCAGACTCTCTCCTCTCT...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp ACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCCTAGAAGCCTATGTCTGCCTTaGTCACCACATAGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TEPEGHSLCLPCSPHSPRSLCLP*SPHSPR
Trigger: TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCT...TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR GCA 90 bp ACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCGCCTTTCCGCCGAGTTaGCCTTCTACCTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TPIYPHHLLALSPIGLSVAFPPS*PSTSLP
Trigger: TGGGAGGGAGGTAGAAGGGCAACTCGGCGGAAAGGC...GACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp ATCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGCACTCTCGGTCTTGTTaGCACAATCCACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IKVHLVQPHSPRVQSSARHSRSC*HNPRSA
Trigger: AGCTGAGCGTGGATTGTGCCAACAAGACCGAGAGTG...CCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGTGGCCAGAGCCCCCATaGAGTAGAGGAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWWPEPP*SRGRQT
Trigger: TGTTTGCCTTCCTCTACTCCATGGGGGCTCTGGCCA...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCCCAGAAAGTCCAGCATaGGCCCTTTGTTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSAPESPA*ALCYSL
Trigger: GAGAGAATAACAAAGGGCCCATGCTGGACTTTCTGG...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CACATGAAGGCGAACACAGCCGTGGCCAGAAAGTCCAGCATGGGCCCTTTGTTACCAGAAAGTCCAGCATaGGCCCTTTGTTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: HMKANTAVARKSSMGPLLPESPA*ALCYSL
Trigger: GAGAGAATAACAAAGGGCCCATGCTGGACTTTCTGG...TAACAAAGGGCCCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCTTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CCA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCCTTGATAATGTTCTCTaGGTCTGTGGCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLLDNVL*VCGHLH
Trigger: GTGAAGATGGCCACAGACCCAGAGAACATTATCAAG...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTACAGACTACATCTGATTaGAGAAGGAGGTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PYKPYHSTLLRPLPSQVVQTTSD*RRRWVH
Trigger: GTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTG...TACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp AGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGTACCAATCCAAACCAAGGCCAGAGTTaGGAGGAGTGGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLPNVPSHTLSIGSGTNPNQGQS*EEWRER
Trigger: TCTCTCCCTCCACTCCTCCCAACTCTGGCCTTGGTT...TGGATTGGTACCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTACACAGCCAGACAAAATaGCAACACACGATCACAGGC +
Preference number: 4 (lower is better)
Translates to: PYKPYHSTLLRPLPSQVVHSQTK*QHTITG
Trigger: GCCTGTGATCGTGTGTTGCCATTTTGTCTGGCTGTG...TACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp TTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATAATGTTCTCTGACAAAGAATTCGGCTaGCGAGGAGTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LHVFPVWRQTGISLIMFSDKEFG*RGVVPN
Trigger: GTTGGGGACTACTCCTCGTCAGCCGAATTCTTTGTC...AGAGAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp CTCACCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTGATCACAGGCACTACTaGCATCACAGACATAGCAGA +
Preference number: 4 (lower is better)
Translates to: LTLQAISLDSSQATSVPSDHRHY*HHRHSR
Trigger: TCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATC...ACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTCTCCTCCCGGATTGGTaGGCTCGTCTGACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPILLPDW*ARLTFK
Trigger: CTTGAAGGTCAGACGAGCTCACCAATCCGGGAGGAG...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTTCGCTTCCGTGGCTCTTaGGCTCCGCTGATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: PFTLTIYWPYHLLAYQSLRFRGS*APLIRH
Trigger: GTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCG...AAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTATTTCTGAAACCACCATaGAAGCCCCATTCTAAGCCC +
Preference number: 4 (lower is better)
Translates to: PYKPYHSTLLRPLPSQVVFLKPP*KPHSKP
Trigger: GGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA...TACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp TCCTTGCATGTGTTCCCTGTCTGGCGGCAGACAGGCATCTCCTTGATAATGTTCGCATCAAAGTACACTTaGTGCAGCCCATTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLHVFPVWRQTGISLIMFASKYT*CSPLQH
Trigger: GTGCTGCAATGGGCTGCACCAAGTGTACTTTGATGC...GAACATTATCAAGGAGATGCCTGTCTGCCGCCAGACAGGGAACACATGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
3UTR CAA 72 bp AACACAGCCGTGGCCAGAAAGTCCAGCATGGGCCCTTaGTTATTCTCTCGGTACTTGTTCTGCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: NTAVARKSSMGP*LFSRYLFCRKM
Trigger: CATCTTCCTGCAGAACAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGACTTTCTGGCCACGGCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR TCA 90 bp AATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCACTCGACCTCGATGCTaGGGTCACTCTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NPTSCLAQDLSPLESSSVTRPRC*GHSRSC
Trigger: ACAAGACCGAGAGTGACCTCAGCATCGAGGTCGAGT...GACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTCAAACACGGCCACGGTaGCAAAGAATTCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPIQTRPR*QRIRLT
Trigger: CGTCAGCCGAATTCTTTGTCACCGTGGCCGTGTTTG...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp AATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCCCCTCGGCAGGTGGGTaGATCAAAGTACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: NPTSCLAQDLSPLESSSVPSAGG*IKVHLV
Trigger: CACCAAGTGTACTTTGATGCACCCACCTGCCGAGGG...GACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp TTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCGGTCTCTCAGCTCCTTaGATGTGTTCCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FLNPTSCLAQDLSPLESSGLSAP*MCSLSG
Trigger: GCCAGACAGGGAACACATGCAAGGAGCTGAGAGACC...GCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACGGTCTCTCAGCTCCTTaGATGTGTTCCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHGLSAP*MCSLSG
Trigger: GCCAGACAGGGAACACATGCAAGGAGCTGAGAGACC...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTT +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPICPLGR*VHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCA...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp TTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCAAGACCCACCTACTCTaGAGCCCACCATTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FLNPTSCLAQDLSPLESSKTHLL*SPPFCL
Trigger: GAGGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTT...GCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAAGTTTCATCACGGGAGTaGGGAAGGGTGTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQVSSRE*GRVCVV
Trigger: CACCACACACACCCTTCCCCACTCCCGTGATGAAAC...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp ATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGACACTTGGTGCAGCCTaGAGGGGTACTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: IPESHFLPCSRSVPFRIKTLGAA*RGTRTR
Trigger: TCGAGTTCGAGTACCCCTTCAGGCTGCACCAAGTGT...CTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp ATCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGTCAAAGTACACTTGGTaGAGCCACATAGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: IKVHLVQPHSPRVQSSARSKYTW*SHIVLE
Trigger: CTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGA...CCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CCA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAACACTCTCGGTCTTGTTaGCACAATCCACGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQHSRSC*HNPRSA
Trigger: AGCTGAGCGTGGATTGTGCCAACAAGACCGAGAGTG...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp ATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTT +
Preference number: 4 (lower is better)
Translates to: IPESHFLPCSRSVPFRIKCPLGR*VHQSTL
Trigger: AAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCA...CTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTGCCCCAGTCAGACTACATCTGATTaGAGAAGGAGGTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VVLPLDWLLQTSVLTCPSQTTSD*RRRWVH
Trigger: GTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTG...ACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp TTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCTCACTAACAAAACCCATCTaGAAGCTCCTATCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FSLDPTPHPTSHITRLFSLTKPI*KLLSKS
Trigger: GGACTTGGATAGGAGCTTCCAGATGGGTTTTGTTAG...TGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTACCCCTGACTCTTATTaGTTCACTGACCCGCTCGTC +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHLLALSPITPDSY*FTDPLV
Trigger: GACGAGCGGGTCAGTGAACCAATAAGAGTCAGGGGT...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACAGCCTCCTGAGTAGATaGGTCCACAGATGCATGCCA +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHSLLSR*VHRCMP
Trigger: TGGCATGCATCTGTGGACCCATCTACTCAGGAGGCT...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTTACACTTGGTGCAGCCTaGAGGGGTACTCGAACTCGA +
Preference number: 4 (lower is better)
Translates to: PFTLTIYWPYHLLAYQSLTLGAA*RGTRTR
Trigger: TCGAGTTCGAGTACCCCTTCAGGCTGCACCAAGTGT...AAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTTATTGGTGAGCTCGTCTaGCCTTCAAGATCCACGCCC +
Preference number: 4 (lower is better)
Translates to: PFTLTIYWPYHLLAYQSLIGELV*PSRSTP
Trigger: GGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAAT...AAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAATCAAAGTACACTTGGTaGAGCCTGAAGGGGTACTCG +
Preference number: 4 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQSKYTW*SLKGYS
Trigger: CGAGTACCCCTTCAGGCTGCACCAAGTGTACTTTGA...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp ATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGTGGCAAAGGCGAAGATaGCGAAGACCCATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IPESHFLPCSRSVPFRIKWQRRR*RRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCA...CTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACGCATCAAAGTACACTTaGTGCAGCCTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHASKYT*CSLKGY
Trigger: GTACCCCTTCAGGCTGCACCAAGTGTACTTTGATGC...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTGCCCCAGTTGTTCTCTGGGTCTGTaGCCATCTTCACATCTGACA +
Preference number: 4 (lower is better)
Translates to: VVLPLDWLLQTSVLTCPSCSLGL*PSSHLT
Trigger: TGTCAGATGTGAAGATGGCCACAGACCCAGAGAACA...ACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAAGTCCCACAGACCCGTTaGTTCTGTCCTCCTATTAAC +
Preference number: 4 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQVPQTR*FCPPIN
Trigger: GTTAATAGGAGGACAGAACCAACGGGTCTGTGGGAC...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR TCA 90 bp TCCCATTGGCTCTTCATTCTGTCCATCTTGAAGCACCATTCTTCTTTTCTCCATGACAAAGAATTCGGCTaGCGAGGAGTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SHWLFILSILKHHSSFLHDKEFG*RGVVPN
Trigger: GTTGGGGACTACTCCTCGTCAGCCGAATTCTTTGTC...ATGGAGAAAAGAAGAATGGTGCTTCAAGATGGACAGAATGAAGAGCCAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR GCA 90 bp TTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCCTGAATCCCACTTCTTaGCTTGCTCAAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLNPTSCLAQDLSPLESSLNPTS*LAQDLS
Trigger: GGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAG...GCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR GCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACACTTCAGTCCTTACTTaGCCCAGTAAACGCCTTACG +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHTSVLT*PSKRLT
Trigger: CGTAAGGCGTTTACTGGGGCAAGTAAGGACTGAAGT...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp ATTCCTGAATCCCACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGGCATCAAAGTACACTTaGTGCAGCCTGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPESHFLPCSRSVPFRIKASKYT*CSLKGY
Trigger: GTACCCCTTCAGGCTGCACCAAGTGTACTTTGATGC...CTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACATTCCCTCCCTTTATTaGTTGCTCTGCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHIPSLY*LLCFSP
Trigger: GGGAGAGAAGCAGAGCAACCAATAAAGGGAGGGAAT...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 72 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATaGGCTTATCAGTCACTTCTAAGACCCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PFTLTIYWPYHL*AYQSLLRPTSS
Trigger: CGAGGAGGTGGGTCTTAGAAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR TCA 90 bp CCCAGTAAACGCCTTACGTACTCTCTACCCCTGACTCTTATTGGTTCACTGACCTCATTCTGTCCATCTTaGAGCACCATTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PSKRLTYSLPLTLIGSLTSFCPS*STILLF
Trigger: GAAAAGAAGAATGGTGCTTCAAGATGGACAGAATGA...GGTCAGTGAACCAATAAGAGTCAGGGGTAGAGAGTACGTAAGGCGTTTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CCA 90 bp GCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACACCCTCACCATCTATTaGCCTTATCACCTATTGGCT +
Preference number: 4 (lower is better)
Translates to: AHLPSPSIGLITYWLISHTLTIY*PYHLLA
Trigger: AGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGT...GTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
3UTR CAA 72 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATaGGCCTTATCACCTATTGGCTTATCAGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: PSRSTPIYPHHL*ALSPIGLSVTS
Trigger: AGAAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp GGGGCCCGTACCCGCCGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GARTRRGPARSLHRRRRPGSLSS*HVFPVW
Trigger: CCAGACAGGGAACACATGCAAGGAGCTGAGAGACCC...GGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp CGGGGCCCTGCCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTCCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: RGPARSLHRRRRPRVPVVPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...AACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGGCAGGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp CATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCGCCGGGAGGCGACATCTGACAGCCCCTaGGCCCATGCCGATGAGCTA +
Preference number: 5 (lower is better)
Translates to: HRRRRPRVPVVSRGRREATSDSP*AHADEL
Trigger: TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGT...CGCCTCCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp GTAGCCGCCCTGAGGCCCGTAGGAATCCTGGGGCCCGTACCCGCCGGGGCCCTGACTTGGTGCAGCCCATaGCAGCACCTTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: VAALRPVGILGPVPAGALTWCSP*QHLHKA
Trigger: GGCTTTGTGAAGGTGCTGCAATGGGCTGCACCAAGT...CAGGGCCCCGGCGGGTACGGGCCCCAGGATTCCTACGGGCCTCAGGGCGGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp TCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGGTCACTCACCAGGCTGGTCTCGAACTCTaGGGCTCAAGCGGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: SSPSLYPPWPHRSPVTHQAGLEL*GSSGPP
Trigger: GGGCGGGCCGCTTGAGCCCAAGAGTTCGAGACCAGC...CTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TCGCTTCCGTGGCTCTTGCGCTCCGCTGATTCGCCACTGCGCAAGTCCCCCGATCGCCTTTCCGCCGAGTaGCCCTTCTACCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLPWLLRSADSPLRKSPDRLSAE*PFYLPP
Trigger: GGGAGGGAGGTAGAAGGGCAACTCGGCGGAAAGGCG...ATCGGGGGACTTGCGCAGTGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TGGATTTCCCTAACGGCCTTTGTTCAGGCAGGCATTGCTGGAGGAACCAAGGCCGTCCCCGGGTGCCGGTaGTTTCTCGGGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: WISLTAFVQAGIAGGTKAVPGCR*FLGGAG
Trigger: CCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGAC...GGCCTTGGTTCCTCCAGCAATGCCTGCCTGAACAAAGGCCGTTAGGGAAATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp ACTTCTCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCGTCCCCGGGTGCCGGTaGTTTCTCGGGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: TSLLRPSKKAGKPFQDPTVPGCR*FLGGAG
Trigger: CCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGAC...GGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGAGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS GCA 90 bp CGCCGGTCACTCACCAGACTACATCTGATTGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCCTTGCTGCCCATAGTCGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: RRSLTRLHLIGEGGG*TLRAVALLPIVALR
Trigger: CCTCAGGGCGACTATGGGCAGCAAGGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTGAGTGACCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS GCA 90 bp CTCTCCCTGCACTCTGCCCCAACAGCCCGGACCACACTCACCCATTaGAGCACCTTCACAAAGCCGAGGGGCTCCTTGACCACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: LSLHSAPTARTTLTH*STFTKPRGSLTTRN
Trigger: GTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTGAGTGTGGTCCGGGCTGTTGGGGCAGAGTGCAGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS-3UTR CAA 90 bp CCCTCAGCGCCCTTCCAAGCCCCACCCCAGAATGCTCTAGCGCACTCCTCTCCTAACACGAACCACAGGTaGCCGACCCAGAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PSAPFQAPPQNALAHSSPNTNHR*PTQSTR
Trigger: CCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTT...AGGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCTTGGAAGGGCGCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp GCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCACCGCTGCCGGCTGGTaGACCATAGTCAGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: ALGRGGRSIPSSRIGELVTAAGW*TIVRLV
Trigger: TACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGT...GACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp CCCGTAGCCTGCATCGCCGTAGGCGTCCCCGGGTGCCGGTTGTTTCTCGGGGGCTGCATCAAAGTACACTaGGTGCAGCCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PVACIAVGVPGCRLFLGGCIKVH*VQPIAA
Trigger: TGCTGCAATGGGCTGCACCAAGTGTACTTTGATGCA...GCCCCCGAGAAACAACCGGCACCCGGGGACGCCTACGGCGATGCAGGCTACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS CCA 90 bp CACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTGCCGCATGTaGCAAAGGCGAAGATGGCGAAGACCTTGGGCAGCAGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: HNPRSAGAPHCSCRM*QRRRWRRPWAAGMG
Trigger: CCCCATCCCTGCTGCCCAAGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS-3UTR CAA 90 bp GCCTGTCTCCTTAAACACGAACCACAGGTTGCCGACCCAGAGCACCAGGTTCAGCTGCGGGCCGTAGCCTaGCTGCCCATAGTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: ACLLKHEPQVADPEHQVQLRAVA*LPIVAL
Trigger: CAGGGCGACTATGGGCAGCAAGGCTACGGCCCGCAG...CTGAACCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTTTAAGGAGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS TCA 90 bp TTGGTGCAGCCCATTGCAGCACCTTCACAAAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCCCAGCCACCAGCTGATTCACCACGT +
Preference number: 5 (lower is better)
Translates to: LVQPIAAPSQSRGAP*PPGTDPQPPADSPR
Trigger: ACGTGGTGAATCAGCTGGTGGCTGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGCTGCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS TCA 90 bp CCACACTCACCCATTGCAGCACCTTCACAAAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCCCAGCCACCAGCTGATTCACCACGT +
Preference number: 5 (lower is better)
Translates to: PHSPIAAPSQSRGAP*PPGTDPQPPADSPR
Trigger: ACGTGGTGAATCAGCTGGTGGCTGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTGAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CCA 90 bp AGGTATTGGCCGGTTCCACCCTGCCCCTTCCTCTCCCAGGTCTGTTaGTATCCCAGGGTGGGAGCACACCTGAAGGGGTACTCGAACTCG +
Preference number: 5 (lower is better)
Translates to: RYWPVPPCPFLSQVC*YPRVGAHLKGYSNS
Trigger: CGAGTTCGAGTACCCCTTCAGGTGTGCTCCCACCCTGGGATACCAACAGACCTGGGAGAGGAAGGGGCAGGGTGGAACCGGCCAATACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000466635.1
ENST00000469389.5
ENST00000472737.1
ENST00000494396.5
CDS TCA 90 bp CCAGAAAGTCCCATTGCAGCACCTTCACAAAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCCCAGCCACCAGCTGATTCACCACGT +
Preference number: 5 (lower is better)
Translates to: PESPIAAPSQSRGAP*PPGTDPQPPADSPR
Trigger: ACGTGGTGAATCAGCTGGTGGCTGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGACTTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472598.5
CDS-3UTR CAA 90 bp TGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCCCTTCGGATGGCGAAGACCCATaGCAGCACCTTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: WCPLGRWVHQSTLGAAPSDGEDP*QHLHKA
Trigger: GGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCATC...CGAAGGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CAA 90 bp CCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTGGCTTGGCCAGGTCACTCTCGGTCTaGTTGGCACAATCCACGCTC +
Preference number: 5 (lower is better)
Translates to: PPWKPHSKPHPVWNPGLARSLSV*LAQSTL
Trigger: GAGCGTGGATTGTGCCAACAAGACCGAGAGTGACCT...GGCCAAGCCAGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp AGCCCCTTGGCCCATGCCGATGAGCTAACTAGCCACATGAAGGCGAACACAGCCAACACGAACCACAGGTaGCCGACCCAGAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SPLAHADELTSHMKANTANTNHR*PTQSTR
Trigger: CCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTT...GGCTGTGTTCGCCTTCATGTGGCTAGTTAGCTCATCGGCATGGGCCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp ACAGGCATCTCCTTGATAATGTTCTCTGGGTCTGTGGCCATCTTCACATCTGACGTCCCCGGGTGCCGGTaGTTTCTCGGGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: TGISLIMFSGSVAIFTSDVPGCR*FLGGAG
Trigger: CCCGGCGCCCCCGAGAAACAACCGGCACCCGGGGAC...GTCAGATGTGAAGATGGCCACAGACCCAGAGAACATTATCAAGGAGATGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp AGCCCCTTGGCCCATGCCGATGAGCTAACTAGCCACATGAAGGCGAACACAGCCACCGCTGCCGGCTGGTaGACCATAGTCAGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SPLAHADELTSHMKANTATAAGW*TIVRLV
Trigger: TACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGT...GGCTGTGTTCGCCTTCATGTGGCTAGTTAGCTCATCGGCATGGGCCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp CCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCGTACTGCGGGCCGTAGCCTaGCTGCCCATAGTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: PYKPYHSTLLRPLPSQVVLRAVA*LPIVAL
Trigger: CAGGGCGACTATGGGCAGCAAGGCTACGGCCCGCAG...TACGACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CCCTCAGCGCCCTTCCAAGCCCCACCCCAGAATGCTCTAGCGCACTCCTCTCCTCTCTCCAAGACCACCTaGGGTCCTAAACTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PSAPFQAPPQNALAHSSPLSKTT*GPKLSS
Trigger: AGAGGACAGTTTAGGACCCAAGGTGGTCTTGGAGAG...AGGAGAGGAGTGCGCTAGAGCATTCTGGGGTGGGGCTTGGAAGGGCGCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCTTCCTTGTACCCTCCTaGGCCGCACCGCTCGCCGGT +
Preference number: 5 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPIFLVPS*AAPLAG
Trigger: ACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAA...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp CCTCCCGGATTGGTGAGCTCGTCTGACCTTCAAGATCCACGCCCATTTACCCTCTCGCTTCCGTGGCTCTaGCGCTCCGCTGATTCGCCA +
Preference number: 5 (lower is better)
Translates to: PPGLVSSSDLQDPRPFTLSLPWL*RSADSP
Trigger: TGGCGAATCAGCGGAGCGCAAGAGCCACGGAAGCGA...GAGGGTAAATGGGCGTGGATCTTGAAGGTCAGACGAGCTCACCAATCCGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS GCA 90 bp TCTTGTTGGCACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTaGCGCATGTGGCAAAGGCGAAGATGGCGAAGACCTTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SCWHNPRSAGAPHCS*RMWQRRRWRRPWAA
Trigger: TGCTGCCCAAGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTGCCAACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS-3UTR CAA 90 bp TCTCAGGCCACTTCCGTCCCAAGTCGTAGCCAGAGCCATTCTCCCCCACCCCTAGATGGCGAAGACCCATaGCAGCACCTTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: SQATSVPSRSQSHSPPPLDGEDP*QHLHKA
Trigger: GGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCATC...TAGGGGTGGGGGAGAATGGCTCTGGCTACGACTTGGGACGGAAGTGGCCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp TTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCAGCCACAGGTCACTCTCGGTCTaGTTGGCACAATCCACGCTC +
Preference number: 5 (lower is better)
Translates to: LVVPPRQVGASKYTWCSHRSLSV*LAQSTL
Trigger: GAGCGTGGATTGTGCCAACAAGACCGAGAGTGACCT...GTGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CAA 90 bp ATTCGGCTGACGAGGAGTAGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCCCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: IRLTRSSPQLRRPWWCPLPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...GAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACTCCTCGTCAGCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376303.6
ENST00000469389.5
CDS-3UTR CAA 90 bp TATCAGTCACTTCTAAGACCCACCTCCTCGTCGCTTCCGTGGCTCTTGCGCTCCCCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: YQSLLRPTSSSLPWLLRSPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...GGAGCGCAAGAGCCACGGAAGCGACGAGGAGGTGGGTCTTAGAAGTGACTGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp GCGTTGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTCCAGCATGGGCCCTTaGTTATTCTCTCGGTACTTG +
Preference number: 5 (lower is better)
Translates to: ALGRGGRSIPSSRIGELVSSMGP*LFSRYL
Trigger: CAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGA...GACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp ACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCCTAGACCTCTCCCAGGTCTGTaGGTATCCCAGGGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: TEPEGHSLCLPCSPHSPRPLPGL*VSQGGS
Trigger: GCTCCCACCCTGGGATACCAACAGACCTGGGAGAGG...TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS GCA 90 bp TCTTGTTGGCACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTaGCGCATGTGGCAAAGGCGAAGATGGCGAAGACCCATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SCWHNPRSAGAPHCS*RMWQRRRWRRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTGCCAACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263233.9
ENST00000466635.1
ENST00000469389.5
ENST00000472737.1
ENST00000479808.5
CDS GCA 90 bp CTTACCCCTTCGCTGGAACAGAGCCAGAGGGCCACAGCCTATGTCTaGCTTGCTCACCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LTPSLEQSQRATAYV*LAHHIVLESRAVPG
Trigger: ACCTGGCACTGCTCTGGACTCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5
CDS CCA 90 bp CACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTGCCGCATGTaGCAAAGGCGAAGATGGCGAAGACCCATTGCAGCACCTTCACAA +
Preference number: 5 (lower is better)
Translates to: HNPRSAGAPHCSCRM*QRRRWRRPIAAPSQ
Trigger: TTGTGAAGGTGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263233.9
ENST00000466635.1
ENST00000469389.5
ENST00000472737.1
ENST00000479808.5
CDS CCA 90 bp CTTATTGGTTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTaGCCGCACCGCTCGCCGGTCACTCACCAGACTACATCTGATTGG +
Preference number: 5 (lower is better)
Translates to: LIGSLTRSSPSLYPP*PHRSPVTHQTTSDW
Trigger: CCAATCAGATGTAGTCTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACTGCATCAAAGTACACTaGGTGCAGCCTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDCIKVH*VQPEGV
Trigger: TACCCCTTCAGGCTGCACCAAGTGTACTTTGATGCA...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp ACTTCTCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCAACACCACCGAGGTGTaGAGTCCCGAGGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: TSLLRPSKKAGKPFQDPTNTTEV*SPEVTG
Trigger: CCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTT...GGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCAACACGAACCACAGGTaGCCGACCCAGAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPINTNHR*PTQSTR
Trigger: CCTGGTGCTCTGGGTCGGCAACCTGTGGTTCGTGTT...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TTTCTGAAACCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTACAGGGTCTCCTGGCTaGAGGGGTGGAGACCTAGGG +
Preference number: 5 (lower is better)
Translates to: FLKPPWKPHSKPHPVWNPTGSPG*RGGDLG
Trigger: CCCTAGGTCTCCACCCCTCAAGCCAGGAGACCCTGT...AGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CTACCCCTGACTCTTATTGGTTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCGCTCGTCTCCTTCCTaGTACCCTCCTTGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: LPLTLIGSLTRSSPSLYPRSSPS*YPPWPH
Trigger: GTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCG...AGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAGTCAGGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CCA 90 bp AGTAGTCCCCAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTTGGTGCAGCCCATTGCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SSPQLRRPWWCPLGR*VHQSTLGAAHCSTF
Trigger: GAAGGTGCTGCAATGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGGGGACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp TGGGGAGAGGCGGCAGATCTATCCCCTCCTCCCGGATTGGTGAGCTCGTCTGACCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WGEAADLSPPPGLVSSSDQTGIS*IMFSGS
Trigger: AGACCCAGAGAACATTATCAAGGAGATGCCTGTCTG...GTCAGACGAGCTCACCAATCCGGGAGGAGGGGATAGATCTGCCGCCTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TTTCTGAAACCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTAACACCACCGAGGTGTaGAGTCCCGAGGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: FLKPPWKPHSKPHPVWNPNTTEV*SPEVTG
Trigger: CCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTT...AGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CCTCCTATTAACCTAGCTGTTTCATCACGGGAGTGGGGAAGGGTGTGTGTGGTGACCGCTGCCGGCTGGTaGACCATAGTCAGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: PPINLAVSSREWGRVCVVTAAGW*TIVRLV
Trigger: TACCAGCCTGACTATGGTCAACCAGCCGGCAGCGGT...CACCACACACACCCTTCCCCACTCCCGTGATGAAACAGCTAGGTTAATAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp ATCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCAGGCCTCTCCCAGGTCTGTaGGTATCCCAGGGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: IKVHLVQPHSPRVQSSARPLPGL*VSQGGS
Trigger: GCTCCCACCCTGGGATACCAACAGACCTGGGAGAGG...CCTGGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CAA 90 bp TCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTGGCCGCACCGCTCGCCGTGGCCTTATCACCTATaGGCTTATCAGTCACTTCTA +
Preference number: 5 (lower is better)
Translates to: SLTRSSPSLYPPWPHRSPWPYHL*AYQSLL
Trigger: TAGAAGTGACTGATAAGCCAATAGGTGATAAGGCCA...CGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp ACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCCTAGAAGGTCACTCTCGGTCTaGTTGGCACAATCCACGCTC +
Preference number: 5 (lower is better)
Translates to: TEPEGHSLCLPCSPHSPRRSLSV*LAQSTL
Trigger: GAGCGTGGATTGTGCCAACAAGACCGAGAGTGACCT...TCTAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS-3UTR CAA 90 bp CAACACACGATCACAGGCACTACTGACATCACAGACATAGCAGAGGGTGCAGGACCAACTAAGAAGACCTaGGTGGTGCCCCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: QHTITGTTDITDIAEGAGPTKKT*VVPPRQ
Trigger: CTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTGG...TCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp GAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACCACATAGTCCTATGCATCAAAGTACACTaGGTGCAGCCCCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: EQSQRATAYVCLAHHIVLCIKVH*VQPLRW
Trigger: CCAGCGAAGGGGCTGCACCAAGTGTACTTTGATGCA...TAGGACTATGTGGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466635.1
CDS TCA 90 bp CCACCCCCACCCCCTAATCAGGGCTCATCGGGACCAAGGACAAGCTaGTTACAAGGGTATGGCTGTCTCTTCCTGTTTCTCTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: PPPPPNQGSSGPRTS*LQGYGCLFLFLSLC
Trigger: ACACAGAGAGAGAAACAGGAAGAGACAGCCATACCCTTGTAATCAGCTTGTCCTTGGTCCCGATGAGCCCTGATTAGGGGGTGGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS-3UTR CAA 90 bp ACCACCGAGGTGTTGAGTCCCGAGGTCACAGGGTCTCTCAGCTCCTTGCATGTGCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: TTEVLSPEVTGSLSSLHVQTGIS*IMFSGS
Trigger: AGACCCAGAGAACATTATCAAGGAGATGCCTGTCTG...CACATGCAAGGAGCTGAGAGACCCTGTGACCTCGGGACTCAACACCTCGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp CAACACACGATCACAGGCACTACTGACATCACAGACATAGCAGAGGGTGCAGGAGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: QHTITGTTDITDIAEGAGGSLSS*HVFPVW
Trigger: CCAGACAGGGAACACATGCAAGGAGCTGAGAGACCC...TCCTGCACCCTCTGCTATGTCTGTGATGTCAGTAGTGCCTGTGATCGTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp AAGACCTTGGTGGTGCCCCCTCGGCAGGTGGGTGCATCAAAGTACACTTGGTGCTGCATCAAAGTACACTaGGTGCAGCCACATAGTCCT +
Preference number: 5 (lower is better)
Translates to: KTLVVPPRQVGASKYTWCCIKVH*VQPHSP
Trigger: AGGACTATGTGGCTGCACCAAGTGTACTTTGATGCA...GCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CAA 90 bp TCTTTTAAGGCCCAGCAAGAAGGCCGGCAAACCTTTCCAGGACCCCACCCTATCTGGGATTTCATCATGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SFKAQQEGRQTFPGPHPIWDFIM*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACATGATGAAATCCCA...GATAGGGTGGGGTCCTGGAAAGGTTTGCCGGCCTTCTTGCTGGGCCTTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TGCATCAAAGTACACTTGGTGCAGCCACATAGTCCTAGAGTCCAGAGCAGTGCCGATGGCGAAGACCCATaGCAGCACCTTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: CIKVHLVQPHSPRVQSSADGEDP*QHLHKA
Trigger: GGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCATC...GGCACTGCTCTGGACTCTAGGACTATGTGGCTGCACCAAGTGTACTTTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469389.5
CDS-3UTR CAA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCTGCATCAAAGTACACTaGGTGCAGCCTGAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSACIKVH*VQPEGV
Trigger: TACCCCTTCAGGCTGCACCAAGTGTACTTTGATGCA...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp ATAGGCTCTGGTACCAATCCAAGACCCACCTACTCTGGAGCCCACCATTCTGCCTCCAGCATGGGCCCTTaGTTATTCTCTCGGTACTTG +
Preference number: 5 (lower is better)
Translates to: IGSGTNPRPTYSGAHHSASSMGP*LFSRYL
Trigger: CAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGA...GGCAGAATGGTGGGCTCCAGAGTAGGTGGGTCTTGGATTGGTACCAGAGCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CACATGAAGGCGAACACAGCCGTGGCCAGAAAGTCCAGCATGGGCCCTTTGTTATCCAGCATGGGCCCTTaGTTATTCTCTCGGTACTTG +
Preference number: 5 (lower is better)
Translates to: HMKANTAVARKSSMGPLLSSMGP*LFSRYL
Trigger: CAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGA...TAACAAAGGGCCCATGCTGGACTTTCTGGCCACGGCTGTGTTCGCCTTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp AGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGTACCAATCCAACATCTGACAGCCCCTaGGCCCATGCCGATGAGCTA +
Preference number: 5 (lower is better)
Translates to: SLPNVPSHTLSIGSGTNPTSDSP*AHADEL
Trigger: TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGT...TGGATTGGTACCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CAGAAAGTCCAGCATGGGCCCTTTGTTATTCTCTCGGTACTTGTTCTGCAGGAAAACACCACCGAGGTGTaGAGTCCCGAGGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: QKVQHGPFVILSVLVLQENTTEV*SPEVTG
Trigger: CCCTGTGACCTCGGGACTCAACACCTCGGTGGTGTT...TTCCTGCAGAACAAGTACCGAGAGAATAACAAAGGGCCCATGCTGGACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS-3UTR CAA 90 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTTCTGCGGGCCGTAGCCTaGCTGCCCATAGTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: PFTLTIYWPYHLLAYQSLLRAVA*LPIVAL
Trigger: CAGGGCGACTATGGGCAGCAAGGCTACGGCCCGCAG...AAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp CTCACCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTACAATACCGAAGGGTTaGGGAAAGGGTAGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LTLQAISLDSSQATSVPSTIPKG*GKGRGL
Trigger: CAGACCCCTACCCTTTCCCAAACCCTTCGGTATTGT...ACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp GTAGTTCTGCCTCTTGATTGGCTCCTTCAAACTTCAGTCCTTACTTGCCCCAGTACATCTGACAGCCCCTaGGCCCATGCCGATGAGCTA +
Preference number: 5 (lower is better)
Translates to: VVLPLDWLLQTSVLTCPSTSDSP*AHADEL
Trigger: TAGCTCATCGGCATGGGCCAAGGGGCTGTCAGATGT...ACTGGGGCAAGTAAGGACTGAAGTTTGAAGGAGCCAATCAAGAGGCAGAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp CCTTCAAGATCCACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTTCCCCTCCTCCCGGATaGGTGAGCTCGTCTGACCTT +
Preference number: 5 (lower is better)
Translates to: PSRSTPIYPHHLLALSPISPPPG*VSSSDL
Trigger: AAGGTCAGACGAGCTCACCAATCCGGGAGGAGGGGA...AATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGTGGATCTTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CCA 90 bp TCTTACTTTTGTATCTTGTTTATTGCCTGTCCCTTACCCCTTCGCTaGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCCTTGCTCACC +
Preference number: 5 (lower is better)
Translates to: SYFCILFIACPLPLR*NRARGPQPMSALLT
Trigger: GGTGAGCAAGGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGTAAGGGACAGGCAATAAACAAGATACAAAAGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5
CDS-3UTR CAA 90 bp CTCACCCTACAAGCCATATCACTCGACTCTTCTCAGGCCACTTCCGTCCCAAGTCAGACAGGCATCTCCTaGATAATGTTCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTLQAISLDSSQATSVPSQTGIS*IMFSGS
Trigger: AGACCCAGAGAACATTATCAAGGAGATGCCTGTCTG...ACTTGGGACGGAAGTGGCCTGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp ACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCGGGTCTCTCAGCTCCTaGCATGTGTTCCCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TPIYPHHLLALSPIGLSVGSLSS*HVFPVW
Trigger: CCAGACAGGGAACACATGCAAGGAGCTGAGAGACCC...GACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TTTCTGAAACCACCATGGAAGCCCCATTCTAAGCCCCACCCTGTCTGGAACCCTTCTTTAACCCTGGAGTaGGATTTCCCTAACGGCCTT +
Preference number: 5 (lower is better)
Translates to: FLKPPWKPHSKPHPVWNPSLTLE*DFPNGL
Trigger: AAGGCCGTTAGGGAAATCCAACTCCAGGGTTAAAGA...AGGGTTCCAGACAGGGTGGGGCTTAGAATGGGGCTTCCATGGTGGTTTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp TTCTCTCTGGATCCCACGCCTCACCCTACAAGCCATATCACTCGACTCTTCTCACCTGAATCCCACTTCTaGCCTTGCTCAAGATCTGTC +
Preference number: 5 (lower is better)
Translates to: FSLDPTPHPTSHITRLFSPESHF*PCSRSV
Trigger: GACAGATCTTGAGCAAGGCAAGAAGTGGGATTCAGG...TGAGAAGAGTCGAGTGATATGGCTTGTAGGGTGAGGCGTGGGATCCAGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS GCA 90 bp GTGTCTCTTTCTCTCTGTGTCTCTCTCTCCCTCACCCTGTTTTCCTaGCTCTCTCCCTGCGTCTGTTTCTCTTTGCATCTGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: VSLSLCVSLSLTLFS*LSPCVCFSLHLFSV
Trigger: CACAGAAAACAGATGCAAAGAGAAACAGACGCAGGGAGAGAGGCAGGAAAACAGGGTGAGGGAGAGAGAGACACAGAGAGAAAGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS-3UTR CAA 90 bp ACGCCCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCGATGGCGAAGACCCATaGCAGCACCTTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: TPIYPHHLLALSPIGLSVDGEDP*QHLHKA
Trigger: GGCTTTGTGAAGGTGCTGCAATGGGTCTTCGCCATC...GACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp ACTTCTTGCCTTGCTCAAGATCTGTCCCCTTTAGAATCAAGCTCAGTCTCCCAATCACTCTCGGTCTTGTaGGCACAATCCACGCTCAGC +
Preference number: 5 (lower is better)
Translates to: TSCLAQDLSPLESSSVSQSLSVL*AQSTLS
Trigger: GCTGAGCGTGGATTGTGCCAACAAGACCGAGAGTGA...TTGGGAGACTGAGCTTGATTCTAAAGGGGACAGATCTTGAGCAAGGCAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp AATCAAGCTCAGTCTCCCAAATGTTCCAAGCCACACCCTTTCCATAGGCTCTGGATCCCACTTCTTGCCTaGCTCAAGATCTGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: NQAQSPKCSKPHPFHRLWIPLLA*LKICPL
Trigger: AAGGGGACAGATCTTGAGCAAGGCAAGAAGTGGGAT...CCAGAGCCTATGGAAAGGGTGTGGCTTGGAACATTTGGGAGACTGAGCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263233.9
CDS-3UTR CAA 90 bp CCATTTACCCTCACCATCTATTGGCCTTATCACCTATTGGCTTATCAGTCACTTAGGTCACTCTCGGTCTaGTTGGCACAATCCACGCTC +
Preference number: 5 (lower is better)
Translates to: PFTLTIYWPYHLLAYQSLRSLSV*LAQSTL
Trigger: GAGCGTGGATTGTGCCAACAAGACCGAGAGTGACCT...AAGTGACTGATAAGCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS-3UTR CAA 90 bp TCCCATTGGCTCTTCATTCTGTCCATCTTGAAGCACCATTCTTCTTTTCTCCATTACCCTCACCATCTATaGGCCTTATCACCTATTGGC +
Preference number: 5 (lower is better)
Translates to: SHWLFILSILKHHSSFLHYPHHL*ALSPIG
Trigger: GCCAATAGGTGATAAGGCCAATAGATGGTGAGGGTA...ATGGAGAAAAGAAGAATGGTGCTTCAAGATGGACAGAATGAAGAGCCAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CCA 72 bp CACCGCTCGCCGGTCACTCACCAGACTACATCTGATTaGAGAAGGAGGTGGGTGCACCCTGCGGGCCGTAGC +
Preference number: 6 (lower is better)
Translates to: HRSPVTHQTTSD*RRRWVHPAGRS
Trigger: GCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTGAGTGACCGGCGAGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CCA 72 bp AGGGATGGGGATGGCCACAGTGAACCTGTGTGCATGTaGGAGGGAGGTGCCCTCCTCTGGACAGATCGGGGG +
Preference number: 6 (lower is better)
Translates to: RDGDGHSEPVCM*EGGALLWTDRG
Trigger: CCCCCGATCTGTCCAGAGGAGGGCACCTCCCTCCCACATGCACACAGGTTCACTGTGGCCATCCCCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CAA 90 bp TCTCTCCCTGCACTCTGCCCCAACAGCCCGGACCACACTCACCCATaGCAGCACCTTCACAAAGCCGAGGGGCTCCTTGACCACCCGGAA +
Preference number: 6 (lower is better)
Translates to: SLPALCPNSPDHTHP*QHLHKAEGLLDHPE
Trigger: TTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTGAGTGTGGTCCGGGCTGTTGGGGCAGAGTGCAGGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS TCA 72 bp CCCATTGCAGCACCTTCACAAAGCCGAGGGGCTCCTTaGCCACCCGGAACTGACCCCCAGCCACCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: PIAAPSQSRGAP*PPGTDPQPPAD
Trigger: ATCAGCTGGTGGCTGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000263233.9
ENST00000376303.6
ENST00000466635.1
ENST00000469389.5
ENST00000472598.5
ENST00000472737.1
ENST00000479808.5
ENST00000494396.5
CDS GCA 72 bp CACTCTGCCCCAACAGCCCGGACCACACTCACCCATTaGAGCACCTTCACAAAGCCGAGGGGCTCCTTGACC +
Preference number: 6 (lower is better)
Translates to: HSAPTARTTLTH*STFTKPRGSLT
Trigger: GGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTGAGTGTGGTCCGGGCTGTTGGGGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CCA 72 bp TCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTTaGCCGCACCGCTCGCCGGTCACTCACCAGACTACA +
Preference number: 6 (lower is better)
Translates to: SLTRSSPSLYPP*PHRSPVTHQTT
Trigger: TGTAGTCTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CCA 72 bp CGCTCAGCTGGAGCTCCCCACTGTAGCTGCCGCATGTaGCAAAGGCGAAGATGGCGAAGACCTTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: RSAGAPHCSCRM*QRRRWRRPWAA
Trigger: TGCTGCCCAAGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CAA 72 bp TTCACTGACCCGCTCGTCTCCTTCCTTGTACCCTCCTaGGCCGCACCGCTCGCCGGTCACTCACCAGACTAC +
Preference number: 6 (lower is better)
Translates to: FTDPLVSFLVPS*AAPLAGHSPDY
Trigger: GTAGTCTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS CAA 72 bp GCACTCTGCCCCAACAGCCCGGACCACACTCACCCATaGCAGCACCTTCACAAAGCCGAGGGGCTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: ALCPNSPDHTHP*QHLHKAEGLLD
Trigger: GTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTGAGTGTGGTCCGGGCTGTTGGGGCAGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS GCA 72 bp CACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTaGCGCATGTGGCAAAGGCGAAGATGGCGAAGACCC +
Preference number: 6 (lower is better)
Translates to: HNPRSAGAPHCS*RMWQRRRWRRP
Trigger: GGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263233.9
ENST00000466635.1
ENST00000469389.5
ENST00000472737.1
ENST00000479808.5
CDS CCA 72 bp CGCTCAGCTGGAGCTCCCCACTGTAGCTGCCGCATGTaGCAAAGGCGAAGATGGCGAAGACCCATTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RSAGAPHCSCRM*QRRRWRRPIAA
Trigger: TGCTGCAATGGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263233.9
ENST00000466635.1
ENST00000469389.5
ENST00000472737.1
ENST00000479808.5
CDS CAA 90 bp CTACCCCTGACTCTTATTGGTTCACTGACCCGCTCGTCTCCTTCCTaGTACCCTCCTTGGCCGCACCGCTCGCCGGTCACTCACCAGACT +
Preference number: 6 (lower is better)
Translates to: LPLTLIGSLTRSSPS*YPPWPHRSPVTHQT
Trigger: AGTCTGGTGAGTGACCGGCGAGCGGTGCGGCCAAGGAGGGTACAAGGAAGGAGACGAGCGGGTCAGTGAACCAATAAGAGTCAGGGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS GCA 72 bp CTCACCAGACTACATCTGATTGGAGAAGGAGGTGGGTaGACCCTGCGGGCCGTAGCCTTGCTGCCCATAGTC +
Preference number: 6 (lower is better)
Translates to: LTRLHLIGEGGG*TLRAVALLPIV
Trigger: GACTATGGGCAGCAAGGCTACGGCCCGCAGGGTGCACCCACCTCCTTCTCCAATCAGATGTAGTCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479808.5
CDS GCA 72 bp CACAATCCACGCTCAGCTGGAGCTCCCCACTGTAGCTaGCGCATGTGGCAAAGGCGAAGATGGCGAAGACCT +
Preference number: 6 (lower is better)
Translates to: HNPRSAGAPHCS*RMWQRRRWRRP
Trigger: AGGTCTTCGCCATCTTCGCCTTTGCCACATGCGGCAGCTACAGTGGGGAGCTCCAGCTGAGCGTGGATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CCA 72 bp CAACTAAGAAGACCTTGGTGGTGCCCCCTCGGCAGGTaGGTGCATCAAAGTACACTTGGTGCAGCCCATTGC +
Preference number: 6 (lower is better)
Translates to: QLRRPWWCPLGR*VHQSTLGAAHC
Trigger: GCAATGGGCTGCACCAAGTGTACTTTGATGCACCCACCTGCCGAGGGGGCACCACCAAGGTCTTCTTAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376303.6
CDS TCA 72 bp CTCCCACTTCACAACGGGGGTACCCTCAGCCCTATGTaGCGTCACAGCTCATCTGTTTTCTGGCTTCAGACC +
Preference number: 6 (lower is better)
Translates to: LPLHNGGTLSPM*RHSSSVFWLQT
Trigger: GGTCTGAAGCCAGAAAACAGATGAGCTGTGACGTCACATAGGGCTGAGGGTACCCCCGTTGTGAAGTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS CCA 72 bp TGTATCTTGTTTATTGCCTGTCCCTTACCCCTTCGCTaGAACAGAGCCAGAGGGCCACAGCCTATGTCTGCC +
Preference number: 6 (lower is better)
Translates to: CILFIACPLPLR*NRARGPQPMSA
Trigger: GGCAGACATAGGCTGTGGCCCTCTGGCTCTGTTCCAGCGAAGGGGTAAGGGACAGGCAATAAACAAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5
CDS CAA 72 bp TTCCATGCTGACCTCCCTCTTCTCTGTTTGTCTCTGTaGTTCTCTGTGTATCTCACTGTGTCTCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: FHADLPLLCLSL*FSVYLTVSLFL
Trigger: GAGAAACAGAGACACAGTGAGATACACAGAGAACAACAGAGACAAACAGAGAAGAGGGAGGTCAGCATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494396.5
CDS GCA 72 bp GTATATACACCTGTCTTACTTTTGTATCTTGTTTATTaGCTGTCCCTTACCCCTTCGCTGGAACAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VYTPVLLLYLVY*LSLTPSLEQSQ
Trigger: CTGGCTCTGTTCCAGCGAAGGGGTAAGGGACAGGCAATAAACAAGATACAAAAGTAAGACAGGTGTATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5
CDS CAA 90 bp TGGGTACCTACTGGGTTAAGGTATGTATATACACCTGTCTTACTTTaGTATCTTGTTTATTGCCTGTCCCTTACCCCTTCGCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: WVPTGLRYVYTPVLL*YLVYCLSLTPSLEQ
Trigger: CTGTTCCAGCGAAGGGGTAAGGGACAGGCAATAAACAAGATACAAAAGTAAGACAGGTGTATATACATACCTTAACCCAGTAGGTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5
CDS CAA 72 bp ACTGGGTTAAGGTATGTATATACACCTGTCTTACTTTaGTATCTTGTTTATTGCCTGTCCCTTACCCCTTCG +
Preference number: 6 (lower is better)
Translates to: TGLRYVYTPVLL*YLVYCLSLTPS
Trigger: CGAAGGGGTAAGGGACAGGCAATAAACAAGATACAAAAGTAAGACAGGTGTATATACATACCTTAACCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472737.1
ENST00000494396.5