RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNRG (Homo sapiens)

Ensembl gene IDs: ENSG00000274047, ENSG00000275066

Ensembl transcript IDs: ENST00000610513.2, ENST00000611910.4, ENST00000612223.5, ENST00000612770.1, ENST00000613407.4, ENST00000614000.4, ENST00000614196.1, ENST00000614941.4, ENST00000616179.4, ENST00000618176.4, ENST00000618402.4, ENST00000618829.4, ENST00000619541.4, ENST00000619914.1, ENST00000619976.1, ENST00000620424.1, ENST00000621136.4, ENST00000621605.1, ENST00000622045.4, ENST00000631497.1, ENST00000631955.1, ENST00000632310.1, ENST00000632463.1, ENST00000632841.1, ENST00000633128.1, ENST00000633203.1, ENST00000633429.1, ENST00000633880.1, ENST00000633948.1

Found 1442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCAATTAGCAGCCTGCTTGCATTCCAGCTCCATGTGGAAGTGGTaGTGTCCAGGATGGAAGCGCCGAGGCCTCAGGAAAAGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: GQLAACLHSSSMWKW*CPGWKRRGLRKSLP
Trigger: TGGCAGGCTTTTCCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCACTTCCACATGGAGCTGGAATGCAAGCAGGCTGCTAATTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 90 bp GCCTGCTTGCATTCCAGCTCCATGTGGAAGTGGTGCTGTCCAGGATaGAAGCGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: ACLHSSSMWKWCCPG*KRRGLRKSLPKAVP
Trigger: TGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCACTTCCACATGGAGCTGGAATGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 90 bp CTGCCTCAGTCAGGAATGGCCAGAGACGGTATCATCGGGAGCGAGTaGGAAAAGCCTTTCTCTCCTCGGTGCCTCTCTGTGCATTCGGGC +
Preference number: 1 (lower is better)
Translates to: LPQSGMARDGIIGSE*EKPFSPRCLSVHSG
Trigger: GCCCGAATGCACAGAGAGGCACCGAGGAGAGAAAGGCTTTTCTCACTCGCTCCCGATGATACCGTCTCTGGCCATTCCTGACTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR GCA 90 bp TCGGGAGCGAGTGAGAAAAGCCTTTCTCTCCTCGGTGCCTCTCTGTaGATTCGGGCACGCAGAAGGTCAAGCAGAAGCCTCAGCAACAGC +
Preference number: 1 (lower is better)
Translates to: SGASEKSLSLLGASL*IRARRRSSRSLSNS
Trigger: GCTGTTGCTGAGGCTTCTGCTTGACCTTCTGCGTGCCCGAATGCACAGAGAGGCACCGAGGAGAGAAAGGCTTTTCTCACTCGCTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR GCA 90 bp CCTTGTGGTGGGCAAAAGCTCCAAAGGTGCCCATTCAGAGTGAGCTaGCTCAGTCAGGAATGGCCAGAGACGGTATCATCGGGAGCGAGT +
Preference number: 1 (lower is better)
Translates to: PCGGQKLQRCPFRVS*LSQEWPETVSSGAS
Trigger: ACTCGCTCCCGATGATACCGTCTCTGGCCATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTGCCCACCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 90 bp ACTAGCCTTGTGGTGGGCAAAAGCTCCAAAGGTGCCCATTCAGAGTaGGCTGCCTCAGTCAGGAATGGCCAGAGACGGTATCATCGGGAG +
Preference number: 1 (lower is better)
Translates to: TSLVVGKSSKGAHSE*AASVRNGQRRYHRE
Trigger: CTCCCGATGATACCGTCTCTGGCCATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTGCCCACCACAAGGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 90 bp GTCATCACCTACGCTGTCACGTGCAGCCTCAAACTCCTGGACTTGTaGTCTCCCGCCTCAGCTTACCTAGTAGCTGGGACCACGAATGTC +
Preference number: 1 (lower is better)
Translates to: VITYAVTCSLKLLDL*SPASAYLVAGTTNV
Trigger: GACATTCGTGGTCCCAGCTACTAGGTAAGCTGAGGCGGGAGATCACAAGTCCAGGAGTTTGAGGCTGCACGTGACAGCGTAGGTGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 90 bp AAGCTCCAAAGGTGCCCATTCAGAGTGAGCTGCCTCAGTCAGGAATaGCCAGAGACGGTATCATCGGGAGCGAGTGAGAAAAGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: KLQRCPFRVSCLSQE*PETVSSGASEKSLS
Trigger: AGAAAGGCTTTTCTCACTCGCTCCCGATGATACCGTCTCTGGCCATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACCTTTGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 90 bp AGCTGTCCCACTTGTGTTGTTAGAAACACCCCACTAGCCTTGTGGTaGGCAAAAGCTCCAAAGGTGCCCATTCAGAGTGAGCTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: SCPTCVVRNTPLALW*AKAPKVPIQSELPQ
Trigger: CTGAGGCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGTGTTTCTAACAACACAAGTGGGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR GCA 90 bp CCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: PCGVLHIDSGKRTVQ*SHSIYWSLSPRGVS
Trigger: TGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR GCA 90 bp GGAGTAGAGAACTGGTTCAGTTGTGACAACCAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACTGTCCAGGGGAGATGGGCAGAATCT +
Preference number: 1 (lower is better)
Translates to: GVENWFSCDNQVGKI*PHLPATVQGRWAES
Trigger: AGATTCTGCCCATCTCCCCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAACTGAACCAGTTCTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR GCA 90 bp ACTGGTTCAGTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTaGCTGCTACTGTCCAGGGGAGATGGGCAGAATCTTCTCCATAAA +
Preference number: 1 (lower is better)
Translates to: TGSVVTTKWVKSALT*LLLSRGDGQNLLHK
Trigger: TTTATGGAGAAGATTCTGCCCATCTCCCCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAACTGAACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR TCA 90 bp GTGCCCAGGCATGTTTTGGGAAAAAGTCTTGAGAGTGGACAGAAGTaGAGGGAAGGAGTAGAGAACTGGTTCAGTTGTGACAACCAAGTG +
Preference number: 1 (lower is better)
Translates to: VPRHVLGKSLESGQK*REGVENWFSCDNQV
Trigger: CACTTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTCCCTTCACTTCTGTCCACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 90 bp GATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGC +
Preference number: 1 (lower is better)
Translates to: DFIPLPFQILSEKTP*SQSLHAAEQVCSEG
Trigger: GCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR TCA 90 bp GCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGT +
Preference number: 1 (lower is better)
Translates to: ATAKRFHSTAFPNLV*ENSMVTVFACGRTG
Trigger: ACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 90 bp CAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: QSQAVLVPMQSSLEI*REATAKRFHSTAFP
Trigger: TGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 90 bp ATTCTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTAT +
Preference number: 1 (lower is better)
Translates to: ILLHRTVSVLDKNKH*LQAVAHSSPATVIY
Trigger: ATAGATTACCGTTGCGGGACTAGAATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR CCA 90 bp AGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTG +
Preference number: 1 (lower is better)
Translates to: RYCKVRQCWSLCSHL*KFGERPLQRDFIPL
Trigger: CAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 90 bp AAAAACATAGTCGACACACATCTTGCCCTGCATTCTGACATTTGCTaGAATGGTCTACAGCAGGCTACAATGCTCCCTTCTGAATGGCAA +
Preference number: 1 (lower is better)
Translates to: KNIVDTHLALHSDIC*NGLQQATMLPSEWQ
Trigger: TTGCCATTCAGAAGGGAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAGATGTGTGTCGACTATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 90 bp AGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAAGTAGAGATAAGTaGGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTT +
Preference number: 1 (lower is better)
Translates to: RKPWSVFQKILSRDK*ASFWCHVQFGWDNF
Trigger: AAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTATCTCTACTTAAGATTTTCTGAAATACGGACCACGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR GCA 90 bp GTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: VGPYAVIFGNLERGH*KEISFHCLSKSCLR
Trigger: TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 90 bp CAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATaGAAAAGCTGTAAGATGGAGCAAGACAGAATTTGTCCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: QQLFNENVPHLSWRT*KSCKMEQDRICPER
Trigger: CCTCTCAGGACAAATTCTGTCTTGCTCCATCTTACAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 90 bp ATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCCCTTCTGAATaGCAAATGTCTGAAAATGTCAGTTTATTAACTGTTCACAAAGGC +
Preference number: 1 (lower is better)
Translates to: ICWNGLQQATMLPSE*QMSENVSLLTVHKG
Trigger: GCCTTTGTGAACAGTTAATAAACTGACATTTTCAGACATTTGCCATTCAGAAGGGAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 2 (lower is better)
Translates to: SEQASGATCSLGGTILPEGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: FGNLERGHCKEISFHCLSAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACACCGGGAGGCGGAGGTTaGACTGAGCTGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: RKVLINGHSSSGVKRADTPGGGG*TELRLC
Trigger: GCACAATCTCAGCTCAGTGCAACCTCCGCCTCCCGG...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 2 (lower is better)
Translates to: LIHRIWASVKMSILHGCRGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 2 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 2 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGTTCACGGCTGCAGAGTaGCCAGGCATGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWFTAAE*PGMFWE
Trigger: TTCCCAAAACATGCCTGGGCACTCTGCAGCCGTGAA...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCTCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 2 (lower is better)
Translates to: PMQSSLEIWREATAKRFHGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGCATTCTTCACGGCTaGAGAGTGCCCAGGCATGTT +
Preference number: 2 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLSILHG*RVPRHV
Trigger: AACATGCCTGGGCACTCTGCAGCCGTGAAGAATGCT...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CAA 90 bp GCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: AKSGSVGPYAVIFGN*ERGHCKEISFHCLS
Trigger: GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 2 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCACCCCACTAGCCTTGTaGTGGGCAAAAGCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: KRADTMHSMEISNLGYSFTPLAL*WAKAPK
Trigger: CTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGT...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 90 bp GAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTaGTCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAA +
Preference number: 2 (lower is better)
Translates to: ERPLQRDFIPLPFQI*SEKTPWSQSLHAAE
Trigger: TTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 2 (lower is better)
Translates to: SEQASGATCSLGGTILPEKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 2 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACT +
Preference number: 2 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRQVGKI*PHLPAT
Trigger: AGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 2 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 2 (lower is better)
Translates to: RKVLINGHSSSGVKRADTKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 90 bp CAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTaGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACT +
Preference number: 2 (lower is better)
Translates to: QILQSQAVLVPMQSS*EIWREATAKRFHST
Trigger: AGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 2 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 2 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR TCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAGTCATGGTTCTGTTATaGAATTTAGGCCAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GVTKPTILGKENGDYTKEVMVLL*NLGQAQ
Trigger: CTGCGCCTGGCCTAAATTTCATAACAGAACCATGAC...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTAGCATTCTTCACGGCTaGAGAGTGCCCAGGCATGTT +
Preference number: 2 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTSILHG*RVPRHV
Trigger: AACATGCCTGGGCACTCTGCAGCCGTGAAGAATGCT...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCGAAGGAGTAGAGAACTaGTTCAGTTGTGACAACCAA +
Preference number: 2 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCEGVEN*FSCDNQ
Trigger: TTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTC...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGACATTCCAGCTCCATGTaGAAGTGGTGCTGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: HGKYPHISSTSSISSMSRHSSSM*KWCCPG
Trigger: TCCTGGACAGCACCACTTCCACATGGAGCTGGAATG...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAGTGTCCCACACTCCTTaGATCCCTATTGGTGGCATC +
Preference number: 2 (lower is better)
Translates to: HGKYPHISSTSSISSMSRVSHTP*IPIGGI
Trigger: GATGCCACCAATAGGGATCCAAGGAGTGTGGGACAC...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR TCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 2 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 2 (lower is better)
Translates to: AAASSSLDQESRGPYFRKKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 2 (lower is better)
Translates to: NTAAASSSLDQESRGPYFKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAATCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: LIHRIWASVKMSILHGCRSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 2 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 2 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 2 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTCCGGAGTTCAAGCCTaGCCAACATGGAGAAACCTT +
Preference number: 2 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKSGVQA*PTWRNL
Trigger: AAGGTTTCTCCATGTTGGCCAGGCTTGAACTCCGGA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGATTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 2 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQASQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGLERGH*KEISFH
Trigger: GTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 2 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAATCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAG +
Preference number: 2 (lower is better)
Translates to: GVTKPTILGKENGDYTKESSLEI*REATAK
Trigger: CTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGA...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCG +
Preference number: 2 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYSEKTP*SQSLHA
Trigger: CGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 2 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAACTGGTCTCTAACTCCTaGGAAACATTCTTATTGCAA +
Preference number: 2 (lower is better)
Translates to: GVTKPTILGKENGDYTKELVSNS*ETFLLQ
Trigger: TTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAG...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 2 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 2 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTTTCTCACAGATACTaGAAAGTCAGGCAGTGTTGG +
Preference number: 2 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYFSHRY*KVRQCW
Trigger: CCAACACTGCCTGACTTTGCAGTATCTGTGAGAAAA...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACTAATACACAGGATTTaGGCCTCTGTCAAAATGAGC +
Preference number: 2 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLIHRI*ASVKMS
Trigger: GCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTLCSHL*KFGERP
Trigger: TGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTTATCTGAGGCATTCTaGAATTTCTCAGGAATAGAA +
Preference number: 2 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKLSEAF*NFSGIE
Trigger: TTCTATTCCTGAGAAATTCCAGAATGCCTCAGATAA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp TTAGCAGCCTGCTTGCATTCCAGCTCCATGTGGAAGTaGTGCTGTCCAGGATGGAAGCGCCGAGGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: LAACLHSSSMWK*CCPGWKRRGLR
Trigger: CCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCACTTCCACATGGAGCTGGAATGCAAGCAGGCTGCTAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp GGCCAATTAGCAGCCTGCTTGCATTCCAGCTCCATGTaGAAGTGGTGCTGTCCAGGATGGAAGCGCCGAGGC +
Preference number: 3 (lower is better)
Translates to: GQLAACLHSSSM*KWCCPGWKRRG
Trigger: GCCTCGGCGCTTCCATCCTGGACAGCACCACTTCCACATGGAGCTGGAATGCAAGCAGGCTGCTAATTGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 3 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR TCA 72 bp TACGCTGTCACGTGCAGCCTCAAACTCCTGGACTTGTaGTCTCCCGCCTCAGCTTACCTAGTAGCTGGGACC +
Preference number: 3 (lower is better)
Translates to: YAVTCSLKLLDL*SPASAYLVAGT
Trigger: GGTCCCAGCTACTAGGTAAGCTGAGGCGGGAGATCACAAGTCCAGGAGTTTGAGGCTGCACGTGACAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp CATTCCAGCTCCATGTGGAAGTGGTGCTGTCCAGGATaGAAGCGCCGAGGCCTCAGGAAAAGCCTGCCAAAA +
Preference number: 3 (lower is better)
Translates to: HSSSMWKWCCPG*KRRGLRKSLPK
Trigger: TTTTGGCAGGCTTTTCCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCACTTCCACATGGAGCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 72 bp TCAGGAATGGCCAGAGACGGTATCATCGGGAGCGAGTaGGAAAAGCCTTTCTCTCCTCGGTGCCTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: SGMARDGIIGSE*EKPFSPRCLSV
Trigger: CACAGAGAGGCACCGAGGAGAGAAAGGCTTTTCTCACTCGCTCCCGATGATACCGTCTCTGGCCATTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR GCA 72 bp GGGCAAAAGCTCCAAAGGTGCCCATTCAGAGTGAGCTaGCTCAGTCAGGAATGGCCAGAGACGGTATCATCG +
Preference number: 3 (lower is better)
Translates to: GQKLQRCPFRVS*LSQEWPETVSS
Trigger: CGATGATACCGTCTCTGGCCATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGCGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 3 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 3 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR GCA 72 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTaGCTGCTACTGTCCAGGGGAGATGGGCAGAATCTT +
Preference number: 3 (lower is better)
Translates to: VVTTKWVKSALT*LLLSRGDGQNL
Trigger: AAGATTCTGCCCATCTCCCCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCCGTGTCCCACACTCCTaGGATCCCTATTGGTGGCAT +
Preference number: 3 (lower is better)
Translates to: LALHSDICWNGLQQATMLRVPHS*DPYWWH
Trigger: ATGCCACCAATAGGGATCCAAGGAGTGTGGGACACG...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp CACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCATTCTAGTCCCGCAACG +
Preference number: 3 (lower is better)
Translates to: HRTVSVLDKNKH*LQAVAHSSPAT
Trigger: CGTTGCGGGACTAGAATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGACGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 3 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 3 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR TCA 72 bp CATCTGCTGAATTTTCCTGTGGCACCTCCCAAGGAGTaGCTAAGCCTACCATCCTTGGTAAGGAAAATGGGG +
Preference number: 3 (lower is better)
Translates to: HLLNFPVAPPKE*LSLPSLVRKMG
Trigger: CCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCCTTGGGAGGTGCCACAGGAAAATTCAGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp ACTTGTGTTGTTAGAAACACCCCACTAGCCTTGTGGTaGGCAAAAGCTCCAAAGGTGCCCATTCAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: TCVVRNTPLALW*AKAPKVPIQSE
Trigger: CTCACTCTGAATGGGCACCTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGTGTTTCTAACAACACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 3 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACCATGGTCACAGTCTTaGCATGCGGCAGAACAGGTT +
Preference number: 3 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKPWSQS*HAAEQV
Trigger: AACCTGTTCTGCCGCATGCAAAGACTGTGACCATGG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR GCA 72 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGGTCCCTGTCACCCCGT +
Preference number: 3 (lower is better)
Translates to: VLHIDSGKRTVQ*SHSIYWSLSPR
Trigger: ACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR GCA 72 bp ATAGTCGACACACATCTTGCCCTGCATTCTGACATTTaGTGGAATGGTCTACAGCAGGCTACAATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: IVDTHLALHSDI*WNGLQQATMLP
Trigger: AGGGAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAGATGTGTGTCGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCCCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 3 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 3 (lower is better)
Translates to: PMQSSLEIWREATAKRFHLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 3 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 72 bp GCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAGAGATTTCATTCCACT +
Preference number: 3 (lower is better)
Translates to: AVLVPMQSSLEI*REATAKRFHST
Trigger: AGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR CCA 72 bp AAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTC +
Preference number: 3 (lower is better)
Translates to: KVRQCWSLCSHL*KFGERPLQRDF
Trigger: GAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 3 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 3 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 3 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCTAAGCCTACCATCCTaGGTAAGGAAAATGGGGATT +
Preference number: 3 (lower is better)
Translates to: KRADTMHSMEISNLGYSFLSLPS*VRKMGI
Trigger: AATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAG...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR TCA 72 bp AAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACAGTCTTTGCATGCGGC +
Preference number: 3 (lower is better)
Translates to: KRFHSTAFPNLV*ENSMVTVFACG
Trigger: GCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR GCA 72 bp CTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATaGTCCCTTCTGAATGGCAAATGTCTGAAAATGTCA +
Preference number: 3 (lower is better)
Translates to: LTFAGMVYSRLQ*SLLNGKCLKMS
Trigger: TGACATTTTCAGACATTTGCCATTCAGAAGGGAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp CAGCGCAACCGTGTCCCACACTCCTTGGATCCCTATTaGTGGCATCTAATTAAACATTTCAAGTATTCAAGA +
Preference number: 3 (lower is better)
Translates to: QRNRVPHSLDPY*WHLIKHFKYSR
Trigger: TCTTGAATACTTGAAATGTTTAATTAGATGCCACCAATAGGGATCCAAGGAGTGTGGGACACGGTTGCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGCAAAGTCAGGCAGTGTaGGTCCCTATGCAGTCATCT +
Preference number: 3 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKQSQAV*VPMQSS
Trigger: AGATGACTGCATAGGGACCAACACTGCCTGACTTTG...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp CGCAACCGTGTCCCACACTCCTTGGATCCCTATTGGTaGCATCTAATTAAACATTTCAAGTATTCAAGAGAT +
Preference number: 3 (lower is better)
Translates to: RNRVPHSLDPYW*HLIKHFKYSRD
Trigger: ATCTCTTGAATACTTGAAATGTTTAATTAGATGCCACCAATAGGGATCCAAGGAGTGTGGGACACGGTTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR GCA 72 bp TATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCACTGCCTTTCCAAATCT +
Preference number: 3 (lower is better)
Translates to: YAVIFGNLERGH*KEISFHCLSKS
Trigger: AGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR GCA 72 bp ACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTaGTGTCATGGTTCTGTTATGAAATTTAGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: TPGKHSYCKGRF*CHGSVMKFRPG
Trigger: GCCTGGCCTAAATTTCATAACAGAACCATGACAGCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 3 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
3UTR-3UTR CAA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAA +
Preference number: 3 (lower is better)
Translates to: HGKYPHISSTSSISSMSRVIFGN*ERGHCK
Trigger: TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGAC...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CCA 72 bp TGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATCTTAAGTAGAGATAAG +
Preference number: 3 (lower is better)
Translates to: CSSKFFLRSRKP*SVFQKILSRDK
Trigger: CTTATCTCTACTTAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR CCA 72 bp TTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATaGAAAAGCTGTAAGATGGAGCAAGACAGAATTTGT +
Preference number: 3 (lower is better)
Translates to: FNENVPHLSWRT*KSCKMEQDRIC
Trigger: ACAAATTCTGTCTTGCTCCATCTTACAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGCTGGCTGTCCAAGGCTaGGGGGCATGGAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELLAVQG*GAWSPQ
Trigger: CTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAG...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGACTCCTGACCTCGGGTaGTCCACCCGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQTPDLG*STRLGL
Trigger: GAGGCCGAGCCGGGTGGATCACCCGAGGTCAGGAGT...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCACTGGACGCTGGGCTaGGACACGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVHWTLG*DTWPPG
Trigger: GCCAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRCTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELCTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTGARRT*RYHSWL
Trigger: CAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGCCGCAGCGCCATCTTaGTCCCGACCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLAAAPS*SRPAAA
Trigger: GGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELTRTSS*PQRHLA
Trigger: AGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGGACACGTGGCCTCCTaGCTCCGTTCAGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGGHVAS*LRSAVG
Trigger: GCCTACGGCTGAACGGAGCCAGGAGGCCACGTGTCC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGGACACGTGGCCTCCTaGCTCCGTTCAGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQGHVAS*LRSAVG
Trigger: GCCTACGGCTGAACGGAGCCAGGAGGCCACGTGTCC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCACTGGACGCTGGGCTaGGACACGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGHWTLG*DTWPPG
Trigger: GCCAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAACTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPELPTCR*LRRRHL
Trigger: AAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAG...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAAGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGGACACGTGGCCTCCTaGCTCCGTTCAGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPGHVAS*LRSAVG
Trigger: GCCTACGGCTGAACGGAGCCAGGAGGCCACGTGTCC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTGGTGCTGTCCAGGATaGAAGCGCCGAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGWCCPG*KRRGLR
Trigger: CCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGCTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGGARRT*RYHSWL
Trigger: CAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCTGGCTGTCCAAGGCTaGGGGGCATGGAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVLAVQG*GAWSPQ
Trigger: CTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGGTGCCCATTCAGAGTaGGCTGCCTCAGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELGAHSE*AASVRN
Trigger: ATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGCACCTCCCAAGGAGTaGCTAAGCCTACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRAPPKE*LSLPSL
Trigger: CAAGGATGGTAGGCTTAGTCACTCCTTGGGAGGTGC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGCCGCAGCGCCATCTTaGTCCCGACCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPAAAPS*SRPAAA
Trigger: GGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGTRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCTCGGTGCCTCTCTGTaGATTCGGGCACGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQLGASL*IRARRR
Trigger: CCTTCTGCGTGCCCGAATGCACAGAGAGGCACCGAG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGTRTSS*PQRHLA
Trigger: AGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRLLLHV*SVLWAW
Trigger: CCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRSKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPLERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGCTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGCCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCTGGCTGTCCAAGGCTaGGGGGCATGGAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPLAVQG*GAWSPQ
Trigger: CTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGATCCACTTCCTGCTaGGAGGACAAATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTGSTSC*EDKWRE
Trigger: CTCTCTCCATTTGTCCTCTCAGCAGGAAGTGGATCC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGGATCCACTTCCTGCTaGAGCAGGAGGATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGGSTSC*SRRMLA
Trigger: GGCCAGCATCCTCCTGCTGCAGCAGGAAGTGGATCC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616179.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAGCATCAGGACTCATTaGAGGAACGCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTSIRTH*RNAPLC
Trigger: ACACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGGCCAATTAGCAGCCTaGTTGCATTCCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELGQLAA*LHSSSM
Trigger: CATGGAGCTGGAATGCAAGCAGGCTGCTAATTGGCC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTATCTTGCTCCCGACCTaGCGCTGCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPILLPT*RCLRRR
Trigger: GCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGAT...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAACCGGGAGGCGGAGGTTaGACTGAGCTGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEPGGGG*TELRLC
Trigger: GCACAATCTCAGCTCAGTGCAACCTCCGCCTCCCGG...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAGGCATTCCCGCTGCTaGCATTGGTCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTRHSRC*HWSHWY
Trigger: ATACCAATGGGACCAATGCCAGCAGCGGGAATGCCT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGAGGCATTCCCGCTGCTaGCATTGGTCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELRHSRC*HWSHWY
Trigger: ATACCAATGGGACCAATGCCAGCAGCGGGAATGCCT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKREARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCTCCAAGGAAGGGCCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLQGRA*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGCCCTTCCTTGGAG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGTGTCCCACACTCCTTaGATCCCTATTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELVSHTP*IPIGGI
Trigger: GATGCCACCAATAGGGATCCAAGGAGTGTGGGACAC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACAACCTCCGCCTCTCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRQPPPL*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGAGAGGCGGAGGTTG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGTGGCGAGTGACATaGAGCCGATTAGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTVWRVT*SRLGYS
Trigger: GGAATAACCTAATCGGCTTCATGTCACTCGCCACAC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGAGAGTTTTCTGCCCTaGGTTGCATCATCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELESFLP*VASSLS
Trigger: AGACAGGGATGATGCAACTCAGGGCAGAAAACTCTC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTGGGGTGAAGCGGGCTaGCACAATGCACAGTATGGA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVWGEAG*HNAQYG
Trigger: TCCATACTGTGCATTGTGTCAGCCCGCTTCACCCCA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGAAACTGTCTGTTTCTaGGTTGAATGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELETVCF*VECPAP
Trigger: AGGAGCCGGGCATTCAACTCAGAAACAGACAGTTTC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVPPCQH*CHQWKG
Trigger: TCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGPPCQH*CHQWKG
Trigger: TCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPTRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRLPTCR*LRRRHL
Trigger: AAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSLPTCR*LRRRHL
Trigger: AAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTT +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALPTCR*LRRRHL
Trigger: AAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRSVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPSVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAAATACTCCCACACCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTKYSHT*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGTGTGGGAGTATTT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGSKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVSKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVCCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGTGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQCCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGCAAGAGCTGGGAAGGTaGTCTCTGGAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELQELGR*SLEEHL
Trigger: AAGATGCTCTTCCAGAGACCACCTTCCCAGCTCTTG...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGGACACGTGGCCTCCTaGCTCCGTTCAGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCGHVAS*LRSAVG
Trigger: GCCTACGGCTGAACGGAGCCAGGAGGCCACGTGTCC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCCTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSLERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCTGCCTCAGTCAGGAATaGCCAGAGACGGTATCATCG +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPCLSQE*PETVSS
Trigger: CGATGATACCGTCTCTGGCCATTCCTGACTGAGGCA...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCTGAGCAGGATCCTGTaGGGGAAATACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPLSRIL*GKYSHT
Trigger: GGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCGTGTGGCGAGTGACATaGAGCCGATTAGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPVWRVT*SRLGYS
Trigger: GGAATAACCTAATCGGCTTCATGTCACTCGCCACAC...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCTGGCTGTCCAAGGCTaGGGGGCATGGAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSLAVQG*GAWSPQ
Trigger: CTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGTCATGGTTCTGTTATaGAATTTAGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELVMVLL*NLGQAQ
Trigger: CTGCGCCTGGCCTAAATTTCATAACAGAACCATGAC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCTGTTGACATCTGCTaGATTTTCCTGTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELSVDIC*IFLWHL
Trigger: GAGGTGCCACAGGAAAATTCAGCAGATGTCAACAGA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGCTGTGCTGCCCACGTTaGTGGTTAGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRLCCPR*WLEEQD
Trigger: GTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAG...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGGATCCACTTCCTGCTaGAGCAGGAGGATGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFGSTSC*SRRMLA
Trigger: GGCCAGCATCCTCCTGCTGCAGCAGGAAGTGGATCC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616179.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRLPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELAGVSH*TLQWLL
Trigger: TAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPETRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGGCCAATTAGCAGCCTaGTTGCATTCCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQGQLAA*LHSSSM
Trigger: CATGGAGCTGGAATGCAAGCAGGCTGCTAATTGGCC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGCGATCTCGGCTCACTaGAACCTCCGCCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTAISAH*NLRLSG
Trigger: ACCAGAGAGGCGGAGGTTGCAGTGAGCCGAGATCGC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCATCTTGCTCCCGACCTaGCGCTGCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSILLPT*RCLRRR
Trigger: GCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGAT...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGGGTCTTTACCATCATaGCCAGGGCTGGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGGSLPS*PGLVSN
Trigger: GTTAGAGACCAGCCCTGGGCATGATGGTAAAGACCC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGLLLHV*SVLWAW
Trigger: CCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCCACTGCTGCCACCAATaGAAGGGAGATCTAAGGACT +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPHCCHQ*KGDLRT
Trigger: AGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTG...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRSFSNC*SFSLHT
Trigger: AGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVEARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCCTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGAGAGTTTTCTGCCCTaGGTTGCATCATCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVESFLP*VASSLS
Trigger: AGACAGGGATGATGCAACTCAGGGCAGAAAACTCTC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGGGCCTCTGTCAAAATaGGCATTCTTCACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPGPLSK*AFFTAA
Trigger: TGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGGTGCCCATTCAGAGTaGGCTGCCTCAGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPGAHSE*AASVRN
Trigger: ATTCCTGACTGAGGCAGCTCACTCTGAATGGGCACC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGCACCTCCCAAGGAGTaGCTAAGCCTACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPAPPKE*LSLPSL
Trigger: CAAGGATGGTAGGCTTAGTCACTCCTTGGGAGGTGC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACACTGGTCTTGAACTCCTaGCCTCGGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTLVLNS*PRVIHP
Trigger: CGGGTGGATCACCCGAGGTCAGGAGTTCAAGACCAG...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGAGCCGCAGCGCCATCTTaGTCCCGACCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGAAAPS*SRPAAA
Trigger: GGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGC...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGACCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTGTGCTGCCCACGTTaGTGGTTAGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLCCPR*WLEEQD
Trigger: GTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPESVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVSVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAAATACTCCCACACCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGKYSHT*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGTGTGGGAGTATTT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCACTGCTGCCACCAATaGAAGGGAGATCTAAGGACT +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVHCCHQ*KGDLRT
Trigger: AGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGACTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRLERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPEARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGAGCTCCATGTGGAAGTaGTGCTGTCCAGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGSSMWK*CCPGWK
Trigger: CTTCCATCCTGGACAGCACCACTTCCACATGGAGCT...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCATTCCAGCTCCATGTaGAAGTGGTGCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGHSSSM*KWCCPG
Trigger: TCCTGGACAGCACCACTTCCACATGGAGCTGGAATG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELSEKTP*SQSLHA
Trigger: CGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAGGACACGGGGCTCCTaGCTGACAAGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTRTRGS*LTRRAE
Trigger: CTCAGCTCTTCTTGTCAGCCAGGAGCCCCGTGTCCT...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAGGACACGGGGCTCCTaGCTGACAAGAAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFRTRGS*LTRRAE
Trigger: CTCAGCTCTTCTTGTCAGCCAGGAGCCCCGTGTCCT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCTGAGCAGGATCCTGTaGGGGAAATACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVLSRIL*GKYSHT
Trigger: GGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGTATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGYWNGL*KAAPKL
Trigger: CAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATA...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAATTCAAGCAGTGGGGTaGAGCGGGCTGACACAATGC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEIQAVG*SGLTQC
Trigger: GCATTGTGTCAGCCCGCTTCACCCCACTGCTTGAAT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCCTGGTCTTGAACTCCTaGCCTCGGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCLVLNS*PRVIHP
Trigger: CGGGTGGATCACCCGAGGTCAGGAGTTCAAGACCAG...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGCCGCAGCGCCATCTTaGTCCCGACCTGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLAAAPS*SRPAAA
Trigger: GGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTPPCQH*CHQWKG
Trigger: TCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGAGVSH*TLQWLL
Trigger: TAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGTGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTSSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKREAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAACACTGCTGCCACCAATaGAAGGGAGATCTAAGGACT +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEHCCHQ*KGDLRT
Trigger: AGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTG...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAAAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGGACACGTGGCCTCCTaGCTCCGTTCAGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHGHVAS*LRSAVG
Trigger: GCCTACGGCTGAACGGAGCCAGGAGGCCACGTGTCC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCACTGGACGCTGGGCTaGGACACGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIHWTLG*DTWPPG
Trigger: GCCAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTG...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRLERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPPAPHA*LPCTLQ
Trigger: TTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAA +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGPAPHA*LPCTLQ
Trigger: TTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTGCAGCTCCACCCACTaGTCCAACAAGGTTAATGCC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLCSSTH*SNKVNA
Trigger: GGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCTAATACACAGGATTTaGGCCTCTGTCAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTLIHRI*ASVKMS
Trigger: GCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTCCGGAGTTCAAGCCTaGCCAACATGGAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPSGVQA*PTWRNL
Trigger: AAGGTTTCTCCATGTTGGCCAGGCTTGAACTCCGGA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACACTGAGCAGGATCCTGTaGGGGAAATACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTLSRIL*GKYSHT
Trigger: GGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAG...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRDLEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTC...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLYWNGL*KAAPKL
Trigger: CAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQACTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFCTCLG*RAGRAS
Trigger: AGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGTGTGGCGAGTGACATaGAGCCGATTAGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPVWRVT*SRLGYS
Trigger: GGAATAACCTAATCGGCTTCATGTCACTCGCCACAC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCTGGCTGTCCAAGGCTaGGGGGCATGGAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYLAVQG*GAWSPQ
Trigger: CTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCTGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCGCTGACAAGAAGAGCTaGGGTGAAGCTGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVADKKS*GEAECS
Trigger: GCTGCATTCAGCTTCACCTCAGCTCTTCTTGTCAGC...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATGGGGTGAAGCGGGCTaGCACAATGCACAGTATGGA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSWGEAG*HNAQYG
Trigger: TCCATACTGTGCATTGTGTCAGCCCGCTTCACCCCA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAACTCCTGACCTCGGGTaGTCCACCCGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQETPDLG*STRLGL
Trigger: GAGGCCGAGCCGGGTGGATCACCCGAGGTCAGGAGT...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAAATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLCSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTRSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRLSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACTGTGCTGCCCACGTTaGTGGTTAGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSLCCPR*WLEEQD
Trigger: GTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAG...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCTGTGCTGCCCACGTTaGTGGTTAGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPLCCPR*WLEEQD
Trigger: GTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGCTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRLPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAGCATCAGGACTCATTaGAGGAACGCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPESIRTH*RNAPLC
Trigger: ACACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGCTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGATCTTGCTCCCGACCTaGCGCTGCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKILLPT*RCLRRR
Trigger: GCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGAT...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACATCTTGCTCCCGACCTaGCGCTGCCTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYILLPT*RCLRRR
Trigger: GCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGAT...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCAGCATTCTTCACGGCTaGAGAGTGCCCAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSSILHG*RVPRHV
Trigger: AACATGCCTGGGCACTCTGCAGCCGTGAAGAATGCT...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLERGH*KEISFH
Trigger: GTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCTCGGTGCCTCTCTGTaGATTCGGGCACGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSLGASL*IRARRR
Trigger: CCTTCTGCGTGCCCGAATGCACAGAGAGGCACCGAG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGACACACATCTTGCCCTaGATTCTGACATTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQTHILP*ILTFAG
Trigger: TCCAGCAAATGTCAGAATGCAGGGCAAGATGTGTGT...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGGCATTCCCGCTGCTaGCATTGGTCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVRHSRC*HWSHWY
Trigger: ATACCAATGGGACCAATGCCAGCAGCGGGAATGCCT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGCTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWLLLHV*SVLWAW
Trigger: CCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCACCAGGATCTCCAGGTaGAACAGTATTTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGTRISR*NSIFRG
Trigger: TCCTCTGAAAATACTGTTCCACCTGGAGATCCTGGT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAAGAGCTGGGAAGGTaGTCTCTGGAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPQELGR*SLEEHL
Trigger: AAGATGCTCTTCCAGAGACCACCTTCCCAGCTCTTG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCACTGGACGCTGGGCTaGGACACGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLHWTLG*DTWPPG
Trigger: GCCAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAACACTGGACGCTGGGCTaGGACACGTGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKHWTLG*DTWPPG
Trigger: GCCAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTG...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATGCAGCTCCACCCACTaGTCCAACAAGGTTAATGCC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPECSSTH*SNKVNA
Trigger: GGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCTGCCTCTGCAGTGGTaGTACCACTTACACATCCAT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLLPLQW*YHLHIH
Trigger: ATGGATGTGTAAGTGGTACCACCACTGCAGAGGCAG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCCCACTAGCCTTGTGGTaGGCAAAAGCTCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFPLALW*AKAPKV
Trigger: CACCTTTGGAGCTTTTGCCCACCACAAGGCTAGTGG...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 72 bp AGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGGGGTGTCACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: REANCAVLAFYL*VPVTPWGVTEK
Trigger: TTTTTCTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
3UTR CAA 72 bp TGTCCCACTTGTGTTGTTAGAAACACCCCACTAGCCTaGTGGTGGGCAAAAGCTCCAAAGGTGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: CPTCVVRNTPLA*WWAKAPKVPIQ
Trigger: CTGAATGGGCACCTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGTGTTTCTAACAACACAAGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGCTGAGCAGGATCCTGTaGGGGAAATACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLLSRIL*GKYSHT
Trigger: GGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAG...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPSIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGATCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATCGTTCGGGGTTTCTTaGGAGGCACCACTGGACGCT +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRSFGVS*EAPLDA
Trigger: AGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGAGAGTTTTCTGCCCTaGGTTGCATCATCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFESFLP*VASSLS
Trigger: AGACAGGGATGATGCAACTCAGGGCAGAAAACTCTC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTCTGTTGACATCTGCTaGATTTTCCTGTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLSVDIC*IFLWHL
Trigger: GAGGTGCCACAGGAAAATTCAGCAGATGTCAACAGA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGGGTCTTATCCCACCTaGAACAGGAAACATGAAGCC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEGSYPT*NRKHEA
Trigger: GGCTTCATGTTTCCTGTTGCAGGTGGGATAAGACCC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAACCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPECSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFEPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAAGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTTGCCAACACTGCTaGCACCAATGGAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSPCQHC*HQWKGD
Trigger: ATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGG...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAAGCATCAGGACTCATTaGAGGAACGCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTSIRTH*RNAPLC
Trigger: ACACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCT...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYTRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTTCACGGCTGCAGAGTaGCCAGGCATGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCFTAAE*PGMFWE
Trigger: TTCCCAAAACATGCCTGGGCACTCTGCAGCCGTGAA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGCGGCAGAACAGGTTTaGAGCGAAGGCTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEAAEQV*SEGSRG
Trigger: CCCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTTTCTCACAGATACTaGAAAGTCAGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFSHRY*KVRQCW
Trigger: CCAACACTGCCTGACTTTGCAGTATCTGTGAGAAAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCAAAAGCTCCAAAGGTaGCCATTCAGAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVQKLQR*PFRVSC
Trigger: GCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAGCCTCAGGAAAAGCCTaGCAAAAGCTGTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTASGKA*QKLSHL
Trigger: CAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGC...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAAGGCATTCCCGCTGCTaGCATTGGTCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSRHSRC*HWSHWY
Trigger: ATACCAATGGGACCAATGCCAGCAGCGGGAATGCCT...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGSVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGAPSLAVFFISIQGSELFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAAATACTCCCACACCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEKYSHT*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGTGTGGGAGTATTT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCAAATACTCCCACACCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSKYSHT*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGTGTGGGAGTATTT...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618176.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLCCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCCACTGCTGCCACCAATaGAAGGGAGATCTAAGGACT +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFHCCHQ*KGDLRT
Trigger: AGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTG...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAACAAGAGCTGGGAAGGTaGTCTCTGGAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEQELGR*SLEEHL
Trigger: AAGATGCTCTTCCAGAGACCACCTTCCCAGCTCTTG...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACTCCAAGGAAGGGCCTaGTTTCTTGGGGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALQGRA*FLGVRC
Trigger: GCATCGCACCCCAAGAAACCAGGCCCTTCCTTGGAG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGGGCCTAGGGCTTTGTaGCCAACTTCAGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLGPRAL*PTSEVF
Trigger: AAATACTTCTGAAGTTGGCCACAAAGCCCTAGGCCC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPESHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAATGCCCAGGCATGTTTTaGGAAAAAGTCTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLECPGMF*EKVLRV
Trigger: CACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCA...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTGCCCAGGCATGTTTTaGGAAAAAGTCTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRCPGMF*EKVLRV
Trigger: CACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGTTCCACACCTTTCTTaGAGAACATGGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVVPHLS*RTWKSC
Trigger: ACAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAAC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATTTATTTCCTCGGCCTaGCAAGGGGAGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEFISSA*QGEGFS
Trigger: TGAAAAGCCCTCCCCTTGCCAGGCCGAGGAAATAAA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 72 bp GAGATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCTGAAGTCCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: EISEQASGATCS*GGTILPEVLQT
Trigger: AGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAACTGAGCAGGATCCTGTaGGGGAAATACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKLSRIL*GKYSHT
Trigger: GGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAG...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGCCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVDLEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGTGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQCAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGTGTGGCGAGTGACATaGAGCCGATTAGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCVWRVT*SRLGYS
Trigger: GGAATAACCTAATCGGCTTCATGTCACTCGCCACAC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSLVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGGGCCTCTGTCAAAATaGGCATTCTTCACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKGPLSK*AFFTAA
Trigger: TGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGAAACTGTCTGTTTCTaGGTTGAATGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCETVCF*VECPAP
Trigger: AGGAGCCGGGCATTCAACTCAGAAACAGACAGTTTC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGATTCCCATAATGCCTTaGATATTAGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQIPIMP*ILGCMT
Trigger: TGTCATGCAGCCTAATATGCAAGGCATTATGGGAAT...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKGLEDA*PGRVLV
Trigger: GACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPCSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCTCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPSNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: FPPKTVVIQTRALKPLYIPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAACCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKEPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGRSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACTGTGCTGCCCACGTTaGTGGTTAGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGLCCPR*WLEEQD
Trigger: GTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFAGVSH*TLQWLL
Trigger: TAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFITRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATTCACGGCTGCAGAGTaGCCAGGCATGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRFTAAE*PGMFWE
Trigger: TTCCCAAAACATGCCTGGGCACTCTGCAGCCGTGAA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCAGTGTTGGTCCCTATaGAGTCATCTTTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQQCWSL*SHLWKF
Trigger: AAATTTCCAAAGATGACTGCATAGGGACCAACACTG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFITRTSS*PQRHLA
Trigger: AGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGT...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCCTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFLLLHV*SVLWAW
Trigger: CCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSLGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQASKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSSKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSREAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPEAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGEAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQACCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCTGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQELERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACTTGAGAGGCACCACTaGACGCTGGGCTGGGACACG +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLERHH*TLGWDT
Trigger: CGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAGCTCCACACGCTTaGTTACCCTGTACACTTCAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSPAPHA*LPCTLQ
Trigger: TTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGG...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVSFSNC*SFSLHT
Trigger: AGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGA...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGGTGCTGTCCAGGATaGAAGCGCCGAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPWCCPG*KRRGLR
Trigger: CCTGAGGCCTCGGCGCTTCCATCCTGGACAGCACCA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCTAATACACAGGATTTaGGCCTCTGTCAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGLIHRI*ASVKMS
Trigger: GCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAACCCCACTAGCCTTGTaGTGGGCAAAAGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRTPLAL*WAKAPK
Trigger: CTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGT...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCTCCTTGGATCCCTATTaGTGGCATCTAATTAAACAT +
Preference number: 4 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPSLDPY*WHLIKH
Trigger: ATGTTTAATTAGATGCCACCAATAGGGATCCAAGGA...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGTGTCCCACACTCCTTaGATCCCTATTGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKVSHTP*IPIGGI
Trigger: GATGCCACCAATAGGGATCCAAGGAGTGTGGGACAC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGATGCTCCCTTCTGAATaGCAAATGTCTGAAAATGTC +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVMLPSE*QMSENV
Trigger: GACATTTTCAGACATTTGCCATTCAGAAGGGAGCAT...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCATTCTGACATTTGCTaGAATGGTCTACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPHSDIC*NGLQQA
Trigger: AGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGDLEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPSIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLYWNGL*KAAPKL
Trigger: CAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTGARRT*RYHSWL
Trigger: CAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLGARRT*RYHSWL
Trigger: CAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILGARRT*RYHSWL
Trigger: CAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGGGCCTCTGTCAAAATaGGCATTCTTCACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKGPLSK*AFFTAA
Trigger: TGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCATCATCGGGAGCGAGTaGGAAAAGCCTTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSIIGSE*EKPFSP
Trigger: AGGAGAGAAAGGCTTTTCTCACTCGCTCCCGATGAT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGCTGACAAGAAGAGCTaGGGTGAAGCTGAATGCAGC +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFADKKS*GEAECS
Trigger: GCTGCATTCAGCTTCACCTCAGCTCTTCTTGTCAGC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGAGAGGACTTGTCAGCTaGAATTCCTTTAAACACAGC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLRGLVS*NSFKHS
Trigger: GCTGTGTTTAAAGGAATTGCAGCTGACAAGTCCTCT...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPRSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRRSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLTRSLG*SSTHWS
Trigger: GGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGCGATCTCGGCTCACTaGAACCTCCGCCTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKAISAH*NLRLSG
Trigger: ACCAGAGAGGCGGAGGTTGCAGTGAGCCGAGATCGC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAATGTAAGTGTGCTCACTaGAAAATTGCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLECKCAH*KIATVA
Trigger: AGCTACAGTAGCAATTTTGCAGTGAGCACACTTACA...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTTTTACCTGAAGTCCTaGAGACTGGCCGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSFYLKS*RLAVGM
Trigger: CATCCCCACGGCCAGTCTGCAGGACTTCAGGTAAAA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAGCTTCTGGTGCCACGTaGAGTTTGGGTGGGACAATT +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRASGAT*SLGGTI
Trigger: AATTGTCCCACCCAAACTGCACGTGGCACCAGAAGC...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATTCACGGCTGCAGAGTaGCCAGGCATGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAFTAAE*PGMFWE
Trigger: TTCCCAAAACATGCCTGGGCACTCTGCAGCCGTGAA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAAGCATTCTTCACGGCTaGAGAGTGCCCAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGSILHG*RVPRHV
Trigger: AACATGCCTGGGCACTCTGCAGCCGTGAAGAATGCT...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTLERGH*KEISFH
Trigger: GTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACCGGGAGGCGGAGGTTaGACTGAGCTGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSPGGGG*TELRLC
Trigger: GCACAATCTCAGCTCAGTGCAACCTCCGCCTCCCGG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLTRTSS*PQRHLA
Trigger: AGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPTRTSS*PQRHLA
Trigger: AGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGGCATTCCCGCTGCTaGCATTGGTCCCATTGGTAT +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFRHSRC*HWSHWY
Trigger: ATACCAATGGGACCAATGCCAGCAGCGGGAATGCCT...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHLLLHV*SVLWAW
Trigger: CCAGGCCCACAGTACACTCCAGACATGCAGAAGCAG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLSSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGLGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAACTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKLGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGCTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFELGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACATGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACAAGAGCTGGGAAGGTaGTCTCTGGAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKQELGR*SLEEHL
Trigger: AAGATGCTCTTCCAGAGACCACCTTCCCAGCTCTTG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGGGCCTAGGGCTTTGTaGCCAACTTCAGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPGPRAL*PTSEVF
Trigger: AAATACTTCTGAAGTTGGCCACAAAGCCCTAGGCCC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTGGGATACTTCTTACTaGAACCTGGGCCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLWDTSY*NLGLGL
Trigger: AAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCCTGCCTCTGCAGTGGTaGTACCACTTACACATCCAT +
Preference number: 4 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCLPLQW*YHLHIH
Trigger: ATGGATGTGTAAGTGGTACCACCACTGCAGAGGCAG...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTGCCCAGGCATGTTTTaGGAAAAAGTCTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFCPGMF*EKVLRV
Trigger: CACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCA...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLCSHL*KFGERP
Trigger: TGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTGCCTCAGTCAGGAATaGCCAGAGACGGTATCATCG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSCLSQE*PETVSS
Trigger: CGATGATACCGTCTCTGGCCATTCCTGACTGAGGCA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACCACTAGCCTTGTGGTaGGCAAAAGCTCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGPLALW*AKAPKV
Trigger: CACCTTTGGAGCTTTTGCCCACCACAAGGCTAGTGG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAACAACCTCCGCCTCTCTaGTTCAAGCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKQPPPL*FKQFSC
Trigger: GCAGGAGAATTGCTTGAACCAGAGAGGCGGAGGTTG...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATCCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACTCTTGGAAATCACTaGATGAGTCATCAAGGGATC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVTLGNH*MSHQGI
Trigger: GATCCCTTGATGACTCATTCAGTGATTTCCAAGAGT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QGSELCSARILFIGPCHPNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGATATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGYWNGL*KAAPKL
Trigger: CAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATA...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATCCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGAGAGTTTTCTGCCCTaGGTTGCATCATCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKESFLP*VASSLS
Trigger: AGACAGGGATGATGCAACTCAGGGCAGAAAACTCTC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGGGCCTCTGTCAAAATaGGCATTCTTCACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYGPLSK*AFFTAA
Trigger: TGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGGATACTGGGCCACTGTaGCATGACAGGCATCTATAT +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLDTGPL*HDRHLY
Trigger: ATATAGATGCCTGTCATGTCACAGTGGCCCAGTATC...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTCAGCAGCTGTCAGCTaGACACAGCCACTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLSAAVS*TQPLPG
Trigger: ACCCGGAAGTGGCTGTGTTCAGCTGACAGCTGCTGA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618402.4
CDS-3UTR GCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPPGFLG*DAGVGC
Trigger: GCACCCTACTCCAGCATCGCACCCCAAGAAACCAGG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGGGGCACTGTTTCCATaGTGGGAGTTACTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPGALFP*WELLVF
Trigger: AAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLAGVSH*TLQWLL
Trigger: TAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGC...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRAGVSH*TLQWLL
Trigger: TAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGC...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAAGCATCAGGACTCATTaGAGGAACGCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKESIRTH*RNAPLC
Trigger: ACACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCT...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGGGGGCCCCGTCCCTTaGGGTGTTCTTCATATCGAT +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKGGPVP*GVLHID
Trigger: ATCGATATGAAGAACACCGCAAGGGACGGGGCCCCC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCGTCACAGTCTTTGCATaGGGCAGAACAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSVTVFA*GRTGLQ
Trigger: CTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGAC...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGTGTTGGTCCCTATaGAGTCATCTTTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLQCWSL*SHLWKF
Trigger: AAATTTCCAAAGATGACTGCATAGGGACCAACACTG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCATTCAGAGAGACGTGTaGCCTAGATTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLIQRDV*PRLVVL
Trigger: AAGAACTACCAATCTAGGGCACACGTCTCTCTGAAT...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACAAAAGCTCCAAAGGTaGCCATTCAGAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAQKLQR*PFRVSC
Trigger: GCAGCTCACTCTGAATGGGCACCTTTGGAGCTTTTG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGGGTCTTTACCATCATaGCCAGGGCTGGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYGSLPS*PGLVSN
Trigger: GTTAGAGACCAGCCCTGGGCATGATGGTAAAGACCC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGTGTACTGTGGGCCTaGAGGACGCATGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSSVLWA*RTHAQE
Trigger: TTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACT...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: GATCSLGGTILPEVLQTGLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTCTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: FPPKTVVIQTRALKPLYILGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAACCAGGATCTCCAGGTaGAACAGTATTTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSTRISR*NSIFRG
Trigger: TCCTCTGAAAATACTGTTCCACCTGGAGATCCTGGT...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGAAGGC*PLTVGK
Trigger: TTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGC...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACAAGAGCTGGGAAGGTaGTCTCTGGAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGQELGR*SLEEHL
Trigger: AAGATGCTCTTCCAGAGACCACCTTCCCAGCTCTTG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYEARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTGGGATACTTCTTACTaGAACCTGGGCCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFWDTSY*NLGLGL
Trigger: AAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCGAAGGAGTAGAGAACTaGTTCAGTTGTGACAACCAA +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLEGVEN*FSCDNQ
Trigger: TTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTC...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCTAATACACAGGATTTaGGCCTCTGTCAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVLIHRI*ASVKMS
Trigger: GCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCG +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCSEKTP*SQSLHA
Trigger: CGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCG +
Preference number: 4 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWSEKTP*SQSLHA
Trigger: CGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTGGATCCCTATTGGTaGCATCTAATTAAACATTTC +
Preference number: 4 (lower is better)
Translates to: PRPLRCSSYRFREANCAVLDPYW*HLIKHF
Trigger: GAAATGTTTAATTAGATGCCACCAATAGGGATCCAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCATTCTGACATTTGCTaGAATGGTCTACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPHSDIC*NGLQQA
Trigger: AGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTTTATTTCCTCGGCCTaGCAAGGGGAGGGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSFISSA*QGEGFS
Trigger: TGAAAAGCCCTCCCCTTGCCAGGCCGAGGAAATAAA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 72 bp GGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAAGAGATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GSVGPYAVIFGN*ERGHCKEISFH
Trigger: GTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPECAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCCTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILGITVG*LTGVGR
Trigger: TCTGCCTACACCGGTGAGTCAGCCAACTGTGATACC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGATACTGGGCCACTGTaGCATGACAGGCATCTATAT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSDTGPL*HDRHLY
Trigger: ATATAGATGCCTGTCATGTCACAGTGGCCCAGTATC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGATTCAAGCAGTGGGGTaGAGCGGGCTGACACAATGC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKIQAVG*SGLTQC
Trigger: GCATTGTGTCAGCCCGCTTCACCCCACTGCTTGAAT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGTAAGGCATTCCCGCTaGTGGCATTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLVRHSR*WHWSHW
Trigger: CCAATGGGACCAATGCCAGCAGCGGGAATGCCTTAC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAATGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKECSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYCSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAGAGGACTTGTCAGCTaGAATTCCTTTAAACACAGC +
Preference number: 4 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWRGLVS*NSFKHS
Trigger: GCTGTGTTTAAAGGAATTGCAGCTGACAAGTCCTCT...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTAGAGGACTTGTCAGCTaGAATTCCTTTAAACACAGC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCRGLVS*NSFKHS
Trigger: GCTGTGTTTAAAGGAATTGCAGCTGACAAGTCCTCT...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPETIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPERSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPELSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGTCCACCCTTCACTGTaGTGCCCACGTTGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLVHPSL*CPRCWL
Trigger: TAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGAC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEPPCQH*CHQWKG
Trigger: TCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPPPCQH*CHQWKG
Trigger: TCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGLPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAACAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKEQVGKI*PHLPAT
Trigger: AGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTG...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTTTTCTCACAGATACTaGAAAGTCAGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCFSHRY*KVRQCW
Trigger: CCAACACTGCCTGACTTTGCAGTATCTGTGAGAAAA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTTTCTCACAGATACTaGAAAGTCAGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSFSHRY*KVRQCW
Trigger: CCAACACTGCCTGACTTTGCAGTATCTGTGAGAAAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTGCAAAGGTAGATTCTaGTGTCATGGTTCTGTTATG +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFCKGRF*CHGSVM
Trigger: CATAACAGAACCATGACAGCAGAATCTACCTTTGCA...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTACAGCAGGCTACAATaGTCCCTTCTGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSYSRLQ*SLLNGK
Trigger: TTTGCCATTCAGAAGGGAGCATTGTAGCCTGCTGTA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTG +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLSKEAF*AEQDPV
Trigger: CACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCACCAGGATCTCCAGGTaGAACAGTATTTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSTRISR*NSIFRG
Trigger: TCCTCTGAAAATACTGTTCCACCTGGAGATCCTGGT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKCCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTGCTGCCCACGTTGCTaGTTAGAGGAACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKCCPRC*LEEQDW
Trigger: CCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAA +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHPAPHA*LPCTLQ
Trigger: TTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSSFSNC*SFSLHT
Trigger: AGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCTCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFSFSNC*SFSLHT
Trigger: AGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGA...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAGAAGTTGGCACAGCTaGCGTGATACTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKRSWHS*RDTGAL
Trigger: GAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGTTAATGCCCATGACTaGCTGTCCAAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPVNAHD*LSKAEG
Trigger: CCCCTCAGCCTTGGACAGCCAGTCATGGGCATTAAC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAAAACCACTAGAAGCCTaGGCTGCAGCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRKPLEA*AAAPPT
Trigger: AGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTT...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCTACTGGCCATTAAACTaGGATACTTCTTACTGGAAC +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLYWPLN*DTSYWN
Trigger: GTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTA...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTTTCTGCCTCTGCAGTaGTGGTACCACTTACACATC +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSFLPLQ*WYHLHI
Trigger: GATGTGTAAGTGGTACCACCACTGCAGAGGCAGAAA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAATCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKESHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGAAGGAGTAGAGAACTaGTTCAGTTGTGACAACCAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSEGVEN*FSCDNQ
Trigger: TTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPSSLEI*REATAK
Trigger: CTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCCTTTCTTGGAGAACATaGAAAAGCTGTAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSLSWRT*KSCKME
Trigger: CTCCATCTTACAGCTTTTCCATGTTCTCCAAGAAAG...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGTTCCACACCTTTCTTaGAGAACATGGAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCVPHLS*RTWKSC
Trigger: ACAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAAC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTCCGGAGTTCAAGCCTaGCCAACATGGAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYSGVQA*PTWRNL
Trigger: AAGGTTTCTCCATGTTGGCCAGGCTTGAACTCCGGA...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCCTGGGAAGCCCAGATaGCATCAGAATGGGATACAG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLPGKPR*HQNGIQ
Trigger: CTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCACTCTTGGAAATCACTaGATGAGTCATCAAGGGATC +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSTLGNH*MSHQGI
Trigger: GATCCCTTGATGACTCATTCAGTGATTTCCAAGAGT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAATCATCACTTTTTCCTaGAGGAGTGTTATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEIITFS*RSVIFQ
Trigger: CTGAAAGATAACACTCCTTCAGGAAAAAGTGATGAT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACATTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAACCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEPQASS*AFLIPG
Trigger: GCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAGGATCCACTTCCTGCTaGGAGGACAAATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRGSTSC*EDKWRE
Trigger: CTCTCTCCATTTGTCCTCTCAGCAGGAAGTGGATCC...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGGATCCACTTCCTGCTaGGAGGACAAATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKGSTSC*EDKWRE
Trigger: CTCTCTCCATTTGTCCTCTCAGCAGGAAGTGGATCC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGGATCCACTTCCTGCTaGGAGGACAAATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILGSTSC*EDKWRE
Trigger: CTCTCTCCATTTGTCCTCTCAGCAGGAAGTGGATCC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGGGACAATTTTACCTaGAGTCCTGCAGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPWDNFT*SPADWP
Trigger: CGGCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAAGCTTTTTAAAATGTTaGTACTGGGCCACTGTGACA +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTSFLKC*YWATVT
Trigger: TGTCACAGTGGCCCAGTATCAACATTTTAAAAAGCT...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCTAAGGAATTTTATCTaGGGCATTCTGGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: RFREANCAVLAFYLLVPVLRNFI*GILEFL
Trigger: GAGAAATTCCAGAATGCCTCAGATAAAATTCCTTAG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGGAAATCCTTGTTGCTaGATCGGCATCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEGNPCC*IGIRPA
Trigger: AGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAACCTTGCATATTAGGCTaGATGACAGAGACCATAGGA +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKPCILG*MTETIG
Trigger: TCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGG...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGATCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGSNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKSNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFSNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATCAAATCGTTTCTGCTaGTCTTCGGCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQASNRFC*SSANCF
Trigger: GAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPESKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTTIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILRSLKG*SKAGEG
Trigger: TCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAAGCATTCTTCACGGCTaGAGAGTGCCCAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILSILHG*RVPRHV
Trigger: AACATGCCTGGGCACTCTGCAGCCGTGAAGAATGCT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTTGGAGAGAGGCCACTaGAAAGAGATTTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSLERGH*KEISFH
Trigger: GTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCATTCAGAGAGACGTGTaGCCTAGATTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCIQRDV*PRLVVL
Trigger: AAGAACTACCAATCTAGGGCACACGTCTCTCTGAAT...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGCCTCAGGAAAAGCCTaGCAAAAGCTGTCCCACTTG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYASGKA*QKLSHL
Trigger: CAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAACACACATCTTGCCCTaGATTCTGACATTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRTHILP*ILTFAG
Trigger: TCCAGCAAATGTCAGAATGCAGGGCAAGATGTGTGT...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACTTGGGGTGCGATGCTaGAGTAGGGTGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLGVRC*SRVHFC
Trigger: GCAAAAATGCACCCTACTCCAGCATCGCACCCCAAG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCACCAGGATCTCCAGGTaGAACAGTATTTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFTRISR*NSIFRG
Trigger: TCCTCTGAAAATACTGTTCCACCTGGAGATCCTGGT...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: QASGATCSLGGTILPEVLWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEEARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILEARRL*FDTVDP
Trigger: TGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIGAAGN*FKASGL
Trigger: GAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCC...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATGCAGCTCCACCCACTaGTCCAACAAGGTTAATGCC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSCSSTH*SNKVNA
Trigger: GGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATGCAGCTCCACCCACTaGTCCAACAAGGTTAATGCC +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILCSSTH*SNKVNA
Trigger: GGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACAGCTCCATGTGGAAGTaGTGCTGTCCAGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYSSMWK*CCPGWK
Trigger: CTTCCATCCTGGACAGCACCACTTCCACATGGAGCT...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACATTCCAGCTCCATGTaGAAGTGGTGCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSHSSSM*KWCCPG
Trigger: TCCTGGACAGCACCACTTCCACATGGAGCTGGAATG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGTTGTGACAACCAAGTaGGTAAAATCTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYVVTTK*VKSALT
Trigger: GGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAAGGAGTAGAGAACTaGTTCAGTTGTGACAACCAA +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKEGVEN*FSCDNQ
Trigger: TTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTCTGAGAAAACTCCATaGTCACAGTCTTTGCATGCG +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSSEKTP*SQSLHA
Trigger: CGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRSSLEI*REATAK
Trigger: CTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAACCCCACTAGCCTTGTaGTGGGCAAAAGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILTPLAL*WAKAPK
Trigger: CTTTGGAGCTTTTGCCCACCACAAGGCTAGTGGGGT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAACTCTTGGAAATCACTaGATGAGTCATCAAGGGATC +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRTLGNH*MSHQGI
Trigger: GATCCCTTGATGACTCATTCAGTGATTTCCAAGAGT...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCACTCTTGGAAATCACTaGATGAGTCATCAAGGGATC +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSTLGNH*MSHQGI
Trigger: GATCCCTTGATGACTCATTCAGTGATTTCCAAGAGT...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLSIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLCAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGATTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCCTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACTCTTGTGTGATCCTTaGACAGAAAGGTCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRLLCDP*TERSKV
Trigger: AACCTTTGACCTTTCTGTTCAAGGATCACACAAGAG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSYWNGL*KAAPKL
Trigger: CAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTTCCATGCCTTGAGCTaGCTGAATTACTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYFHALS*LNYFCA
Trigger: TGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAA...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGTGTGGCGAGTGACATaGAGCCGATTAGGTTATTCC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKVWRVT*SRLGYS
Trigger: GGAATAACCTAATCGGCTTCATGTCACTCGCCACAC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYLVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPLVRHS*SRSWHS
Trigger: GCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTATCATCGGGAGCGAGTaGGAAAAGCCTTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPIIGSE*EKPFSP
Trigger: AGGAGAGAAAGGCTTTTCTCACTCGCTCCCGATGAT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAAGCTTTTTAAAATGTTaGTACTGGGCCACTGTGACA +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRSFLKC*YWATVT
Trigger: TGTCACAGTGGCCCAGTATCAACATTTTAAAAAGCT...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAAAGCTGAAGTACACTTaGAATAGGCAAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKKLKYT*NRQTED
Trigger: GTCTTCTGTTTGCCTATTTCAAGTGTACTTCAGCTT...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGAAACTGTCTGTTTCTaGGTTGAATGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEETVCF*VECPAP
Trigger: AGGAGCCGGGCATTCAACTCAGAAACAGACAGTTTC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGAAACTGTCTGTTTCTaGGTTGAATGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILETVCF*VECPAP
Trigger: AGGAGCCGGGCATTCAACTCAGAAACAGACAGTTTC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTCSSAN*FCMSGV
Trigger: CACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCA...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLPRQLLSRPELLSHCIFDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...AAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATCTGCAAAGTCATCCTaGTCCCCAACAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILSAKSS*SPTGAR
Trigger: TCTAGCACCTGTTGGGGAGCAGGATGACTTTGCAGA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRLSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCTTTAGGATGTTCTTCTaGAGGCTTCTCTTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: KRADTMHSMEISNLGYSFFRMFF*RLLFFP
Trigger: CGGAAAGAAGAGAAGCCTGCAGAAGAACATCCTAAA...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTGTAAGTGTGCTCACTaGAAAATTGCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLCKCAH*KIATVA
Trigger: AGCTACAGTAGCAATTTTGCAGTGAGCACACTTACA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPQVGKI*PHLPAT
Trigger: AGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKQVGKI*PHLPAT
Trigger: AGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCAAGTGGGTAAAATCTaGCCTCACCTGCCTGCTACT +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTQVGKI*PHLPAT
Trigger: AGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGACAGTGTTGGTCCCTATaGAGTCATCTTTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRQCWSL*SHLWKF
Trigger: AAATTTCCAAAGATGACTGCATAGGGACCAACACTG...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTTTTCTCACAGATACTaGAAAGTCAGGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSFSHRY*KVRQCW
Trigger: CCAACACTGCCTGACTTTGCAGTATCTGTGAGAAAA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACAGGGAAACATTCTTATTaGAAAGGTAGATTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKVLINGHSSSGVKRADTGKHSY*KGRFCC
Trigger: ACAGCAGAATCTACCTTTGCAATAAGAATGTTTCCC...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCTGCATTCTGACATTTaGTGGAATGGTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHLHSDI*WNGLQQ
Trigger: CTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGATGGCATTGGTCCCATTaGTATTCCTGCCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRWHWSH*YSCLHS
Trigger: GCTATGCAGGCAGGAATACCAATGGGACCAATGCCA...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKSSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGTCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFESSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSSSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCTTTCTTATAGGCATCTaGAACCAAACTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: LALHSDICWNGLQQATMLFLIGI*NQTLIV
Trigger: TACAATGAGAGTTTGGTTCCAGATGCCTATAAGAAA...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATTTCTTATAGGCATCTaGAACCAAACTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: SEQASGATCSLGGTILPEFLIGI*NQTLIV
Trigger: TACAATGAGAGTTTGGTTCCAGATGCCTATAAGAAA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAGTCCAAGAGTTTCCCTaGGAAGCCCAGATGACATCA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSVQEFP*EAQMTS
Trigger: TGATGTCATCTGGGCTTCCCAGGGAAACTCTTGGAC...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: LRCSSYRFREANCAVLAFENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FREANCAVLAFYLLVPVTWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACACTGCTGCCACCAATaGAAGGGAGATCTAAGGACT +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSHCCHQ*KGDLRT
Trigger: AGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACAAAACTGGCAAGAGCTaGGAAGGTGGTCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYKTGKS*EGGLWK
Trigger: CTTCCAGAGACCACCTTCCCAGCTCTTGCCAGTTTT...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAA +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKPAPHA*LPCTLQ
Trigger: TTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTACTGGCCATTAAACTaGGATACTTCTTACTGGAAC +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLYWPLN*DTSYWN
Trigger: GTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATCGCATTCTATTTATTaGTCCCTGTCACCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLSHSIY*SLSPRG
Trigger: CCCACGGGGTGACAGGGACCAATAAATAGAATGCGA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTGCCACGTGCAGTTTaGGTGGGACAATTTTACCTG +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVPRAV*VGQFYL
Trigger: CAGGTAAAATTGTCCCACCCAAACTGCACGTGGCAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: LIHRIWASVKMSILHGCRRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCAGAAGGAGTAGAGAACTaGTTCAGTTGTGACAACCAA +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAEGVEN*FSCDNQ
Trigger: TTGGTTGTCACAACTGAACCAGTTCTCTACTCCTTC...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAATGCCCAGGCATGTTTTaGGAAAAAGTCTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKECPGMF*EKVLRV
Trigger: CACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCA...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAACTAATACACAGGATTTaGGCCTCTGTCAAAATGAGC +
Preference number: 4 (lower is better)
Translates to: RADTMHSMEISNLGYSFQLIHRI*ASVKMS
Trigger: GCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQASSLEI*REATAK
Trigger: CTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGLCSHL*KFGERP
Trigger: TGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGGAAAAGCTGTAAGATaGAGCAAGACAGAATTTGTC +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKGKAVR*SKTEFV
Trigger: GACAAATTCTGTCTTGCTCCATCTTACAGCTTTTCC...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGTCCTTGGATCCCTATTaGTGGCATCTAATTAAACAT +
Preference number: 4 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWSLDPY*WHLIKH
Trigger: ATGTTTAATTAGATGCCACCAATAGGGATCCAAGGA...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
3UTR CAA 72 bp ATTTCCTCGGCCTGGCAAGGGGAGGGCTTTTCAGTATaGTTATTTGGTACACACTTACCTGAAGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: ISSAWQGEGFSV*LFGTHLPEEIS
Trigger: ACTTATTTCTTCAGGTAAGTGTGTACCAAATAACAATACTGAAAAGCCCTCCCCTTGCCAGGCCGAGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKDLEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCAAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQASIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACTGTTGTATAGTTCCTaGGGGGAAGGATGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLLYSS*GEGWWK
Trigger: TTTCCACCATCCTTCCCCTCAGGAACTATACAACAG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRCAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCATCATCACTTTTTCCTaGAGGAGTGTTATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSIITFS*RSVIFQ
Trigger: CTGAAAGATAACACTCCTTCAGGAAAAAGTGATGAT...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACTCCATAGGCCAGCTTaGAACTGTCTGTTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLHRPA*NCLFLS
Trigger: ACTCAGAAACAGACAGTTTCAAGCTGGCCTATGGAG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTAAGCTGAAGTACACTTaGAATAGGCAAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSKLKYT*NRQTED
Trigger: GTCTTCTGTTTGCCTATTTCAAGTGTACTTCAGCTT...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAATAGGAAATCCTTGTTaGTGCATCGGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRIGNPC*CIGIRP
Trigger: AGGCCTGATGCCGATGCAGCAACAAGGATTTCCTAT...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAAATTCCCATAATGCCTTaGATATTAGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: RADTMHSMEISNLGYSFQIPIMP*ILGCMT
Trigger: TGTCATGCAGCCTAATATGCAAGGCATTATGGGAAT...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFEKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSTIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGTIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGTGTCTGAAAGCCACTaGTTTCTCTCCCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPVSESH*FLSQGF
Trigger: AAATCCCTGGGAGAGAAAGCAGTGGCTTTCAGACAC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACTCCCCAGGCATCTCTaGCATTCATATGCATATCTC +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQELPRHL*HSYAYL
Trigger: GAGATATGCATATGAATGGCAGAGATGCCTGGGGAG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYFLTAH*SGFYPQ
Trigger: CTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAA...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTATGTCCTTCAGCAACTaGTGGAGTTTCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTMSFSN*WSFSLH
Trigger: GTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACAT...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATGTAAGTGTGCTCACTaGAAAATTGCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQACKCAH*KIATVA
Trigger: AGCTACAGTAGCAATTTTGCAGTGAGCACACTTACA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATAAGCGAACTGTGCAGTaGTCGCATTCTATTTATTGG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHKRTVQ*SHSIYW
Trigger: CCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCAGTGTTGGTCCCTATaGAGTCATCTTTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSQCWSL*SHLWKF
Trigger: AAATTTCCAAAGATGACTGCATAGGGACCAACACTG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATACAGCAGGCTACAATaGTCCCTTCTGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGYSRLQ*SLLNGK
Trigger: TTTGCCATTCAGAAGGGAGCATTGTAGCCTGCTGTA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTTTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FFLPRQLLSRPELLSHCISSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...TATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTTTCTTATAGGCATCTaGAACCAAACTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCFLIGI*NQTLIV
Trigger: TACAATGAGAGTTTGGTTCCAGATGCCTATAAGAAA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTTTCTTATAGGCATCTaGAACCAAACTCTCATTGTA +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPFLIGI*NQTLIV
Trigger: TACAATGAGAGTTTGGTTCCAGATGCCTATAAGAAA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: NTAAASSSLDQESRGPYFEWDTV*QYLFQL
Trigger: CAACTGGAATAGATACTGCCAAACTGTATCCCATTC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSEWDTV*QYLFQL
Trigger: CAACTGGAATAGATACTGCCAAACTGTATCCCATTC...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAAGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RADTMHSMEISNLGYSFQEWDTV*QYLFQL
Trigger: CAACTGGAATAGATACTGCCAAACTGTATCCCATTC...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: AAASSSLDQESRGPYFRKEWDTV*QYLFQL
Trigger: CAACTGGAATAGATACTGCCAAACTGTATCCCATTC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: SIQGSELCSARILFIGPCENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: ISEQASGATCSLGGTILPWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATTTGAAGAATTGAGGTaGCTGAGGGGGATCCACTTC +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLFEELR*LRGIHF
Trigger: GAAGTGGATCCCCCTCAGCCACCTCAATTCTTCAAA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATGGGAAGGTGGTCTCTaGAAGAGCATCTTCACTTAC +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILWEGGL*KSIFTY
Trigger: GTAAGTGAAGATGCTCTTCCAGAGACCACCTTCCCA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACT +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKSFSNC*SFSLHT
Trigger: AGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGA...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACAGCAACCCCGTTACTaGCCATTAAACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSQQPRY*PLNWDT
Trigger: AGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAACAGCAACCCCGTTACTaGCCATTAAACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKQQPRY*PLNWDT
Trigger: AGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTG...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATTTCTGCCTCTGCAGTaGTGGTACCACTTACACATC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSFLPLQ*WYHLHI
Trigger: GATGTGTAAGTGGTACCACCACTGCAGAGGCAGAAA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGATAAAAACAAGCACTaGCTCCAAGCAGTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILDKNKH*LQAVAH
Trigger: ATGGGCGACTGCTTGGAGCCAGTGCTTGTTTTTATC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACTGGTCTCTAACTCCTaGGAAACATTCTTATTGCAA +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALVSNS*ETFLLQ
Trigger: TTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAACTGGTCTCTAACTCCTaGGAAACATTCTTATTGCAA +
Preference number: 4 (lower is better)
Translates to: RADTMHSMEISNLGYSFQLVSNS*ETFLLQ
Trigger: TTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAG...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKESIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGAATCATCACTTTTTCCTaGAGGAGTGTTATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRIITFS*RSVIFQ
Trigger: CTGAAAGATAACACTCCTTCAGGAAAAAGTGATGAT...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCAAACTCCTCTTGTGTaGTCCTTGAACAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLQTPLV*SLNRKV
Trigger: GACCTTTCTGTTCAAGGATCACACAAGAGGAGTTTG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGGGAAGAGTTCTACATTaGCTTTTCACACACACATAT +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFEGRVLH*LFTHTY
Trigger: ATATGTGTGTGTGAAAAGTCAATGTAGAACTCTTCC...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR TCA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGAAGCCACTGTATATTTaGGAACATCCAAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPRQLLSRPELLSHCIFEKPLYI*EHPNLY
Trigger: GTACAGATTTGGATGTTCTCAAATATACAGTGGCTT...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTATTGGTATTCCTGCCTaGATAGCAATAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPIGIPA*IAIGPW
Trigger: CCAAGGACCTATTGCTATGCAGGCAGGAATACCAAT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCTCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FGNLERGHCKEISFHCLSSKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSSKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTTTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATAAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: FFLPRQLLSRPELLSHCIKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...TATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGATGCTGGAGTAGGGTaGATTTTTGCATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTDAGVG*IFASLE
Trigger: TTCCAGAGATGCAAAAATGCACCCTACTCCAGCATC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYTIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGAAAGCCATAAAATCTaGAAAGTCATCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPESHKI*KVILLP
Trigger: GGGGAGCAGGATGACTTTGCAGATTTTATGGCTTTC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHLSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCTGCATTCTGACATTTaGTGGAATGGTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLLHSDI*WNGLQQ
Trigger: CTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATCAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTAGTTCCAGGAAGTaGCATCAACAAAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPFSSRK*HQQRRG
Trigger: GCCCCTTCTTTGTTGATGCCACTTCCTGGAACTAAA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACACCAGGATCTCCAGGTaGAACAGTATTTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYTRISR*NSIFRG
Trigger: TCCTCTGAAAATACTGTTCCACCTGGAGATCCTGGT...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAATGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAAAGTCAGGCAGTGTTaGTCCCTATGCAGTCATCTT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLKVRQC*SLCSHL
Trigger: AAGATGACTGCATAGGGACCAACACTGCCTGACTTT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAGGAAAAGCTGTAAGATaGAGCAAGACAGAATTTGTC +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKEGKAVR*SKTEFV
Trigger: GACAAATTCTGTCTTGCTCCATCTTACAGCTTTTCC...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATATGCTCCCTTCTGAATaGCAAATGTCTGAAAATGTC +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHMLPSE*QMSENV
Trigger: GACATTTTCAGACATTTGCCATTCAGAAGGGAGCAT...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTCATCAAGGGATCCTaGCTTAGAAGCATCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVIKGS*LRSILK
Trigger: TTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAACTCTTGGAAATCACTaGATGAGTCATCAAGGGATC +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKTLGNH*MSHQGI
Trigger: GATCCCTTGATGACTCATTCAGTGATTTCCAAGAGT...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGGAGTTACTTGTTTTTaGAGAAGCAGGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYGVTCF*RSRQLL
Trigger: CAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLLGFSL*NSPKSS
Trigger: GGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTGGAAGAGTTCTACATTaGCTTTTCACACACACATAT +
Preference number: 4 (lower is better)
Translates to: FPPKTVVIQTRALKPLYIGRVLH*LFTHTY
Trigger: ATATGTGTGTGTGAAAAGTCAATGTAGAACTCTTCC...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR TCA 90 bp TTTTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATAAAGCCACTGTATATTTaGGAACATCCAAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: FFLPRQLLSRPELLSHCIKPLYI*EHPNLY
Trigger: GTACAGATTTGGATGTTCTCAAATATACAGTGGCTT...TATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR GCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAGAGGACTTGTCAGCTaGAATTCCTTTAAACACAGC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKRGLVS*NSFKHS
Trigger: GCTGTGTTTAAAGGAATTGCAGCTGACAAGTCCTCT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAAGAGGACTTGTCAGCTaGAATTCCTTTAAACACAGC +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKRGLVS*NSFKHS
Trigger: GCTGTGTTTAAAGGAATTGCAGCTGACAAGTCCTCT...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LCSHLWKFGERPLQRDFILSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACTATCAGACATGACATaGTTAAGATCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILLSDMT*LRSPPT
Trigger: TGTGGGAGGAGATCTTAAGCATGTCATGTCTGATAG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTAGGATGTTCTTCTaGAGGCTTCTCTTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPFRMFF*RLLFFP
Trigger: CGGAAAGAAGAGAAGCCTGCAGAAGAACATCCTAAA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPRQLLSRPELLSHCIFFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...AAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPPKTVVIQTRALKPLYIFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAATCTTCTCTCCTGTCTTaGGTTTCACACTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQESSLLS*VSHCSK
Trigger: TTTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGA...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLEAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGAAGCAGGCAACTCTTaGAAATCACTGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKEAGNS*KSLNES
Trigger: TGACTCATTCAGTGATTTCCAAGAGTTGCCTGCTTC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATGGAAGAAAATTTACTaGAGTGGAAGTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAWKKIY*SGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAATTCCTTTTGCTCACTaGTCTGAGGAATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSIPFAH*SEESCL
Trigger: AAGACACGATTCCTCAGACCAGTGAGCAAAAGGAAT...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKICRVG*YETTRS
Trigger: GCTTCTAGTGGTTTCATACCAACCTACCCTGCAAAT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGATCATCTTTGGAAATTTaGAGAGAGGCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRSSLEI*REATAK
Trigger: CTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGA...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPLCSHL*KFGERP
Trigger: TGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAACTATGCAGTCATCTTTaGAAATTTGGAGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKLCSHL*KFGERP
Trigger: TGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAATTATCTGAGGCATTCTaGAATTTCTCAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: RADTMHSMEISNLGYSFQLSEAF*NFSGIE
Trigger: TTCTATTCCTGAGAAATTCCAGAATGCCTCAGATAA...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATTGGATCCCTATTGGTaGCATCTAATTAAACATTTC +
Preference number: 4 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRLDPYW*HLIKHF
Trigger: GAAATGTTTAATTAGATGCCACCAATAGGGATCCAA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLDLEAS*KSWKSS
Trigger: AGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKSIFVH*RQCFSS
Trigger: GGAACTAAAGCATTGCCTTCAATGGACAAATATGCT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKCAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTGTGCTAAACACAGCTaGAAAAGACAATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTCAKHS*KRQWFL
Trigger: GAGAAACCATTGTCTTTTTCAGCTGTGTTTAGCACA...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLRLLLR*NRAITE
Trigger: TTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTTTTGCTCACTGGTCTaGGGAATCGTGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKFCSLV*GIVSLK
Trigger: TTTTAAAGACACGATTCCTCAGACCAGTGAGCAAAA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTTTCCAAATCTTGTCTaGGAAAACTCCATGGTCACA +
Preference number: 4 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKFPNLV*ENSMVT
Trigger: TGTGACCATGGAGTTTTCTCAGACAAGATTTGGAAA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAATTCCCATAATGCCTTaGATATTAGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILIPIMP*ILGCMT
Trigger: TGTCATGCAGCCTAATATGCAAGGCATTATGGGAAT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTATTCCCATAATGCCTTaGATATTAGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLIPIMP*ILGCMT
Trigger: TGTCATGCAGCCTAATATGCAAGGCATTATGGGAAT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAATTCCCATAATGCCTTaGATATTAGGCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRIPIMP*ILGCMT
Trigger: TGTCATGCAGCCTAATATGCAAGGCATTATGGGAAT...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCTTCTAAGAGTTTTTaGTGCTGTTCAAATCGTTTC +
Preference number: 4 (lower is better)
Translates to: PMQSSLEIWREATAKRFHSSKSF*CCSNRF
Trigger: GAAACGATTTGAACAGCAGCAAAAACTCTTAGAAGA...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAAAAGTCTGAGCTTTTaGTTCTGCTCTTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKKSLSF*FCSSNW
Trigger: CCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTACCATCATCAGTTCCTaGAGATCTGAATTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLTIISS*RSEFCK
Trigger: TTTGCAGAATTCAGATCTGCAGGAACTGATGATGGT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTAGAAGTTTTTGTTGCTaGCAATGCTGTCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPRSFCC*QCCHSS
Trigger: GCTACTATGACAGCATTGGCAGCAACAAAAACTTCT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILLSSGF*SDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQERKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAAGAAAGGTCAAAGGTTaGCAGCTCACTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKRKVKG*QLTFDH
Trigger: ATGATCAAAAGTGAGCTGGCAACCTTTGACCTTTCT...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCTTTACTACCTGATTTaGAGGGTAGGTTGGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLLYYLI*RVGWYE
Trigger: TTCATACCAACCTACCCTGCAAATCAGGTAGTAAAG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATGTAAGTGTGCTCACTaGAAAATTGCTACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLCKCAH*KIATVA
Trigger: AGCTACAGTAGCAATTTTGCAGTGAGCACACTTACA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGATCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: HGKYPHISSTSSISSMSRSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATCACAGTTTCAATACTaGAGCAGCAAGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILSQFQY*SSKFFL
Trigger: AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTGCAAAGGTAGATTCTaGTGTCATGGTTCTGTTATG +
Preference number: 4 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKCKGRF*CHGSVM
Trigger: CATAACAGAACCATGACAGCAGAATCTACCTTTGCA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACAGCCCTATAATCTTTaGAAAGCTGAAGTACACTTG +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILQPYNL*KAEVHL
Trigger: CAAGTGTACTTCAGCTTTGCAAAGATTATAGGGCTG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACAGCCCTATAATCTTTaGAAAGCTGAAGTACACTTG +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSQPYNL*KAEVHL
Trigger: CAAGTGTACTTCAGCTTTGCAAAGATTATAGGGCTG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTCTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: FLPRQLLSRPELLSHCIFLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...AAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TTTTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATACTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: FFLPRQLLSRPELLSHCILNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...TATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPEWDTV*QYLFQL
Trigger: CAACTGGAATAGATACTGCCAAACTGTATCCCATTC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACAGATGACATCAGAATaGGATACAGTTTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILQMTSE*DTVWQY
Trigger: ATACTGCCAAACTGTATCCCATTCTGATGTCATCTG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTGTTACCGCTATCATaGCTAGAACGGTATAAAGTT +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVLPLS*LERYKV
Trigger: AACTTTATACCGTTCTAGCCATGATAGCGGTAACAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAGAAAATTTACTGGAGTaGAAGTCAGCAAAATCATCA +
Preference number: 4 (lower is better)
Translates to: GVTKPTILGKENGDYTKEENLLE*KSAKSS
Trigger: TGATGATTTTGCTGACTTCCACTCCAGTAAATTTTC...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTAGATCAAGAAAGCCGTaGTCCGTATTTCAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTRSRKP*SVFQKI
Trigger: GATTTTCTGAAATACGGACCACGGCTTTCTTGATCT...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CCA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACTTTCTTGGAGAACATaGAAAAGCTGTAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLLSWRT*KSCKME
Trigger: CTCCATCTTACAGCTTTTCCATGTTCTCCAAGAAAG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR TCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACATCATCACTTTTTCCTaGAGGAGTGTTATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYIITFS*RSVIFQ
Trigger: CTGAAAGATAACACTCCTTCAGGAAAAAGTGATGAT...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGATCATCACTTTTTCCTaGAGGAGTGTTATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKIITFS*RSVIFQ
Trigger: CTGAAAGATAACACTCCTTCAGGAAAAAGTGATGAT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSNFMSN*TESASS
Trigger: TGAAGATGCACTCTCTGTTCAGTTTGACATGAAATT...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR TCA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCTAAGGAATTTTATCTaGGGCATTCTGGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYLRNFI*GILEFL
Trigger: GAGAAATTCCAGAATGCCTCAGATAAAATTCCTTAG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR GCA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTSKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR GCA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAATCTAAGAGTTTTTGCTaGTGTTCAAATCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SVLHSFNTAAASSSLDQESKSFC*CSNRFC
Trigger: GCAGAAACGATTTGAACAGCAGCAAAAACTCTTAGA...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR GCA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGGGAAACATTCTTATTaGAAAGGTAGATTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKGKHSY*KGRFCC
Trigger: ACAGCAGAATCTACCTTTGCAATAAGAATGTTTCCC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CCA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTCTGCTCTTCAAACTaGCGTCTTTTTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLFCSSN*RLFLSS
Trigger: AGAAGAAAGAAAAAGACGCCAGTTTGAAGAGCAGAA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACTAAATTTCCTTTTATaGCTTCCAAAGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLNFLL*LPKHHL
Trigger: GAGATGATGCTTTGGAAGCCATAAAAGGAAATTTAG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CCA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATTATCTGAGGCATTCTaGAATTTCTCAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILLSEAF*NFSGIE
Trigger: TTCTATTCCTGAGAAATTCCAGAATGCCTCAGATAA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS GCA 90 bp GAACCAGCTCCTGGCCGCAGCGCCATCTTGCTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTTATCAGCAGCTGTCAGCTGAACACA +
Preference number: 5 (lower is better)
Translates to: EPAPGRSAILLPTCR*LRRRHLISSCQLNT
Trigger: TGTGTTCAGCTGACAGCTGCTGATAAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCCAGGAGCTGGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000618402.4
ENST00000619976.1
ENST00000633880.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGGCCGCAGCGCCATCTaGCTCCCGACCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVGRSAI*LPTCRC
Trigger: GCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: TGAPSLAVFFISIQGSELCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTRHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGGCCGCAGCGCCATCTaGCTCCCGACCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTGRSAI*LPTCRC
Trigger: GCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS TCA 90 bp GCAGGTCAGGCAGGACGAGGCCAGGAGGCTTTGGTTCGACACAGTTaGTCCAGAAGTTGGCACAGCTGGCGTGATACTGGTGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: AGQAGRGQEALVRHS*SRSWHSWRDTGALH
Trigger: ATGGAGGGCACCAGTATCACGCCAGCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTCGTCCTGCCTGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS TCA 90 bp CATGACTGGCTGTCCAAGGCTGAGGGGCATGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTGACTCACCGGTGTAGGCAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: HDWLSKAEGHGARRT*RYHSWLTHRCRQSH
Trigger: ATGACTCTGCCTACACCGGTGAGTCAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCCATGCCCCTCAGCCTTGGACAGCCAGTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 90 bp ACTGCTTCTGCATGTCTGGAGTGTACTGTGGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTCCTAGGTAAGGCATTCCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TASACLECTVGLEDA*PGRVLVLGKAFPLL
Trigger: CAGCAGCGGGAATGCCTTACCTAGGACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000620424.1
ENST00000621136.4
ENST00000622045.4
ENST00000632310.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
CDS CCA 90 bp AGGGAGAGGCTGTGTCCCAGCCTTCTGTGTATGCAACTGGCCAAGTaGGGTGGAGGGGTGGAAAGACTGAAAGGGCTGGGACGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RERLCPSLLCMQLAK*GGGVERLKGLGRGR
Trigger: TCTTCCACGTCCCAGCCCTTTCAGTCTTTCCACCCCTCCACCCCACTTGGCCAGTTGCATACACAGAAGGCTGGGACACAGCCTCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGGCCGCAGCGCCATCTaGCTCCCGACCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPGRSAI*LPTCRC
Trigger: GCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: GATCSLGGTILPEVLQTGRHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGRHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCGGCCGCAGCGCCATCTaGCTCCCGACCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: FGNLERGHCKEISFHCLSGRSAI*LPTCRC
Trigger: GCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCC...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGGCCGCAGCGCCATCTaGCTCCCGACCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFGRSAI*LPTCRC
Trigger: GCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS TCA 90 bp GGAATTTGCCCAGGGACGCCATGTAAGGCAAAAGGCACTGGACTCTaGCTTGGAGGGAGAGGCTGTGTCCCAGCCTTCTGTGTATGCAAC +
Preference number: 5 (lower is better)
Translates to: GICPGTPCKAKGTGL*LGGRGCVPAFCVCN
Trigger: GTTGCATACACAGAAGGCTGGGACACAGCCTCTCCCTCCAAGTCAGAGTCCAGTGCCTTTTGCCTTACATGGCGTCCCTGGGCAAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS TCA 90 bp CCCCAGCTCCACACGCTTGGTTACCCTGTACACTTCAACAACACCTaGCGGGATGAGAGAGCAGAGAGAGAGTGTTGGCAGTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: PQLHTLGYPVHFNNT*RDERAERECWQWRH
Trigger: GTGTCTCCACTGCCAACACTCTCTCTCTGCTCTCTCATCCCGTCAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CCA 90 bp TTCAAATCGTTTCTGCTGCTCTTCGGCAAACTGCTTCTGCATGTCTaGAGTGTACTGTGGGCCTGGAGGACGCATGCCCAGGAAGGGTGC +
Preference number: 5 (lower is better)
Translates to: FKSFLLLFGKLLLHV*SVLWAWRTHAQEGC
Trigger: GCACCCTTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000620424.1
ENST00000621136.4
ENST00000622045.4
ENST00000632310.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGTTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGACTGTGCTGCCCACGTaGCTGGTTAGAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQTVLPT*LVRGTG
Trigger: TCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAGT...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAACGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPERGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCTGTCTGTTTCTGAGTaGAATGCCCGGCTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLSVSE*NARLLE
Trigger: CTCGAGGAGCCGGGCATTCAACTCAGAAACAGACAG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS TCA 90 bp CATTTTCCTCCACCTCTCCCGTCAGGTCTTTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCTCATTCAGAGTATTGGAACGGTCTC +
Preference number: 5 (lower is better)
Translates to: HFPPPLPSGLCTCLG*RAGRASHSEYWNGL
Trigger: GAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACAAAGACCTGACGGGAGAGGTGGAGGAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPRHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVHRKSL*LHRHQA
Trigger: GGCCTGATGCCGATGCAGCAACAAGGATTTCCTATG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCCACACCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPPTPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGTGTGGG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQLKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCTTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: TGAPSLAVFFISIQGSELVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAATGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCCATGGTCACAGTCTTaGCATGCGGCAGAACAGGTT +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVPWSQS*HAAEQV
Trigger: AACCTGTTCTGCCGCATGCAAAGACTGTGACCATGG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCGTGTCCCACACTCCTaGGATCCCTATTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPRVPHS*DPYWWH
Trigger: ATGCCACCAATAGGGATCCAAGGAGTGTGGGACACG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS TCA 90 bp CTGAGGGGCATGGAGCCCGCAGGACCTGAAGGTATCACAGTTGGCTaGCTCACCGGTGTAGGCAGAGTCATAGAAAAGCCACTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: LRGMEPAGPEGITVG*LTGVGRVIEKPLKV
Trigger: AACTTTAAGTGGCTTTTCTATGACTCTGCCTACACCGGTGAGTCAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCCATGCCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 90 bp CTGATTTGCAGGGTAGGTTGGTATGAAACCACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCCAACAAGGTTAATGCCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: LICRVGWYETTRSLG*SSTHWSNKVNAHDW
Trigger: CCAGTCATGGGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTTCATACCAACCTACCCTGCAAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPHRKSL*LHRHQA
Trigger: GGCCTGATGCCGATGCAGCAACAAGGATTTCCTATG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPRSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTCCCTTCCAGAGAAAGTaGTCTGAAGACATCGTACTT +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTPFQRK*SEDIVL
Trigger: AAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGG...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GATGACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGATTCTCTCCCAGGGATTaGTCCGAGTTTATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: DDGGPVPCGVLHIDSGKRFSPRD*SEFMEE
Trigger: TTCTTCCATAAACTCGGACAAATCCCTGGGAGAGAA...TCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCTTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCGAAGGGCCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: RFREANCAVLAFYLLVPVEGPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGCCCTTC...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS CCA 90 bp CCCACACACATCCATCTACAGCAACCCCGTTACTGGCCATTAAACTaGGATACTTCTTACTGGAACCTGGGCCTAGGGCTTTGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: PTHIHLQQPRYWPLN*DTSYWNLGLGLCGQ
Trigger: TTGGCCACAAAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTGTAGATGGATGTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619976.1
ENST00000633880.1
CDS-3UTR CAA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAACGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: RADTMHSMEISNLGYSFQRHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCCCACACCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPPTPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGTGTGGG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCACTGTGCTGCCCACGTaGCTGGTTAGAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFTVLPT*LVRGTG
Trigger: TCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAGT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCCGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: LALHSDICWNGLQQATMLRSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: RFREANCAVLAFYLLVPVSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCTGAGAAAACTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: SEKTPWSQSLHAAEQVCSSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...GCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAGTTTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCTCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCCTGGGCCTAGGGCTTaGTGGCCAACTTCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: RFREANCAVLAFYLLVPVPGPRA*WPTSEV
Trigger: TACTTCTGAAGTTGGCCACAAAGCCCTAGGCCCAGG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGCAAAGTCAGGCAGTGTaGGTCCCTATGCAGTCATCT +
Preference number: 5 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRQSQAV*VPMQSS
Trigger: AGATGACTGCATAGGGACCAACACTGCCTGACTTTG...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCCTGTCTGTTTCTGAGTaGAATGCCCGGCTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: RFREANCAVLAFYLLVPVLSVSE*NARLLE
Trigger: CTCGAGGAGCCGGGCATTCAACTCAGAAACAGACAG...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAACGGCATCAGGCCTGCTaGAGGGGGTCTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: GVTKPTILGKENGDYTKERHQAC*RGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAACATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEHRKSL*LHRHQA
Trigger: GGCCTGATGCCGATGCAGCAACAAGGATTTCCTATG...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: TGAPSLAVFFISIQGSELRMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTRMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GATCSLGGTILPEVLQTGHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGACTGTGCTGCCCACGTaGCTGGTTAGAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWTVLPT*LVRGTG
Trigger: TCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAGT...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQTKVVT*ERDVMV
Trigger: CACCATGACATCTCTCTCCAAAGTAACGACCTTTGT...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: TGAPSLAVFFISIQGSELVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...CAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GACGGGGGCCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: DGGPVPCGVLHIDSGKRTSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...AGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGGCCCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTTTGGTTCGACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPFGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGCCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCTGTTCCACACCTTTCTaGGAGAACATGGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GATCSLGGTILPEVLQTGCSTPF*ENMEKL
Trigger: CAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAACA...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCTGTCTGTTTCTGAGTaGAATGCCCGGCTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: SIQGSELCSARILFIGPCLSVSE*NARLLE
Trigger: CTCGAGGAGCCGGGCATTCAACTCAGAAACAGACAG...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616179.4
ENST00000618176.4
ENST00000621136.4
ENST00000632841.1
CDS TCA 90 bp CTCCTCGAGTCCACATTCAAGAGGCACACTCCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGCCGTAACATACAGGAGGAAAAATCC +
Preference number: 5 (lower is better)
Translates to: LLESTFKRHTPQASS*AFLIPGRNIQEEKS
Trigger: GGATTTTTCCTCCTGTATGTTACGGCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGGAGTGTGCCTCTTGAATGTGGACTCGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS GCA 90 bp ACTGAACAGAGAGTGCATCTTCAGAGTCCTCCTTGCCAACACTGCTaGCACCAATGGAAGGGAGATCTAAGGACTTCACTGATGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TEQRVHLQSPPCQHC*HQWKGDLRTSLMQS
Trigger: ACTCTGCATCAGTGAAGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTCTCTGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 90 bp TTTATCGATGTCCTTCAGCAACTGCTGGAGTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAGCTCCACACGCTTGGTTACCCTGTA +
Preference number: 5 (lower is better)
Translates to: FIDVLQQLLEFLTAH*SGFYPQLHTLGYPV
Trigger: TACAGGGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS GCA 90 bp TGGGACGTGGAAGAAGGCCCACATGGGGGAACTTCAACAGGCCCCTaGATAAAGTCACTGAATTCTTCTTCATCAAGAAAGGCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: WDVEEGPHGGTSTGP*IKSLNSSSSRKAGD
Trigger: ATCACCTGCCTTTCTTGATGAAGAAGAATTCAGTGACTTTATGCAGGGGCCTGTTGAAGTTCCCCCATGTGGGCCTTCTTCCACGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTGAGGGAAATACTCCCACACCTGGTT +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*AEQDPVREILPHLV
Trigger: AACCAGGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000610513.2
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTGAGGGAAATACTCCCACACACATCC +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*AEQDPVREILPHTS
Trigger: GGATGTGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619976.1
ENST00000633880.1
CDS CCA 90 bp CATGGTCAGTTTGGAGTCATGCTGGCAAGGCTGGAGTGTAAGTCATaGGGAATAGCAAGAGTTGAGAGTGGGCAGGAGTTAAGATCACAC +
Preference number: 5 (lower is better)
Translates to: HGQFGVMLARLECKS*GIARVESGQELRSH
Trigger: GTGTGATCTTAACTCCTGCCCACTCTCAACTCTTGCTATTCCCCATGACTTACACTCCAGCCTTGCCAGCATGACTCCAAACTGACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPHRKSL*LHRHQA
Trigger: GGCCTGATGCCGATGCAGCAACAAGGATTTCCTATG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKRSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCCCCTTCCAGAGAAAGTaGTCTGAAGACATCGTACTT +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPPFQRK*SEDIVL
Trigger: AAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGG...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGTTCTCTCCCAGGGATTaGTCCGAGTTTATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRFSPRD*SEFMEE
Trigger: TTCTTCCATAAACTCGGACAAATCCCTGGGAGAGAA...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAACCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAGAAGGGCCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: AAASSSLDQESRGPYFRKEGPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGCCCTTC...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 5 (lower is better)
Translates to: LCSHLWKFGERPLQRDFIRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTGCGGCAGAACAGGTTaGCAGCGAAGGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKCGRTG*QRRLPG
Trigger: CCCCGGGAGCCTTCGCTGCAAACCTGTTCTGCCGCA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTCACAGATACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGCCATGGTCACAGTCTTaGCATGCGGCAGAACAGGTT +
Preference number: 5 (lower is better)
Translates to: SHRYCKVRQCWSLCSHLWPWSQS*HAAEQV
Trigger: AACCTGTTCTGCCGCATGCAAAGACTGTGACCATGG...CCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTATCTGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPVIFGN*ERGHCK
Trigger: TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGAC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAAAGTCAGGCAGTGTaGGTCCCTATGCAGTCATCT +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTQSQAV*VPMQSS
Trigger: AGATGACTGCATAGGGACCAACACTGCCTGACTTTG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS GCA 90 bp ATCTCCTCCCACATCAGCCAATTTCATGTCAAACTGAACAGAGAGTaGATCTTCAGAGTCCTCCTTGCCAACACTGCTGCCACCAATGGA +
Preference number: 5 (lower is better)
Translates to: ISSHISQFHVKLNRE*IFRVLLANTAATNG
Trigger: TCCATTGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTCTCTGTTCAGTTTGACATGAAATTGGCTGATGTGGGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 90 bp TCCATACTTTATCGATGTCCTTCAGCAACTGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTATCCCCAGCTCCACACGCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: SILYRCPSATAGVSH*TLQWLLSPAPHAWL
Trigger: TAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAAGTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS GCA 90 bp TACCTCCACATTCTAAGGACAGCCACCAGACACATCCCTAACCCCTaGAATGTAACAGTCACCAAAGACATGACCCCGATCTCTCTAAGT +
Preference number: 5 (lower is better)
Translates to: YLHILRTATRHIPNP*NVTVTKDMTPISLS
Trigger: ACTTAGAGAGATCGGGGTCATGTCTTTGGTGACTGTTACATTGCAGGGGTTAGGGATGTGTCTGGTGGCTGTCCTTAGAATGTGGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CCA 90 bp AGGCATCTGGAACCAAACTCTCATTGTAAATCCAAGGAGGCATTCTaGGCTGAGCAGGATCCTGTGAGGGAAATACTCCCACACCTAGAA +
Preference number: 5 (lower is better)
Translates to: RHLEPNSHCKSKEAF*AEQDPVREILPHLE
Trigger: TTCTAGGTGTGGGAGTATTTCCCTCACAGGATCCTGCTCAGCCCAGAATGCCTCCTTGGATTTACAATGAGAGTTTGGTTCCAGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCATTCCCATAATGCCTaGCATATTAGGCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPHSHNA*HIRLHD
Trigger: GTCATGCAGCCTAATATGCAAGGCATTATGGGAATG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGCCGAGGCCTCAGGAAAAGCCTGCCAAAAGCTGTCCCACTTGTGTTGTTAGAACAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: RRGLRKSLPKAVPLVLLEQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...TTCTAACAACACAAGTGGGACAGCTTTTGGCAGGCTTTTCCTGAGGCCTCGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCCCACACCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: PMQSSLEIWREATAKRFHPTPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGTGTGGG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618176.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CTCCATGGTCACAGTCTTTGCATGCGGCAGAACAGGTTTGCAGCGAAGGCTCCCTTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: LHGHSLCMRQNRFAAKAPFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...GGGAGCCTTCGCTGCAAACCTGTTCTGCCGCATGCAAAGACTGTGACCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGCAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSRSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQARSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGACTGGCGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: GATCSLGGTILPEVLQTGVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...GCCAGTCTGCAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCAGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: KRADTMHSMEISNLGYSFVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAATCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TACTGCAAAGTCAGGCAGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGACCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: YCKVRQCWSLCSHLWKFGPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...TCCAAATTTCCAAAGATGACTGCATAGGGACCAACACTGCCTGACTTTGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAAAGCATCAGGACTCATaGCAGGAACGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AAASSSLDQESRGPYFRKKHQDS*QERPSV
Trigger: CACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTT...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCGGGGGCCCCGTCCCTaGCGGTGTTCTTCATATCGA +
Preference number: 5 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPRGPRP*RCSSYR
Trigger: TCGATATGAAGAACACCGCAAGGGACGGGGCCCCCG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: QASGATCSLGGTILPEVLVIFGN*ERGHCK
Trigger: TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGAC...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAACACCCCACTAGCCTaGTGGTGGGCAAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFNTPLA*WWAKAP
Trigger: TGGAGCTTTTGCCCACCACAAGGCTAGTGGGGTGTT...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS GCA 90 bp AGGGCGGGCTTCTCATTCAGAGTATTGGAACGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGAGAAGAACGGCTTATTTCTTTATCA +
Preference number: 5 (lower is better)
Translates to: RAGFSFRVLERSLKG*SKAGEGEERLISLS
Trigger: TGATAAAGAAATAAGCCGTTCTTCTCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGRMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCCCGTCCCTTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGTTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: PRPLRCSSYRFREANCAVLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...CACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAAGGGACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: RTVQCSHSIYWSLSPRGVLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...CACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTGTGACAACCAAGTGGGTAAAATCTGCCCTCACCTGCCTGCTACTGTCCAGGAAGTTTTGTCTTTTGTaGGTGGCTCTAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: VVTTKWVKSALTCLLLSRKFCLL*VALVVI
Trigger: TATCACCACTAGAGCCACCAACAAAAGACAAAACTT...CCTGGACAGTAGCAGGCAGGTGAGGGCAGATTTTACCCACTTGGTTGTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCGATGGTGGAAAAGTTTaGTCTTTTGTTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPDGGKV*SFVGGS
Trigger: AGAGCCACCAACAAAAGACAAAACTTTTCCACCATC...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPLRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: KRADTMHSMEISNLGYSFLKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRLKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTTCTCTCCCAGGGATTaGTCCGAGTTTATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTFSPRD*SEFMEE
Trigger: TTCTTCCATAAACTCGGACAAATCCCTGGGAGAGAA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: KRTVQCSHSIYWSLSPRGSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...CCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCACTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCAACCATGGTCACAGTCTTaGCATGCGGCAGAACAGGTT +
Preference number: 5 (lower is better)
Translates to: RADTMHSMEISNLGYSFQPWSQS*HAAEQV
Trigger: AACCTGTTCTGCCGCATGCAAAGACTGTGACCATGG...TTGGAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEVIFGN*ERGHCK
Trigger: TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGAC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTGTTCCACACCTTTCTaGGAGAACATGGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFCSTPF*ENMEKL
Trigger: CAGCTTTTCCATGTTCTCCAAGAAAGGTGTGGAACA...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCCACAAAGGCAGGCATTaGACCTTGAAGGTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: LALHSDICWNGLQQATMLHKGRH*TLKVLK
Trigger: CTTTAACACCTTCAAGGTCAAATGCCTGCCTTTGTG...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp GTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCGTGGGGTGTCACAGGAGGGCTTTTCAGTATaGTTATTTGGTACACACTTA +
Preference number: 5 (lower is better)
Translates to: VQCSHSIYWSLSPRGVSQEGFSV*LFGTHL
Trigger: TAAGTGTGTACCAAATAACAATACTGAAAAGCCCTC...CTGTGACACCCCACGGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS TCA 90 bp ACATGCTTAAGATCTCCTCCCACATCAGCCAATTTCATGTCAAACTaGACAGAGAGTGCATCTTCAGAGTCCTCCTTGCCAACACTGCTG +
Preference number: 5 (lower is better)
Translates to: TCLRSPPTSANFMSN*TESASSESSLPTLL
Trigger: CAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTCTCTGTTCAGTTTGACATGAAATTGGCTGATGTGGGAGGAGATCTTAAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 90 bp GTCATAGAAAAGCCACTTAAAGTTGGAATAGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTCATTGCAGGAACGCCCCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: VIEKPLKVGIGAAGN*FKASGLIAGTPLCV
Trigger: AACACAGAGGGGCGTTCCTGCAATGAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCCTATTCCAACTTTAAGTGGCTTTTCTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCATTCCCATAATGCCTaGCATATTAGGCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPHSHNA*HIRLHD
Trigger: GTCATGCAGCCTAATATGCAAGGCATTATGGGAATG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SGKRTVQCSHSIYWSLSPQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...GGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: QASGATCSLGGTILPEVLQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCCTTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: QGSELCSARILFIGPCHPLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...GGGGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTLRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTATTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGC +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILFVRGF*RGTTGR
Trigger: GCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAA...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTGTTGGTCCCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAATTTGGTTCGACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: SVGPYAVIFGNLERGHCKFGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAA...TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGGGACCAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCTTTGGTTCGACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSFGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAA...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGTTTTCTGCCCTGAGTaGCATCATCCCTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: PMQSSLEIWREATAKRFHVFCPE*HHPCLT
Trigger: GGTCAGACAGGGATGATGCAACTCAGGGCAGAAAAC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCAAAGTCAGGCAGTGTaGGTCCCTATGCAGTCATCT +
Preference number: 5 (lower is better)
Translates to: FGNLERGHCKEISFHCLSQSQAV*VPMQSS
Trigger: AGATGACTGCATAGGGACCAACACTGCCTGACTTTG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCACAGCTCTTAGCCACTaGGGTTTTTCCCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: LALHSDICWNGLQQATMLTALSH*GFSPNF
Trigger: AAAATTAGGGGAAAAACCCAAGTGGCTAAGAGCTGT...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCAGGCAGGCATTTGACCTaGAAGGTGTTAAAGGGAATT +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSGRHLT*KVLKGI
Trigger: AATTCCCTTTAACACCTTCAAGGTCAAATGCCTGCC...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS TCA 90 bp GACAAATGGAGAGAGTTTTCTGCCCTGAGTTGCATCATCCCTGTCTaGCCAGTCATAGCTTGTAAGTGTGCTCACTGCAAAATTGCTACT +
Preference number: 5 (lower is better)
Translates to: DKWREFSALSCIIPV*PVIACKCAHCKIAT
Trigger: AGTAGCAATTTTGCAGTGAGCACACTTACAAGCTATGACTGGTCAGACAGGGATGATGCAACTCAGGGCAGAAAACTCTCTCCATTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000612223.5
ENST00000613407.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000633429.1
CDS TCA 90 bp CAGGTAAGGGTATTTCAGACTGAAGCGAACAGAATGGATAAAGCTTaGAAGAACATGGTCAGTTTGGAGTCATGCTGGCAAGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QVRVFQTEANRMDKA*KNMVSLESCWQGWS
Trigger: ACTCCAGCCTTGCCAGCATGACTCCAAACTGACCATGTTCTTTCAAGCTTTATCCATTCTGTTCGCTTCAGTCTGAAATACCCTTACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATTCCCGCTGCTGGCATaGGTCCCATTGGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSFPLLA*VPLVFL
Trigger: CAGGAATACCAATGGGACCAATGCCAGCAGCGGGAA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LPRQLLSRPELLSHCIFELFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: FGNLERGHCKEISFHCLSLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAGTCCTGTTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: QASGATCSLGGTILPEVLFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...CAGGACTTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTTGCCCTGCATTCTGACATTTGCTGGAATGGTCTACAGCAGGCTACAATGCTCAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LALHSDICWNGLQQATMLRMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...GAGCATTGTAGCCTGCTGTAGACCATTCCAGCAAATGTCAGAATGCAGGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAAAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPERMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTGCGGTGTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCAAGTTTTGTCTTTTGTaGGTGGCTCTAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: LRCSSYRFREANCAVLAFKFCLL*VALVVI
Trigger: TATCACCACTAGAGCCACCAACAAAAGACAAAACTT...GAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAACACCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCAAGTTTTGTCTTTTGTaGGTGGCTCTAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTKFCLL*VALVVI
Trigger: TATCACCACTAGAGCCACCAACAAAAGACAAAACTT...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGATGGTGGAAAAGTTTaGTCTTTTGTTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPDGGKV*SFVGGS
Trigger: AGAGCCACCAACAAAAGACAAAACTTTTCCACCATC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCACCCAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: FREANCAVLAFYLLVPVTQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...GGTGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAACTGTGCTGCCCACGTaGCTGGTTAGAGGAACAGGA +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILTVLPT*LVRGTG
Trigger: TCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAGT...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTRSSRV*STLHCA
Trigger: AGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: LCSHLWKFGERPLQRDFILKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTCTTCAGAGTCCTCCTaGCCAACACTGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLSSESS*PTLLPP
Trigger: TGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LIHRIWASVKMSILHGCRTKVVT*ERDVMV
Trigger: CACCATGACATCTCTCTCCAAAGTAACGACCTTTGT...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RFREANCAVLAFYLLVPVVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...GACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSVRSLY*SRMTGR
Trigger: CCTGCCCGTCATCCGAGACAAGTACAAAGACCTGAC...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: LCSHLWKFGERPLQRDFISPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCA +
Preference number: 5 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPPSSTR*VTLYTS
Trigger: TGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATTTGGTTCGACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAFGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCTGGGCCTAGGGCTTaGTGGCCAACTTCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKPGPRA*WPTSEV
Trigger: TACTTCTGAAGTTGGCCACAAAGCCCTAGGCCCAGG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGAGTTTTCTGCCCTGAGTaGCATCATCCCTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGVFCPE*HHPCLT
Trigger: GGTCAGACAGGGATGATGCAACTCAGGGCAGAAAAC...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAGTCATCTTTGGAAATTaGGAGAGAGGCCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: LIHRIWASVKMSILHGCRVIFGN*ERGHCK
Trigger: TTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGAC...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAACAAAGTCAGGCAGTGTaGGTCCCTATGCAGTCATCT +
Preference number: 5 (lower is better)
Translates to: GVTKPTILGKENGDYTKEQSQAV*VPMQSS
Trigger: AGATGACTGCATAGGGACCAACACTGCCTGACTTTG...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGAAACACCCCACTAGCCTaGTGGTGGGCAAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HGKYPHISSTSSISSMSRNTPLA*WWAKAP
Trigger: TGGAGCTTTTGCCCACCACAAGGCTAGTGGGGTGTT...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTCGTGTCCCACACTCCTaGGATCCCTATTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTRVPHS*DPYWWH
Trigger: ATGCCACCAATAGGGATCCAAGGAGTGTGGGACACG...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CAGGGCTGGTCTCTAACTCCTGGGAAACATTCTTATTGCAAAGGTAGATTCTGCGGCAGGCATTTGACCTaGAAGGTGTTAAAGGGAATT +
Preference number: 5 (lower is better)
Translates to: QGWSLTPGKHSYCKGRFCGRHLT*KVLKGI
Trigger: AATTCCCTTTAACACCTTCAAGGTCAAATGCCTGCC...GCAGAATCTACCTTTGCAATAAGAATGTTTCCCAGGAGTTAGAGACCAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTAAACTACCTGGTTTCTaGGGGTGCGATGCTGGAGTA +
Preference number: 5 (lower is better)
Translates to: FPPKTVVIQTRALKPLYIKLPGF*GCDAGV
Trigger: TACTCCAGCATCGCACCCCAAGAAACCAGGTAGTTT...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp TTTTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTCCTCCCAAGACAGTaGTTATCCAGACCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: FFLPRQLLSRPELLSHCIFLPRQ*LSRPEL
Trigger: GAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA...TATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp TTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTTTCCTCCCAAGACAGTaGTTATCCAGACCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: FLPRQLLSRPELLSHCIFFLPRQ*LSRPEL
Trigger: GAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA...AAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCACATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSHRKSL*LHRHQA
Trigger: GGCCTGATGCCGATGCAGCAACAAGGATTTCCTATG...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGACATTCCCATAATGCCTaGCATATTAGGCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRHSHNA*HIRLHD
Trigger: GTCATGCAGCCTAATATGCAAGGCATTATGGGAATG...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTCTCTTCTCTCCTGTCTaGGGTTTCACACTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: FLPRQLLSRPELLSHCIFLFSPV*GFTLLK
Trigger: TTTGAGCAGTGTGAAACCCAAGACAGGAGAGAAGAG...AAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp AGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGAATTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: SEQASGATCSLGGTILPEFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...TTCAGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SIQGSELCSARILFIGPCVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACACAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: RKVLINGHSSSGVKRADTQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYLKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAG +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKLKTSY*VDAAVE
Trigger: CTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCCCCTTCCAGAGAAAGTaGTCTGAAGACATCGTACTT +
Preference number: 5 (lower is better)
Translates to: KRADTMHSMEISNLGYSFPFQRK*SEDIVL
Trigger: AAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGG...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAAACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: AAASSSLDQESRGPYFRKTKVVT*ERDVMV
Trigger: CACCATGACATCTCTCTCCAAAGTAACGACCTTTGT...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGAAAAGTGCTTATTAATGGCCATTCAAGCAGTGGGGTGAAGCGGGCTGACACATCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: RKVLINGHSSSGVKRADTSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...TGTGTCAGCCCGCTTCACCCCACTGCTTGAATGGCCATTAATAAGCACTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGAGATTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: RGHCKEISFHCLSKSCLRFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...TCTCAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSFSFRV*ERSLKG
Trigger: GCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGTCTCCCGTCAGGTCTTaGTACTTGTCTCGGATGACG +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKSPVRS*YLSRMT
Trigger: CGTCATCCGAGACAAGTACAAAGACCTGACGGGAGA...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTGCTTCACAGAGGAGTaGTTCAGAGCAGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLCFTEE*FRAGQA
Trigger: TGCCTGACCTGCTCTGAACAACTCCTCTGTGAAGCA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGTTTTCTGCCCTGAGTaGCATCATCCCTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYVFCPE*HHPCLT
Trigger: GGTCAGACAGGGATGATGCAACTCAGGGCAGAAAAC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGTTTTCTGCCCTGAGTaGCATCATCCCTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLVFCPE*HHPCLT
Trigger: GGTCAGACAGGGATGATGCAACTCAGGGCAGAAAAC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACTCGCATTCTATTTATaGGTCCCTGTCACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILLAFYL*VPVTPW
Trigger: CCACGGGGTGACAGGGACCAATAAATAGAATGCGAG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGGTGCCACGTGCAGTTaGGGTGGGACAATTTTACCT +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILGATCS*GGTILP
Trigger: AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTCCATGGTCACAGTCTTaGCATGCGGCAGAACAGGTT +
Preference number: 5 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPPWSQS*HAAEQV
Trigger: AACCTGTTCTGCCGCATGCAAAGACTGTGACCATGG...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGAGACGTGTGCCCTAGATaGGTAGTTCTTCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGDVCPR*VVLPRN
Trigger: ATTCCTGGGAAGAACTACCAATCTAGGGCACACGTC...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp TTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCCTAAGCCTACCATCCTaGGTAAGGAAAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: FGNLERGHCKEISFHCLSLSLPS*VRKMGI
Trigger: AATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAG...GGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS CCA 90 bp GAGTTTCCCTGGGAAGCCCAGATGACATCAGAATGGGATACAGTTTaGCAGTATCTATTCCAGTTGGAGTCATTGTGGTTTCTAAGATTT +
Preference number: 5 (lower is better)
Translates to: EFPWEAQMTSEWDTV*QYLFQLESLWFLRF
Trigger: AAATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGGGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS-3UTR CAA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAG +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYDHRKS*LLHRHQ
Trigger: CTGATGCCGATGCAGCAACAAGGATTTCCTATGGTC...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: LPRQLLSRPELLSHCIFEQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp ATAAGTGAGCAAGCTTCTGGTGCCACGTGCAGTTTGGGTGGGACAATTTTACCTTCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: ISEQASGATCSLGGTILPSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...AGGTAAAATTGTCCCACCCAAACTGCACGTGGCACCAGAAGCTTGCTCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTCATTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: DSGKRTVQCSHSIYWSLSLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...TGACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCCTGTTTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: SIQGSELCSARILFIGPCLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...ACAGGGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGAAAGTTTTGTCTTTTGTaGGTGGCTCTAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: LIHRIWASVKMSILHGCRKFCLL*VALVVI
Trigger: TATCACCACTAGAGCCACCAACAAAAGACAAAACTT...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGATGGTGGAAAAGTTTaGTCTTTTGTTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSDGGKV*SFVGGS
Trigger: AGAGCCACCAACAAAAGACAAAACTTTTCCACCATC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAGCGGGCTGACACAATGCACAGTATGGAAATAAGTAACCTTGGCTACAGTTTCTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KRADTMHSMEISNLGYSFLRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...GAAACTGTAGCCAAGGTTACTTATTTCCATACTGTGCATTGTGTCAGCCCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCATTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQALRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYTKVVT*ERDVMV
Trigger: CACCATGACATCTCTCTCCAAAGTAACGACCTTTGT...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCAGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQAVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTGACGTGTGCCCTAGATaGGTAGTTCTTCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTDVCPR*VVLPRN
Trigger: ATTCCTGGGAAGAACTACCAATCTAGGGCACACGTC...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS CCA 90 bp GAGCATTATTGCTTGCTGATATCTGTGAGAAACAATGGGTGTATCTaGACAGAGGTGTACTTACTATTCTTTGGGACCAATCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: EHYCLLISVRNNGCI*TEVYLLFFGTNPLL
Trigger: GAGAAGTGGATTGGTCCCAAAGAATAGTAAGTACACCTCTGTCCAGATACACCCATTGTTTCTCACAGATATCAGCAAGCAATAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLHSNRS*GHLRAV
Trigger: TACAGCTCTCAGATGTCCCAAGGACCTATTGCTATG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: PMQSSLEIWREATAKRFHQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTTCCTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTCAAAAGTCTGAGCTTTaGCTTCTGCTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: FPPKTVVIQTRALKPLYIQKSEL*LLLFKL
Trigger: CAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTG...AATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS-3UTR CAA 90 bp GCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAACAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: AAASSSLDQESRGPYFRKQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...TTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTACTTCACAGGACAGTAAGTGTCCTAGATAAAAACAAGCACTGGCTCCAAGCAAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LLHRTVSVLDKNKHWLQARMGYS*AVSIPV
Trigger: AACTGGAATAGATACTGCCAAACTGTATCCCATTCT...TGCTTGGAGCCAGTGCTTGTTTTTATCTAGGACACTTACTGTCCTGTGAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTAATACACAGGATTTGGGCCTCTGTCAAAATGAGCATTCTTCACGGCTGCAGATCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: LIHRIWASVKMSILHGCRSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...TCTGCAGCCGTGAAGAATGCTCATTTTGACAGAGGCCCAAATCCTGTGTATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp GAGAGAGGCCACTGCAAAGAGATTTCATTCCACTGCCTTTCCAAATCTTGTCTGTCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: ERGHCKEISFHCLSKSCLSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...CAGACAAGATTTGGAAAGGCAGTGGAATGAAATCTCTTTGCAGTGGCCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAAGTTTTGTCTTTTGTaGGTGGCTCTAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFKFCLL*VALVVI
Trigger: TATCACCACTAGAGCCACCAACAAAAGACAAAACTT...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATTCTCTCCCAGGGATTaGTCCGAGTTTATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGFSPRD*SEFMEE
Trigger: TTCTTCCATAAACTCGGACAAATCCCTGGGAGAGAA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp GCAGTCGCCCATTCTAGTCCCGCAACGGTAATCTATTTTTCTTCAAATGTCAGTGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: AVAHSSPATVIYFSSNVSVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...ACTGACATTTGAAGAAAAATAGATTACCGTTGCGGGACTAGAATGGGCGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: NTAAASSSLDQESRGPYFSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...GAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: PMQSSLEIWREATAKRFHVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...ATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TTCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTTGGTTCGACACAGTaGATCCAGAAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: FFKCQFFTVSILQQQVLPFGSTQ*IQKLAQ
Trigger: CTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAA...AGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGGTGCCCAGGCATGTTTaGGGAAAAAGTCTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKVPRHV*GKSLES
Trigger: ACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCAC...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATTGGTCCGAGGGCTTTTCAGTATaGTTATTTGGTACACACTTA +
Preference number: 5 (lower is better)
Translates to: HIDSGKRTVQCSHSIYWSEGFSV*LFGTHL
Trigger: TAAGTGTGTACCAAATAACAATACTGAAAAGCCCTC...GGACCAATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS GCA 90 bp GGACTGGCTTCCTCTTTAAGGGCATCATATTTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTATTACTGAAAGCCATAAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: GLASSLRASYLSSGF*SDEIELLLKAIKSA
Trigger: TGCAGATTTTATGGCTTTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTTAAAGAGGAAGCCAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTCATTCCCATAATGCCTaGCATATTAGGCTGCATGAC +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLHSHNA*HIRLHD
Trigger: GTCATGCAGCCTAATATGCAAGGCATTATGGGAATG...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILHAGSY*FLKKQA
Trigger: TGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GTTCTTCATATCGATTCAGGGAAGCGAACTGTGCAGTGCTCGCATTCTATTTATGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VLHIDSGKRTVQCSHSIYVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...ATAAATAGAATGCGAGCACTGCACAGTTCGCTTCCCTGAATCGATATGAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp GGAGTGACTAAGCCTACCATCCTTGGTAAGGAAAATGGGGATTATACTAAGGAAGTATTTTCAGAGGACTaGTCAGCTGCAATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GVTKPTILGKENGDYTKEVFSED*SAAIPL
Trigger: TAAAGGAATTGCAGCTGACAAGTCCTCTGAAAATAC...TTCCTTAGTATAATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAGTCACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTATGCAGTCATCTTTGGAAATTTGGAGAGAGGCCACTGCAAAGAGATTTCATTTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LCSHLWKFGERPLQRDFILRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...AATGAAATCTCTTTGCAGTGGCCTCTCTCCAAATTTCCAAAGATGACTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCCCTTCCAGAGAAAGTaGTCTGAAGACATCGTACTT +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYPFQRK*SEDIVL
Trigger: AAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAACCCTTCCAGAGAAAGTaGTCTGAAGACATCGTACTT +
Preference number: 5 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEPFQRK*SEDIVL
Trigger: AAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGG...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLTKVVT*ERDVMV
Trigger: CACCATGACATCTCTCTCCAAAGTAACGACCTTTGT...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGCCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTACCTAATACACAGGATTaGGGCCTCTGTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILPNTQD*GLCQNE
Trigger: CTCATTTTGACAGAGGCCCAAATCCTGTGTATTAGG...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGCTAAGCCTACCATCCTaGGTAAGGAAAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKLSLPS*VRKMGI
Trigger: AATCCCCATTTTCCTTACCAAGGATGGTAGGCTTAG...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACCACAAAGGCAGGCATTaGACCTTGAAGGTGTTAAAG +
Preference number: 5 (lower is better)
Translates to: KTIPYSRKHEPFLSKIQYHKGRH*TLKVLK
Trigger: CTTTAACACCTTCAAGGTCAAATGCCTGCCTTTGTG...GTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp CTCCCAAGACAGTTGTTATCCAGACCAGAGCTCTTAAGCCACTGTATATTTGAGAGGAAGAGTTCTACATaGACTTTTCACACACACATA +
Preference number: 5 (lower is better)
Translates to: LPRQLLSRPELLSHCIFERKSST*TFHTHI
Trigger: TATGTGTGTGTGAAAAGTCAATGTAGAACTCTTCCT...CTCAAATATACAGTGGCTTAAGAGCTCTGGTCTGGATAACAACTGTCTTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1
CDS TCA 90 bp AAATCACTGAATGAGTCATCAAGGGATCCTGACTTAGAAGCATCTTaGAAATCCTGGAAGTCATCTTCTTCTGGCTTTACTACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KSLNESSRDPDLEAS*KSWKSSSSGFTTCV
Trigger: AACACAGGTAGTAAAGCCAGAAGAAGATGACTTCCAGGATTTTCAAGATGCTTCTAAGTCAGGATCCCTTGATGACTCATTCAGTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610513.2
ENST00000614941.4
CDS GCA 90 bp AGTAGAAATACAATTTATGCGTCTAGAAGGTTTAACTTGTGTTGGTaGAGCAGTCCTGGAAATACCAGCACTCTATGGTCACATTCCTTA +
Preference number: 5 (lower is better)
Translates to: SRNTIYASRRFNLCW*SSPGNTSTLWSHSL
Trigger: TAAGGAATGTGACCATAGAGTGCTGGTATTTCCAGGACTGCTGCACCAACACAAGTTAAACCTTCTAGACGCATAAATTGTATTTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS-3UTR CAA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAGAAAAGTTTTGTCTTTaGTTGGTGGCTCTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLEKFCL*LVALVV
Trigger: CACCACTAGAGCCACCAACAAAAGACAAAACTTTTC...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGATGGTGGAAAAGTTTaGTCTTTTGTTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEDGGKV*SFVGGS
Trigger: AGAGCCACCAACAAAAGACAAAACTTTTCCACCATC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AGCAAGTTCTTCCTTAGATCAAGAAAGCCGTGGTCCGTATTTCAGAAAATCTTAGATGGTGGAAAAGTTTaGTCTTTTGTTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SKFFLRSRKPWSVFQKILDGGKV*SFVGGS
Trigger: AGAGCCACCAACAAAAGACAAAACTTTTCCACCATC...TAAGATTTTCTGAAATACGGACCACGGCTTTCTTGATCTAAGGAAGAACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGACAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAATTCAGTACTTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: RQFPTPGSMSLFYLKFSTLRASY*SSGFCS
Trigger: TGAGCAAAAGCCGGATGACAAATATGATGCCCTTAA...AGTACTGAATTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp TCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAGTTGCCAGCTCACTTTaGATCATTTCTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SVLHSFNTAAASSSLDQEVASSL*IISSLD
Trigger: ATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAAC...TTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp AAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTAAAAACAGCTCTTAGCCACTaGGGTTTTTCCCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: KWQRQFPTPGSMSLFYLKTALSH*GFSPNF
Trigger: AAAATTAGGGGAAAAACCCAAGTGGCTAAGAGCTGT...TTTTAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS GCA 90 bp AGGGCTTTGTGGCCAACTTCAGAAGTATTTAATTTAATTTGTTCCTaGCCAGATGTACTTATATCACAAGATACTAGGAACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RALWPTSEVFNLICS*PDVLISQDTRNFSS
Trigger: GGAGGAGAAGTTCCTAGTATCTTGTGATATAAGTACATCTGGGCAGGAACAAATTAAATTAAATACTTCTGAAGTTGGCCACAAAGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000619976.1
ENST00000633128.1
ENST00000633880.1
CDS GCA 90 bp TACCTGAAGGTTAAGGTGGCGTGTAAAACCTTAGAGAAATGTTTATaGAGCTGTCTATGCAAACAACAGAAATCTGAAGGCTTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: YLKVKVACKTLEKCL*SCLCKQQKSEGLKD
Trigger: GTCTTTTAAGCCTTCAGATTTCTGTTGTTTGCATAGACAGCTGCATAAACATTTCTCTAAGGTTTTACACGCCACCTTAACCTTCAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CCA 90 bp GAATGGGATACAGTTTGGCAGTATCTATTCCAGTTGGAGTCATTGTaGTTTCTAAGATTTTCTTATAGGCATCTGGAACCAAACTCTCAT +
Preference number: 5 (lower is better)
Translates to: EWDTVWQYLFQLESL*FLRFSYRHLEPNSH
Trigger: ATGAGAGTTTGGTTCCAGATGCCTATAAGAAAATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS-3UTR CAA 90 bp CTCAGCAACAGCTGTTTAATGAAAATGTTCCACACCTTTCTTGGAGAACATGGATTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: LSNSCLMKMFHTFLGEHGFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...TCCATGTTCTCCAAGAAAGGTGTGGAACATTTTCATTAAACAGCTGTTGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTACAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLQYLFQ*ESLWFL
Trigger: TAGAAACCACAATGACTCCAACTGGAATAGATACTG...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp AGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCAAGAAAGCAGAGGGTTTTTCACTaGTGTTTGTTGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSSQFQYCSSKFFLRSRKQRVFH*CLLFLL
Trigger: CAACAGAAACAACAAACACAAGTGAAAAACCCTCTG...CTTTCTTGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CCAGCATTTCCTATTTCTGTAACATACAGCCCTATAATCTTTGCAAAGCTGAAGGTTTTCATATTCCTTTaGCTCACTGGTCTGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PAFPISVTYSPIIFAKLKVFIFL*LTGLRN
Trigger: ATTCCTCAGACCAGTGAGCAAAAGGAATATGAAAAC...CTTCAGCTTTGCAAAGATTATAGGGCTGTATGTTACAGAAATAGGAAATGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp ATTAAATGGCAAAGACAATTCCCTACTCCAGGAAGCATGAGCCTTTTCTATCTATCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: IKWQRQFPTPGSMSLFYLSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...TAGATAGAAAAGGCTCATGCTTCCTGGAGTAGGGAATTGTCTTTGCCATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
CDS-3UTR CAA 90 bp TCTTCAAATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACT +
Preference number: 5 (lower is better)
Translates to: SSNVSSSQFQYCSSKFFLSLDFI*LCEVAT
Trigger: AGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGA...AAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS TCA 90 bp TTCCTCTTTAAGGGCATCATATTTGTCATCCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAAAGCCATAAAATCTGCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: FLFKGIIFVIRLLLR*NRAITESHKICKVI
Trigger: GATGACTTTGCAGATTTTATGGCTTTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTTAAAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS-3UTR CAA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSFQLES*WFLRFS
Trigger: AGAAAATCTTAGAAACCACAATGACTCCAACTGGAA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS-3UTR CAA 90 bp CATGGAAAATATCCTCATATATCCAGTACCTCTTCTATCTCAAGCATGTCCAGATCTTCTTTTGTAAGTTaGCCAGGTGTAGTTCGATTA +
Preference number: 5 (lower is better)
Translates to: HGKYPHISSTSSISSMSRSSFVS*PGVVRL
Trigger: TAATCGAACTACACCTGGCAAACTTACAAAAGAAGA...TCTGGACATGCTTGAGATAGAAGAGGTACTGGATATATGAGGATATTTTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS-3UTR CAA 90 bp AATGTCAGTTCTTCACAGTTTCAATACTGCAGCAGCAAGTTCTTCCTTAGATCATTAAACACAGCATATTaGTCCATTGAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: NVSSSQFQYCSSKFFLRSLNTAY*SIEGNA
Trigger: AGCATTGCCTTCAATGGACAAATATGCTGTGTTTAA...TGATCTAAGGAAGAACTTGCTGCTGCAGTATTGAAACTGTGAAGAACTGACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000621136.4
ENST00000632841.1
CDS CCA 72 bp AGCTCCCGCGGCCCCGCCGCCACCAGAACCAGCTCCTaGCCGCAGCGCCATCTTGCTCCCGACCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SSRGPAATRTSS*PQRHLAPDLPL
Trigger: CAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCCAGGAGCTGGTTCTGGTGGCGGCGGGGCCGCGGGAGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633880.1
CDS GCA 72 bp CCTGGCCGCAGCGCCATCTTGCTCCCGACCTGCCGCTaGCTTCGCCGCCGCCACCTTATCAGCAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PGRSAILLPTCR*LRRRHLISSCQ
Trigger: CTGACAGCTGCTGATAAGGTGGCGGCGGCGAAGGCAGCGGCAGGTCGGGAGCAAGATGGCGCTGCGGCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000633880.1
CDS GCA 72 bp CGGCATCAGGCCTGCTTGAGGGGGTCTTATCCCACCTaGAACAGGAAACATGAAGCCGCCTCCCCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: RHQACLRGSYPT*NRKHEAASPGG
Trigger: TCCGCCGGGGGAGGCGGCTTCATGTTTCCTGTTGCAGGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633880.1
CDS GCA 72 bp CATCGGCATCAGGCCTTGAGGGGGTCTTATCCCACCTaGAACAGGAAACATGAAGCCGCCTCCCCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: HRHQALRGSYPT*NRKHEAASPGG
Trigger: TCCGCCGGGGGAGGCGGCTTCATGTTTCCTGTTGCAGGTGGGATAAGACCCCCTCAAGGCCTGATGCCGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619541.4
ENST00000633429.1
CDS TCA 72 bp CTGTCCAAGGCTGAGGGGCATGGAGCCCGCAGGACCTaGAGGTATCACAGTTGGCTGACTCACCGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: LSKAEGHGARRT*RYHSWLTHRCR
Trigger: CCTACACCGGTGAGTCAGCCAACTGTGATACCTTCAGGTCCTGCGGGCTCCATGCCCCTCAGCCTTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp GGGTGGAGGGGTGGAAAGACTGAAAGGGCTGGGACGTaGAAGAAGGCCCACATGGGGGAACTTCAACAGGCC +
Preference number: 6 (lower is better)
Translates to: GWRGGKTERAGT*KKAHMGELQQA
Trigger: GGCCTGTTGAAGTTCCCCCATGTGGGCCTTCTTCCACGTCCCAGCCCTTTCAGTCTTTCCACCCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS GCA 72 bp CTTGGAGGGAGAGGCTGTGTCCCAGCCTTCTGTGTATaGAACTGGCCAAGTGGGGTGGAGGGGTGGAAAGAC +
Preference number: 6 (lower is better)
Translates to: LGGRGCVPAFCV*NWPSGVEGWKD
Trigger: GTCTTTCCACCCCTCCACCCCACTTGGCCAGTTGCATACACAGAAGGCTGGGACACAGCCTCTCCCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS GCA 72 bp CATCGGCATCAGGCCTTGAGGGGGTCTTATCCCACCTaGAACAGGAAACATGAAGCTGCCGCTGCCTTCGCC +
Preference number: 6 (lower is better)
Translates to: HRHQALRGSYPT*NRKHEAAAAFA
Trigger: GGCGAAGGCAGCGGCAGCTTCATGTTTCCTGTTGCAGGTGGGATAAGACCCCCTCAAGGCCTGATGCCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620424.1
ENST00000632310.1
CDS TCA 72 bp CCAGGGACGCCATGTAAGGCAAAAGGCACTGGACTCTaGCTTGGAGGGAGAGGCTGTGTCCCAGCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: PGTPCKAKGTGL*LGGRGCVPAFC
Trigger: ACAGAAGGCTGGGACACAGCCTCTCCCTCCAAGTCAGAGTCCAGTGCCTTTTGCCTTACATGGCGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS GCA 72 bp GCATGTCTGGAGTGTACTGTGGGCCTGGAGGACGCATaGCCAGGAAGGGTGCTTGTCCTAGGTAAGGCATTC +
Preference number: 6 (lower is better)
Translates to: ACLECTVGLEDA*PGRVLVLGKAF
Trigger: GAATGCCTTACCTAGGACAAGCACCCTTCCTGGGCATGCGTCCTCCAGGCCCACAGTACACTCCAGACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000620424.1
ENST00000621136.4
ENST00000622045.4
ENST00000632310.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
CDS CAA 90 bp TTTGCCCAGGGACGCCATGTAAGGCAAAAGGCACTGGACTCTGACTaGGAGGGAGAGGCTGTGTCCCAGCCTTCTGTGTATGCAACTGGC +
Preference number: 6 (lower is better)
Translates to: FAQGRHVRQKALDSD*EGEAVSQPSVYATG
Trigger: GCCAGTTGCATACACAGAAGGCTGGGACACAGCCTCTCCCTCCAAGTCAGAGTCCAGTGCCTTTTGCCTTACATGGCGTCCCTGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS TCA 72 bp CCACCTCTCCCGTCAGGTCTTTGTACTTGTCTCGGATaGCGGGCAGGGCGGGCTTCTCATTCAGAGTATTGG +
Preference number: 6 (lower is better)
Translates to: PPLPSGLCTCLG*RAGRASHSEYW
Trigger: CCAATACTCTGAATGAGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACAAAGACCTGACGGGAGAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS TCA 72 bp CAGGAAGCGGTGGGGATTATGGTAGGAGAGAGAGAATaGCCCACCTACAGGGAGTGGTGCTCTTCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: QEAVGIMVGERE*PTYREWCSSAP
Trigger: TGGAGCCGAAGAGCACCACTCCCTGTAGGTGGGTCATTCTCTCTCTCCTACCATAATCCCCACCGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS CCA 72 bp TCAGAGCAGGTCAGGCAGGACGAGGCCAGGAGGCTTTaGTTCGACACAGTTGATCCAGAAGTTGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: SEQVRQDEARRL*FDTVDPEVGTA
Trigger: AGCTGTGCCAACTTCTGGATCAACTGTGTCGAACCAAAGCCTCCTGGCCTCGTCCTGCCTGACCTGCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CAA 72 bp CGGATGACGGGCAGGGCGGGCTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGCTGCTCCAAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RMTGRAGFSFRV*ERSLKGCSKAG
Trigger: TCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCCTGCCCGTCATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CAA 90 bp ACTTTGAAACTCTCCAAAGTCATCCGAACATTCGTTCGGGGTTTCTaGAGAGGCACCACTGGACGCTGGGCTGGGACACGTGGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: TLKLSKVIRTFVRGF*RGTTGRWAGTRGLL
Trigger: CAGGAGGCCACGTGTCCCAGCCCAGCGTCCAGTGGTGCCTCTCAAGAAACCCCGAACGAATGTTCGGATGACTTTGGAGAGTTTCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp AGACTGAAAGGGCTGGGACGTGGAAGAAGGCCCACATaGGGGAACTTCAACAGGCCCCTGCATAAAGTCACT +
Preference number: 6 (lower is better)
Translates to: RLKGLGRGRRPT*GNFNRPLHKVT
Trigger: AGTGACTTTATGCAGGGGCCTGTTGAAGTTCCCCCATGTGGGCCTTCTTCCACGTCCCAGCCCTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 72 bp TCATTTTCCTCCACCTCTCCCGTCAGGTCTTTGTACTaGTCTCGGATGACGGGCAGGGCGGGCTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: SFSSTSPVRSLY*SRMTGRAGFSF
Trigger: GAATGAGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTACAAAGACCTGACGGGAGAGGTGGAGGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CAA 72 bp GGACGCCATGTAAGGCAAAAGGCACTGGACTCTGACTaGGAGGGAGAGGCTGTGTCCCAGCCTTCTGTGTAT +
Preference number: 6 (lower is better)
Translates to: GRHVRQKALDSD*EGEAVSQPSVY
Trigger: ATACACAGAAGGCTGGGACACAGCCTCTCCCTCCAAGTCAGAGTCCAGTGCCTTTTGCCTTACATGGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000611910.4
ENST00000614000.4
ENST00000619976.1
ENST00000631497.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 90 bp GACGCAGCAGTCGAGTTTTGTCCACCCTTCACTGTGCTGCCCACGTaGCTGGTTAGAGGAACAGGACTGGCTTCCTCTTTAAGGGCATCA +
Preference number: 6 (lower is better)
Translates to: DAAVEFCPPFTVLPT*LVRGTGLASSLRAS
Trigger: TGATGCCCTTAAAGAGGAAGCCAGTCCTGTTCCTCTAACCAGCAACGTGGGCAGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 72 bp GTCCTTCAGCAACTGCTGGAGTTTCTCACTGCACACTaGAGTGGCTTTTATCCCCAGCTCCACACGCTTGGT +
Preference number: 6 (lower is better)
Translates to: VLQQLLEFLTAH*SGFYPQLHTLG
Trigger: ACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS GCA 72 bp AGGGTAGGTTGGTATGAAACCACTAGAAGCCTGGGCTaGAGCTCCACCCACTGGTCCAACAAGGTTAATGCC +
Preference number: 6 (lower is better)
Translates to: RVGWYETTRSLG*SSTHWSNKVNA
Trigger: GGCATTAACCTTGTTGGACCAGTGGGTGGAGCTGCAGCCCAGGCTTCTAGTGGTTTCATACCAACCTACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp GAAGACATCGTACTTGGTAGACGCAGCAGTCGAGTTTaGTCCACCCTTCACTGTGCTGCCCACGTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: EDIVLGRRSSRV*STLHCAAHVAG
Trigger: ACCAGCAACGTGGGCAGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCGTCTACCAAGTACGATGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp CACACTGCAGTGGCTTTTATCCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCAACAACACCTGACGGG +
Preference number: 6 (lower is better)
Translates to: HTAVAFIPSSTR*VTLYTSTTPDG
Trigger: CCCGTCAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 90 bp GCCTTGCATATTAGGCTGCATGACAGAGACCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCCTGCTTGAGGGGGTCTTATCCCACC +
Preference number: 6 (lower is better)
Translates to: ALHIRLHDRDHRKSL*LHRHQACLRGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 90 bp TACTTGTCTCGGATGACGGGCAGGGCGGGCTTCTCATTCAGAGTATaGGAACGGTCTCTGAAAGGCTGCTCCAAAGCTGGAGAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: YLSRMTGRAGFSFRV*ERSLKGCSKAGEGE
Trigger: TTCTCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCCTGCCCGTCATCCGAGACAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS TCA 72 bp GGGCGGGCTTCTCATTCAGAGTATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTGGAGAAGGAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: GRASHSEYWNGL*KAAPKLEKEKN
Trigger: GTTCTTCTCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS TCA 72 bp CACACGCTTGGTTACCCTGTACACTTCAACAACACCTaGCGGGATGAGAGAGCAGAGAGAGAGTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: HTLGYPVHFNNT*RDERAERECWQ
Trigger: CTGCCAACACTCTCTCTCTGCTCTCTCATCCCGTCAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS GCA 72 bp CTCCTCCAAGGAAGGGCCTGGTTTCTTGGGGTGCGATaGTGGAGTAGGGTGCATTTTTGCATCTCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: LLQGRAWFLGVR*WSRVHFCISGK
Trigger: TTTTCCAGAGATGCAAAAATGCACCCTACTCCAGCATCGCACCCCAAGAAACCAGGCCCTTCCTTGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS GCA 72 bp AACTTCTCCTCCAAGGAAGGGCCTGGTTTCTTGGGGTaGGATGCTGGAGTAGGGTGCATTTTTGCATCTCTG +
Preference number: 6 (lower is better)
Translates to: NFSSKEGPGFLG*DAGVGCIFASL
Trigger: CAGAGATGCAAAAATGCACCCTACTCCAGCATCGCACCCCAAGAAACCAGGCCCTTCCTTGGAGGAGAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612223.5
ENST00000618402.4
CDS CCA 72 bp GCTGAGGGGGATCCACTTCCTGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAATCCAAAGAGCTATCA +
Preference number: 6 (lower is better)
Translates to: AEGDPLPAAGGC*PLTVGKSKELS
Trigger: TGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGCAGGAAGTGGATCCCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS CCA 72 bp ACACTGCAGTGGCTTTTATCCCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAACAACACCTGACGGGA +
Preference number: 6 (lower is better)
Translates to: TLQWLLSPAPHA*LPCTLQQHLTG
Trigger: TCCCGTCAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 72 bp ATTAGGCTGCATGACAGAGACCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCCTGCTTGAGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: IRLHDRDHRKSL*LHRHQACLRGS
Trigger: AGACCCCCTCAAGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 72 bp CATATTAGGCTGCATGACAGAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAGGCCTGCTTGAGGGGG +
Preference number: 6 (lower is better)
Translates to: HIRLHDRDHRKS*LLHRHQACLRG
Trigger: CCCCCTCAAGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 72 bp CCTGGTGGACATCTGCTTATGCAGAACTGTGCCTGTTaGAGCAGGAAAAGAAGACCCCAAGTGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: PGGHLLMQNCAC*SRKRRPQVRWQ
Trigger: CTGCCACCTCACTTGGGGTCTTCTTTTCCTGCTCAAACAGGCACAGTTCTGCATAAGCAGATGTCCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 90 bp AATGCCTTGCATATTAGGCTGCATGACAGAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAGGCCTGCTTGAGGGGGTCTTATCCC +
Preference number: 6 (lower is better)
Translates to: NALHIRLHDRDHRKS*LLHRHQACLRGSYP
Trigger: GGGATAAGACCCCCTCAAGCAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 90 bp CCTAGTCCAGACCCTTCCAGAGAAAGTTGTCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAGTTTTGTCCACCCTTCACTGTGCTG +
Preference number: 6 (lower is better)
Translates to: PSPDPSRESCLKTSY*VDAAVEFCPPFTVL
Trigger: CAGCACAGTGAAGGGTGGACAAAACTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGGTCTGGACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 90 bp AATGCCTTGCATATTAGGCTGCATGACAGAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAGGCCTTGAGGGGGTCTTATCCCACC +
Preference number: 6 (lower is better)
Translates to: NALHIRLHDRDHRKS*LLHRHQALRGSYPT
Trigger: GGTGGGATAAGACCCCCTCAAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAATATGCAAGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000619541.4
ENST00000620424.1
ENST00000632310.1
ENST00000633429.1
CDS GCA 72 bp TGCTGTTCAAATCGTTTCTGCTGCTCTTCGGCAAACTaGTTCTGCATGTCTGGAGTGTACTGTGGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: CCSNRFCCSSAN*FCMSGVYCGPG
Trigger: TCCAGGCCCACAGTACACTCCAGACATGCAGAAGCAGTTTGCCGAAGAGCAGCAGAAACGATTTGAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000620424.1
ENST00000621136.4
ENST00000622045.4
ENST00000632310.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
CDS GCA 72 bp CAGAGAGTGCATCTTCAGAGTCCTCCTTGCCAACACTaGTGCCACCAATGGAAGGGAGATCTAAGGACTTCA +
Preference number: 6 (lower is better)
Translates to: QRVHLQSPPCQH*CHQWKGDLRTS
Trigger: TGAAGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAGATGCACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 72 bp TATCGATGTCCTTCAGCAACTGCTGGAGTTTCTCACTaGACACTGCAGTGGCTTTTATCCCCAGCTCCACAC +
Preference number: 6 (lower is better)
Translates to: YRCPSATAGVSH*TLQWLLSPAPH
Trigger: GTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS CCA 72 bp CTTCAGAGTCCTCCTTGCCAACACTGCTGCCACCAATaGAAGGGAGATCTAAGGACTTCACTGATGCAGAGT +
Preference number: 6 (lower is better)
Translates to: LQSPPCQHCCHQ*KGDLRTSLMQS
Trigger: ACTCTGCATCAGTGAAGTCCTTAGATCTCCCTTCCATTGGTGGCAGCAGTGTTGGCAAGGAGGACTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp CATATTAGGCTGCATGACAGAGACCATAGGAAATCCTaGTTGCTGCATCGGCATCAGGCCTTGAGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: HIRLHDRDHRKS*LLHRHQALRGS
Trigger: AGACCCCCTCAAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000619541.4
ENST00000620424.1
ENST00000632310.1
ENST00000633429.1
CDS CAA 90 bp TTGGCAGTGGAGACACAGAGGACCCAGACAGGGGAGCATTATTGCTaGCTGATATCTGTGAGAAACAATGGGTGTATCTGGACAGAGGTG +
Preference number: 6 (lower is better)
Translates to: LAVETQRTQTGEHYC*LISVRNNGCIWTEV
Trigger: CACCTCTGTCCAGATACACCCATTGTTTCTCACAGATATCAGCAAGCAATAATGCTCCCCTGTCTGGGTCCTCTGTGTCTCCACTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS TCA 72 bp TCCACATTCAAGAGGCACACTCCACAGGCAAGCTCCTaGGCATTTTTAATCCCAGGCCGTAACATACAGGAG +
Preference number: 6 (lower is better)
Translates to: STFKRHTPQASS*AFLIPGRNIQE
Trigger: CTCCTGTATGTTACGGCCTGGGATTAAAAATGCTCAGGAGCTTGCCTGTGGAGTGTGCCTCTTGAATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS TCA 72 bp GGGCGGGCTTCTCATTCAGAGTATTGGAACGGTCTCTaGAAGGCTGCTCCAAAGCTTGAACAGAAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: GRASHSEYWNGL*KAAPKLEQKGQ
Trigger: TTGACCTTTCTGTTCAAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAAGCCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614196.1
CDS TCA 72 bp AACAGTCACCAAAGACATGACCCCGATCTCTCTAAGTaGACACTGGAGGAATTCCAGGGGATCTTCAGAGCG +
Preference number: 6 (lower is better)
Translates to: NSHQRHDPDLSK*TLEEFQGIFRA
Trigger: CGCTCTGAAGATCCCCTGGAATTCCTCCAGTGTTCACTTAGAGAGATCGGGGTCATGTCTTTGGTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS GCA 72 bp GGGAAATACTCCCACACCTGGTTTCTTGGGGTGCGATaGTGGAGTAGGGTGCATTTTTGCATCTCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: GKYSHTWFLGVR*WSRVHFCISGK
Trigger: TTTTCCAGAGATGCAAAAATGCACCCTACTCCAGCATCGCACCCCAAGAAACCAGGTGTGGGAGTATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000610513.2
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CCA 72 bp TTCTTCTGGCTTTACTACCTGATTTGCAGGGTAGGTTaGTATGAAACCACTAGAAGCCTGGGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FFWLYYLICRVG*YETTRSLGCSS
Trigger: GGAGCTGCAGCCCAGGCTTCTAGTGGTTTCATACCAACCTACCCTGCAAATCAGGTAGTAAAGCCAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp ATCCATCTACAGCAACCCCGTTACTGGCCATTAAACTaGGATACTTCTTACTGGAACCTGGGCCTAGGGCTT +
Preference number: 6 (lower is better)
Translates to: IHLQQPRYWPLN*DTSYWNLGLGL
Trigger: AAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTGTAGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000619976.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 72 bp GACCCTTCCAGAGAAAGTTGTCTGAAGACATCGTACTaGGTAGACGCAGCAGTCGAGTTTTGTCCACCCTTC +
Preference number: 6 (lower is better)
Translates to: DPSRESCLKTSY*VDAAVEFCPPF
Trigger: GAAGGGTGGACAAAACTCGACTGCTGCGTCTACCAAGTACGATGTCTTCAGACAACTTTCTCTGGAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp ATTAGGCTGCATGACAGAGACCATAGGAAATCCTTGTaGCTGCATCGGCATCAGGCCTTGAGGGGGTCTTAT +
Preference number: 6 (lower is better)
Translates to: IRLHDRDHRKSL*LHRHQALRGSY
Trigger: ATAAGACCCCCTCAAGGCCTGATGCCGATGCAGCAACAAGGATTTCCTATGGTCTCTGTCATGCAGCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000619541.4
ENST00000620424.1
ENST00000632310.1
ENST00000633429.1
CDS CAA 90 bp AGTGTTGGCAGTGGAGACACAGAGGACCCAGACAGGGGAGCATTATaGCTTGCTGATATCTGTGAGAAACAATGGGTGTATCTGGACAGA +
Preference number: 6 (lower is better)
Translates to: SVGSGDTEDPDRGAL*LADICEKQWVYLDR
Trigger: TCTGTCCAGATACACCCATTGTTTCTCACAGATATCAGCAAGCAATAATGCTCCCCTGTCTGGGTCCTCTGTGTCTCCACTGCCAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CCA 72 bp AAGCCACTTAAAGTTGGAATAGGAGCTGCTGGGAACTaGTTTAAAGCATCAGGACTCATTGCAGGAACGCCC +
Preference number: 6 (lower is better)
Translates to: KPLKVGIGAAGN*FKASGLIAGTP
Trigger: GGGCGTTCCTGCAATGAGTCCTGATGCTTTAAACCAGTTCCCAGCAGCTCCTATTCCAACTTTAAGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp ACTCCCACACACATCCATCTACAGCAACCCCGTTACTaGCCATTAAACTGGGATACTTCTTACTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: TPTHIHLQQPRY*PLNWDTSYWNL
Trigger: CAGGTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTGTAGATGGATGTGTGTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619976.1
ENST00000633880.1
CDS CAA 90 bp ACTTGTAGATGGGACCTGGTGTTTGTTCTGCACCACAATACTGAATaGCCCAACATCAGTACACTGAGCATCCATAGGATGCATGTCAGC +
Preference number: 6 (lower is better)
Translates to: TCRWDLVFVLHHNTE*PNISTLSIHRMHVS
Trigger: GCTGACATGCATCCTATGGATGCTCAGTGTACTGATGTTGGGCAATTCAGTATTGTGGTGCAGAACAAACACCAGGTCCCATCTACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CAA 90 bp GCAGAGACTACATCCCTTCACTCTCCACTCATCCAGCAAATATTTTaGAGTGCCAACTACGTGCAAGACACTAGATTAGGTGTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: AETTSLHSPLIQQIF*SANYVQDTRLGVGD
Trigger: GTCCCCAACACCTAATCTAGTGTCTTGCACGTAGTTGGCACTCAAAAATATTTGCTGGATGAGTGGAGAGTGAAGGGATGTAGTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS TCA 72 bp TGCACCACAATACTGAATTGCCCAACATCAGTACACTaGGCATCCATAGGATGCATGTCAGCATGCTACTGC +
Preference number: 6 (lower is better)
Translates to: CTTILNCPTSVH*ASIGCMSACYC
Trigger: GCAGTAGCATGCTGACATGCATCCTATGGATGCTCAGTGTACTGATGTTGGGCAATTCAGTATTGTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CCA 72 bp AAGGATACTAGGAGAAAAGACAGGTGCCCCATTTCCTaGTGGACATCTGCTTATGCAGAACTGTGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: KDTRRKDRCPIS*WTSAYAELCLF
Trigger: AAACAGGCACAGTTCTGCATAAGCAGATGTCCACCAGGAAATGGGGCACCTGTCTTTTCTCCTAGTATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 72 bp CACACTGCAGTGGCTTTTATCCCCAGCTCCACACGCTaGGTTACCCTGTACACTTCAACAACACCTAATAAA +
Preference number: 6 (lower is better)
Translates to: HTAVAFIPSSTR*VTLYTSTTPNK
Trigger: TTTATTAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS TCA 72 bp TCTCTCCTGTCTTGGGTTTCACACTGCTCAAAAGTCTaGGCTTTTGCTTCTGCTCTTCAAACTGGCGTCTTT +
Preference number: 6 (lower is better)
Translates to: SLLSWVSHCSKV*AFASALQTGVF
Trigger: AAAGACGCCAGTTTGAAGAGCAGAAGCAAAAGCTCAGACTTTTGAGCAGTGTGAAACCCAAGACAGGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000612770.1
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633128.1
ENST00000633203.1
ENST00000633429.1
ENST00000633880.1
CDS GCA 72 bp TTCTCATTCAGAGTATTGGAACGGTCTCTGAAAGGCTaGTCCAAAGCTGGAGAAGGAGAAGAACGGCTTATT +
Preference number: 6 (lower is better)
Translates to: FSFRVLERSLKG*SKAGEGEERLI
Trigger: AATAAGCCGTTCTTCTCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACTCTGAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CCA 72 bp AGTATTGGAACGGTCTCTGAAAGGCTGCTCCAAAGCTaGAGAAGGAGAAGAACGGCTTATTTCTTTATCACC +
Preference number: 6 (lower is better)
Translates to: SIGTVSERLLQS*RRRRTAYFFIT
Trigger: GGTGATAAAGAAATAAGCCGTTCTTCTCCTTCTCCAGCTTTGGAGCAGCCTTTCAGAGACCGTTCCAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CCA 72 bp ACACTGCAGTGGCTTTTATCCCCAGCTCCACACGCTTaGTTACCCTGTACACTTCAACAACACCTAATAAAT +
Preference number: 6 (lower is better)
Translates to: TLQWLLSPAPHA*LPCTLQQHLIN
Trigger: ATTTATTAGGTGTTGTTGAAGTGTACAGGGTAACCAAGCGTGTGGAGCTGGGGATAAAAGCCACTGCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS CCA 72 bp TACCACTTACACATCCATCTACAGCAACCCCGTTACTaGCCATTAAACTGGGATACTTCTTACTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: YHLHIHLQQPRY*PLNWDTSYWNL
Trigger: CAGGTTCCAGTAAGAAGTATCCCAGTTTAATGGCCAGTAACGGGGTTGCTGTAGATGGATGTGTAAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000633128.1
CDS CAA 72 bp CTGGGAAGCCCAGATGACATCAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTTGGAGTCATTGTGGTT +
Preference number: 6 (lower is better)
Translates to: LGSPDDIRMGYS*AVSIPVGVIVV
Trigger: AACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTCTGATGTCATCTGGGCTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS GCA 72 bp CCACTTTGCAACCTTTGGATTAAAAGACATTATCTGTaGTCAGGGAACATGAGCGGAGCTAATGTGCCTACA +
Preference number: 6 (lower is better)
Translates to: PLCNLWIKRHYL*SGNMSGANVPT
Trigger: TGTAGGCACATTAGCTCCGCTCATGTTCCCTGAGCACAGATAATGTCTTTTAATCCAAAGGTTGCAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS GCA 72 bp TTCCATAGATACAAGGATACTAGGAGAAAAGACAGGTaGCCCATTTCCTGGTGGACATCTGCTTATGCAGAA +
Preference number: 6 (lower is better)
Translates to: FHRYKDTRRKDR*PISWWTSAYAE
Trigger: TTCTGCATAAGCAGATGTCCACCAGGAAATGGGGCACCTGTCTTTTCTCCTAGTATCCTTGTATCTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CCA 72 bp TGGGTGTATCTGGACAGAGGTGTACTTACTATTCTTTaGGACCAATCCACTTCTCAATGCTGCTGTATAGCT +
Preference number: 6 (lower is better)
Translates to: WVYLDRGVLTIL*DQSTSQCCCIA
Trigger: AGCTATACAGCAGCATTGAGAAGTGGATTGGTCCCAAAGAATAGTAAGTACACCTCTGTCCAGATACACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 72 bp TCCCATTGGTATTCCTGCCTGCATAGCAATAGGTCCTaGGGACATCTGAGAGCTGTAATTCATTCCCATAAT +
Preference number: 6 (lower is better)
Translates to: SHWYSCLHSNRS*GHLRAVIHSHN
Trigger: ATTATGGGAATGAATTACAGCTCTCAGATGTCCCAAGGACCTATTGCTATGCAGGCAGGAATACCAATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619976.1
ENST00000620424.1
ENST00000621136.4
ENST00000622045.4
ENST00000632310.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
CDS CAA 72 bp ACAAAGAAGGGGCACTGTTTCCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCAACTCTTGGAAATCAC +
Preference number: 6 (lower is better)
Translates to: TKKGHCFHAGSY*FLKKQATLGNH
Trigger: GTGATTTCCAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATGGAAACAGTGCCCCTTCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000621605.1
ENST00000622045.4
ENST00000631497.1
ENST00000632463.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp GGAACAGGACTGGCTTCCTCTTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCAGATGAAATAGAGCTA +
Preference number: 6 (lower is better)
Translates to: GTGLASSLRASY*SSGFCSDEIEL
Trigger: TAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTTAAAGAGGAAGCCAGTCCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp TTTGTAACCGAGTTCCTTCACAGTCTCTCAATCCAGTaGAAATCAACGACCCCTCCTGTCAGGATGAGATTA +
Preference number: 6 (lower is better)
Translates to: FVTEFLHSLSIQ*KSTTPPVRMRL
Trigger: TAATCTCATCCTGACAGGAGGGGTCGTTGATTTCAACTGGATTGAGAGACTGTGAAGGAACTCGGTTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS CAA 72 bp ATGGGTGTATCTGGACAGAGGTGTACTTACTATTCTTaGGGACCAATCCACTTCTCAATGCTGCTGTATAGC +
Preference number: 6 (lower is better)
Translates to: MGVSGQRCTYYS*GPIHFSMLLYS
Trigger: GCTATACAGCAGCATTGAGAAGTGGATTGGTCCCAAAGAATAGTAAGTACACCTCTGTCCAGATACACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 90 bp AGAGTTTCCCTGGGAAGCCCAGATGACATCAGAATGGGATACAGTTaGGCAGTATCTATTCCAGTTGGAGTCATTGTGGTTTCTAAGATT +
Preference number: 6 (lower is better)
Translates to: RVSLGSPDDIRMGYS*AVSIPVGVIVVSKI
Trigger: AATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTCTGATGTCATCTGGGCTTCCCAGGGAAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS CAA 90 bp GCCATTAAACTGGGATACTTCTTACTGGAACCTGGGCCTAGGGCTTaGTGGCCAACTTCAGAAGTATTTAATTTAATTTGTTCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: AIKLGYFLLEPGPRA*WPTSEVFNLICSCP
Trigger: TGGGCAGGAACAAATTAAATTAAATACTTCTGAAGTTGGCCACAAAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCAGTTTAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000619976.1
ENST00000633128.1
ENST00000633880.1
CDS CAA 90 bp TGTTATGGATTTGTAACCGAGTTCCTTCACAGTCTCTCAATCCAGTaGAAATCAACGACCCCTCCTGTCAGGATGAGATTAAAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: CYGFVTEFLHSLSIQ*KSTTPPVRMRLKQK
Trigger: CTTCTGCTTTAATCTCATCCTGACAGGAGGGGTCGTTGATTTCAACTGGATTGAGAGACTGTGAAGGAACTCGGTTACAAATCCATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS TCA 72 bp AATACTCCCACACCACTCTCTTCAATTGACAGGTTTTaGTCTGAAGTATTTTCTGCCTCTGCAGTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: NTPTPLSSIDRF*SEVFSASAVVV
Trigger: TACCACCACTGCAGAGGCAGAAAATACTTCAGATCAAAACCTGTCAATTGAAGAGAGTGGTGTGGGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000633128.1
CDS GCA 72 bp GATAAAAGACTTGTAGATGGGACCTGGTGTTTGTTCTaGACCACAATACTGAATTGCCCAACATCAGTACAC +
Preference number: 6 (lower is better)
Translates to: DKRLVDGTWCLF*TTILNCPTSVH
Trigger: GTGTACTGATGTTGGGCAATTCAGTATTGTGGTGCAGAACAAACACCAGGTCCCATCTACAAGTCTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS GCA 72 bp ACAATTTATGCGTCTAGAAGGTTTAACTTGTGTTGGTaGAGCAGTCCTGGAAATACCAGCACTCTATGGTCA +
Preference number: 6 (lower is better)
Translates to: TIYASRRFNLCW*SSPGNTSTLWS
Trigger: TGACCATAGAGTGCTGGTATTTCCAGGACTGCTGCACCAACACAAGTTAAACCTTCTAGACGCATAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CCA 72 bp CCACTGCTTTCTCTCCCAGGGATTTGTCCGAGTTTATaGAAGAAAATTTACTGGAGTGGAAGTCAGCAAAAT +
Preference number: 6 (lower is better)
Translates to: PLLSLPGICPSL*KKIYWSGSQQN
Trigger: ATTTTGCTGACTTCCACTCCAGTAAATTTTCTTCCATAAACTCGGACAAATCCCTGGGAGAGAAAGCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp TTATTCCATACTTTATCGATGTCCTTCAGCAACTGCTaGAGTTTCTCACTGCACACTGCAGTGGCTTTTATC +
Preference number: 6 (lower is better)
Translates to: LFHTLSMSFSNC*SFSLHTAVAFI
Trigger: GATAAAAGCCACTGCAGTGTGCAGTGAGAAACTCCAGCAGTTGCTGAAGGACATCGATAAAGTATGGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000619914.1
ENST00000621136.4
ENST00000622045.4
ENST00000631955.1
ENST00000632841.1
ENST00000633429.1
CDS CAA 90 bp CTGGTTAGAGGAACAGGACTGGCTTCCTCTTTAAGGGCATCATATTaGTCATCCGGCTTTTGCTCAGATGAAATAGAGCTATTACTGAAA +
Preference number: 6 (lower is better)
Translates to: LVRGTGLASSLRASY*SSGFCSDEIELLLK
Trigger: TTTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTTAAAGAGGAAGCCAGTCCTGTTCCTCTAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 90 bp AAGGTGGTCTCTGGAAGAGCATCTTCACTTACAAAGGTCGTTACTTaGGAGAGAGATGTCATGGTGATGTTTTCAGAACTGCCAAATGAA +
Preference number: 6 (lower is better)
Translates to: KVVSGRASSLTKVVT*ERDVMVMFSELPNE
Trigger: TTCATTTGGCAGTTCTGAAAACATCACCATGACATCTCTCTCCAAAGTAACGACCTTTGTAAGTGAAGATGCTCTTCCAGAGACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS TCA 72 bp CACAATAGTAAAATCTACCTTGGAAGCTACTCACCTTaGACAGAAAGGTCAAAGGTTGCCAGCTCACTTTTG +
Preference number: 6 (lower is better)
Translates to: HNSKIYLGSYSP*TERSKVASSLL
Trigger: CAAAAGTGAGCTGGCAACCTTTGACCTTTCTGTTCAAGGTGAGTAGCTTCCAAGGTAGATTTTACTATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618829.4
ENST00000633948.1
CDS GCA 72 bp TTCTCCAAAATCATCAGCCAAACTAGAAGTTTTTGTTaGTGCCAATGCTGTCATAGTAGCAGCAGAACCTGT +
Preference number: 6 (lower is better)
Translates to: FSKIISQTRSFC*CQCCHSSSRTC
Trigger: ACAGGTTCTGCTGCTACTATGACAGCATTGGCAGCAACAAAAACTTCTAGTTTGGCTGATGATTTTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp TATTTTAAGTCCTCTATATCTGCAGCAGGAGGATGCTaGCCACTAACTGTTGGTAAATCCAAAGAGCTATCA +
Preference number: 6 (lower is better)
Translates to: YFKSSISAAGGC*PLTVGKSKELS
Trigger: TGATAGCTCTTTGGATTTACCAACAGTTAGTGGCCAGCATCCTCCTGCTGCAGATATAGAGGACTTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000612223.5
ENST00000613407.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000633429.1
CDS CCA 72 bp AATACAATTTATGCGTCTAGAAGGTTTAACTTGTGTTaGTGCAGCAGTCCTGGAAATACCAGCACTCTATGG +
Preference number: 6 (lower is better)
Translates to: NTIYASRRFNLC*CSSPGNTSTLW
Trigger: CCATAGAGTGCTGGTATTTCCAGGACTGCTGCACCAACACAAGTTAAACCTTCTAGACGCATAAATTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CCA 72 bp TGCTTGCTGATATCTGTGAGAAACAATGGGTGTATCTaGACAGAGGTGTACTTACTATTCTTTGGGACCAAT +
Preference number: 6 (lower is better)
Translates to: CLLISVRNNGCI*TEVYLLFFGTN
Trigger: ATTGGTCCCAAAGAATAGTAAGTACACCTCTGTCCAGATACACCCATTGTTTCTCACAGATATCAGCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 72 bp CTGGGATACTTCTTACTGGAACCTGGGCCTAGGGCTTaGTGGCCAACTTCAGAAGTATTTAATTTAATTTGT +
Preference number: 6 (lower is better)
Translates to: LGYFLLEPGPRA*WPTSEVFNLIC
Trigger: ACAAATTAAATTAAATACTTCTGAAGTTGGCCACAAAGCCCTAGGCCCAGGTTCCAGTAAGAAGTATCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612223.5
ENST00000614000.4
ENST00000618402.4
ENST00000619976.1
ENST00000633128.1
ENST00000633880.1
CDS TCA 72 bp AGCTGCAATTCCTTTAAACACAGCATATTTGTCCATTaGAGGCAATGCTTTAGTTCCAGGAAGTGGCATCAA +
Preference number: 6 (lower is better)
Translates to: SCNSFKHSIFVH*RQCFSSRKWHQ
Trigger: TTGATGCCACTTCCTGGAACTAAAGCATTGCCTTCAATGGACAAATATGCTGTGTTTAAAGGAATTGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000621605.1
ENST00000622045.4
ENST00000631497.1
ENST00000632463.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS TCA 72 bp AAGAAGTCAAATTTGCTGATTTTGGGCTTTTCACTTTaGAACTCTCCAAAGTCATCCGAACATTCGTTCGGG +
Preference number: 6 (lower is better)
Translates to: KKSNLLILGFSL*NSPKSSEHSFG
Trigger: CCCGAACGAATGTTCGGATGACTTTGGAGAGTTTCAAAGTGAAAAGCCCAAAATCAGCAAATTTGACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 72 bp CCCTGTACACTTCAACAACACCTAATAAATATTCCATaGCTTGAGCTGACTGAATTACTTCTGTGCAAACAG +
Preference number: 6 (lower is better)
Translates to: PCTLQQHLINIP*LELTELLLCKQ
Trigger: CTGTTTGCACAGAAGTAATTCAGTCAGCTCAAGGCATGGAATATTTATTAGGTGTTGTTGAAGTGTACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
CDS GCA 72 bp AGACCTTGCTGTAATATAGGAACACGAAGTCATCACTaGACAGGTGATCTTAGCTATAATAAAGGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: RPCCNIGTRSHH*TGDLSYNKGLA
Trigger: TGCCAAACCTTTATTATAGCTAAGATCACCTGTGCAGTGATGACTTCGTGTTCCTATATTACAGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CAA 72 bp AAACTCTTTTCTACCTGTTTCCATGCTGGGAGTTACTaGTTTTTGAAGAAGCAGGCAACTCTTGGAAATCAC +
Preference number: 6 (lower is better)
Translates to: KLFSTCFHAGSY*FLKKQATLGNH
Trigger: GTGATTTCCAAGAGTTGCCTGCTTCTTCAAAAACAAGTAACTCCCAGCATGGAAACAGGTAGAAAAGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CAA 72 bp AGTAGAAATACAATTTATGCGTCTAGAAGGTTTAACTaGTGTTGGTGCAGCAGTCCTGGAAATACCAGCACT +
Preference number: 6 (lower is better)
Translates to: SRNTIYASRRFN*CWCSSPGNTST
Trigger: AGTGCTGGTATTTCCAGGACTGCTGCACCAACACAAGTTAAACCTTCTAGACGCATAAATTGTATTTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614000.4
ENST00000633128.1
CDS CAA 90 bp TCAGAATGGGATACAGTTTGGCAGTATCTATTCCAGTTGGAGTCATaGTGGTTTCTAAGATTTTCTTATAGGCATCTGGAACCAAACTCT +
Preference number: 6 (lower is better)
Translates to: SEWDTVWQYLFQLES*WFLRFSYRHLEPNS
Trigger: AGAGTTTGGTTCCAGATGCCTATAAGAAAATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS CAA 90 bp CAGATGACATCAGAATGGGATACAGTTTGGCAGTATCTATTCCAGTaGGAGTCATTGTGGTTTCTAAGATTTTCTTATAGGCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: QMTSEWDTVWQYLFQ*ESLWFLRFSYRHLE
Trigger: TTCCAGATGCCTATAAGAAAATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGTATCCCATTCTGATGTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS TCA 72 bp AAGGGCATCATATTTGTCATCCGGCTTTTGCTCAGATaGAATAGAGCTATTACTGAAAGCCATAAAATCTGC +
Preference number: 6 (lower is better)
Translates to: KGIIFVIRLLLR*NRAITESHKIC
Trigger: GCAGATTTTATGGCTTTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS GCA 72 bp TCCTCTTTAAGGGCATCATATTTGTCATCCGGCTTTTaGTCAGATGAAATAGAGCTATTACTGAAAGCCATA +
Preference number: 6 (lower is better)
Translates to: SSLRASYLSSGF*SDEIELLLKAI
Trigger: TATGGCTTTCAGTAATAGCTCTATTTCATCTGAGCAAAAGCCGGATGACAAATATGATGCCCTTAAAGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CCA 72 bp ACAGTTTGGCAGTATCTATTCCAGTTGGAGTCATTGTaGTTTCTAAGATTTTCTTATAGGCATCTGGAACCA +
Preference number: 6 (lower is better)
Translates to: TVWQYLFQLESL*FLRFSYRHLEP
Trigger: TGGTTCCAGATGCCTATAAGAAAATCTTAGAAACCACAATGACTCCAACTGGAATAGATACTGCCAAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000610513.2
ENST00000611910.4
ENST00000612223.5
ENST00000613407.4
ENST00000614000.4
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000619976.1
ENST00000621136.4
ENST00000622045.4
ENST00000631497.1
ENST00000632841.1
ENST00000633128.1
ENST00000633429.1
ENST00000633880.1
ENST00000633948.1
CDS CAA 72 bp TCTCACCCCTCTGAATCTGAAGGTCTTACAAACACTTaGACTTCACTTATCTTTAAACACATAACAGGATGC +
Preference number: 6 (lower is better)
Translates to: SHPSESEGLTNT*TSLIFKHITGC
Trigger: GCATCCTGTTATGTGTTTAAAGATAAGTGAAGTCAAAGTGTTTGTAAGACCTTCAGATTCAGAGGGGTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 90 bp GAAGAAACATCTCACCCCTCTGAATCTGAAGGTCTTACAAACACTTaGACTTCACTTATCTTTAAACACATAACAGGATGCAGAACAGTT +
Preference number: 6 (lower is better)
Translates to: EETSHPSESEGLTNT*TSLIFKHITGCRTV
Trigger: AACTGTTCTGCATCCTGTTATGTGTTTAAAGATAAGTGAAGTCAAAGTGTTTGTAAGACCTTCAGATTCAGAGGGGTGAGATGTTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619914.1
ENST00000631955.1
CDS CAA 90 bp AAGGTTGCCAGCTCACTTTTGATCATTTCTTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACTAAGAAGTCAAATTTGCTGATTTTG +
Preference number: 6 (lower is better)
Translates to: KVASSLLIISSLDFI*LCEVATKKSNLLIL
Trigger: CAAAATCAGCAAATTTGACTTCTTAGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGAAGAAATGATCAAAAGTGAGCTGGCAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp AGCTCACTTTTGATCATTTCTTCACTGGATTTCATTTaGCTTTGTGAAGTGGCTACTAAGAAGTCAAATTTG +
Preference number: 6 (lower is better)
Translates to: SSLLIISSLDFI*LCEVATKKSNL
Trigger: CAAATTTGACTTCTTAGTAGCCACTTCACAAAGCAAAATGAAATCCAGTGAAGAAATGATCAAAAGTGAGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000610513.2
ENST00000612223.5
ENST00000613407.4
ENST00000614196.1
ENST00000614941.4
ENST00000616179.4
ENST00000618176.4
ENST00000618402.4
ENST00000618829.4
ENST00000619541.4
ENST00000621136.4
ENST00000622045.4
ENST00000632841.1
ENST00000633429.1
ENST00000633948.1
CDS CAA 72 bp ACTGTATATTTGAGAACATCCAAATCTGTACTTAGCTaGAAGGAAGAGTTCTACATTGACTTTTCACACACA +
Preference number: 6 (lower is better)
Translates to: TVYLRTSKSVLS*KEEFYIDFSHT
Trigger: TGTGTGTGAAAAGTCAATGTAGAACTCTTCCTTCAAGCTAAGTACAGATTTGGATGTTCTCAAATATACAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612770.1
ENST00000633203.1