RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNPO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172403

Ensembl transcript IDs: ENST00000307142.9, ENST00000429713.7, ENST00000434046.6, ENST00000448416.6, ENST00000504178.1, ENST00000610556.4, ENST00000627783.2

Found 1536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGTGAGCTGCGCCCTCCTAGGTCAGCCCAACTGTTGCAGGTCTaGAGTGGGGTAGTCTCAGGGATAGGGTTGCCAACTGCTCCACTT +
Preference number: 1 (lower is better)
Translates to: SCELRPPRSAQLLQV*SGVVSGIGLPTAPL
Trigger: AAGTGGAGCAGTTGGCAACCCTATCCCTGAGACTACCCCACTTCAGACCTGCAACAGTTGGGCTGACCTAGGAGGGCGCAGCTCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp TGTCCTAGGACAGTGTGGAAAGGAGGGATAAGGACAGCTGTGAGCTaGGCCCTCCTAGGTCAGCCCAACTGTTGCAGGTCTGAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: CPRTVWKGGIRTAVS*ALLGQPNCCRSEVG
Trigger: CCCCACTTCAGACCTGCAACAGTTGGGCTGACCTAGGAGGGCGCAGCTCACAGCTGTCCTTATCCCTCCTTTCCACACTGTCCTAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp AACTCTCCCTTCTGTCACACTGACATCACTTCCTTGGCCCCAACCTaGAAGGTGGCACATATAGCCCCTGGTGGGCAGACAGGGAAAGCA +
Preference number: 1 (lower is better)
Translates to: NSPFCHTDITSLAPT*KVAHIAPGGQTGKA
Trigger: TGCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCCACCTTTCAGGTTGGGGCCAAGGAAGTGATGTCAGTGTGACAGAAGGGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp CATCACTTCCTTGGCCCCAACCTGAAAGGTGGCACATATAGCCCCTaGTGGGCAGACAGGGAAAGCAAATTCCTCTTACTCCAGGGAGCT +
Preference number: 1 (lower is better)
Translates to: HHFLGPNLKGGTYSP*WADRESKFLLLQGA
Trigger: AGCTCCCTGGAGTAAGAGGAATTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCCACCTTTCAGGTTGGGGCCAAGGAAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp TACTCTAAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTaGAAAGGAGGGATAAGGACAGCTGTGAGCTGCGCCCTCCTAGGT +
Preference number: 1 (lower is better)
Translates to: YSKKARLLTLCPRTV*KGGIRTAVSCALLG
Trigger: ACCTAGGAGGGCGCAGCTCACAGCTGTCCTTATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTTAGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp TGCTTCAGCGCCTGCCTGTTCCTTTTAGACGGGGCACTAAGACTGTaGAAGCAGGTGCAGTTTACAAGTCTGGCTGTCCCTGACTGGATA +
Preference number: 1 (lower is better)
Translates to: CFSACLFLLDGALRL*KQVQFTSLAVPDWI
Trigger: TATCCAGTCAGGGACAGCCAGACTTGTAAACTGCACCTGCTTCCACAGTCTTAGTGCCCCGTCTAAAAGGAACAGGCAGGCGCTGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp GGGACTGTATGGTCCAAGATGAGACCTATGCTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTACTGCATGCCTGACATGCCTCTTACA +
Preference number: 1 (lower is better)
Translates to: GTVWSKMRPMLPVPS*SCRCFYCMPDMPLT
Trigger: TGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTCTCATCTTGGACCATACAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp ATTAAGCAGTCTCAGGGAGTGAAATTCCGGGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTAGGGAGAGCACAGGTTTGGATGCCA +
Preference number: 1 (lower is better)
Translates to: IKQSQGVKFRGLMRL*KPCGTVGRAQVWMP
Trigger: TGGCATCCAAACCTGTGCTCTCCCTACAGTACCACATGGTTTCCACAGTCTCATCAGACCCCGGAATTTCACTCCCTGAGACTGCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp ACCTTCCTCCGAGCTGCTGAAACCACATTTGCCACAATGGATTCCTaGATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGA +
Preference number: 1 (lower is better)
Translates to: TFLRAAETTFATMDS*MFLGWKASSTRPRG
Trigger: TCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAGCTCGGAGGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR CCA 90 bp CTGGAAGCACCTTCCTCCGAGCTGCTGAAACCACATTTGCCACAATaGATTCCTGGATGTTTCTGGGTTGGAAAGCATCATCCACTAGAC +
Preference number: 1 (lower is better)
Translates to: LEAPSSELLKPHLPQ*IPGCFWVGKHHPLD
Trigger: GTCTAGTGGATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAGCTCGGAGGAAGGTGCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 90 bp CCCAATCTTACCAGTTCTGGGATTCACTCTGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTTACATGTCCATGGAACCTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PNLTSSGIHSALLED*GEYAVLTCPWNLPS
Trigger: GGAAGGAAGGTTCCATGGACATGTAAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGCAGAGTGAATCCCAGAACTGGTAAGATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp AAAGTGTCACAGGCATCTTTGTGTCCCCCAGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGGTCATGTTTCTGGGAATACAGTGTT +
Preference number: 1 (lower is better)
Translates to: KVSQASLCPPESNDM*TQDQRGSCFWEYSV
Trigger: AACACTGTATTCCCAGAAACATGACCCTCGCTGGTCTTGGGTCCACATATCATTGGACTCTGGGGGACACAAAGATGCCTGTGACACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp TCAGGGAGTGAAATTCCGGGGTCTGATGAGACTGTGGAAACCATGTaGTACTGTAGGGAGAGCACAGGTTTGGATGCCAGACAAATATCT +
Preference number: 1 (lower is better)
Translates to: SGSEIPGSDETVETM*YCRESTGLDARQIS
Trigger: AGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCTACAGTACCACATGGTTTCCACAGTCTCATCAGACCCCGGAATTTCACTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp GCTGAAACCACATTTGCCACAATGGATTCCTGGATGTTTCTGGGTTaGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: AETTFATMDSWMFLG*KASSTRPRGDFAAA
Trigger: AGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR CCA 90 bp GAGCTGCTGAAACCACATTTGCCACAATGGATTCCTGGATGTTTCTaGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTG +
Preference number: 1 (lower is better)
Translates to: ELLKPHLPQWIPGCF*VGKHHPLDREETLL
Trigger: CAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR CCA 90 bp GCGTCTCCATCCCCTTGGGTGTGGGTTGTAGTTGTAATCAGCTACTaGAAGACAGTAATCAGACCTGGTTTCCATGGACATGATTGCAGA +
Preference number: 1 (lower is better)
Translates to: ASPSPWVWVVVVISY*KTVIRPGFHGHDCR
Trigger: TCTGCAATCATGTCCATGGAAACCAGGTCTGATTACTGTCTTCCAGTAGCTGATTACAACTACAACCCACACCCAAGGGGATGGAGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 90 bp ACTCTGGTAATATGTGATGCTGGTTGGCTGGAAGCGGTAGGTGTTTaGGGCGTGTGGTCTAGTGCACTGTGGGAATTTGTTCAACAGAAA +
Preference number: 1 (lower is better)
Translates to: TLVICDAGWLEAVGV*GVWSSALWEFVQQK
Trigger: TTTCTGTTGAACAAATTCCCACAGTGCACTAGACCACACGCCTCAAACACCTACCGCTTCCAGCCAACCAGCATCACATATTACCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp GTTGCAGGTCTGAAGTGGGGTAGTCTCAGGGATAGGGTTGCCAACTaGTCCACTTTCAGTGTAATAGGCCTATTTAAGCTTCAACTATGC +
Preference number: 1 (lower is better)
Translates to: VAGLKWGSLRDRVAN*STFSVIGLFKLQLC
Trigger: GCATAGTTGAAGCTTAAATAGGCCTATTACACTGAAAGTGGAGCAGTTGGCAACCCTATCCCTGAGACTACCCCACTTCAGACCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp GGTGTCTGGATCCTGTGGGAATTTATTAGCCTGCTTTGTGGCCCTTaGCCAACCCTGGTAGGACATCTAGAGAAGAATTCAATTCTGCTT +
Preference number: 1 (lower is better)
Translates to: GVWILWEFISLLCGP*PTLVGHLEKNSILL
Trigger: AAGCAGAATTGAATTCTTCTCTAGATGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGGCTAATAAATTCCCACAGGATCCAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp AGAACTTCCACCCTCTTCTATAAAGTGGGACTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGCCCAGCTGAAGTTGTAGATGCTTTT +
Preference number: 1 (lower is better)
Translates to: RTSTLFYKVGLYGPR*DLCCQCPAEVVDAF
Trigger: AAAAGCATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTCTCATCTTGGACCATACAGTCCCACTTTATAGAAGAGGGTGGAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp CTATGCTGCCAGTGCCCAGCTGAAGTTGTAGATGCTTTTACTGCATaGCTGACATGCCTCTTACAAGGTTTTGGAGAACTCCAAATAGTC +
Preference number: 1 (lower is better)
Translates to: LCCQCPAEVVDAFTA*LTCLLQGFGELQIV
Trigger: GACTATTTGGAGTTCTCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp CTAAGATTAAAGTGGCAATGCTCAGATTCCCAATCTTACCAGTTCTaGGATTCACTCTGCCCTCCTAGAAGACTGAGGGGAATATGCTGT +
Preference number: 1 (lower is better)
Translates to: LRLKWQCSDSQSYQF*DSLCPPRRLRGICC
Trigger: ACAGCATATTCCCCTCAGTCTTCTAGGAGGGCAGAGTGAATCCCAGAACTGGTAAGATTGGGAATCTGAGCATTGCCACTTTAATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp TTCCTTTATTTGCCAGGTATAAATTACCATAACTCTGGTAATATGTaGTGCTGGTTGGCTGGAAGCGGTAGGTGTTTGAGGCGTGTGGTC +
Preference number: 1 (lower is better)
Translates to: FLYLPGINYHNSGNM*CWLAGSGRCLRRVV
Trigger: GACCACACGCCTCAAACACCTACCGCTTCCAGCCAACCAGCATCACATATTACCAGAGTTATGGTAATTTATACCTGGCAAATAAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp TACATGTCCATGGAACCTTCCTTCCTCCTAGAATCCCAAGCGTTATaGAGATTCATTATAGCACAACATTCCCGTCAGGAAGAGAGGTTT +
Preference number: 1 (lower is better)
Translates to: YMSMEPSFLLESQAL*RFIIAQHSRQEERF
Trigger: AAACCTCTCTTCCTGACGGGAATGTTGTGCTATAATGAATCTGCATAACGCTTGGGATTCTAGGAGGAAGGAAGGTTCCATGGACATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp ACTGTGAACCATATTGGGAGGTGGTGGACATATTATTATTGGCTGTaGCATTATACTCTTGCCTTCCACATGAGCCCATATAGGCCTTCT +
Preference number: 1 (lower is better)
Translates to: TVNHIGRWWTYYYWL*HYTLAFHMSPYRPS
Trigger: AGAAGGCCTATATGGGCTCATGTGGAAGGCAAGAGTATAATGTCACAGCCAATAATAATATGTCCACCACCTCCCAATATGGTTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR GCA 90 bp AGCTTCTTAGAATTGTTTTTCATCACTTGCCCTGAGCTGGGAGTTTaGTCTGTTCAGGCCGAGGTTTCACTCTTTCTGTTTTTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: SFLELFFITCPELGV*SVQAEVSLFLFLES
Trigger: ACTTTCCAAAAACAGAAAGAGTGAAACCTCGGCCTGAACAGAGCAAACTCCCAGCTCAGGGCAAGTGATGAAAAACAATTCTAAGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp TGTAGATGCTTTTACTGCATGCCTGACATGCCTCTTACAAGGTTTTaGAGAACTCCAAATAGTCCTAGGATGACCAGAAGGCATAGTCAT +
Preference number: 1 (lower is better)
Translates to: CRCFYCMPDMPLTRF*RTPNSPRMTRRHSH
Trigger: ATGACTATGCCTTCTGGTCATCCTAGGACTATTTGGAGTTCTCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp ATCATACCTAGCTCACAAGGACTGCTGATTAAAAGCAGTAATCTGTaGAAGATACTCAGCACAAATCAGGGCCCAAATTTTGTGCTCAGC +
Preference number: 1 (lower is better)
Translates to: IIPSSQGLLIKSSNL*KILSTNQGPNFVLS
Trigger: GCTGAGCACAAAATTTGGGCCCTGATTTGTGCTGAGTATCTTTCACAGATTACTGCTTTTAATCAGCAGTCCTTGTGAGCTAGGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp GGACATATTATTATTGGCTGTGACATTATACTCTTGCCTTCCACATaGGCCCATATAGGCCTTCTGGGTTTGAGGAATATAGGACAGTCT +
Preference number: 1 (lower is better)
Translates to: GHIIIGCDIILLPST*AHIGLLGLRNIGQS
Trigger: AGACTGTCCTATATTCCTCAAACCCAGAAGGCCTATATGGGCTCATGTGGAAGGCAAGAGTATAATGTCACAGCCAATAATAATATGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 90 bp TTCACCATAGGAGGACAGCTGTTATGTTACATAAAGGCTGATTCCTaGTGTTTGATATCACTGATCACTGTCTTTCTTGTGGCTACAGCA +
Preference number: 1 (lower is better)
Translates to: FTIGGQLLCYIKADS*CLISLITVFLVATA
Trigger: TGCTGTAGCCACAAGAAAGACAGTGATCAGTGATATCAAACATCAGGAATCAGCCTTTATGTAACATAACAGCTGTCCTCCTATGGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp TACATGTTACTTCGTTATCCTGTATACTCTACCACTTGCCTCAGCTaGGGAAAACAAACTTATGCTTTCATGGGCAACTGGAGATGTACT +
Preference number: 1 (lower is better)
Translates to: YMLLRYPVYSTTCLS*GKQTYAFMGNWRCT
Trigger: AGTACATCTCCAGTTGCCCATGAAAGCATAAGTTTGTTTTCCTCAGCTGAGGCAAGTGGTAGAGTATACAGGATAACGAAGTAACATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp TTCATTATAGCACAACATTCCCGTCAGGAAGAGAGGTTTGACACATaGTTAAGGGGAAACTTGTGGAAAGAGAAATGTTTAAGGTCCTGC +
Preference number: 1 (lower is better)
Translates to: FIIAQHSRQEERFDT*LRGNLWKEKCLRSC
Trigger: GCAGGACCTTAAACATTTCTCTTTCCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGACGGGAATGTTGTGCTATAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp CATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTaGGTCCTGCCTTTTACATGTTACTTCGTTATCCTGTATACTCTA +
Preference number: 1 (lower is better)
Translates to: HVVSPGETIAMYTFM*VLPFTCYFVILYTL
Trigger: TAGAGTATACAGGATAACGAAGTAACATGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 90 bp TGTTATTCAAAGTGTAGTTCACAGCCCATTAGCATCAGAATCACCTaGGTTGTATGTTACAAAAACAAATTCCTAGGTCCCACCCAAACC +
Preference number: 1 (lower is better)
Translates to: CYSKCSSQPISIRIT*VVCYKNKFLGPTQT
Trigger: GGTTTGGGTGGGACCTAGGAATTTGTTTTTGTAACATACAACCCAGGTGATTCTGATGCTAATGGGCTGTGAACTACACTTTGAATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp ACATCTAGAGAAGAATTCAATTCTGCTTTTTCCCAGAATAATTGTTaGCTAACTCGGCAACACCAAAGTGTCACAGGCATCTTTGTGTCC +
Preference number: 1 (lower is better)
Translates to: TSREEFNSAFSQNNC*LTRQHQSVTGIFVS
Trigger: GGACACAAAGATGCCTGTGACACTTTGGTGTTGCCGAGTTAGTCAACAATTATTCTGGGAAAAAGCAGAATTGAATTCTTCTCTAGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp AATCAGCTACTGGAAGACAGTAATCAGACCTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTGAAGCCTGCCTATAATATGCATATG +
Preference number: 1 (lower is better)
Translates to: NQLLEDSNQTWFPWT*LQNHFLKPAYNMHM
Trigger: CATATGCATATTATAGGCAGGCTTCAAGAAATGATTCTGCAATCATGTCCATGGAAACCAGGTCTGATTACTGTCTTCCAGTAGCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 90 bp ATGCAGATTCATTATAGCACAACATTCCCGTCAGGAAGAGAGGTTTaGCACATGATTAAGGGGAAACTTGTGGAAAGAGAAATGTTTAAG +
Preference number: 1 (lower is better)
Translates to: MQIHYSTTFPSGREV*HMIKGKLVEREMFK
Trigger: CTTAAACATTTCTCTTTCCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGACGGGAATGTTGTGCTATAATGAATCTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp ACTAAGACTGTGGAAGCAGGTGCAGTTTACAAGTCTGGCTGTCCCTaGCTGGATAAACAGGAAAACTATTTATGGGTTTTAAAGAATAAA +
Preference number: 1 (lower is better)
Translates to: TKTVEAGAVYKSGCP*LDKQENYLWVLKNK
Trigger: TTTATTCTTTAAAACCCATAAATAGTTTTCCTGTTTATCCAGTCAGGGACAGCCAGACTTGTAAACTGCACCTGCTTCCACAGTCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp GTGACAACCCAAATGTGTCTTACAAAACACGTTCCTAACAAGGTATaGTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTA +
Preference number: 1 (lower is better)
Translates to: VTTQMCLTKHVPNKV*FTLPMQKLCLFSSL
Trigger: TAGAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAGGAACGTGTTTTGTAAGACACATTTGGGTTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 90 bp TTTCTCTTTATTCAATTGCCTCTGAGTAGTGCTGTGATTTCCAAGTaGCAGGTAGTTAGGTGTACAAATATACATACCACAGAAACATAC +
Preference number: 1 (lower is better)
Translates to: FLFIQLPLSSAVISK*QVVRCTNIHTTETY
Trigger: GTATGTTTCTGTGGTATGTATATTTGTACACCTAACTACCTGGCACTTGGAAATCACAGCACTACTCAGAGGCAATTGAATAAAGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 90 bp TTCATTTTCAAGTATGCTGGAGAATACCCACAGTACACTTTAGGATaGTTTAACAATGGCACTTTGATTTTCAGGTTCATATCTGCAAAG +
Preference number: 1 (lower is better)
Translates to: FIFKYAGEYPQYTLG*FNNGTLIFRFISAK
Trigger: CTTTGCAGATATGAACCTGAAAATCAAAGTGCCATTGTTAAATCATCCTAAAGTGTACTGTGGGTATTCTCCAGCATACTTGAAAATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACTGCTTTGTGGCCCTTaGCCAACCCTGGTAGGACAT +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLLCGP*PTLVGH
Trigger: ATGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCCCCCAGAGTCCAATaGTATGTGGACCCAAGACCA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSPRVQ*YVDPRP
Trigger: TGGTCTTGGGTCCACATATCATTGGACTCTGGGGGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATTCAAATGCCCTGCCTaGTGGGCCAGTTGTGACTCA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLFKCPA*WASCDS
Trigger: TGAGTCACAACTGGCCCAGCAGGCAGGGCATTTGAA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCTCATGCACTTGACTaGTGTCCTGACTGGGATTGG +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPHALD*CPDWDW
Trigger: CCAATCCCAGTCAGGACAGCAGTCAAGTGCATGAGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLPVPS*SCRCFY
Trigger: GTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTT +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLALLED*GEYAVL
Trigger: AAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATTCTGGGATTCACTCTaGCCTCCTAGAAGACTGAGG +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLFWDSL*PPRRLR
Trigger: CCTCAGTCTTCTAGGAGGGCAGAGTGAATCCCAGAA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGAGGAATCTTTGAGGTaGGAAGGGTTTGCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLEESLR*EGFAAS
Trigger: TGAGGCAGCAAACCCTTCCCACCTCAAAGATTCCTC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACAAGGTAACCTTGCCTaGATTATCCTGGTCCATCGA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLQGNLA*IILVHR
Trigger: TCGATGGACCAGGATAATTCAGGCAAGGTTACCTTG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACTTTTACCTGTGACCTaGGTCTTCTTGCAATCAGGG +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLLPVT*VFLQSG
Trigger: CCCTGATTGCAAGAAGACTCAGGTCACAGGTAAAAG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATATGTGATGCTGGTTaGCTGGAAGCGGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLICDAG*LEAVGV
Trigger: AACACCTACCGCTTCCAGCCAACCAGCATCACATAT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAATGATTGTCGCTCTTaGGCTGGCAATGAAAACCGA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLNDCRS*AGNENR
Trigger: TCGGTTTTCATTGCCAGCTCAAGAGCGACAATCATT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGLMRL*KPCGTV
Trigger: TACAGTACCACATGGTTTCCACAGTCTCATCAGACC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGCACATATAGCCCCTaGTGGGCAGACAGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGTYSP*WADRES
Trigger: GCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTCCTTGGCCCCAACCTaGAAGGTGGCACATATAGCC +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSLAPT*KVAHIA
Trigger: GGCTATATGTGCCACCTTTCAGGTTGGGGCCAAGGA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATTGAACCAAAATGCTTaGTTTTGGGTTGTTGCATGG +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLNQNA*FWVVAW
Trigger: CCATGCAACAACCCAAAATCAAGCATTTTGGTTCAA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATACTTAGCCTCTTTGTaGCTCAGAATCTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLYLASL*LRISSV
Trigger: TACAGATGAGATTCTGAGGCACAAAGAGGCTAAGTA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCATCTCCCTCAGAGTaGGGTCAGACTTTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPSPSE*GQTLLW
Trigger: CCACAACAAAGTCTGACCTCACTCTGAGGGAGATGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCACTGAGGAATCTTTaGGGTGGGAAGGGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPLRNL*GGKGLL
Trigger: CAGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACTGCATTATTGTTACTaGAATTTGAGGGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLHYCY*NLRVSL
Trigger: GAGAGAAACCCTCAAATTTCAGTAACAATAATGCAG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACAGTCTCCACACACATaGGGTTCCTCGTGCTTCACA +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTQSPHT*GSSCFT
Trigger: TGTGAAGCACGAGGAACCCCATGTGTGTGGAGACTG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTGACATCACTTCCTTaGCCCCAACCTGAAAGGTGG +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLTSLP*PQPERW
Trigger: CCACCTTTCAGGTTGGGGCCAAGGAAGTGATGTCAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLPVPS*SCRCFY
Trigger: GTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCAGGAGGCGCAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPGGAG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTGCGCCTCCTGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTTAAGAATTCAGGCTaGAGACTGAATCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVKNSG*RLNPGA
Trigger: GGCCCCTGGATTCAGTCTGCAGCCTGAATTCTTAAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGCAGGAGAATTGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGRRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCAATTCTCCTGCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTGACAGACCAGAGCTaGTCCCTGTCCTTCATAGAT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLTDQS*SLSFID
Trigger: ATCTATGAAGGACAGGGAGCAGCTCTGGTCTGTCAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGACTGCTGTCCTGACTaGGATTGGCACCGTGACACT +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIDCCPD*DWHRDT
Trigger: AGTGTCACGGTGCCAATCCCAGTCAGGACAGCAGTC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTATATGTGATGCTGGTTaGCTGGAAGCGGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSICDAG*LEAVGV
Trigger: AACACCTACCGCTTCCAGCCAACCAGCATCACATAT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTATCCTCTGGAGGCCCTaGAAGCACCTTCCTCCGAGC +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCILWRP*KHLPPS
Trigger: GCTCGGAGGAAGGTGCTTCCAGGGCCTCCAGAGGAT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTACTGCATGCCTGACATaGCTCTTACAAGGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSTACLT*LLQGFG
Trigger: TCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCAGGTCCCAATCATGTaGTTTCTCCAGGTGAAACAA +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSQVPIM*FLQVKQ
Trigger: TTGTTTCACCTGGAGAAACCACATGATTGGGACCTG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIESNDM*TQDQRG
Trigger: CCCTCGCTGGTCTTGGGTCCACATATCATTGGACTC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 90 bp TCATGCCTCTCAGGCAAGGGGATCAATTACTCTAAAAAGGCCAGGTaGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAGG +
Preference number: 2 (lower is better)
Translates to: SCLSGKGINYSKKAR*LTLCPRTVWKGGIR
Trigger: CCTTATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTTAGAGTAATTGATCCCCTTGCCTGAGAGGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTCTTGAGCTGGCAATaGAAACCGACTTCGTGGATG +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLLSWQ*KPTSWM
Trigger: CATCCACGAAGTCGGTTTTCATTGCCAGCTCAAGAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTCTTAGCAGCCGAATaGCCTTCAAAGTTCTTTAAC +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLLAAE*PSKFFN
Trigger: GTTAAAGAACTTTGAAGGTCATTCGGCTGCTAAGAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGCTCACAAGGACTGCTaGTTAAAAGCAGTAATCTGT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSAHKDC*LKAVIC
Trigger: ACAGATTACTGCTTTTAATCAGCAGTCCTTGTGAGC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCTTTATGTGCGTCCTaGCTTTTACATGTTACTTCG +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPLCAS*LLHVTS
Trigger: CGAAGTAACATGTAAAAGGCAGGACGCACATAAAGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGACCTATGCTGCCAGTaGCCAGCTGAAGTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIDLCCQ*PAEVVD
Trigger: ATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCATTGCACTCCAGACTaGGTGGGACAGAGCAAGACT +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHCTPD*VGQSKT
Trigger: AGTCTTGCTCTGTCCCACCCAGTCTGGAGTGCAATG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATCATTTCAAGCAAAGTaGACACTCAGCTTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTSFQAK*TLSFSY
Trigger: GTAGCTGAAGCTGAGTGTCCACTTTGCTTGAAATGA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGCTTTCATGGGCAACTaGAGATGTACTCACTTAGTT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSAFMGN*RCTHLV
Trigger: AACTAAGTGAGTACATCTCCAGTTGCCCATGAAAGC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCCTCTTCTATAAAGTaGGACTGTATGGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPSSIK*DCMVQD
Trigger: ATCTTGGACCATACAGTCCCACTTTATAGAAGAGGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCCATCTCCCTCAGAGTaGGGTCAGACTTTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVPSPSE*GQTLLW
Trigger: CCACAACAAAGTCTGACCTCACTCTGAGGGAGATGG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTTTTACCTGTGACCTaGGTCTTCTTGCAATCAGGG +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILLPVT*VFLQSG
Trigger: CCCTGATTGCAAGAAGACTCAGGTCACAGGTAAAAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTACTTAGCCTCTTTGTaGCTCAGAATCTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSYLASL*LRISSV
Trigger: TACAGATGAGATTCTGAGGCACAAAGAGGCTAAGTA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTCGAATATTTTCCATaGTTGGTCAGACTCAGACTT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVEYFP*LVRLRL
Trigger: AAGTCTGAGTCTGACCAACCATGGAAAATATTCGAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAACTGGAAATACTTCTaGGTCATTACCATCCTAGGA +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTNWKYF*VITILG
Trigger: TCCTAGGATGGTAATGACCCAGAAGTATTTCCAGTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTACACCACTAGACAACTaGAAATACTTCTGGGTCATT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSTPLDN*KYFWVI
Trigger: AATGACCCAGAAGTATTTCCAGTTGTCTAGTGGTGT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCTCTTACAAGGTTTTaGAGAACTCCAAATAGTCCT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPLTRF*RTPNSP
Trigger: AGGACTATTTGGAGTTCTCCAAAACCTTGTAAGAGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTT +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVALLED*GEYAVL
Trigger: AAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCACTCATGTCATCCTaGCTTGAACCAAAATGCTTG +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPLMSS*LEPKCL
Trigger: CAAGCATTTTGGTTCAAGTCAGGATGACATGAGTGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATGCGTCATAGCATCTaGTTTTCTGAGCCATCTTGG +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIMRHSI*FSEPSW
Trigger: CCAAGATGGCTCAGAAAATCAGATGCTATGACGCAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTGCATATGGCAACTGTaGACCATATTGGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVCIWQL*TILGGG
Trigger: ACCACCTCCCAATATGGTTCACAGTTGCCATATGCA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCAGGAGGCGCAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPGGAG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTGCGCCTCCTGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTGTCCAACAGGAAATaGAAAGAAAACACTTCTCAT +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLSNRK*KENTSH
Trigger: ATGAGAAGTGTTTTCTTTCCATTTCCTGTTGGACAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGTCAGACTTTGTTGTaGATATTGTTTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGQTLL*ILFWRT
Trigger: AGTTCTCCAAAACAATATCCACAACAAAGTCTGACC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTACATATAGCCCCTGGTaGGCAGACAGGGAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVTYSPW*ADRESK
Trigger: TTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTA +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIGLMRL*KPCGTV
Trigger: TACAGTACCACATGGTTTCCACAGTCTCATCAGACC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCATCCCCTTGGGTGTaGGTTGTAGTTGTAATCAGC +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPSPWV*VVVVIS
Trigger: GCTGATTACAACTACAACCCACACCCAAGGGGATGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCTAACTTTCATGTTTaGCGTCTCCATCCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSNFHV*RLHPLG
Trigger: CCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGGCGCAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRRRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTGCGCCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATACCTTCACTACATTTaGACCTTTCACCATAGGAGG +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIYLHYI*TFHHRR
Trigger: CCTCCTATGGTGAAAGGTTCAAATGTAGTGAAGGTA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCCAGGCAAGTTTTTCTaGGAGGTCTCTAAACATATC +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTPGKFF*EVSKHI
Trigger: GATATGTTTAGAGACCTCTCAGAAAAACTTGCCTGG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGGAAGTAGGTCCTTATaGTATCTTGACTATGGATCC +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIGSRSL*YLDYGS
Trigger: GGATCCATAGTCAAGATATCATAAGGACCTACTTCC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCCTTTATGTGCGTCCTaGCTTTTACATGTTACTTCG +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTPLCAS*LLHVTS
Trigger: CGAAGTAACATGTAAAAGGCAGGACGCACATAAAGG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATGCTAATAATTGTGTaGTCTCACCCTACAGTCTCC +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIMLIIV*SHPTVS
Trigger: GGAGACTGTAGGGTGAGAGCACACAATTATTAGCAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAGACTGAGGGGAATATaGTGTACTTACATGTCCATG +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTRLRGI*CTYMSM
Trigger: CATGGACATGTAAGTACAGCATATTCCCCTCAGTCT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGTCCTACAATGCCTaGTTCTTGAAAGAAGTCGGC +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVLSYNA*FLKEVG
Trigger: GCCGACTTCTTTCAAGAAGCAGGCATTGTAGGACAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCATTTCAAGCAAAGTaGACACTCAGCTTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSFQAK*TLSFSY
Trigger: GTAGCTGAAGCTGAGTGTCCACTTTGCTTGAAATGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTCAGAAGATTAAAATaGTACTGTGTACCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTFRRLK*YCVPSN
Trigger: GTTTGAGGGTACACAGTACCATTTTAATCTTCTGAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTCAGAAGATTAAAATaGTACTGTGTACCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSFRRLK*YCVPSN
Trigger: GTTTGAGGGTACACAGTACCATTTTAATCTTCTGAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTATTCTAAGATTAAAGTaGCAATGCTCAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSILRLK*QCSDSQ
Trigger: TTGGGAATCTGAGCATTGCCACTTTAATCTTAGAAT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCATTGTTCTGCAGCTaGCTTAATTCTCCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPLFCS*LNSPLY
Trigger: ATAAAGAGGAGAATTAAGTCAGCTGCAGAACAATGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATGACGCTCATAGGATaGCCTGTCATTTTTGTACTA +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIMTLIG*PVIFVL
Trigger: TAGTACAAAAATGACAGGTCATCCTATGAGCGTCAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTACATGGGGTTCCTCGTaGTTCACAATCAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: RLKWYCVPSNQASFSERSTWGSS*FTISPC
Trigger: ACAGGGGCTGATTGTGAAGCACGAGGAACCCCATGT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGTACAAAGTTTGACATaGTCTAGAGTGACAACCCAA +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIVQSLT*SRVTTQ
Trigger: TTGGGTTGTCACTCTAGAGCATGTCAAACTTTGTAC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGACCATGACTTCAAATaGCCTGCCTGCTGGGCCAGT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVDHDFK*PACWAS
Trigger: ACTGGCCCAGCAGGCAGGGCATTTGAAGTCATGGTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGTGACATTATACTCTTaGCTTCCACATGAGCCCATA +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVVTLYS*LPHEPI
Trigger: TATGGGCTCATGTGGAAGGCAAGAGTATAATGTCAC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCAGTCTCCACACACATaGGGTTCCTCGTGCTTCACA +
Preference number: 2 (lower is better)
Translates to: RLKWYCVPSNQASFSERSQSPHT*GSSCFT
Trigger: TGTGAAGCACGAGGAACCCCATGTGTGTGGAGACTG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAGGGAGGCTGACGTCTaGAGGTCTAACTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLREADV*RSNSPF
Trigger: GAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATGGTCTAGTGCACTGTaGGAATTTGTTCAACAGAAA +
Preference number: 2 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIWSSAL*EFVQQK
Trigger: TTTCTGTTGAACAAATTCCCACAGTGCACTAGACCA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTGGATGTTTCTGGGTTaGAAAGCATCATCCACTAGA +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVWMFLG*KASSTR
Trigger: TCTAGTGGATGATGCTTTCCAACCCAGAAACATCCA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCATTCCTGGATGTTTCTaGGTTGGAAAGCATCATCCA +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVIPGCF*VGKHHP
Trigger: TGGATGATGCTTTCCAACCCAGAAACATCCAGGAAT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR CAA 90 bp GGTAGAGGAAGAAAGGTAGGCTGGGAAGTAGGTCCTTATGATATCTaGACTATGGATCCCAGATTTACATTTCACCTGTCACAGAGCACA +
Preference number: 2 (lower is better)
Translates to: GRGRKVGWEVGPYDI*TMDPRFTFHLSQST
Trigger: TGTGCTCTGTGACAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTCCCAGCCTACCTTTCTTCCTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 90 bp GGAATATTAAGTTCCTCCCTATGTCAGTGGCTCAGCTTCTTAGAATaGTTTTTCATCACTTGCCCTGAGCTGGGAGTTTGCTCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: GILSSSLCQWLSFLE*FFITCPELGVCSVQ
Trigger: CTGAACAGAGCAAACTCCCAGCTCAGGGCAAGTGATGAAAAACAATTCTAAGAAGCTGAGCCACTGACATAGGGAGGAACTTAATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACTGGCATGCCCCTATaGGAAATTTCTGCAATGTTA +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTGMPL*EISAML
Trigger: TAACATTGCAGAAATTTCTCATAGGGGCATGCCAGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGGCGCAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRRRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTGCGCCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACATGGGGTTCCTCGTaGTTCACAATCAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTWGSS*FTISPC
Trigger: ACAGGGGCTGATTGTGAAGCACGAGGAACCCCATGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGATGCTTTTACTGCATaGCTGACATGCCTCTTACAA +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVDAFTA*LTCLLQ
Trigger: TTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAGATTAAAGTGGCAATaGTCAGATTCCCAATCTTAC +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTRLKWQ*SDSQSY
Trigger: GTAAGATTGGGAATCTGAGCATTGCCACTTTAATCT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGTGGGAAGGGTTTGCTaGCTCATGCACTTGACTGCT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVVGRVC*LMHLTA
Trigger: AGCAGTCAAGTGCATGAGGCAGCAAACCCTTCCCAC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGAGAGGAGACTTTGCTaGTGCTTCCCAAGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNERRLC*CFPRSW
Trigger: CCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACACCGAGAGGAGACTTTaGTGCTGCTTCCCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNTERRL*CCFPRS
Trigger: ACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCAAGTAATGCTCTATaGATCAGCCAACAAGGAAGT +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPSNAL*ISQQGS
Trigger: ACTTCCTTGTTGGCTGATCCATAGAGCATTACTTGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAAAGTAATTGCTCACTaGCATGCCCCTATGAGAAAT +
Preference number: 2 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVKVIAH*HAPMRN
Trigger: ATTTCTCATAGGGGCATGCCAGTGAGCAATTACTTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGTGATATCAAACAGGTaGCTGAGATTGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFVISNR*LRLTDQ
Trigger: CTGGTCTGTCAATCTCAGCCACCTGTTTGATATCAC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCCCTCTTCTATAAAGTaGGACTGTATGGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVPSSIK*DCMVQD
Trigger: ATCTTGGACCATACAGTCCCACTTTATAGAAGAGGG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTTACTCCAGGGAGCTaGTTAGTCCTTCTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLTPGS*LVLLPP
Trigger: GGGAGGAAGAAGGACTAACCAGCTCCCTGGAGTAAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTACCATGCAGTGGATTTaGGATAATATACATAAGGCA +
Preference number: 2 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTTMQWI*DNIHKA
Trigger: TGCCTTATGTATATTATCCCAAATCCACTGCATGGT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLESNDM*TQDQRG
Trigger: CCCTCGCTGGTCTTGGGTCCACATATCATTGGACTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTCACTTGCCCTGAGCTaGGAGTTTGCTCTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVSLALS*EFALFR
Trigger: CCTGAACAGAGCAAACTCCCAGCTCAGGGCAAGTGA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLYGPR*DLCCQC
Trigger: GCACTGGCAGCATAGGTCTCATCTTGGACCATACAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGATTCAGGCTGCAGACTaGATCCAGGGGCCATTACTT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVIQAAD*IQGPLL
Trigger: AAGTAATGGCCCCTGGATTCAGTCTGCAGCCTGAAT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTG +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCWFPWT*LQNHFL
Trigger: CAAGAAATGATTCTGCAATCATGTCCATGGAAACCA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGACCTATGCTGCCAGTaGCCAGCTGAAGTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVDLCCQ*PAEVVD
Trigger: ATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGTTCCTAACAAGGTATaGTTTACACTACCAATGCAG +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVVPNKV*FTLPMQ
Trigger: CTGCATTGGTAGTGTAAAGCATACCTTGTTAGGAAC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTAAAGTAATTGCTCACTaGCATGCCCCTATGAGAAAT +
Preference number: 2 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCKVIAH*HAPMRN
Trigger: ATTTCTCATAGGGGCATGCCAGTGAGCAATTACTTT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTTGTGGATATTGTTTTaGAGAACTTCCACCCTCTTC +
Preference number: 2 (lower is better)
Translates to: HVSSALRRVYCERATQSVLWILF*RTSTLF
Trigger: GAAGAGGGTGGAAGTTCTCCAAAACAATATCCACAA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACATATAGCCCCTGGTaGGCAGACAGGGAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTYSPW*ADRESK
Trigger: TTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGACATCACTTCCTTaGCCCCAACCTGAAAGGTGG +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLTSLP*PQPERW
Trigger: CCACCTTTCAGGTTGGGGCCAAGGAAGTGATGTCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTCATTCCAATCCTCTaGAGGCCCTGGAAGCACCTT +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVFIPIL*RPWKHL
Trigger: AAGGTGCTTCCAGGGCCTCCAGAGGATTGGAATGAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTCCAATCTTCTCATTTaGCAGATGGGGACCCCTGAA +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVSNLLI*QMGTPE
Trigger: TTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCCAATCTTCTCATTTaGCAGATGGGGACCCCTGAA +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSNLLI*QMGTPE
Trigger: TTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCAAGGTAACCTTGCCTaGATTATCCTGGTCCATCGA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVQGNLA*IILVHR
Trigger: TCGATGGACCAGGATAATTCAGGCAAGGTTACCTTG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLYGPR*DLCCQC
Trigger: GCACTGGCAGCATAGGTCTCATCTTGGACCATACAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTCTTGAGCTGGCAATaGAAACCGACTTCGTGGATG +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLLSWQ*KPTSWM
Trigger: CATCCACGAAGTCGGTTTTCATTGCCAGCTCAAGAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCCACTGAGGAATCTTTaGGGTGGGAAGGGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSPLRNL*GGKGLL
Trigger: CAGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGACAGACCAGAGCTaGTCCCTGTCCTTCATAGAT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLTDQS*SLSFID
Trigger: ATCTATGAAGGACAGGGAGCAGCTCTGGTCTGTCAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAATTCACCCTTAGAATaGGGGTGCTTGCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSNSPLE*GCLQEP
Trigger: GGGCTCCTGCAAGCACCCCCATTCTAAGGGTGAATT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 90 bp ATTGAATGTGGTCAAAGCTATCTACAAAGCAGAGACAGTAGGCTCTaGGTGAATCAGTTTGGGAAATTCACAATTAAGCAGTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: IECGQSYLQSRDSRL*VNQFGKFTIKQSQG
Trigger: TCCCTGAGACTGCTTAATTGTGAATTTCCCAAACTGATTCACCAAGAGCCTACTGTCTCTGCTTTGTAGATAGCTTTGACCACATTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTACCTTCACTACATTTaGACCTTTCACCATAGGAGG +
Preference number: 2 (lower is better)
Translates to: RLKWYCVPSNQASFSERSYLHYI*TFHHRR
Trigger: CCTCCTATGGTGAAAGGTTCAAATGTAGTGAAGGTA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAATGATTGTCGCTCTTaGGCTGGCAATGAAAACCGA +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLNDCRS*AGNENR
Trigger: TCGGTTTTCATTGCCAGCTCAAGAGCGACAATCATT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGGAATTTATTAGCCTaGTTTGTGGCCCTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGNLLA*FVALGQ
Trigger: TTGGCCAAGGGCCACAAAGCAGGCTAATAAATTCCC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGGAGACTTTGCTGCTaGTTCCCAAGGAGTTGGTCT +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRRLCC*FPRSWS
Trigger: AGACCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGTGATATCAAACAGGTaGCTGAGATTGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVVISNR*LRLTDQ
Trigger: CTGGTCTGTCAATCTCAGCCACCTGTTTGATATCAC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCGAGGGTCATGTTTCTaGGAATACAGTGTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLRGSCF*EYSVGS
Trigger: AGAACCAACACTGTATTCCCAGAAACATGACCCTCG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGTGTCTGGATCCTGTaGGAATTTATTAGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGVWIL*EFISLL
Trigger: AAGCAGGCTAATAAATTCCCACAGGATCCAGACACC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGAAGATGGGGTTTCATTaGCATGACGCTCATAGGATG +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLKMGFH*HDAHRM
Trigger: CATCCTATGAGCGTCATGCCAATGAAACCCCATCTT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGAGAGGTTTGACACATaGTTAAGGGGAAACTTGTGG +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKERFDT*LRGNLW
Trigger: CCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTCAGGAAGAGAGGTTTaGCACATGATTAAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVSGREV*HMIKGK
Trigger: TTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGTATCAAAGATTCTCTaGCTTCTACCGTGTATCCTG +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVVSKIL*LLPCIL
Trigger: CAGGATACACGGTAGAAGTCAGAGAATCTTTGATAC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGACCCATGAGATTATTTaGATGACTGCCACAGCTTCT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVTHEII*MTATAS
Trigger: AGAAGCTGTGGCAGTCATTCAAATAATCTCATGGGT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAACCAGCAAAATGTTaGGCTTCCCTTCGCCATTAT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKPAKC*ASLRHY
Trigger: ATAATGGCGAAGGGAAGCTCAACATTTTGCTGGTTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAACTCTGGTAATATGTaGTGCTGGTTGGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSNSGNM*CWLAGS
Trigger: GCTTCCAGCCAACCAGCATCACATATTACCAGAGTT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAATTGCTCACTGGCATaGCCCTATGAGAAATTTCTG +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNNCSLA*PYEKFL
Trigger: CAGAAATTTCTCATAGGGGCATGCCAGTGAGCAATT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAATTGCTCACTGGCATaGCCCTATGAGAAATTTCTG +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVNCSLA*PYEKFL
Trigger: CAGAAATTTCTCATAGGGGCATGCCAGTGAGCAATT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGATGCTTTTACTGCATaGCTGACATGCCTCTTACAA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVDAFTA*LTCLLQ
Trigger: TTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACTTCGTGGATGCTCTaGCTAGAAATTATGCTAAGG +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTSWML*LEIMLR
Trigger: CCTTAGCATAATTTCTAGGCAGAGCATCCACGAAGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGAGACTGAGGGGAATATaGTGTACTTACATGTCCATG +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLRLRGI*CTYMSM
Trigger: CATGGACATGTAAGTACAGCATATTCCCCTCAGTCT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGTCACCAAGTGGGTCTaGCTGTTTCTTTGTTCCGTA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSVTKWV*LFLCSV
Trigger: TACGGAACAAAGAAACAGGCAGACCCACTTGGTGAC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGTAGAACGTGGCCCTaGCAAGCCAAGTATTTTCTG +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSRTWP*QAKYFL
Trigger: CAGAAAATACTTGGCTTGCCAGGGCCACGTTCTACT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGCTTTCATGGGCAACTaGAGATGTACTCACTTAGTT +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLAFMGN*RCTHLV
Trigger: AACTAAGTGAGTACATCTCCAGTTGCCCATGAAAGC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 90 bp CTGCCAGATAGATTTAAGCTAGTTATTAGTAAGAATATTTTGGATTaGGAGATAACAGAGTCTAGGGCCCAACAGCCAAGGGAAGTCATA +
Preference number: 2 (lower is better)
Translates to: LPDRFKLVISKNILD*EITESRAQQPREVI
Trigger: TATGACTTCCCTTGGCTGTTGGGCCCTAGACTCTGTTATCTCCAAATCCAAAATATTCTTACTAATAACTAGCTTAAATCTATCTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCGGGCATTCTACAAATaGGAGAATCTCAGAATATCA +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVRAFYK*ENLRIS
Trigger: TGATATTCTGAGATTCTCTCATTTGTAGAATGCCCG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTATAAAGGCTGATTCCTaGTGTTTGATATCACTGATC +
Preference number: 2 (lower is better)
Translates to: RLKWYCVPSNQASFSERSIKADS*CLISLI
Trigger: GATCAGTGATATCAAACATCAGGAATCAGCCTTTAT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACCAGGCAAGTTTTTCTaGGAGGTCTCTAAACATATC +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKPGKFF*EVSKHI
Trigger: GATATGTTTAGAGACCTCTCAGAAAAACTTGCCTGG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTATAACTGGATGAAATaGTACGCAGCCAAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSYNWMK*YAAKGL
Trigger: AAGGCCCTTGGCTGCGTATCATTTCATCCAGTTATA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCCACTCATGTCATCCTaGCTTGAACCAAAATGCTTG +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSPLMSS*LEPKCL
Trigger: CAAGCATTTTGGTTCAAGTCAGGATGACATGAGTGG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTCTGTTTTTGGAAAGTaGTCATGCCTCTCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSSVFGK*SCLSGK
Trigger: CTTGCCTGAGAGGCATGATCACTTTCCAAAAACAGA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAAATTCCCTGGGTTTaGAAGGCAGCTGGAATATTA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKIPWV*KAAGIL
Trigger: TAATATTCCAGCTGCCTTTCAAACCCAGGGAATTTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACTGCATGCCTGACATaGCTCTTACAAGGTTTTGGA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTACLT*LLQGFG
Trigger: TCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGCTGTGATTTCCAAGTaGCAGGTAGTTAGGTGTACA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSAVISK*QVVRCT
Trigger: TGTACACCTAACTACCTGGCACTTGGAAATCACAGC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAAAGTAATTGCTCACTaGCATGCCCCTATGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNKVIAH*HAPMRN
Trigger: ATTTCTCATAGGGGCATGCCAGTGAGCAATTACTTT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCAGGTCCCAATCATGTaGTTTCTCCAGGTGAAACAA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSQVPIM*FLQVKQ
Trigger: TTGTTTCACCTGGAGAAACCACATGATTGGGACCTG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGTCGAATATTTTCCATaGTTGGTCAGACTCAGACTT +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLVEYFP*LVRLRL
Trigger: AAGTCTGAGTCTGACCAACCATGGAAAATATTCGAC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAACTGGAAATACTTCTaGGTCATTACCATCCTAGGA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVNWKYF*VITILG
Trigger: TCCTAGGATGGTAATGACCCAGAAGTATTTCCAGTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGACACCACTAGACAACTaGAAATACTTCTGGGTCATT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVTPLDN*KYFWVI
Trigger: AATGACCCAGAAGTATTTCCAGTTGTCTAGTGGTGT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCCTCTTACAAGGTTTTaGAGAACTCCAAATAGTCCT +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLPLTRF*RTPNSP
Trigger: AGGACTATTTGGAGTTCTCCAAAACCTTGTAAGAGG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCATATTGGGAGGTGGTaGACATATTATTATTGGCTG +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVHIGRW*TYYYWL
Trigger: CAGCCAATAATAATATGTCCACCACCTCCCAATATG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAACTGTGAACCATATTaGGAGGTGGTGGACATATTA +
Preference number: 2 (lower is better)
Translates to: NNASAGILQMRESQNIRVNCEPY*EVVDIL
Trigger: TAATATGTCCACCACCTCCCAATATGGTTCACAGTT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR CAA 90 bp AGAGAAGAAACAAAGATCTCTCAACGACTCCTGGGAATAGATTTCTaGTGTCAATGTGAAATTTATAGCGACACTCCTTCTACTTTTCCT +
Preference number: 2 (lower is better)
Translates to: REETKISQRLLGIDF*CQCEIYSDTPSTFP
Trigger: AGGAAAAGTAGAAGGAGTGTCGCTATAAATTTCACATTGACACAAGAAATCTATTCCCAGGAGTCGTTGAGAGATCTTTGTTTCTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 90 bp AGATTACTGCCAGATAGATTTAAGCTAGTTATTAGTAAGAATATTTaGGATTTGGAGATAACAGAGTCTAGGGCCCAACAGCCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: RLLPDRFKLVISKNI*DLEITESRAQQPRE
Trigger: TTCCCTTGGCTGTTGGGCCCTAGACTCTGTTATCTCCAAATCCAAAATATTCTTACTAATAACTAGCTTAAATCTATCTGGCAGTAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACTGGCATGCCCCTATaGGAAATTTCTGCAATGTTA +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTGMPL*EISAML
Trigger: TAACATTGCAGAAATTTCTCATAGGGGCATGCCAGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATAAAGGCTGATTCCTaGTGTTTGATATCACTGATC +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLIKADS*CLISLI
Trigger: GATCAGTGATATCAAACATCAGGAATCAGCCTTTAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACCATTGTTCTGCAGCTaGCTTAATTCTCCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKPLFCS*LNSPLY
Trigger: ATAAAGAGGAGAATTAAGTCAGCTGCAGAACAATGG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCCAAGGGCCTTTATTTaGGAAATTAAATCTAAACGC +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLPRAFI*EIKSKR
Trigger: GCGTTTAGATTTAATTTCTCAAATAAAGGCCCTTGG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGAAGTAGGTCCTTATaGTATCTTGACTATGGATCC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGSRSL*YLDYGS
Trigger: GGATCCATAGTCAAGATATCATAAGGACCTACTTCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCATGTCATCCTGACTTaGACCAAAATGCTTGATTTT +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVHVILT*TKMLDF
Trigger: AAAATCAAGCATTTTGGTTCAAGTCAGGATGACATG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGAGATTATTTGAATaGCTGCCACAGCTTCTGTCC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMRLFE*LPQLLS
Trigger: GGACAGAAGCTGTGGCAGTCATTCAAATAATCTCAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACAGTAGGCTCTTGGTaGATCAGTTTGGGAAATTCA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTVGSW*ISLGNS
Trigger: TGAATTTCCCAAACTGATTCACCAAGAGCCTACTGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAATACTGAAAACTTGTaGCTCCCTCAGCGTTATTCT +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKNTENL*LPQRYS
Trigger: AGAATAACGCTGAGGGAGTCACAAGTTTTCAGTATT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGCATTATTGTTACTaGAATTTGAGGGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLHYCY*NLRVSL
Trigger: GAGAGAAACCCTCAAATTTCAGTAACAATAATGCAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAATTGCTCACTGGCATaGCCCTATGAGAAATTTCTG +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVNCSLA*PYEKFL
Trigger: CAGAAATTTCTCATAGGGGCATGCCAGTGAGCAATT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAAGGCCTTGGTCACTTaGACCCTGGCATTATTTTTA +
Preference number: 2 (lower is better)
Translates to: SACNEREVCFMLTCKFKVKALVT*TLALFL
Trigger: TAAAAATAATGCCAGGGTGCAAGTGACCAAGGCCTT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAAATGTTTAAGGTCCTaGAGAAAGTCAGTGACTGTA +
Preference number: 2 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLKCLRS*RKSVTV
Trigger: TACAGTCACTGACTTTCTGCAGGACCTTAAACATTT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGTACAAAGTTTGACATaGTCTAGAGTGACAACCCAA +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKVQSLT*SRVTTQ
Trigger: TTGGGTTGTCACTCTAGAGCATGTCAAACTTTGTAC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCCTGTATACTTGGGATaGACTTTATTGGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSPVYLG*TLLAGK
Trigger: TTTGCCAGCCAATAAAGTGCATCCCAAGTATACAGG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGATTTTGGGTTGTTaGATGGCCTTGATTATTGCA +
Preference number: 2 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLILGC*MALIIA
Trigger: TGCAATAATCAAGGCCATGCAACAACCCAAAATCAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAGGGCCCAAATTTTGTaGTCAGCTAATGTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRAQIL*SANVSY
Trigger: ATAGCTAACATTAGCTGAGCACAAAATTTGGGCCCT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTGTGGATATTGTTTTaGAGAACTTCCACCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLWILF*RTSTLF
Trigger: GAAGAGGGTGGAAGTTCTCCAAAACAATATCCACAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGTCAGACTTTGTTGTaGATATTGTTTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGQTLL*ILFWRT
Trigger: AGTTCTCCAAAACAATATCCACAACAAAGTCTGACC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACCAAGGGCCTTTATTTaGGAAATTAAATCTAAACGC +
Preference number: 2 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKPRAFI*EIKSKR
Trigger: GCGTTTAGATTTAATTTCTCAAATAAAGGCCCTTGG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGTACACCTTTATGTaGGTCCTGCCTTTTACATGT +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMYTFM*VLPFTC
Trigger: ACATGTAAAAGGCAGGACGCACATAAAGGTGTACAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATTTTGCCTGGTGTCTaGATCCTGTGGGAATTTATT +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSILPGV*ILWEFI
Trigger: AATAAATTCCCACAGGATCCAGACACCAGGCAAAAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAGATTAAAGTGGCAATaGTCAGATTCCCAATCTTAC +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSRLKWQ*SDSQSY
Trigger: GTAAGATTGGGAATCTGAGCATTGCCACTTTAATCT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATTCTAAGATTAAAGTaGCAATGCTCAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSILRLK*QCSDSQ
Trigger: TTGGGAATCTGAGCATTGCCACTTTAATCTTAGAAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGTGAGAGAATAGAATaGCAAGGAACGTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGERIE*QGTWEK
Trigger: CTTCTCCCACGTTCCTTGCAATTCTATTCTCTCACC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGTTTACAAGGTAACCTaGCCTGAATTATCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLVYKVT*PELSWS
Trigger: GGACCAGGATAATTCAGGCAAGGTTACCTTGTAAAC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp CTGCGCCCTCCTAGGTCAGCCCAACTGTTGCAGGTCTaGAGTGGGGTAGTCTCAGGGATAGGGTTGCCAACT +
Preference number: 3 (lower is better)
Translates to: LRPPRSAQLLQV*SGVVSGIGLPT
Trigger: AGTTGGCAACCCTATCCCTGAGACTACCCCACTTCAGACCTGCAACAGTTGGGCTGACCTAGGAGGGCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp ACAGTGTGGAAAGGAGGGATAAGGACAGCTGTGAGCTaGGCCCTCCTAGGTCAGCCCAACTGTTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: TVWKGGIRTAVS*ALLGQPNCCRS
Trigger: AGACCTGCAACAGTTGGGCTGACCTAGGAGGGCGCAGCTCACAGCTGTCCTTATCCCTCCTTTCCACACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp AAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTaGAAAGGAGGGATAAGGACAGCTGTGAGCTGCGCC +
Preference number: 3 (lower is better)
Translates to: KARLLTLCPRTV*KGGIRTAVSCA
Trigger: GGCGCAGCTCACAGCTGTCCTTATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp GGCCCCAACCTGAAAGGTGGCACATATAGCCCCTGGTaGGCAGACAGGGAAAGCAAATTCCTCTTACTCCAG +
Preference number: 3 (lower is better)
Translates to: GPNLKGGTYSPW*ADRESKFLLLQ
Trigger: CTGGAGTAAGAGGAATTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCCACCTTTCAGGTTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGAATATTTTCCATGGTaGGTCAGACTCAGACTTAAA +
Preference number: 3 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLEYFPW*VRLRLK
Trigger: TTTAAGTCTGAGTCTGACCAACCATGGAAAATATTC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp CTTGGCCCCAACCTGAAAGGTGGCACATATAGCCCCTaGTGGGCAGACAGGGAAAGCAAATTCCTCTTACTC +
Preference number: 3 (lower is better)
Translates to: LGPNLKGGTYSP*WADRESKFLLL
Trigger: GAGTAAGAGGAATTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCCACCTTTCAGGTTGGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp GCCTGCCTGTTCCTTTTAGACGGGGCACTAAGACTGTaGAAGCAGGTGCAGTTTACAAGTCTGGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: ACLFLLDGALRL*KQVQFTSLAVP
Trigger: AGGGACAGCCAGACTTGTAAACTGCACCTGCTTCCACAGTCTTAGTGCCCCGTCTAAAAGGAACAGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp CAGGCATCTTTGTGTCCCCCAGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGGTCATGTTTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: QASLCPPESNDM*TQDQRGSCFWE
Trigger: TTCCCAGAAACATGACCCTCGCTGGTCTTGGGTCCACATATCATTGGACTCTGGGGGACACAAAGATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTACAATGCCTGCTTCTaGAAAGAAGTCGGCACTTTC +
Preference number: 3 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSYNACF*KEVGTF
Trigger: GAAAGTGCCGACTTCTTTCAAGAAGCAGGCATTGTA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp GAAATTCCGGGGTCTGATGAGACTGTGGAAACCATGTaGTACTGTAGGGAGAGCACAGGTTTGGATGCCAGA +
Preference number: 3 (lower is better)
Translates to: EIPGSDETVETM*YCRESTGLDAR
Trigger: TCTGGCATCCAAACCTGTGCTCTCCCTACAGTACCACATGGTTTCCACAGTCTCATCAGACCCCGGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp TCTCAGGGAGTGAAATTCCGGGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTAGGGAGAGCACAGGTT +
Preference number: 3 (lower is better)
Translates to: SQGVKFRGLMRL*KPCGTVGRAQV
Trigger: AACCTGTGCTCTCCCTACAGTACCACATGGTTTCCACAGTCTCATCAGACCCCGGAATTTCACTCCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAGTTACTTAGCCTCTTaGTGCCTCAGAATCTCATCT +
Preference number: 3 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSYLAS*CLRISS
Trigger: AGATGAGATTCTGAGGCACAAAGAGGCTAAGTAACT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp TGGTCCAAGATGAGACCTATGCTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTACTGCATGCCTGACATG +
Preference number: 3 (lower is better)
Translates to: WSKMRPMLPVPS*SCRCFYCMPDM
Trigger: CATGTCAGGCATGCAGTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTCTCATCTTGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp ATATGTGATGCTGGTTGGCTGGAAGCGGTAGGTGTTTaGGGCGTGTGGTCTAGTGCACTGTGGGAATTTGTT +
Preference number: 3 (lower is better)
Translates to: ICDAGWLEAVGV*GVWSSALWEFV
Trigger: AACAAATTCCCACAGTGCACTAGACCACACGCCTCAAACACCTACCGCTTCCAGCCAACCAGCATCACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp GCCATCTCCTGGACGTTTGAAATAAAATCGGCAAGATaGGTGCTTCAGCGCCTGCCTGTTCCTTTTAGACGG +
Preference number: 3 (lower is better)
Translates to: AISWTFEIKSAR*VLQRLPVPFRR
Trigger: CCGTCTAAAAGGAACAGGCAGGCGCTGAAGCACTCATCTTGCCGATTTTATTTCAAACGTCCAGGAGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp GAGGGAAGGAGAGTTTGCTGCCATCTCCTGGACGTTTaGAATAAAATCGGCAAGATGAGTGCTTCAGCGCCT +
Preference number: 3 (lower is better)
Translates to: EGRRVCCHLLDV*NKIGKMSASAP
Trigger: AGGCGCTGAAGCACTCATCTTGCCGATTTTATTTCAAACGTCCAGGAGATGGCAGCAAACTCTCCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp AATCCTCCGAGTATCTTCTCTGTGATATCAAACAGGTaGCTGAGATTGACAGACCAGAGCTGCTCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: NPPSIFSVISNR*LRLTDQSCSLS
Trigger: GGACAGGGAGCAGCTCTGGTCTGTCAATCTCAGCCACCTGTTTGATATCACAGAGAAGATACTCGGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp ACCCTCTTCTATAAAGTGGGACTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGCCCAGCTGAAGTTGTA +
Preference number: 3 (lower is better)
Translates to: TLFYKVGLYGPR*DLCCQCPAEVV
Trigger: TACAACTTCAGCTGGGCACTGGCAGCATAGGTCTCATCTTGGACCATACAGTCCCACTTTATAGAAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp ACCAGTTCTGGGATTCACTCTGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTTACATGTCCATGGAAC +
Preference number: 3 (lower is better)
Translates to: TSSGIHSALLED*GEYAVLTCPWN
Trigger: GTTCCATGGACATGTAAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGCAGAGTGAATCCCAGAACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp CCTGTCTTTTCCTCAGGACCCATGAGATTATTTGAATaGCTGCCACAGCTTCTGTCCCCACTCATGTCATCC +
Preference number: 3 (lower is better)
Translates to: PVFSSGPMRLFE*LPQLLSPLMSS
Trigger: GGATGACATGAGTGGGGACAGAAGCTGTGGCAGTCATTCAAATAATCTCATGGGTCCTGAGGAAAAGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp CCTTCCTCCGAGCTGCTGAAACCACATTTGCCACAATaGATTCCTGGATGTTTCTGGGTTGGAAAGCATCAT +
Preference number: 3 (lower is better)
Translates to: PSSELLKPHLPQ*IPGCFWVGKHH
Trigger: ATGATGCTTTCCAACCCAGAAACATCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAGCTCGGAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACGGTACATGTCTATTTaGGGGTGCTCCTGGATTTTT +
Preference number: 3 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIRYMSI*GCSWIF
Trigger: AAAAATCCAGGAGCACCCCAAAATAGACATGTACCG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTCAACAGATTTCCTTaGCAGGGAACAAGTAATACA +
Preference number: 3 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTFNRFP*QGTSNT
Trigger: TGTATTACTTGTTCCCTGCAAAGGAAATCTGTTGAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCCTGCTTTGTGGCCCTaGGCCAACCCTGGTAGGACA +
Preference number: 3 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLPALWP*ANPGRT
Trigger: TGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAAAAATGTCTATTGCTaGGAGCTACCAAACTCTAAG +
Preference number: 3 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSKNVYC*ELPNSK
Trigger: CTTAGAGTTTGGTAGCTCCAAGCAATAGACATTTTT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp CTGAAGTGGGGTAGTCTCAGGGATAGGGTTGCCAACTaGTCCACTTTCAGTGTAATAGGCCTATTTAAGCTT +
Preference number: 3 (lower is better)
Translates to: LKWGSLRDRVAN*STFSVIGLFKL
Trigger: AAGCTTAAATAGGCCTATTACACTGAAAGTGGAGCAGTTGGCAACCCTATCCCTGAGACTACCCCACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp ATCCTGTGGGAATTTATTAGCCTGCTTTGTGGCCCTTaGCCAACCCTGGTAGGACATCTAGAGAAGAATTCA +
Preference number: 3 (lower is better)
Translates to: ILWEFISLLCGP*PTLVGHLEKNS
Trigger: TGAATTCTTCTCTAGATGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGGCTAATAAATTCCCACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp TCCCCTTGGGTGTGGGTTGTAGTTGTAATCAGCTACTaGAAGACAGTAATCAGACCTGGTTTCCATGGACAT +
Preference number: 3 (lower is better)
Translates to: SPWVWVVVVISY*KTVIRPGFHGH
Trigger: ATGTCCATGGAAACCAGGTCTGATTACTGTCTTCCAGTAGCTGATTACAACTACAACCCACACCCAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGCCAAGATCGCACCATaGCACTCCAGACTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: SACNEREVCFMLTCKFKVAKIAP*HSRLGG
Trigger: CCCACCCAGTCTGGAGTGCAATGGTGCGATCTTGGC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCCTGCTTTGTGGCCCTaGGCCAACCCTGGTAGGACA +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSPALWP*ANPGRT
Trigger: TGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATTTCTCTTTATTCAATaGCCTCTGAGTAGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIFLFIQ*PLSSAV
Trigger: CACAGCACTACTCAGAGGCAATTGAATAAAGAGAAA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTTGAACCAAAATGCTaGATTTTGGGTTGTTGCATG +
Preference number: 3 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILEPKC*ILGCCM
Trigger: CATGCAACAACCCAAAATCAAGCATTTTGGTTCAAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp GATCAGTCATTCATTGACCACATGGCATCAAACCTGTaGAGTGACCTAGGCTCCAGCATTAACCCATCATTT +
Preference number: 3 (lower is better)
Translates to: DQSFIDHMASNL*SDLGSSINPSF
Trigger: AAATGATGGGTTAATGCTGGAGCCTAGGTCACTGCACAGGTTTGATGCCATGTGGTCAATGAATGACTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp CTGATTCAAGGGCTTCTCCAGAAGATGGGGTTTCATTaGCATGACGCTCATAGGATGACCTGTCATTTTTGT +
Preference number: 3 (lower is better)
Translates to: LIQGLLQKMGFH*HDAHRMTCHFC
Trigger: ACAAAAATGACAGGTCATCCTATGAGCGTCATGCCAATGAAACCCCATCTTCTGGAGAAGCCCTTGAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp AACAATGTGCTTGTTAGGATCAAAGCCGTCACCAAGTaGGTCTGCCTGTTTCTTTGTTCCGTACACTCTTGT +
Preference number: 3 (lower is better)
Translates to: NNVLVRIKAVTK*VCLFLCSVHSC
Trigger: ACAAGAGTGTACGGAACAAAGAAACAGGCAGACCCACTTGGTGACGGCTTTGATCCTAACAAGCACATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTAACAACAATGAAATaGTTGTGGGAGCCATATAGA +
Preference number: 3 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLTTMK*LWEPYR
Trigger: TCTATATGGCTCCCACAACAATTTCATTGTTGTTAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGTCTCAGGGATAGGGTaGCCAACTGCTCCACTTTCA +
Preference number: 3 (lower is better)
Translates to: VLLFISVIPPTMSCDISVVSGIG*PTAPLS
Trigger: TGAAAGTGGAGCAGTTGGCAACCCTATCCCTGAGAC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCGTCTCCATCCCCTaGGGTGTGGGTTGTAGTTGT +
Preference number: 3 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGVSIP*GVGCSC
Trigger: ACAACTACAACCCACACCCAAGGGGATGGAGACGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 72 bp TTCGTGGGTATGGCAATAAGGAGCAGGTGTTTGATCTaGTTATTTGATGGGCATGCTAACAAGGCATGTGTC +
Preference number: 3 (lower is better)
Translates to: FVGMAIRSRCLI*LFDGHANKACV
Trigger: GACACATGCCTTGTTAGCATGCCCATCAAATAATCAGATCAAACACCTGCTCCTTATTGCCATACCCACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR TCA 72 bp TTGCCAGGTATAAATTACCATAACTCTGGTAATATGTaGTGCTGGTTGGCTGGAAGCGGTAGGTGTTTGAGG +
Preference number: 3 (lower is better)
Translates to: LPGINYHNSGNM*CWLAGSGRCLR
Trigger: CCTCAAACACCTACCGCTTCCAGCCAACCAGCATCACATATTACCAGAGTTATGGTAATTTATACCTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp ATGGAACCTTCCTTCCTCCTAGAATCCCAAGCGTTATaGAGATTCATTATAGCACAACATTCCCGTCAGGAA +
Preference number: 3 (lower is better)
Translates to: MEPSFLLESQAL*RFIIAQHSRQE
Trigger: TTCCTGACGGGAATGTTGTGCTATAATGAATCTGCATAACGCTTGGGATTCTAGGAGGAAGGAAGGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp ATAATCCAATCTTCTCATTTGACAGATGGGGACCCCTaGACCCAGAATCTATTCCTGTCACAGGCATATATC +
Preference number: 3 (lower is better)
Translates to: IIQSSHLTDGDP*TQNLFLSQAYI
Trigger: GATATATGCCTGTGACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR TCA 72 bp GTGGAAGCAGGTGCAGTTTACAAGTCTGGCTGTCCCTaGCTGGATAAACAGGAAAACTATTTATGGGTTTTA +
Preference number: 3 (lower is better)
Translates to: VEAGAVYKSGCP*LDKQENYLWVL
Trigger: TAAAACCCATAAATAGTTTTCCTGTTTATCCAGTCAGGGACAGCCAGACTTGTAAACTGCACCTGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTaGGTCCTGCCTTTTACATGTTACTTCGTTATCCTG +
Preference number: 3 (lower is better)
Translates to: SPGETIAMYTFM*VLPFTCYFVIL
Trigger: CAGGATAACGAAGTAACATGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp GCTGAAGTTGTAGATGCTTTTACTGCATGCCTGACATaGCTCTTACAAGGTTTTGGAGAACTCCAAATAGTC +
Preference number: 3 (lower is better)
Translates to: AEVVDAFTACLT*LLQGFGELQIV
Trigger: GACTATTTGGAGTTCTCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATCTACAACTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp TGGAAACCATGTGGTACTGTAGGGAGAGCACAGGTTTaGATGCCAGACAAATATCTAAATCTAACCCTAATC +
Preference number: 3 (lower is better)
Translates to: WKPCGTVGRAQV*MPDKYLNLTLI
Trigger: GATTAGGGTTAGATTTAGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCTACAGTACCACATGGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGCATGTGTCATGGGATaGATGAAGCAGCTGCTTAAC +
Preference number: 3 (lower is better)
Translates to: NNASAGILQMRESQNIRVACVMG*MKQLLN
Trigger: GTTAAGCAGCTGCTTCATCAATCCCATGACACATGC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCGGTACATGTCTATTTaGGGGTGCTCCTGGATTTTT +
Preference number: 3 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRYMSI*GCSWIF
Trigger: AAAAATCCAGGAGCACCCCAAAATAGACATGTACCG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGGTGAGAGAATAGAATaGCAAGGAACGTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: VLLFISVIPPTMSCDISVGERIE*QGTWEK
Trigger: CTTCTCCCACGTTCCTTGCAATTCTATTCTCTCACC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGTTTACAAGGTAACCTaGCCTGAATTATCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: RLKWYCVPSNQASFSERSVYKVT*PELSWS
Trigger: GGACCAGGATAATTCAGGCAAGGTTACCTTGTAAAC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTCTTAGAGCAATTTaGCCTGGTGTCTGGATCCTG +
Preference number: 3 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLLRAI*PGVWIL
Trigger: CAGGATCCAGACACCAGGCAAAATTGCTCTAAGAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGCTGAAACCACATTaGCCACAATGGATTCCTGGA +
Preference number: 3 (lower is better)
Translates to: NNASAGILQMRESQNIRVLLKPH*PQWIPG
Trigger: TCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR TCA 72 bp CATTATAGCACAACATTCCCGTCAGGAAGAGAGGTTTaGCACATGATTAAGGGGAAACTTGTGGAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: HYSTTFPSGREV*HMIKGKLVERE
Trigger: TTCTCTTTCCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGACGGGAATGTTGTGCTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp CTGGAAGACAGTAATCAGACCTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTGAAGCCTGCCTATAAT +
Preference number: 3 (lower is better)
Translates to: LEDSNQTWFPWT*LQNHFLKPAYN
Trigger: ATTATAGGCAGGCTTCAAGAAATGATTCTGCAATCATGTCCATGGAAACCAGGTCTGATTACTGTCTTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
3UTR GCA 72 bp AAACAATCATTTCTTTTTGATGACCATGACTTCAAATaGCCTGCCTGCTGGGCCAGTTGTGACTCATCAAAT +
Preference number: 3 (lower is better)
Translates to: KQSFLFDDHDFK*PACWASCDSSN
Trigger: ATTTGATGAGTCACAACTGGCCCAGCAGGCAGGGCATTTGAAGTCATGGTCATCAAAAAGAAATGATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp TGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATaGACTTTATTGGCTGGCAAACCTTTGATAAAATCA +
Preference number: 3 (lower is better)
Translates to: CRSLAFSPVYLG*TLLAGKPLIKS
Trigger: TGATTTTATCAAAGGTTTGCCAGCCAATAAAGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGCATGTGTCATGGGATaGATGAAGCAGCTGCTTAAC +
Preference number: 3 (lower is better)
Translates to: SACNEREVCFMLTCKFKVACVMG*MKQLLN
Trigger: GTTAAGCAGCTGCTTCATCAATCCCATGACACATGC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAGTAAGTTGAGGACTTaGCTAGGCATTCTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSSKLRT*LGILRD
Trigger: GTCCCTGAGAATGCCTAGCAAAGTCCTCAACTTACT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGTTGTGGATATTGTTTaGGAGAACTTCCACCCTCTT +
Preference number: 3 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLVVDIV*ENFHPL
Trigger: AAGAGGGTGGAAGTTCTCCAAAACAATATCCACAAC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAGGGAGAGCACAGGTTaGGATGCCAGACAAATATCT +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSRESTG*DARQIS
Trigger: AGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp AAAGCTATCTACAAAGCAGAGACAGTAGGCTCTTGGTaGATCAGTTTGGGAAATTCACAATTAAGCAGTCTC +
Preference number: 3 (lower is better)
Translates to: KAIYKAETVGSW*ISLGNSQLSSL
Trigger: GAGACTGCTTAATTGTGAATTTCCCAAACTGATTCACCAAGAGCCTACTGTCTCTGCTTTGTAGATAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CCA 72 bp AAAAGATTAGATAATCCAATCTTCTCATTTGACAGATaGGGACCCCTGAACCCAGAATCTATTCCTGTCACA +
Preference number: 3 (lower is better)
Translates to: KRLDNPIFSFDR*GPLNPESIPVT
Trigger: TGTGACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGATTATCTAATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTAAAGAAGCACCACTaGTTACATAGGCTTCTGTGG +
Preference number: 3 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLKKHH*LHRLLW
Trigger: CCACAGAAGCCTATGTAACAAGTGGTGCTTCTTTAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATCAGGGCCCAAATTTaGTGCTCAGCTAATGTTAGC +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSIRAQI*CSANVS
Trigger: GCTAACATTAGCTGAGCACAAAATTTGGGCCCTGAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp ACTTTCAGTGTAATAGGCCTATTTAAGCTTCAACTATaGTACCAGGTTACTCAGGATACCAACTATCCTGTT +
Preference number: 3 (lower is better)
Translates to: TFSVIGLFKLQL*YQVTQDTNYPV
Trigger: AACAGGATAGTTGGTATCCTGAGTAACCTGGTAGCATAGTTGAAGCTTAAATAGGCCTATTACACTGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGAAATTAAGTAAGTaGAGGACTTTGCTAGGCATT +
Preference number: 3 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLKLSK*RTLLGI
Trigger: AATGCCTAGCAAAGTCCTCAACTTACTTAATTTCAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACAACAATGAAATTGTaGTGGGAGCCATATAGAGAA +
Preference number: 3 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTTMKL*WEPYRE
Trigger: TTCTCTATATGGCTCCCACAACAATTTCATTGTTGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTCAACAGATTTCCTTaGCAGGGAACAAGTAATACA +
Preference number: 3 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLFNRFP*QGTSNT
Trigger: TGTATTACTTGTTCCCTGCAAAGGAAATCTGTTGAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACTTTGTTGTGGATATaGTTTTGGAGAACTTCCACC +
Preference number: 3 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTLLWI*FWRTST
Trigger: GGTGGAAGTTCTCCAAAACAATATCCACAACAAAGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGGTTTAGTGTAACTTaGGAGTTATCTCTGAGACAT +
Preference number: 3 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRFSVT*ELSLRH
Trigger: ATGTCTCAGAGATAACTCCAAAGTTACACTAAACCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGAAATTAAGTAAGTaGAGGACTTTGCTAGGCATT +
Preference number: 3 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLKLSK*RTLLGI
Trigger: AATGCCTAGCAAAGTCCTCAACTTACTTAATTTCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTTGAAGTACAAAGTTaGACATGCTCTAGAGTGACA +
Preference number: 3 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKFEVQS*TCSRVT
Trigger: TGTCACTCTAGAGCATGTCAAACTTTGTACTTCAAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGTCCTTATGATATCTaGACTATGGATCCCAGATTT +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGPYDI*TMDPRF
Trigger: AAATCTGGGATCCATAGTCAAGATATCATAAGGACC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTAACAACAATGAAATaGTTGTGGGAGCCATATAGA +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLTTMK*LWEPYR
Trigger: TCTATATGGCTCCCACAACAATTTCATTGTTGTTAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTTTGAAGTACAAAGTTaGACATGCTCTAGAGTGACA +
Preference number: 3 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSFEVQS*TCSRVT
Trigger: TGTCACTCTAGAGCATGTCAAACTTTGTACTTCAAA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp AATCTCAGTCAATATAGGTTATACCTTCACTACATTTaGACCTTTCACCATAGGAGGACAGCTGTTATGTTA +
Preference number: 3 (lower is better)
Translates to: NLSQYRLYLHYI*TFHHRRTAVML
Trigger: TAACATAACAGCTGTCCTCCTATGGTGAAAGGTTCAAATGTAGTGAAGGTATAACCTATATTGACTGAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp CAAATGTGTCTTACAAAACACGTTCCTAACAAGGTATaGTTTACACTACCAATGCAGAAACTGTGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: QMCLTKHVPNKV*FTLPMQKLCLF
Trigger: AAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAGGAACGTGTTTTGTAAGACACATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR GCA 72 bp GAAAGATACTCAGCACAAATCAGGGCCCAAATTTTGTaGTCAGCTAATGTTAGCTATTATCAAAACTTATGT +
Preference number: 3 (lower is better)
Translates to: ERYSAQIRAQIL*SANVSYYQNLC
Trigger: ACATAAGTTTTGATAATAGCTAACATTAGCTGAGCACAAAATTTGGGCCCTGATTTGTGCTGAGTATCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR TCA 72 bp AATTGGAAGGAACCTTATTCTCTGCATTATTGTTACTaGAATTTGAGGGTTTCTCTCATCACTATTCTGTTC +
Preference number: 3 (lower is better)
Translates to: NWKEPYSLHYCY*NLRVSLITILF
Trigger: GAACAGAATAGTGATGAGAGAAACCCTCAAATTTCAGTAACAATAATGCAGAGAATAAGGTTCCTTCCAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACGTCAGGGGGAGGAGTaGCTGCAGAGTAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLRQGEE*LQSKVE
Trigger: CTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAAGGGGGTAGCTGGCTaGTTCACAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLKGVAG*FTDPGK
Trigger: CTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACGTCATGTTTCGGGTTaGCGAGAAGGGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLRHVSG*REGGSW
Trigger: CCAGCTACCCCCTTCTCGCCAACCCGAAACATGACG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACACCTCCAGCTCCAGTaGCCCGTTTGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLHLQLQ*PVCLLN
Trigger: ATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGGAGGATGAGGACTTaGCTGCAGGTTTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGRMRT*LQVLEQ
Trigger: TTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCATCTCCCTCAGAGTaGGGTCAGACTTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPSPSE*GQTLLW
Trigger: CCACAACAAAGTCTGACCTCACTCTGAGGGAGATGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLESNDM*TQDQRG
Trigger: CCCTCGCTGGTCTTGGGTCCACATATCATTGGACTC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCACTTGCCCTGAGCTaGGAGTTTGCTCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSLALS*EFALFR
Trigger: CCTGAACAGAGCAAACTCCCAGCTCAGGGCAAGTGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATACTGGTTGGGAGGATaGGGACTTGACTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLYWLGG*GLDCRF
Trigger: AAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPRCSF*SQSSAF
Trigger: GAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCTTGGAGTTGGGGTTaGGAGCATCCGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPWSWG*EHPLEE
Trigger: TTCTTCTAACGGATGCTCCCAACCCCAACTCCAAGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGGGCACTAAGACTGTaGAAGCAGGTGCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGALRL*KQVQFT
Trigger: TGTAAACTGCACCTGCTTCCACAGTCTTAGTGCCCC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLKDALS*YGWCFM
Trigger: CATGAAGCACCAACCGTATCAGCTCAATGCATCCTT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCACTGGGGATGCACTaGCTGGTGAGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTALGMH*LVRRPL
Trigger: CAGAGGCCTCCTCACCAGTCAGTGCATCCCCAGTGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAACTCTGGTAATATGTaGTGCTGGTTGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLNSGNM*CWLAGS
Trigger: GCTTCCAGCCAACCAGCATCACATATTACCAGAGTT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGTCAGCTTCGGGCGCCTaGCGAGGACGCAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKESASGA*RGRKTG
Trigger: CCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGA...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAGGACAGCTGTGAGCTaGGCCCTCCTAGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSRTAVS*ALLGQP
Trigger: GGGCTGACCTAGGAGGGCGCAGCTCACAGCTGTCCT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGTCACCAAGTGGGTCTaGCTGTTTCTTTGTTCCGTA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLVTKWV*LFLCSV
Trigger: TACGGAACAAAGAAACAGGCAGACCCACTTGGTGAC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGGAAGGCAGGAGGTTaGGTGGGAGCCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGKAGG*VGATPG
Trigger: TCCAGGAGTGGCTCCCACCCAACCTCCTGCCTTCCC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATGTCCTAGGACAGTGTaGAAAGGAGGGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLCPRTV*KGGIRT
Trigger: TGTCCTTATCCCTCCTTTCCACACTGTCCTAGGACA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAAAGCCGTCACCAAGTaGGTCTGCCTGTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLKAVTK*VCLFLC
Trigger: ACAAAGAAACAGGCAGACCCACTTGGTGACGGCTTT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCAGAGGCTTTGCTCTaGTTTCGAATCTTTGCAACT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPEALL*FRIFAT
Trigger: AGTTGCAAAGATTCGAAATCAGAGCAAAGCCTCTGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCGTCAGGGGGAGGAGTaGCTGCAGAGTAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSRQGEE*LQSKVE
Trigger: CTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCTCTGCCCCCAAGCTaGGGTAGTCTTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPLPPS*GSLLPV
Trigger: GACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATAGGAACTCGTAAATaGTTGTCGCTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLIGTRK*LSLLSW
Trigger: CCAGCTCAAGAGCGACAATCATTTACGAGTTCCTAT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATATAACTGGATGAAATaGTACGCAGCCAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLYNWMK*YAAKGL
Trigger: AAGGCCCTTGGCTGCGTATCATTTCATCCAGTTATA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCTTTAGTATTCTCCTaGCTTCTCCCCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSLVFS*LLPIPK
Trigger: CTTTGGGATGGGGAGAAGTCAGGAGAATACTAAAGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACAGACCCAGAGGCTTTaGTCTGATTTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLQTQRL*SDFESL
Trigger: CAAAGATTCGAAATCAGAGCAAAGCCTCTGGGTCTG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGCTGTGATTTCCAAGTaGCAGGTAGTTAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLAVISK*QVVRCT
Trigger: TGTACACCTAACTACCTGGCACTTGGAAATCACAGC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGTGGGAGCCACTCCTaGAGACCAGACTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGGSHS*RPDWGN
Trigger: GTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCCCACC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAACTGGCCGGGAGAGATaGAGTGGGAGACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTTGRER*SGRLSS
Trigger: CGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTGCCACCTTGCAATCTaGACCCCCAGGGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTCHLAI*TPRAPL
Trigger: GAGGGGCGCCCTGGGGGTTCAGATTGCAAGGTGGCA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCCAGCAATCGGACTTaGAACCCCTCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTASNRT*NPSGEG
Trigger: GCCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTDGVGD*ARAAWA
Trigger: GGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTGCACATTCGTAGGTaGGGCAGCATTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLHIRR*GSIHWP
Trigger: CGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCAGGAAGAGAGGTTTaGCACATGATTAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSGREV*HMIKGK
Trigger: TTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCCCAGAATAATTGTTaGCTAACTCGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSQNNC*LTRQHQ
Trigger: TTGGTGTTGCCGAGTTAGTCAACAATTATTCTGGGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGCTTGCACCAAGAAATaGTACTTCACATGTATCCTC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLACTKK*YFTCIL
Trigger: GAGGATACATGTGAAGTAGCATTTCTTGGTGCAAGC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTRGGRA*FMARAE
Trigger: TTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATGCTAATAATTGTGTaGTCTCACCCTACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLMLIIV*SHPTVS
Trigger: GGAGACTGTAGGGTGAGAGCACACAATTATTAGCAT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAACTTCGTGGATGCTCTaGCTAGAAATTATGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLTSWML*LEIMLR
Trigger: CCTTAGCATAATTTCTAGGCAGAGCATCCACGAAGT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGATCCTCTGGAGGCCCTaGAAGCACCTTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKEILWRP*KHLPPS
Trigger: GCTCGGAGGAAGGTGCTTCCAGGGCCTCCAGAGGAT...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATCATTTCAAGCAAAGTaGACACTCAGCTTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLSFQAK*TLSFSY
Trigger: GTAGCTGAAGCTGAGTGTCCACTTTGCTTGAAATGA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGACAACGGTGCCCTTTaGTGGGTTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTDNGAL*WVGCGE
Trigger: TTCCCCACATCCAACCCATCAAAGGGCACCGTTGTC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTGCTTGTGGTCCTTTaGAGGGACCAGCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLLVVL*RDQPRS
Trigger: TGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCCACTGCACCAGGCTaGACAGCATTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPTAPG*TALTVG
Trigger: ACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAATACTGAAAACTTGTaGCTCCCTCAGCGTTATTCT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLNTENL*LPQRYS
Trigger: AGAATAACGCTGAGGGAGTCACAAGTTTTCAGTATT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTGGGATTGGCACCGTaGCACTCTAAGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLGLAP*HSKIPG
Trigger: CCCTGGAATCTTAGAGTGTCACGGTGCCAATCCCAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCACCCTTCTGTCTTCTaGCTGTCAGAGCAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSHPSVF*LSEQSR
Trigger: CCTCGACTGCTCTGACAGGCAGAAGACAGAAGGGTG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTHVQST*RPGRRV
Trigger: TACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGTACAAAGTTTGACATaGTCTAGAGTGACAACCCAA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLVQSLT*SRVTTQ
Trigger: TTGGGTTGTCACTCTAGAGCATGTCAAACTTTGTAC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTCACCCAGGCTGGACTaGAGCAGTACGATATGGGCT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSPRLD*SSTIWA
Trigger: AGCCCATATCGTACTGCTGCAGTCCAGCCTGGGTGA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTCAGGCCATCGGTCTaGGCAGCATCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLRPSV*AASCSL
Trigger: CAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGCTACTGCTGCTTGTaGTCCTTTGAAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGYCCL*SFEGTS
Trigger: GCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTTGAGAGCAGCCAGTaGGTAAGACGGCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLESSQ*VRRRVD
Trigger: ATCCACTCGCCGTCTTACCCACTGGCTGCTCTCAAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCTCTTACAAGGTTTTaGAGAACTCCAAATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPLTRF*RTPNSP
Trigger: AGGACTATTTGGAGTTCTCCAAAACCTTGTAAGAGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTATTGTGGATATTGTTTTaGAGAACTTCCACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLLWILF*RTSTLF
Trigger: GAAGAGGGTGGAAGTTCTCCAAAACAATATCCACAA...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGGGAACTTCAGTCTTaGCAGGGGCGAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGELQS*QGRGRI
Trigger: AATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAAGGCTGGGCTATTTTaGTGGAGGAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTKAGLF*WRRQRC
Trigger: GCACCGTTGTCTCCTCCATCAAAATAGCCCAGCCTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATGGTACCGAGTACACTaGCGAAGCCTGCACATTCGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTWYRVH*RSLHIR
Trigger: ACGAATGTGCAGGCTTCGTCAGTGTACTCGGTACCA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGCACTGGGGATGCACTaGCTGGTGAGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVALGMH*LVRRPL
Trigger: CAGAGGCCTCCTCACCAGTCAGTGCATCCCCAGTGC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGGTGCGGTAGAGGATaGGCACTCAGCTTCGGGCGC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGCGRG*ALSFGR
Trigger: GCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCACTCCTCCTGAGCCGTaGATGCCGCGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVTPPEP*MPRSVL
Trigger: AAGCACCGAGCGCGGCATGCACGGCTCAGGAGGAGT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCGAGCAGCGTGGGCCTaGACCGTGTCTGAATCGACC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRAAWA*TVSEST
Trigger: GGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGGGAGGCCATCCTTTaGATCTGGAGGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGEAIL*IWRLES
Trigger: ACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTCAAATGCCCTGCCTaGTGGGCCAGTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSFKCPA*WASCDS
Trigger: TGAGTCACAACTGGCCCAGCAGGCAGGGCATTTGAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTGGGAAGGGTTTGCTaGCTCATGCACTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVGRVC*LMHLTA
Trigger: AGCAGTCAAGTGCATGAGGCAGCAAACCCTTCCCAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGTTTTGAAAACAATGTaGTTGTTAGGATCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLVLKTM*LLGSKP
Trigger: CGGCTTTGATCCTAACAAGCACATTGTTTTCAAAAC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAACCCTGGGAAGGGTTTaGCCGTTCTATTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTTLGRV*PFYSWG
Trigger: TCCCCATGAATAGAACGGCCAAACCCTTCCCAGGGT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTTGACTGCAGGTTTTaGAGCAACAGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLDCRF*SNRRRG
Trigger: ACCCCTCCTCCTGTTGCTCCAAAACCTGCAGTCAAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTTGACTGCAGGTTTTaGAGCAACAGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLDCRF*SNRRRG
Trigger: ACCCCTCCTCCTGTTGCTCCAAAACCTGCAGTCAAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGGAAGGCAGGAGGTTaGGTGGGAGCCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGKAGG*VGATPG
Trigger: TCCAGGAGTGGCTCCCACCCAACCTCCTGCCTTCCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTCCTGGAAGCTCATTaGATGGTCCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTFLEAH*MVPLHQ
Trigger: CTGGTGCAGTGGGACCATCCAATGAGCTTCCAGGAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTGACATCACTTCCTTaGCCCCAACCTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLTSLP*PQPERW
Trigger: CCACCTTTCAGGTTGGGGCCAAGGAAGTGATGTCAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAACCATGCAGTGGATTTaGGATAATATACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLTMQWI*DNIHKA
Trigger: TGCCTTATGTATATTATCCCAAATCCACTGCATGGT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAATTCACCCTTAGAATaGGGGTGCTTGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTNSPLE*GCLQEP
Trigger: GGGCTCCTGCAAGCACCCCCATTCTAAGGGTGAATT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGTTGCAGGTCTGAAGTaGGGTAGTCTCAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTVAGLK*GSLRDR
Trigger: CCTATCCCTGAGACTACCCCACTTCAGACCTGCAAC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp ATCTTTGAGGTGGGAAGGGTTTGCTGCCTCATGCACTaGACTGCTGTCCTGACTGGGATTGGCACCGTGACA +
Preference number: 4 (lower is better)
Translates to: IFEVGRVCCLMH*TAVLTGIGTVT
Trigger: TGTCACGGTGCCAATCCCAGTCAGGACAGCAGTCAAGTGCATGAGGCAGCAAACCCTTCCCACCTCAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTTATGTCTCTCCTGTaGAAGGGACAGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLMSLL*KGQLQL
Trigger: GAGCTGCAACTGTCCCTTTCACAGGAGAGACATAAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCCTCTTGGCAAACATaGGGGCTCCCTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSSWQT*GLPCLW
Trigger: CCACAGGCAAGGGAGCCCTCATGTTTGCCAAGAGGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCAGAGGAGCTTTGCATaGAATTACAAGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSQRSFA*NYKPLP
Trigger: GGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTCTTGAGCTGGCAATaGAAACCGACTTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLLSWQ*KPTSWM
Trigger: CATCCACGAAGTCGGTTTTCATTGCCAGCTCAAGAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTCTTGAGCTGGCAATaGAAACCGACTTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLLSWQ*KPTSWM
Trigger: CATCCACGAAGTCGGTTTTCATTGCCAGCTCAAGAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTGCTCACAGAGCTCTaGGTTCTTACCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLLTEL*VLTDSS
Trigger: GGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAGGGGGAGGAGTGACTaGAGAGTAAGGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTRGRSD*RVRWRC
Trigger: GCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAATTGGATGGTCCCACTaGACCAGGCTGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTIGWSH*TRLNSI
Trigger: AATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAAT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCGAGCAGCGTGGGCCTaGACCGTGTCTGAATCGACC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCRAAWA*TVSEST
Trigger: GGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTACACTGACGAAGCCTaGACATTCGTAGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSYTDEA*TFVGEA
Trigger: TGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGTGGGAGCCACTCCTaGAGACCAGACTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGGSHS*RPDWGN
Trigger: GTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCCCACC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAGGCAGGAGGTTGGGTaGGAGCCACTCCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVRQEVG*EPLLET
Trigger: GGTCTCCAGGAGTGGCTCCCACCCAACCTCCTGCCT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLTDDF*GRPSFA
Trigger: TGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTTGCTTTGGCGAGGTaGGAATGCCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLALAR*ECPQAL
Trigger: CAGTGCCTGTGGGCATTCCCACCTCGCCAAAGCAAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATGTCCTGACTGGGATTaGCACCGTGACACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTCPDWD*HRDTLR
Trigger: TCTTAGAGTGTCACGGTGCCAATCCCAGTCAGGACA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGGGCACTAAGACTGTaGAAGCAGGTGCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGALRL*KQVQFT
Trigger: TGTAAACTGCACCTGCTTCCACAGTCTTAGTGCCCC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACCCTGCCGGGTACCTaGGATTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITLPGT*DYRHVP
Trigger: TGGCACATGCCTGTAATCCCAGGTACCCGGCAGGGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACACAAGGGTTGCCATTaGTGGAAACCACTTCATCTC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTHKGCH*WKPLHL
Trigger: GAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCCTCTTGGCAAACATaGGGGCTCCCTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSSWQT*GLPCLW
Trigger: CCACAGGCAAGGGAGCCCTCATGTTTGCCAAGAGGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCGTCAGGGGGAGGAGTaGCTGCAGAGTAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCRQGEE*LQSKVE
Trigger: CTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCCTCTGCCCCCAAGCTaGGGTAGTCTTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVPLPPS*GSLLPV
Trigger: GACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGGCCTGCACCGTGTCTaGATCGACCACATACTTCTC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIGLHRV*IDHILL
Trigger: GAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTGATGGCTGAGACTTaGGAGCAGCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILMAET*EQPVGK
Trigger: CTTACCCACTGGCTGCTCTCAAGTCTCAGCCATCAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAGGCGCAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRRRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTGCGCCT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGGCAGGAGAATTGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAGRRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCAATTCTCCTGCC...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACAACTGTTGCAGGTCTaGAGTGGGGTAGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIQLLQV*SGVVSG
Trigger: CCCTGAGACTACCCCACTTCAGACCTGCAACAGTTG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAAGTCTGGCTGTCCCTaGCTGGATAAACAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTKSGCP*LDKQEN
Trigger: GTTTTCCTGTTTATCCAGTCAGGGACAGCCAGACTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTTGCTCCTTGCCACCTTaGAATCTGAACCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAACSLPP*NLNPQG
Trigger: GCCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCA...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSHPLDV*CLRCPT
Trigger: AGTGGGACATCTGAGACAGCAAACATCCAGAGGATG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTCCAGTGCCCCGTTTaGCTTCTGAATTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLQCPV*LLNFEG
Trigger: TCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACGAGCAGCGTGGGCCTaGACCGTGTCTGAATCGACC +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTRAAWA*TVSEST
Trigger: GGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCTGTCCTACAATGCCTaGTTCTTGAAAGAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSLSYNA*FLKEVG
Trigger: GCCGACTTCTTTCAAGAAGCAGGCATTGTAGGACAG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTCACCAAGTGGGTCTaGCTGTTTCTTTGTTCCGTA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVTKWV*LFLCSV
Trigger: TACGGAACAAAGAAACAGGCAGACCCACTTGGTGAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACGATATGGGCTCACTaGAACCTCTGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITIWAH*NLCSPG
Trigger: ACCTGGGGAGCAGAGGTTGCAGTGAGCCCATATCGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCACCCAGGCTGGACTaGAGCAGTACGATATGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSPRLD*SSTIWA
Trigger: AGCCCATATCGTACTGCTGCAGTCCAGCCTGGGTGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCGAGGACGCAAGACTaGGTAATGCAGAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPRTQD*VMQSVR
Trigger: GCGGACGCTCTGCATTACCCAGTCTTGCGTCCTCGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTAGGGTGTATTTCCTaGCCCTCCGACGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILGCIS*PSDVAS
Trigger: AGAAGCGACGTCGGAGGGCCAGGAAATACACCCTAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSFGKKS*FSGHRS
Trigger: AGACCGATGGCCTGAGAACCACGACTTCTTACCAAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCGTCATGTTTCGGGTTaGCGAGAAGGGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRHVSG*REGGSW
Trigger: CCAGCTACCCCCTTCTCGCCAACCCGAAACATGACG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCGAATCGTAAAAGGCTaGCTGGGACCACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVRIVKG*LGPRGR
Trigger: CCTGCCCCGTGGTCCCAGCCAGCCTTTTACGATTCG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTCGTGCTTCTCCTTTTaGCCTCCTGCAATATTCCTG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSCFSF*PPAIFL
Trigger: CAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATCGTGCTTCTCCTTTTaGCCTCCTGCAATATTCCTG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTSCFSF*PPAIFL
Trigger: CAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGGCAGGAGGTTGGGTaGGAGCCACTCCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRQEVG*EPLLET
Trigger: GGTCTCCAGGAGTGGCTCCCACCCAACCTCCTGCCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTTTCTTGCCCATTTTaGAGGGCTGTGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSFSCPF*RAVQLM
Trigger: CATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAGGGAGGCTGACGTCTaGAGGTCTAACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTREADV*RSNSPF
Trigger: GAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCACTCCTTTCCTGCCTaGAGCCTGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCHSFPA*SLHPSV
Trigger: GACAGAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGCCAGCAATCGGACTTaGAACCCCTCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCASNRT*NPSGEG
Trigger: GCCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGGGAGGATGAGGACTTaGCTGCAGGTTTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTGRMRT*LQVLEQ
Trigger: TTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCTGCTTGTGGTCCTTTaGAGGGACCAGCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLLVVL*RDQPRS
Trigger: TGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCTGATGGCTGAGACTTaGGAGCAGCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLMAET*EQPVGK
Trigger: CTTACCCACTGGCTGCTCTCAAGTCTCAGCCATCAG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGGAGGGCTGTGCAGCTaGTGGCTGAGACTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFGGLCS*WLRLES
Trigger: GCTCTCAAGTCTCAGCCATCAGCTGCACAGCCCTCC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGCAGGAGAATTGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGRRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCAATTCTCCTGCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCAAATAGTCCTAGGATaGCCAGAAGGCATAGTCATG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSQIVLG*PEGIVM
Trigger: CATGACTATGCCTTCTGGTCATCCTAGGACTATTTG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCATCTCCCTCAGAGTaGGGTCAGACTTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPSPSE*GQTLLW
Trigger: CCACAACAAAGTCTGACCTCACTCTGAGGGAGATGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAATGATTGTCGCTCTTaGGCTGGCAATGAAAACCGA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSNDCRS*AGNENR
Trigger: TCGGTTTTCATTGCCAGCTCAAGAGCGACAATCATT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAACAATGCCTGCTTCTTaGAAGAAGTCGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTTMPAS*KKSALS
Trigger: AGAAAGTGCCGACTTCTTTCAAGAAGCAGGCATTGT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCACTCATGTCATCCTaGCTTGAACCAAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPLMSS*LEPKCL
Trigger: CAAGCATTTTGGTTCAAGTCAGGATGACATGAGTGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCACTGAGGAATCTTTaGGGTGGGAAGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPLRNL*GGKGLL
Trigger: CAGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGACGAAGCTTGGGTaGGGTAGAGGATGCGCACTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQTKLG*GRGCAL
Trigger: GAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATGTGAAAGGGACAGTTaGAGCTCAACCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGICERDS*SSTTGP
Trigger: TGGGCCTGTGGTTGAGCTGCAACTGTCCCTTTCACA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAGATCTGGATTATCTTaGTGGACCTCAGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTRSGLS*WTSGKG
Trigger: ACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILLPAL*LLMRRQ
Trigger: TTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACGTGGATCTTCTCCCTaGTCTGTGCCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIRGSSP*SVPSDE
Trigger: CTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAGGGGGAGGAGTGACTaGAGAGTAAGGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVRGRSD*RVRWRC
Trigger: GCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCACCTCCAGCTCCAGTaGCCCGTTTGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHLQLQ*PVCLLN
Trigger: ATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHVQST*RPGRRV
Trigger: TACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSILTGY*CLWSFE
Trigger: TTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAAT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAACTGCATGCCTGACATaGCTCTTACAAGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTTACLT*LLQGFG
Trigger: TCCAAAACCTTGTAAGAGGCATGTCAGGCATGCAGT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCTGTGATTTCCAAGTaGCAGGTAGTTAGGTGTACA +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTAVISK*QVVRCT
Trigger: TGTACACCTAACTACCTGGCACTTGGAAATCACAGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGAGGGAAGGAGAGTTTaGTGCCATCTCCTGGACGTT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTEGRRV*CHLLDV
Trigger: AACGTCCAGGAGATGGCAGCAAACTCTCCTTCCCTC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACATCAACACCCCCTTaGAGTTGGGGTTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITSTPP*SWGWEH
Trigger: ATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCGAGAAGGGGGTAGCTaGCTGATTCACAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCREGGS*LIHRPW
Trigger: CCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACGAATCGTAAAAGGCTaGCTGGGACCACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTRIVKG*LGPRGR
Trigger: CCTGCCCCGTGGTCCCAGCCAGCCTTTTACGATTCG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGGTGGGAGCCACTCCTaGAGACCAGACTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFGGSHS*RPDWGN
Trigger: GTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCCCACC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGCTACTGCTGCTTGTaGTCCTTTGAAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGYCCL*SFEGTS
Trigger: GCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGTCTAACTTTCATGTTTaGCGTCTCCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKESNFHV*RLHPLG
Trigger: CCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGA...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGTGATATCAAACAGGTaGCTGAGATTGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTVISNR*LRLTDQ
Trigger: CTGGTCTGTCAATCTCAGCCACCTGTTTGATATCAC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAATTCACCCTTAGAATaGGGGTGCTTGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGINSPLE*GCLQEP
Trigger: GGGCTCCTGCAAGCACCCCCATTCTAAGGGTGAATT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGTTGCAGGTCTGAAGTaGGGTAGTCTCAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIVAGLK*GSLRDR
Trigger: CCTATCCCTGAGACTACCCCACTTCAGACCTGCAAC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACATTCATTGACCACATaGCATCAAACCTGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTHSLTT*HQTCAV
Trigger: CACTGCACAGGTTTGATGCCATGTGGTCAATGAATG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTGCCACCTTGCAATCTaGACCCCCAGGGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVCHLAI*TPRAPL
Trigger: GAGGGGCGCCCTGGGGGTTCAGATTGCAAGGTGGCA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGCCACCTTGCAATCTaGACCCCCAGGGCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNCHLAI*TPRAPL
Trigger: GAGGGGCGCCCTGGGGGTTCAGATTGCAAGGTGGCA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGGCTTTCACTCCTCCTaGGCCGTGCATGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVGFHSS*AVHAAL
Trigger: GAGCGCGGCATGCACGGCTCAGGAGGAGTGAAAGCC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGCTTTCACTCCTCCTaGGCCGTGCATGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGFHSS*AVHAAL
Trigger: GAGCGCGGCATGCACGGCTCAGGAGGAGTGAAAGCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGGAGGATGAGGACTTaGCTGCAGGTTTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGRMRT*LQVLEQ
Trigger: TTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGACAACGGTGCCCTTTaGTGGGTTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCDNGAL*WVGCGE
Trigger: TTCCCCACATCCAACCCATCAAAGGGCACCGTTGTC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAAGGCTGGGCTATTTTaGTGGAGGAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVKAGLF*WRRQRC
Trigger: GCACCGTTGTCTCCTCCATCAAAATAGCCCAGCCTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACAGGCTGAACAGCATTaGCTGTTGGTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIQAEQH*LLVWKL
Trigger: CAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCCACTGCACCAGGCTaGACAGCATTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPTAPG*TALTVG
Trigger: ACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVDGVGD*ARAAWA
Trigger: GGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNDGVGD*ARAAWA
Trigger: GGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGATGGCTGAGACTTaGGAGCAGCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLMAET*EQPVGK
Trigger: CTTACCCACTGGCTGCTCTCAAGTCTCAGCCATCAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCTGCACATTCGTAGGTaGGGCAGCATTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFLHIRR*GSIHWP
Trigger: CGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGCACTGGGGATGCACTaGCTGGTGAGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSALGMH*LVRRPL
Trigger: CAGAGGCCTCCTCACCAGTCAGTGCATCCCCAGTGC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTCCTTGGCCCCAACCTaGAAGGTGGCACATATAGCC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVSLAPT*KVAHIA
Trigger: GGCTATATGTGCCACCTTTCAGGTTGGGGCCAAGGA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGAAGTAGGTCCTTATaGTATCTTGACTATGGATCC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGSRSL*YLDYGS
Trigger: GGATCCATAGTCAAGATATCATAAGGACCTACTTCC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGTATCAAAGATTCTCTaGCTTCTACCGTGTATCCTG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTVSKIL*LLPCIL
Trigger: CAGGATACACGGTAGAAGTCAGAGAATCTTTGATAC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCTCACAAGGACTGCTaGTTAAAAGCAGTAATCTGT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTAHKDC*LKAVIC
Trigger: ACAGATTACTGCTTTTAATCAGCAGTCCTTGTGAGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATTCAGGCTGCAGACTaGATCCAGGGGCCATTACTT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIIQAAD*IQGPLL
Trigger: AAGTAATGGCCCCTGGATTCAGTCTGCAGCCTGAAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAAACCAGCAAAATGTTaGGCTTCCCTTCGCCATTAT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTKPAKC*ASLRHY
Trigger: ATAATGGCGAAGGGAAGCTCAACATTTTGCTGGTTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTATAAAATCGGCAAGATaGGTGCTTCAGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTIKSAR*VLQRLP
Trigger: AGGCAGGCGCTGAAGCACTCATCTTGCCGATTTTAT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACATCTCCTGGACGTTTaGAATAAAATCGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTHLLDV*NKIGKM
Trigger: CATCTTGCCGATTTTATTTCAAACGTCCAGGAGATG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCAGCTTCGGGCGCCTaGCGAGGACGCAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSASGA*RGRKTG
Trigger: CCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLLPAL*LLMRRQ
Trigger: TTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCGTGGATCTTCTCCCTaGTCTGTGCCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRGSSP*SVPSDE
Trigger: CTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTACTCCTCCTGAGCCGTaGATGCCGCGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSTPPEP*MPRSVL
Trigger: AAGCACCGAGCGCGGCATGCACGGCTCAGGAGGAGT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAGAGTAAGGTGGAGGTaGAGGAAAGTCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIRVRWR*RKVSNG
Trigger: CCCATTGCTGACTTTCCTGCACCTCCACCTTACTCT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCACCTCCAGCTCCAGTaGCCCGTTTGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCHLQLQ*PVCLLN
Trigger: ATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTGGAGGAGACAACGGTaGCCTTTGATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVWRRQR*PLMGWM
Trigger: CATCCAACCCATCAAAGGGCACCGTTGTCTCCTCCA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATTGGATGGTCCCACTaGACCAGGCTGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIIGWSH*TRLNSI
Trigger: AATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGATGAGGCTGATTCTTaGTTTGGCGAGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTDEADS*FGEVGM
Trigger: CATTCCCACCTCGCCAAAGCAAGAATCAGCCTCATC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGAGAGGAGACTTTGCTaGTGCTTCCCAAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVERRLC*CFPRSW
Trigger: CCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGAGAGGAGACTTTGCTaGTGCTTCCCAAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAERRLC*CFPRSW
Trigger: CCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTC...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCACCGAGAGGAGACTTTaGTGCTGCTTCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVTERRL*CCFPRS
Trigger: ACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAGACTGAGGGGAATATaGTGTACTTACATGTCCATG +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTRLRGI*CTYMSM
Trigger: CATGGACATGTAAGTACAGCATATTCCCCTCAGTCT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCGGGACCACTTCTTTaGTTCTCAGCTAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSGPLL*FSARGT
Trigger: AGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTCAGGCCATCGGTCTaGGCAGCATCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLRPSV*AASCSL
Trigger: CAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTCAGGCCATCGGTCTaGGCAGCATCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLRPSV*AASCSL
Trigger: CAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCTGATTCACAGACCCTaGGAAGGGTTTGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLIHRP*EGFGRS
Trigger: AGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACAAGAGTTCAGGATTTaGGCTTACTTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTQEFRI*AYFGLF
Trigger: AAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGGAAGCTCATTGGATaGTCCCACTGCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCWKLIG*SHCTRL
Trigger: CAGCCTGGTGCAGTGGGACCATCCAATGAGCTTCCA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATCTCCCACTCATTCCTaGAAGCTCATTGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGISPTHS*KLIGWS
Trigger: GGACCATCCAATGAGCTTCCAGGAATGAGTGGGAGA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGGCACATATAGCCCCTaGTGGGCAGACAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFGTYSP*WADRES
Trigger: GCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTGTCCTGACTGGGATTaGCACCGTGACACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTCPDWD*HRDTLR
Trigger: TCTTAGAGTGTCACGGTGCCAATCCCAGTCAGGACA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGAGGAATCTTTGAGGTaGGAAGGGTTTGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIEESLR*EGFAAS
Trigger: TGAGGCAGCAAACCCTTCCCACCTCAAAGATTCCTC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGTTTGAAAGGCAGCTaGAATATTAAGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGLKGS*NIKFLP
Trigger: AGGGAGGAACTTAATATTCCAGCTGCCTTTCAAACC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGACAATCCTGTCATGTaGCAAGTTAGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVDNPVM*QVRVWV
Trigger: GACCCAGACCCTAACTTGTCACATGACAGGATTGTC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGCTTTCACTCCTCCTaGGCCGTGCATGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGFHSS*AVHAAL
Trigger: GAGCGCGGCATGCACGGCTCAGGAGGAGTGAAAGCC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTTTGGGCTGTGATCTaGTCCATTCTCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVFWAVI*SILSLL
Trigger: GAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGGCCTGCACCGTGTCTaGATCGACCACATACTTCTC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFGLHRV*IDHILL
Trigger: GAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGGAGGGCTGTGCAGCTaGTGGCTGAGACTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSGGLCS*WLRLES
Trigger: GCTCTCAAGTCTCAGCCATCAGCTGCACAGCCCTCC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTKDALS*YGWCFM
Trigger: CATGAAGCACCAACCGTATCAGCTCAATGCATCCTT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGGTACCGAGTACACTaGCGAAGCCTGCACATTCGT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCWYRVH*RSLHIR
Trigger: ACGAATGTGCAGGCTTCGTCAGTGTACTCGGTACCA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR TCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGAGCAGGTGTTTGATCTaGTTATTTGATGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKESRCLI*LFDGHA
Trigger: AGCATGCCCATCAAATAATCAGATCAAACACCTGCT...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCAAGGTAACCTTGCCTaGATTATCCTGGTCCATCGA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTQGNLA*IILVHR
Trigger: TCGATGGACCAGGATAATTCAGGCAAGGTTACCTTG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLYGPR*DLCCQC
Trigger: GCACTGGCAGCATAGGTCTCATCTTGGACCATACAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTGTAGTCTGAAATACTaGAAACTTGTGACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSCSLKY*KLVTPS
Trigger: TGAGGGAGTCACAAGTTTTCAGTATTTCAGACTACA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTTTTACCTGTGACCTaGGTCTTCTTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLLPVT*VFLQSG
Trigger: CCCTGATTGCAAGAAGACTCAGGTCACAGGTAAAAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGAAGCGGTAGGTGTTTaGGGCGTGTGGTCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTEAVGV*GVWSSA
Trigger: TGCACTAGACCACACGCCTCAAACACCTACCGCTTC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAACTCTGGTAATATGTaGTGCTGGTTGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTNSGNM*CWLAGS
Trigger: GCTTCCAGCCAACCAGCATCACATATTACCAGAGTT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATCAGCTTCGGGCGCCTaGCGAGGACGCAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKSASGA*RGRKTG
Trigger: CCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGGTGCGGTAGAGGATaGGCACTCAGCTTCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGCGRG*ALSFGR
Trigger: GCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGTGAAAGGGACAGTTaGAGCTCAACCACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCCERDS*SSTTGP
Trigger: TGGGCCTGTGGTTGAGCTGCAACTGTCCCTTTCACA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTGCTCACAGAGCTCTaGGTTCTTACCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLLTEL*VLTDSS
Trigger: GGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPRCSF*SQSSAF
Trigger: GAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTCCAGTGCCCCGTTTaGCTTCTGAATTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLQCPV*LLNFEG
Trigger: TCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACACCTCCAGCTCCAGTaGCCCGTTTGCCTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTHLQLQ*PVCLLN
Trigger: ATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGGAGGAGACAACGGTaGCCTTTGATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCWRRQR*PLMGWM
Trigger: CATCCAACCCATCAAAGGGCACCGTTGTCTCCTCCA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCGAGCAGCGTGGGCCTaGACCGTGTCTGAATCGACC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRAAWA*TVSEST
Trigger: GGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGGGAGGCCATCCTTTaGATCTGGAGGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGEAIL*IWRLES
Trigger: ACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTACACTGACGAAGCCTaGACATTCGTAGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVYTDEA*TFVGEA
Trigger: TGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGATGAGGCTGATTCTTaGTTTGGCGAGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVDEADS*FGEVGM
Trigger: CATTCCCACCTCGCCAAAGCAAGAATCAGCCTCATC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGAGAGGAGACTTTGCTaGTGCTTCCCAAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCERRLC*CFPRSW
Trigger: CCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTTGACAGACCAGAGCTaGTCCCTGTCCTTCATAGAT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLTDQS*SLSFID
Trigger: ATCTATGAAGGACAGGGAGCAGCTCTGGTCTGTCAA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGGGAATTTATTAGCCTaGTTTGTGGCCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIGNLLA*FVALGQ
Trigger: TTGGCCAAGGGCCACAAAGCAGGCTAATAAATTCCC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGAGGTGGGAAGGGTTTaGTGCCTCATGCACTTGACT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVEVGRV*CLMHLT
Trigger: AGTCAAGTGCATGAGGCAGCAAACCCTTCCCACCTC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAACGATATGGGCTCACTaGAACCTCTGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTTIWAH*NLCSPG
Trigger: ACCTGGGGAGCAGAGGTTGCAGTGAGCCCATATCGT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCCGAGGACGCAAGACTaGGTAATGCAGAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSPRTQD*VMQSVR
Trigger: GCGGACGCTCTGCATTACCCAGTCTTGCGTCCTCGG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGTCGAATCTGCAGGGTaGTACTTTCCACATAACCCC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVVESAG*YFPHNP
Trigger: GGGGTTATGTGGAAAGTACCACCCTGCAGATTCGAC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAAGAATTCTGTGCACTaGGTCTTTGTGGCCGGTCGA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVKNSVH*VFVAGR
Trigger: TCGACCGGCCACAAAGACCCAGTGCACAGAATTCTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCTTGGAGTTGGGGTTaGGAGCATCCGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPWSWG*EHPLEE
Trigger: TTCTTCTAACGGATGCTCCCAACCCCAACTCCAAGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTATGGGGACCATCCTCTaGATGTTTGCTGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTMGTIL*MFAVSD
Trigger: ATCTGAGACAGCAAACATCCAGAGGATGGTCCCCAT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGATTCACAGACCCTaGGAAGGGTTTGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLIHRP*EGFGRS
Trigger: AGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGGCAGGAGGTTGGGTaGGAGCCACTCCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRQEVG*EPLLET
Trigger: GGTCTCCAGGAGTGGCTCCCACCCAACCTCCTGCCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGGGAAGGCAGGAGGTTaGGTGGGAGCCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLGKAGG*VGATPG
Trigger: TCCAGGAGTGGCTCCCACCCAACCTCCTGCCTTCCC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGGAAGGCAGGAGGTTaGGTGGGAGCCACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGKAGG*VGATPG
Trigger: TCCAGGAGTGGCTCCCACCCAACCTCCTGCCTTCCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTGTGTAATTCTGACTaGCTACTGCTGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVCNSD*LLLLVV
Trigger: GACCACAAGCAGCAGTAGCCAGTCAGAATTACACAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTNSIDC*CGNCWF
Trigger: AAACCAACAGTTTCCACACCAACAGTCAATGCTGTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATGGAAGCTCATTGGATaGTCCCACTGCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTWKLIG*SHCTRL
Trigger: CAGCCTGGTGCAGTGGGACCATCCAATGAGCTTCCA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTCCTGGAAGCTCATTaGATGGTCCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCFLEAH*MVPLHQ
Trigger: CTGGTGCAGTGGGACCATCCAATGAGCTTCCAGGAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGAGGTGCTCGGACATTaGAGGAGTACTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVEVLGH*RSTSNW
Trigger: CCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTTTTCTTGCCCATTTTaGAGGGCTGTGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTFSCPF*RAVQLM
Trigger: CATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLTDDF*GRPSFA
Trigger: TGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGTGGATGTTTCTGGGTTaGAAAGCATCATCCACTAGA +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKEWMFLG*KASSTR
Trigger: TCTAGTGGATGATGCTTTCCAACCCAGAAACATCCA...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTCATTCCAATCCTCTaGAGGCCCTGGAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVFIPIL*RPWKHL
Trigger: AAGGTGCTTCCAGGGCCTCCAGAGGATTGGAATGAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGCGTCTCCATCCCCTTaGGTGTGGGTTGTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCASPSP*VWVVVV
Trigger: TACAACTACAACCCACACCCAAGGGGATGGAGACGC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGCCAAGTAATGCTCTATaGATCAGCCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKEPSNAL*ISQQGS
Trigger: ACTTCCTTGTTGGCTGATCCATAGAGCATTACTTGG...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCATTGCACTCCAGACTaGGTGGGACAGAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCHCTPD*VGQSKT
Trigger: AGTCTTGCTCTGTCCCACCCAGTCTGGAGTGCAATG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCAGTCTCCACACACATaGGGTTCCTCGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVQSPHT*GSSCFT
Trigger: TGTGAAGCACGAGGAACCCCATGTGTGTGGAGACTG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGTCGAATATTTTCCATaGTTGGTCAGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTVEYFP*LVRLRL
Trigger: AAGTCTGAGTCTGACCAACCATGGAAAATATTCGAC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTGCTTTGTGGCCCTTaGCCAACCCTGGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLLCGP*PTLVGH
Trigger: ATGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTTTGCTGCCATCTCCTaGACGTTTGAAATAAAATCG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSFAAIS*TFEIKS
Trigger: CGATTTTATTTCAAACGTCCAGGAGATGGCAGCAAA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTGCAGCAGTACGATATaGGCTCACTGCAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVCSSTI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCCATATCGTACTGCTGCA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCACAAGGGTTGCCATTaGTGGAAACCACTTCATCTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHKGCH*WKPLHL
Trigger: GAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCTTTCACTCCTCCTaGGCCGTGCATGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGFHSS*AVHAAL
Trigger: GAGCGCGGCATGCACGGCTCAGGAGGAGTGAAAGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSQMSH*SHSVGE
Trigger: TTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVSQMSH*SHSVGE
Trigger: TTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCTCTGCCCCCAAGCTaGGGTAGTCTTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPLPPS*GSLLPV
Trigger: GACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCTCTGCCCCCAAGCTaGGGTAGTCTTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVPLPPS*GSLLPV
Trigger: GACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGAGGAGCTTTGCATaGAATTACAAGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQRSFA*NYKPLP
Trigger: GGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTACTGGTTGGGAGGATaGGGACTTGACTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCYWLGG*GLDCRF
Trigger: AAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGGCTGAACAGCATTaGCTGTTGGTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQAEQH*LLVWKL
Trigger: CAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVDGVGD*ARAAWA
Trigger: GGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGGAGGGCTGTGCAGCTaGTGGCTGAGACTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNGGLCS*WLRLES
Trigger: GCTCTCAAGTCTCAGCCATCAGCTGCACAGCCCTCC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVKDALS*YGWCFM
Trigger: CATGAAGCACCAACCGTATCAGCTCAATGCATCCTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACCACTTTTCTTGGCTaGGAACTTTGGCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTTFLG*ELWPWC
Trigger: GCACCAAGGCCAAAGTTCTCAGCCAAGAAAAGTGGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCACTCTCCTGAATTGTaGCACCACTTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHSPEL*HHFSWL
Trigger: CAGCCAAGAAAAGTGGTGTCACAATTCAGGAGAGTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR TCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTTCCAATCTTCTCATTTaGCAGATGGGGACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAASNLLI*QMGTPE
Trigger: TTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGA...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR TCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAATAAAGGCTGATTCCTaGTGTTTGATATCACTGATC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTIKADS*CLISLI
Trigger: GATCAGTGATATCAAACATCAGGAATCAGCCTTTAT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCAAATAGTCCTAGGATaGCCAGAAGGCATAGTCATG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTQIVLG*PEGIVM
Trigger: CATGACTATGCCTTCTGGTCATCCTAGGACTATTTG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCAAGGGCCTTTATTTaGGAAATTAAATCTAAACGC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPRAFI*EIKSKR
Trigger: GCGTTTAGATTTAATTTCTCAAATAAAGGCCCTTGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATATAACTGGATGAAATaGTACGCAGCCAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIYNWMK*YAAKGL
Trigger: AAGGCCCTTGGCTGCGTATCATTTCATCCAGTTATA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTTGTTGCATGGCCTTaGTTATTGCACCAAATAAAA +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVVAWP*LLHQIK
Trigger: TTTTATTTGGTGCAATAATCAAGGCCATGCAACAAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCCACTCATGTCATCCTaGCTTGAACCAAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTPLMSS*LEPKCL
Trigger: CAAGCATTTTGGTTCAAGTCAGGATGACATGAGTGG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCCACTGAGGAATCTTTaGGGTGGGAAGGGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFPLRNL*GGKGLL
Trigger: CAGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTGCTCCTTGCCACCTTaGAATCTGAACCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSCSLPP*NLNPQG
Trigger: GCCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTTCTTCTTTCAAGCTaGCTGCACAGTCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCFLLSS*LHSRDH
Trigger: GTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCTCAGGAAAGGGTCTaGTTTCTCATTAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPQERV*FLISRD
Trigger: ATCCCTACTAATGAGAAAGCAGACCCTTTCCTGAGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACTCCTCCTGAGCCGTaGATGCCGCGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTPPEP*MPRSVL
Trigger: AAGCACCGAGCGCGGCATGCACGGCTCAGGAGGAGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGCATCTTGTTCTCTaGTTGGCGTTCCACCTACCT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQHLVL*LAFHLP
Trigger: AGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHPLDV*CLRCPT
Trigger: AGTGGGACATCTGAGACAGCAAACATCCAGAGGATG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGAAATTACAAGCCTCTaGCCCCAAGCTGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVEITSL*PQAEVV
Trigger: GACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTGACTGGCTACTGCTaGTTGTGGTCCTTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLTGYC*LWSFEG
Trigger: CCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCTTTCCCTTTTTCTTaGCCATTTTGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSFPFS*PFWRAV
Trigger: CACAGCCCTCCAAAATGGGCAAGAAAAAGGGAAAGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTACACTGACGAAGCCTaGACATTCGTAGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCYTDEA*TFVGEA
Trigger: TGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTGGCGAGGTGGGAATaGCCACAGGCACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLARWE*PQALGM
Trigger: CATCCCCAGTGCCTGTGGGCATTCCCACCTCGCCAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGGCGAGGTGGGAATaGCCACAGGCACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLARWE*PQALGM
Trigger: CATCCCCAGTGCCTGTGGGCATTCCCACCTCGCCAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCAGGAGGCGCAGGTTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVPGGAG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAACCTGCGCCTCCTGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAAACTAAACAAAAACTaGCTCCCTACACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTKLNKN*LPTPHN
Trigger: GTTATGAGGTGTAGGGAGGCAGTTTTTGTTTAGTTT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTTCAAATGCCCTGCCTaGTGGGCCAGTTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFFKCPA*WASCDS
Trigger: TGAGTCACAACTGGCCCAGCAGGCAGGGCATTTGAA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCCTCATGCACTTGACTaGTGTCCTGACTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFPHALD*CPDWDW
Trigger: CCAATCCCAGTCAGGACAGCAGTCAAGTGCATGAGG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAGGACAGCTGTGAGCTaGGCCCTCCTAGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRTAVS*ALLGQP
Trigger: GGGCTGACCTAGGAGGGCGCAGCTCACAGCTGTCCT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATGGCATCAAACCTGTaGAGTGACCTAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFMASNL*SDLGSS
Trigger: GCTGGAGCCTAGGTCACTGCACAGGTTTGATGCCAT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGCCCCAGCCGCCTGCTaGGAATTTGTGCGGCTAATG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVAPAAC*EFVRLM
Trigger: CATTAGCCGCACAAATTCGCAGCAGGCGGCTGGGGC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCGAGGACGCAAGACTaGGTAATGCAGAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPRTQD*VMQSVR
Trigger: GCGGACGCTCTGCATTACCCAGTCTTGCGTCCTCGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGTCGAATCTGCAGGGTaGTACTTTCCACATAACCCC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVVESAG*YFPHNP
Trigger: GGGGTTATGTGGAAAGTACCACCCTGCAGATTCGAC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTAAGAATTCTGTGCACTaGGTCTTTGTGGCCGGTCGA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCKNSVH*VFVAGR
Trigger: TCGACCGGCCACAAAGACCCAGTGCACAGAATTCTT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCGGGACCACTTCTTTaGTTCTCAGCTAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSGPLL*FSARGT
Trigger: AGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTGCCACTGGAGATCTaGATTATCTTGCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLPLEI*IILLDL
Trigger: GAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGCCACTGGAGATCTaGATTATCTTGCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLPLEI*IILLDL
Trigger: GAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAACATCAACACCCCCTTaGAGTTGGGGTTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTTSTPP*SWGWEH
Trigger: ATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCATCTTGTTCTCTGCTTaGCGTTCCACCTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVILFSA*RSTYLV
Trigger: GACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGAT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGGAAAGTCAGCAATaGGACTCGTCATGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQESQQ*DSSCFG
Trigger: CCCGAAACATGACGAGTCCCATTGCTGACTTTCCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCGAATCGTAAAAGGCTaGCTGGGACCACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRIVKG*LGPRGR
Trigger: CCTGCCCCGTGGTCCCAGCCAGCCTTTTACGATTCG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCGTGCTTCTCCTTTTaGCCTCCTGCAATATTCCTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSCFSF*PPAIFL
Trigger: CAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTCCTGGAGACCAGACTaGGGAAACTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFSWRPD*GNWSYW
Trigger: CCAGTAACTCCAGTTTCCCCAGTCTGGTCTCCAGGA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGTGGGAGCCACTCCTaGAGACCAGACTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGGSHS*RPDWGN
Trigger: GTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCCCACC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCTCCCACTCATTCCTaGAAGCTCATTGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSPTHS*KLIGWS
Trigger: GGACCATCCAATGAGCTTCCAGGAATGAGTGGGAGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTCTCCCACTCATTCCTaGAAGCTCATTGGATGGTCC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVSPTHS*KLIGWS
Trigger: GGACCATCCAATGAGCTTCCAGGAATGAGTGGGAGA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTACTGGCCGGGAGAGATaGAGTGGGAGACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVTGRER*SGRLSS
Trigger: CGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATCCTCTGGAGGCCCTaGAAGCACCTTCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNILWRP*KHLPPS
Trigger: GCTCGGAGGAAGGTGCTTCCAGGGCCTCCAGAGGAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGAAAGTAATTGCTCACTaGCATGCCCCTATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKEKVIAH*HAPMRN
Trigger: ATTTCTCATAGGGGCATGCCAGTGAGCAATTACTTT...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTCAAGATAAGGCCTTaGTCACTTGCACCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVFKIRP*SLAPWH
Trigger: ATGCCAGGGTGCAAGTGACCAAGGCCTTATCTTGAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTTTCAAGATAAGGCCTTaGTCACTTGCACCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAFKIRP*SLAPWH
Trigger: ATGCCAGGGTGCAAGTGACCAAGGCCTTATCTTGAA...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACAGGTCCCAATCATGTaGTTTCTCCAGGTGAAACAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIQVPIM*FLQVKQ
Trigger: TTGTTTCACCTGGAGAAACCACATGATTGGGACCTG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCTTACTCCAGGGAGCTaGTTAGTCCTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFLTPGS*LVLLPP
Trigger: GGGAGGAAGAAGGACTAACCAGCTCCCTGGAGTAAG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCCTTAAGTTATTATTaGTTTAGTAGCAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTALSYY*FSSKPC
Trigger: GCATGGCTTGCTACTAAACCAATAATAACTTAAGGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAAAAAGTGCTTAGAGTaGTACCTAGCACATCTTAAG +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSKKCLE*YLAHLK
Trigger: CTTAAGATGTGCTAGGTACCACTCTAAGCACTTTTT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCCTCCCTATGTCAGTaGCTCAGCTTCTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSSLCQ*LSFLEL
Trigger: CAATTCTAAGAAGCTGAGCCACTGACATAGGGAGGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAGCATCAGAATCACCTaGGTTGTATGTTACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSIRIT*VVCYKN
Trigger: GTTTTTGTAACATACAACCCAGGTGATTCTGATGCT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCAGAGGCTTTGCTCTaGTTTCGAATCTTTGCAACT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPEALL*FRIFAT
Trigger: AGTTGCAAAGATTCGAAATCAGAGCAAAGCCTCTGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCACTCCTTTCCTGCCTaGAGCCTGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNHSFPA*SLHPSV
Trigger: GACAGAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCACTCCTTTCCTGCCTaGAGCCTGCACCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLHSFPA*SLHPSV
Trigger: GACAGAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTCCTCTTGGCAAACATaGGGGCTCCCTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLSSWQT*GLPCLW
Trigger: CCACAGGCAAGGGAGCCCTCATGTTTGCCAAGAGGA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTTCTTTTTGGGCTGTaGTCTGATCCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLLFGL*SDPFSP
Trigger: GGGAGAGAATGGATCAGATCACAGCCCAAAAAGAAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTTCTTTTTGGGCTGTaGTCTGATCCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLLFGL*SDPFSP
Trigger: GGGAGAGAATGGATCAGATCACAGCCCAAAAAGAAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAAGGGGGTAGCTGGCTaGTTCACAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVKGVAG*FTDPGK
Trigger: CTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGCCAGCAATCGGACTTaGAACCCCTCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVASNRT*NPSGEG
Trigger: GCCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGACAACGGTGCCCTTTaGTGGGTTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSDNGAL*WVGCGE
Trigger: TTCCCCACATCCAACCCATCAAAGGGCACCGTTGTC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCCCACTGCACCAGGCTaGACAGCATTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSPTAPG*TALTVG
Trigger: ACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGCACATTCGTAGGTaGGGCAGCATTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLHIRR*GSIHWP
Trigger: CGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGGCGCAGGTTGCAGTaGGCCAAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRRRLQ*AKIAPL
Trigger: CAATGGTGCGATCTTGGCTCACTGCAACCTGCGCCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCCAATCTTCTCATTTaGCAGATGGGGACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSNLLI*QMGTPE
Trigger: TTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTGCATATACATACTTaGGCCCTAATAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLHIHT*ALIGWP
Trigger: GGGCCAACCTATTAGGGCTCAAGTATGTATATGCAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTCCACACCTGAATTGTaGCACCACTTTTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVSTPEL*HHFSWL
Trigger: CAGCCAAGAAAAGTGGTGTCACAATTCAGGTGTGGA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATCAGGAAGAGAGGTTTaGCACATGATTAAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGISGREV*HMIKGK
Trigger: TTTCCCCTTAATCATGTGTCAAACCTCTCTTCCTGA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFALLED*GEYAVL
Trigger: AAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTCTTAGCAGCCGAATaGCCTTCAAAGTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILLAAE*PSKFFN
Trigger: GTTAAAGAACTTTGAAGGTCATTCGGCTGCTAAGAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCCCAGAATAATTGTTaGCTAACTCGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSQNNC*LTRQHQ
Trigger: TTGGTGTTGCCGAGTTAGTCAACAATTATTCTGGGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTATGAGATTATTTGAATaGCTGCCACAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTMRLFE*LPQLLS
Trigger: GGACAGAAGCTGTGGCAGTCATTCAAATAATCTCAT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATTCAGGCTGCAGACTaGATCCAGGGGCCATTACTT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFIQAAD*IQGPLL
Trigger: AAGTAATGGCCCCTGGATTCAGTCTGCAGCCTGAAT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTACAGTAGGCTCTTGGTaGATCAGTTTGGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTTVGSW*ISLGNS
Trigger: TGAATTTCCCAAACTGATTCACCAAGAGCCTACTGT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAAACCAGCAAAATGTTaGGCTTCCCTTCGCCATTAT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTKPAKC*ASLRHY
Trigger: ATAATGGCGAAGGGAAGCTCAACATTTTGCTGGTTT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCAACTGTTGCAGGTCTaGAGTGGGGTAGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSQLLQV*SGVVSG
Trigger: CCCTGAGACTACCCCACTTCAGACCTGCAACAGTTG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAAGTCTGGCTGTCCCTaGCTGGATAAACAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVKSGCP*LDKQEN
Trigger: GTTTTCCTGTTTATCCAGTCAGGGACAGCCAGACTT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCAGACGAAGCTTGGGTaGGGTAGAGGATGCGCACTC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLQTKLG*GRGCAL
Trigger: GAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCAGACGAAGCTTGGGTaGGGTAGAGGATGCGCACTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVQTKLG*GRGCAL
Trigger: GAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTGCTCCTTGCCACCTTaGAATCTGAACCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVCSLPP*NLNPQG
Trigger: GCCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACTCCTCCTGAGCCGTaGATGCCGCGCTCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTPPEP*MPRSVL
Trigger: AAGCACCGAGCGCGGCATGCACGGCTCAGGAGGAGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGCTTGCACCAAGAAATaGTACTTCACATGTATCCTC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIACTKK*YFTCIL
Trigger: GAGGATACATGTGAAGTAGCATTTCTTGGTGCAAGC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCAGCATCTTGTTCTCTaGTTGGCGTTCCACCTACCT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFQHLVL*LAFHLP
Trigger: AGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGAGTAAGGTGGAGGTaGAGGAAAGTCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRVRWR*RKVSNG
Trigger: CCCATTGCTGACTTTCCTGCACCTCCACCTTACTCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGGGGGAGGAGTGACTaGAGAGTAAGGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRGRSD*RVRWRC
Trigger: GCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGGGGGAGGAGTGACTaGAGAGTAAGGTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRGRSD*RVRWRC
Trigger: GCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTACATGGGTTTTGTCGTaGTTCTCCTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVTWVLS*FSFWPP
Trigger: AGGAGGCCAAAAGGAGAAGCACGACAAAACCCATGT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTCCAGTGCCCCGTTTaGCTTCTGAATTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLQCPV*LLNFEG
Trigger: TCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCTTTCCCTTTTTCTTaGCCATTTTGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSFPFS*PFWRAV
Trigger: CACAGCCCTCCAAAATGGGCAAGAAAAAGGGAAAGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRGGRA*FMARAE
Trigger: TTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRGGRA*FMARAE
Trigger: TTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCTTTATGTGCGTCCTaGCTTTTACATGTTACTTCG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPLCAS*LLHVTS
Trigger: CGAAGTAACATGTAAAAGGCAGGACGCACATAAAGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGATGCTTTTACTGCATaGCTGACATGCCTCTTACAA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTDAFTA*LTCLLQ
Trigger: TTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCTGTATACTTGGGATaGACTTTATTGGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPVYLG*TLLAGK
Trigger: TTTGCCAGCCAATAAAGTGCATCCCAAGTATACAGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGATAGGGTTGCCAACTaGTCCACTTTCAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTDRVAN*STFSVI
Trigger: TATTACACTGAAAGTGGAGCAGTTGGCAACCCTATC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGCACTGGGTCTTTGTaGCCGGTCGAATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNCTGSL*PVESAG
Trigger: CCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGCCACGCGTCCTCTTTaGGAGTCAGGCATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNATRPL*ESGIWG
Trigger: TCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGCCACGCGTCCTCTTTaGGAGTCAGGCATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLATRPL*ESGIWG
Trigger: TCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGCCACGCGTCCTCTTTaGGAGTCAGGCATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVATRPL*ESGIWG
Trigger: TCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTCTGGATTATCTTGCTaGACCTCAGGAAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVSGLSC*TSGKGL
Trigger: CAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCTGGATTATCTTGCTaGACCTCAGGAAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSGLSC*TSGKGL
Trigger: CAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCAACTCTCTGCCACTaGAGATCTGGATTATCTTGC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSTLCH*RSGLSC
Trigger: GCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCTGCTTCACTTTCCTaGATCACTCTCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPASLS*ITLNSL
Trigger: CAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTATCTTTTTCCGAGCGTaGATCTTCTCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVIFFRA*IFSLLC
Trigger: ACAGAGCAGGGAGAAGATCCACGCTCGGAAAAAGAT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTGAAGCCATTCTGTTaGGGAACATGGCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLKPFC*GTWPRP
Trigger: TGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATGGCCGTTCTATTCATaGGGACCATCCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTWPFYS*GPSSGC
Trigger: ACATCCAGAGGATGGTCCCCATGAATAGAACGGCCA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTGGCCGTTCTATTCATaGGGACCATCCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFWPFYS*GPSSGC
Trigger: ACATCCAGAGGATGGTCCCCATGAATAGAACGGCCA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCGAGAAGGGGGTAGCTaGCTGATTCACAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLREGGS*LIHRPW
Trigger: CCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCGAGAAGGGGGTAGCTaGCTGATTCACAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVREGGS*LIHRPW
Trigger: CCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCGTCATGTTTCGGGTTaGCGAGAAGGGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRHVSG*REGGSW
Trigger: CCAGCTACCCCCTTCTCGCCAACCCGAAACATGACG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGGCAGGAGGTTGGGTaGGAGCCACTCCTGGAGACC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRQEVG*EPLLET
Trigger: GGTCTCCAGGAGTGGCTCCCACCCAACCTCCTGCCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTGCTTTGGCGAGGTaGGAATGCCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLALAR*ECPQAL
Trigger: CAGTGCCTGTGGGCATTCCCACCTCGCCAAAGCAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTGCTTTGGCGAGGTaGGAATGCCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLALAR*ECPQAL
Trigger: CAGTGCCTGTGGGCATTCCCACCTCGCCAAAGCAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTGCTTCCCAAGGAGTTaGTCTCTTGTTTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVCFPRS*SLVCFL
Trigger: GAGAAAGCAAACAAGAGACCAACTCCTTGGGAAGCA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAGGGAGGCTGACGTCTaGAGGTCTAACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSREADV*RSNSPF
Trigger: GAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTATATGTGATGCTGGTTaGCTGGAAGCGGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVICDAG*LEAVGV
Trigger: AACACCTACCGCTTCCAGCCAACCAGCATCACATAT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTGTCCTAGGACAGTGTaGAAAGGAGGGATAAGGACA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVCPRTV*KGGIRT
Trigger: TGTCCTTATCCCTCCTTTCCACACTGTCCTAGGACA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTGGCTGTCCCTGACTaGATAAACAGGAAAACTATT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLAVPD*INRKTI
Trigger: AATAGTTTTCCTGTTTATCCAGTCAGGGACAGCCAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACCCTGCCGGGTACCTaGGATTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTLPGT*DYRHVP
Trigger: TGGCACATGCCTGTAATCCCAGGTACCCGGCAGGGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp GGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTaGGGATGCACTTTATTGGCTGGCAAACCTTTGATA +
Preference number: 4 (lower is better)
Translates to: GPCRSLAFSPVY*GCTLLAGKPLI
Trigger: TATCAAAGGTTTGCCAGCCAATAAAGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTTCACTTGTTTTTCTaGCAGGCTTTCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLHLFF*QAFTPP
Trigger: AGGAGGAGTGAAAGCCTGTCAGAAAAACAAGTGAAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCGTCAGGGGGAGGAGTaGCTGCAGAGTAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRQGEE*LQSKVE
Trigger: CTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGCCAGCAATCGGACTTaGAACCCCTCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKASNRT*NPSGEG
Trigger: GCCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGACAACGGTGCCCTTTaGTGGGTTGGATGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVDNGAL*WVGCGE
Trigger: TTCCCCACATCCAACCCATCAAAGGGCACCGTTGTC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGCTTGTGGTCCTTTaGAGGGACCAGCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLLVVL*RDQPRS
Trigger: TGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCCACTGCACCAGGCTaGACAGCATTGACTGTTGGT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVPTAPG*TALTVG
Trigger: ACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCTTTTAGCAAAGAGCTaGGCTCCTCTCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFLLAKS*APLPLI
Trigger: AATGAGTGGGAGAGGAGCTCAGCTCTTTGCTAAAAG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGCCTGCACCGTGTCTaGATCGACCACATACTTCTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGLHRV*IDHILL
Trigger: GAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTGATGGCTGAGACTTaGGAGCAGCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLMAET*EQPVGK
Trigger: CTTACCCACTGGCTGCTCTCAAGTCTCAGCCATCAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGAGGGCTGTGCAGCTaGTGGCTGAGACTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGGLCS*WLRLES
Trigger: GCTCTCAAGTCTCAGCCATCAGCTGCACAGCCCTCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCACTGGCATGCCCCTATaGGAAATTTCTGCAATGTTA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVTGMPL*EISAML
Trigger: TAACATTGCAGAAATTTCTCATAGGGGCATGCCAGT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGATGGTTTCCACACCTaGATTGTGACACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVDGFHT*IVTPLF
Trigger: GAAAAGTGGTGTCACAATTCAGGTGTGGAAACCATC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCCATTGTTCTGCAGCTaGCTTAATTCTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTPLFCS*LNSPLY
Trigger: ATAAAGAGGAGAATTAAGTCAGCTGCAGAACAATGG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTCCTTGGCCCCAACCTaGAAGGTGGCACATATAGCC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLSLAPT*KVAHIA
Trigger: GGCTATATGTGCCACCTTTCAGGTTGGGGCCAAGGA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGAGAGGTTTGACACATaGTTAAGGGGAAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVERFDT*LRGNLW
Trigger: CCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTGTAGTCTGAAATACTaGAAACTTGTGACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTCSLKY*KLVTPS
Trigger: TGAGGGAGTCACAAGTTTTCAGTATTTCAGACTACA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTGGGATTGGCACCGTaGCACTCTAAGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLGLAP*HSKIPG
Trigger: CCCTGGAATCTTAGAGTGTCACGGTGCCAATCCCAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAATGGACAAACAGGCTaGATACAGAGGAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGINGQTG*IQRNVN
Trigger: GTTTACATTCCTCTGTATTCAGCCTGTTTGTCCATT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAAAAGGCCAGGTTGCTaGCCCTTTGTCCTAGGACAG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSKRPGC*PFVLGQ
Trigger: CTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAAAATTCCCTGGGTTTaGAAGGCAGCTGGAATATTA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIKIPWV*KAAGIL
Trigger: TAATATTCCAGCTGCCTTTCAAACCCAGGGAATTTT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCATATTGGACTTACGTaGAGAATTATGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTHIGLT*RIMICT
Trigger: GGTGCAGATCATAATTCTTCACGTAAGTCCAATATG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTACCCACAATGAGTTGTaGCATTTCAGTGAGTATTTC +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTTHNEL*HFSEYF
Trigger: GAAATACTCACTGAAATGTCACAACTCATTGTGGGT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCAGACCCAGAGGCTTTaGTCTGATTTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCQTQRL*SDFESL
Trigger: CAAAGATTCGAAATCAGAGCAAAGCCTCTGGGTCTG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGGGTAGGTGAGATCTaGACAAGGGTTGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRVGEI*TRVAID
Trigger: ATCAATGGCAACCCTTGTGCAGATCTCACCTACCCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGTGGCCGGTCGAATCTaGAGGGTGGTACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVVAGRI*RVVLST
Trigger: TGTGGAAAGTACCACCCTGCAGATTCGACCGGCCAC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGTGGCCGGTCGAATCTaGAGGGTGGTACTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLVAGRI*RVVLST
Trigger: TGTGGAAAGTACCACCCTGCAGATTCGACCGGCCAC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCACCCTTCTGTCTTCTaGCTGTCAGAGCAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVHPSVF*LSEQSR
Trigger: CCTCGACTGCTCTGACAGGCAGAAGACAGAAGGGTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCACACACTCCTTTCCTaGCTGAAGCCTGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNHTLLS*LKPAPF
Trigger: GAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTGTGTG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGGAGGTGCTTCTGACTaGCCTCCTTCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNGGASD*PPSTGE
Trigger: TTCTCCAGTGGAAGGAGGGCAGTCAGAAGCACCTCC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGAGGTGCTTCTGACTaGCCTCCTTCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGGASD*PPSTGE
Trigger: TTCTCCAGTGGAAGGAGGGCAGTCAGAAGCACCTCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFHPLDV*CLRCPT
Trigger: AGTGGGACATCTGAGACAGCAAACATCCAGAGGATG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVHVQST*RPGRRV
Trigger: TACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCILTGY*CLWSFE
Trigger: TTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAAT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVILTGY*CLWSFE
Trigger: TTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAAT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRGGRA*FMARAE
Trigger: TTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTTGGCGAGGTGGGAATaGCCACAGGCACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLARWE*PQALGM
Trigger: CATCCCCAGTGCCTGTGGGCATTCCCACCTCGCCAA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAATTGCTCACTGGCATaGCCCTATGAGAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVNCSLA*PYEKFL
Trigger: CAGAAATTTCTCATAGGGGCATGCCAGTGAGCAATT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTAAGGCCTTGGTCACTTaGACCCTGGCATTATTTTTA +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAKALVT*TLALFL
Trigger: TAAAAATAATGCCAGGGTGCAAGTGACCAAGGCCTT...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR GCA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGATTCATTTTCAAGTATaGTGGAGAATACCCACAGTA +
Preference number: 4 (lower is better)
Translates to: GKHHPLDREETLLLLPKEIHFQV*WRIPTV
Trigger: TACTGTGGGTATTCTCCAGCATACTTGAAAATGAAT...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTATGTACACCTTTATGTaGGTCCTGCCTTTTACATGT +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTMYTFM*VLPFTC
Trigger: ACATGTAAAAGGCAGGACGCACATAAAGGTGTACAT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGACCATGACTTCAAATaGCCTGCCTGCTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLDHDFK*PACWAS
Trigger: ACTGGCCCAGCAGGCAGGGCATTTGAAGTCATGGTC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAGTGCTTCAGCGCCTaGCTGTTCCTTTTAGACGGG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLECFSA*LFLLDG
Trigger: CCCGTCTAAAAGGAACAGGCAGGCGCTGAAGCACTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATGCACTGGGTCTTTGTaGCCGGTCGAATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKCTGSL*PVESAG
Trigger: CCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGGATCGAATTTATGTaGACAATCCTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGIEFM*TILSCD
Trigger: GTCACATGACAGGATTGTCCACATAAATTCGATCCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTAGGGTGTATTTCCTaGCCCTCCGACGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLGCIS*PSDVAS
Trigger: AGAAGCGACGTCGGAGGGCCAGGAAATACACCCTAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTCAGGCCATCGGTCTaGGCAGCATCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLRPSV*AASCSL
Trigger: CAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCGAATCGTAAAAGGCTaGCTGGGACCACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRIVKG*LGPRGR
Trigger: CCTGCCCCGTGGTCCCAGCCAGCCTTTTACGATTCG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCAAGAGTTCAGGATTTaGGCTTACTTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVQEFRI*AYFGLF
Trigger: AAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGCTACTGCTGCTTGTaGTCCTTTGAAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGYCCL*SFEGTS
Trigger: GCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTGGAAGCTCATTGGATaGTCCCACTGCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLWKLIG*SHCTRL
Trigger: CAGCCTGGTGCAGTGGGACCATCCAATGAGCTTCCA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACTGGCCGGGAGAGATaGAGTGGGAGACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTGRER*SGRLSS
Trigger: CGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGGAGTACTTCCAACTaGCCGGGAGAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRSTSN*PGEMEW
Trigger: CCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAGGAGTACTTCCAACTaGCCGGGAGAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRSTSN*PGEMEW
Trigger: CCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGGAGTACTTCCAACTaGCCGGGAGAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRSTSN*PGEMEW
Trigger: CCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTGAGAGCAGCCAGTaGGTAAGACGGCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLESSQ*VRRRVD
Trigger: ATCCACTCGCCGTCTTACCCACTGGCTGCTCTCAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTGAGAGCAGCCAGTaGGTAAGACGGCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLESSQ*VRRRVD
Trigger: ATCCACTCGCCGTCTTACCCACTGGCTGCTCTCAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTGCTTCCCAAGGAGTTaGTCTCTTGTTTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCCFPRS*SLVCFL
Trigger: GAGAAAGCAAACAAGAGACCAACTCCTTGGGAAGCA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTATTCCTGGATGTTTCTaGGTTGGAAAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAIPGCF*VGKHHP
Trigger: TGGATGATGCTTTCCAACCCAGAAACATCCAGGAAT...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAATCAAACTTCACTCTaGCAGGTGTCTTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVNQTSL*QVSCLN
Trigger: GTTGAGACAAGACACCTGCCAGAGTGAAGTTTGATT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTAACTGGAAATACTTCTaGGTCATTACCATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTNWKYF*VITILG
Trigger: TCCTAGGATGGTAATGACCCAGAAGTATTTCCAGTT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACACCACTAGACAACTaGAAATACTTCTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITPLDN*KYFWVI
Trigger: AATGACCCAGAAGTATTTCCAGTTGTCTAGTGGTGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGCACATATAGCCCCTaGTGGGCAGACAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGTYSP*WADRES
Trigger: GCTTTCCCTGTCTGCCCACCAGGGGCTATATGTGCC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCTGACATCACTTCCTTaGCCCCAACCTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLTSLP*PQPERW
Trigger: CCACCTTTCAGGTTGGGGCCAAGGAAGTGATGTCAG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAAGATGGGGTTTCATTaGCATGACGCTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVKMGFH*HDAHRM
Trigger: CATCCTATGAGCGTCATGCCAATGAAACCCCATCTT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGGAAGAAAGGTAGGCTaGGAAGTAGGTCCTTATGAT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVGRKVG*EVGPYD
Trigger: ATCATAAGGACCTACTTCCCAGCCTACCTTTCTTCC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGACTGCTGTCCTGACTaGGATTGGCACCGTGACACT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLDCCPD*DWHRDT
Trigger: AGTGTCACGGTGCCAATCCCAGTCAGGACAGCAGTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp GTTCTTCTAACTTTCATGTTTGGCGTCTCCATCCCCTaGGGTGTGGGTTGTAGTTGTAATCAGCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: VLLTFMFGVSIP*GVGCSCNQLLE
Trigger: TTCCAGTAGCTGATTACAACTACAACCCACACCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGGGAACTTCAGTCTTaGCAGGGGCGAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVGELQS*QGRGRI
Trigger: AATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCCTCTTGGCAAACATaGGGGCTCCCTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSSWQT*GLPCLW
Trigger: CCACAGGCAAGGGAGCCCTCATGTTTGCCAAGAGGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTTTTGGGCTGTGATCTaGTCCATTCTCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSFWAVI*SILSLL
Trigger: GAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAAGGGGGTAGCTGGCTaGTTCACAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVKGVAG*FTDPGK
Trigger: CTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAAGGGGGTAGCTGGCTaGTTCACAGACCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSKGVAG*FTDPGK
Trigger: CTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAGGCTGGGCTATTTTaGTGGAGGAGACAACGGTGC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKAGLF*WRRQRC
Trigger: GCACCGTTGTCTCCTCCATCAAAATAGCCCAGCCTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTGCACATTCGTAGGTaGGGCAGCATTCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLHIRR*GSIHWP
Trigger: CGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACTACAGTTGGCACATaGTCCGTTCTTCTAACTTTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTTVGT*SVLLTF
Trigger: GAAAGTTAGAAGAACGGATCATGTGCCAACTGTAGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCAGGAGAATTGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGRRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCAATTCTCCTGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCGGGCATTCTACAAATaGGAGAATCTCAGAATATCA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRAFYK*ENLRIS
Trigger: TGATATTCTGAGATTCTCTCATTTGTAGAATGCCCG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGTATGGTCCAAGATaGGACCTATGCTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLYGPR*DLCCQC
Trigger: GCACTGGCAGCATAGGTCTCATCTTGGACCATACAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTCTTAGCAGCCGAATaGCCTTCAAAGTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLLAAE*PSKFFN
Trigger: GTTAAAGAACTTTGAAGGTCATTCGGCTGCTAAGAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTCCCCCAGAGTCCAATaGTATGTGGACCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVSPRVQ*YVDPRP
Trigger: TGGTCTTGGGTCCACATATCATTGGACTCTGGGGGA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGTCCTTATGATATCTTaGCTATGGATCCCAGATTTA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIVLMIS*LWIPDL
Trigger: TAAATCTGGGATCCATAGTCAAGATATCATAAGGAC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTTGTTGCATGGCCTTaGTTATTGCACCAAATAAAA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVVAWP*LLHQIK
Trigger: TTTTATTTGGTGCAATAATCAAGGCCATGCAACAAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGAAGCGGTAGGTGTTTaGGGCGTGTGGTCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKEAVGV*GVWSSA
Trigger: TGCACTAGACCACACGCCTCAAACACCTACCGCTTC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTAGCTATTGTTTATTaGGTGCCCCTTAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVAIVY*VPLRRI
Trigger: TATTCTTCTAAGGGGCACTCAATAAACAATAGCTAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGAAAAGGCCAGGTTGCTaGCCCTTTGTCCTAGGACAG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLKRPGC*PFVLGQ
Trigger: CTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATCTGTTTTTGGAAAGTaGTCATGCCTCTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTSVFGK*SCLSGK
Trigger: CTTGCCTGAGAGGCATGATCACTTTCCAAAAACAGA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTCTTTAGTATTCTCCTaGCTTCTCCCCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFSLVFS*LLPIPK
Trigger: CTTTGGGATGGGGAGAAGTCAGGAGAATACTAAAGA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACACACACTCCTTTCCTaGCTGAAGCCTGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKHTLLS*LKPAPF
Trigger: GAAGGGTGCAGGCTTCAGGCAGGAAAGGAGTGTGTG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLLPAL*LLMRRQ
Trigger: TTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCGTGGATCTTCTCCCTaGTCTGTGCCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRGSSP*SVPSDE
Trigger: CTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCGTGGATCTTCTCCCTaGTCTGTGCCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLRGSSP*SVPSDE
Trigger: CTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGGTGCTTGTGAGGTCTaGTGTGATCTTTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSGACEV*CDLFPS
Trigger: GCTCGGAAAAAGATCACAGCAGACCTCACAAGCACC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGCTTGCACCAAGAAATaGTACTTCACATGTATCCTC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCACTKK*YFTCIL
Trigger: GAGGATACATGTGAAGTAGCATTTCTTGGTGCAAGC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTTGCTCACAGAGCTCTaGGTTCTTACCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLLTEL*VLTDSS
Trigger: GGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTGGCAGAGGAGCTTTaGATGAAATTACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLAEEL*MKLQAS
Trigger: AGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTTTGGCAGAGGAGCTTTaGATGAAATTACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVLAEEL*MKLQAS
Trigger: AGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAA...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTGGAGGAGACAACGGTaGCCTTTGATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVWRRQR*PLMGWM
Trigger: CATCCAACCCATCAAAGGGCACCGTTGTCTCCTCCA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTGACTGGCTACTGCTaGTTGTGGTCCTTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLTGYC*LWSFEG
Trigger: CCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGGGAGGCCATCCTTTaGATCTGGAGGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGEAIL*IWRLES
Trigger: ACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGATGAGGCTGATTCTTaGTTTGGCGAGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSDEADS*FGEVGM
Trigger: CATTCCCACCTCGCCAAAGCAAGAATCAGCCTCATC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTACCGAGAGGAGACTTTaGTGCTGCTTCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVTERRL*CCFPRS
Trigger: ACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATTGATTTTGGGTTGTTaGATGGCCTTGATTATTGCA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILILGC*MALIIA
Trigger: TGCAATAATCAAGGCCATGCAACAACCCAAAATCAA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGTTAAGAATTCAGGCTaGAGACTGAATCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSVKNSG*RLNPGA
Trigger: GGCCCCTGGATTCAGTCTGCAGCCTGAATTCTTAAC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGAGTGCTTCAGCGCCTaGCTGTTCCTTTTAGACGGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKECFSA*LFLLDG
Trigger: CCCGTCTAAAAGGAACAGGCAGGCGCTGAAGCACTC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGAGGGAAGGAGAGTTTaGTGCCATCTCCTGGACGTT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVEGRRV*CHLLDV
Trigger: AACGTCCAGGAGATGGCAGCAAACTCTCCTTCCCTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTTTTGAAAACAATGTaGTTGTTAGGATCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVLKTM*LLGSKP
Trigger: CGGCTTTGATCCTAACAAGCACATTGTTTTCAAAAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACTTATTCCACTGGATaGTCTTTTGATGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITYSTG*SFDEHL
Trigger: CAAATGCTCATCAAAAGACCATCCAGTGGAATAAGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGCACTGGGTCTTTGTaGCCGGTCGAATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVCTGSL*PVESAG
Trigger: CCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGCCCTCCTTCCACTaGAGAATCCACACACTCCTT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLPSFH*RIHTLL
Trigger: AAGGAGTGTGTGGATTCTCCAGTGGAAGGAGGGCAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTGCCCTCCTTCCACTaGAGAATCCACACACTCCTT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLPSFH*RIHTLL
Trigger: AAGGAGTGTGTGGATTCTCCAGTGGAAGGAGGGCAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACACATCAACACCCCCTTaGAGTTGGGGTTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNTSTPP*SWGWEH
Trigger: ATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACACCCTGGGAAGGGTTTaGCCGTTCTATTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNTLGRV*PFYSWG
Trigger: TCCCCATGAATAGAACGGCCAAACCCTTCCCAGGGT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTGATTCACAGACCCTaGGAAGGGTTTGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLIHRP*EGFGRS
Trigger: AGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGATTCACAGACCCTaGGAAGGGTTTGGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLIHRP*EGFGRS
Trigger: AGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTCCTGGAGACCAGACTaGGGAAACTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLSWRPD*GNWSYW
Trigger: CCAGTAACTCCAGTTTCCCCAGTCTGGTCTCCAGGA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTCCTGGAAGCTCATTaGATGGTCCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFLEAH*MVPLHQ
Trigger: CTGGTGCAGTGGGACCATCCAATGAGCTTCCAGGAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGAGGTGCTCGGACATTaGAGGAGTACTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNEVLGH*RSTSNW
Trigger: CCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGAGGTGCTCGGACATTaGAGGAGTACTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVEVLGH*RSTSNW
Trigger: CCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCATATTGGGAGGTGGTaGACATATTATTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHIGRW*TYYYWL
Trigger: CAGCCAATAATAATATGTCCACCACCTCCCAATATG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAACTGTGAACCATATTaGGAGGTGGTGGACATATTA +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVNCEPY*EVVDIL
Trigger: TAATATGTCCACCACCTCCCAATATGGTTCACAGTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTAATCAAACTTCACTCTaGCAGGTGTCTTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCNQTSL*QVSCLN
Trigger: GTTGAGACAAGACACCTGCCAGAGTGAAGTTTGATT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGTGATATCAAACAGGTaGCTGAGATTGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTVISNR*LRLTDQ
Trigger: CTGGTCTGTCAATCTCAGCCACCTGTTTGATATCAC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACAGGTCCCAATCATGTaGTTTCTCCAGGTGAAACAA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTQVPIM*FLQVKQ
Trigger: TTGTTTCACCTGGAGAAACCACATGATTGGGACCTG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACTGTCCAACAGGAAATaGAAAGAAAACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGILSNRK*KENTSH
Trigger: ATGAGAAGTGTTTTCTTTCCATTTCCTGTTGGACAG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTTACTCCAGGGAGCTaGTTAGTCCTTCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLTPGS*LVLLPP
Trigger: GGGAGGAAGAAGGACTAACCAGCTCCCTGGAGTAAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTACATATAGCCCCTGGTaGGCAGACAGGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSTYSPW*ADRESK
Trigger: TTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGAAATGCCCTGCCTGCTaGGCCAGTTGTGACTCATCA +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLKCPAC*ASCDSS
Trigger: TGATGAGTCACAACTGGCCCAGCAGGCAGGGCATTT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAATGCCCTGCCTGCTaGGCCAGTTGTGACTCATCA +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKCPAC*ASCDSS
Trigger: TGATGAGTCACAACTGGCCCAGCAGGCAGGGCATTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGAGTCCAATGATATGTaGACCCAAGACCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVESNDM*TQDQRG
Trigger: CCCTCGCTGGTCTTGGGTCCACATATCATTGGACTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAAGATGGGGTTTCATTaGCATGACGCTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFKMGFH*HDAHRM
Trigger: CATCCTATGAGCGTCATGCCAATGAAACCCCATCTT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGGAAGAAAGGTAGGCTaGGAAGTAGGTCCTTATGAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTGRKVG*EVGPYD
Trigger: ATCATAAGGACCTACTTCCCAGCCTACCTTTCTTCC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTGLMRL*KPCGTV
Trigger: TACAGTACCACATGGTTTCCACAGTCTCATCAGACC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTCCTCCCTATGTCAGTaGCTCAGCTTCTTAGAATTG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFSSLCQ*LSFLEL
Trigger: CAATTCTAAGAAGCTGAGCCACTGACATAGGGAGGA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTGCAGCAGTACGATATaGGCTCACTGCAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVCSSTI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCCATATCGTACTGCTGCA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp TTTGATGGGCATGCTAACAAGGCATGTGTCATGGGATaGATGAAGCAGCTGCTTAACTTCCTCAGAACATTC +
Preference number: 4 (lower is better)
Translates to: FDGHANKACVMG*MKQLLNFLRTF
Trigger: GAATGTTCTGAGGAAGTTAAGCAGCTGCTTCATCAATCCCATGACACATGCCTTGTTAGCATGCCCATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTATGTCTCTCCTGTaGAAGGGACAGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLMSLL*KGQLQL
Trigger: GAGCTGCAACTGTCCCTTTCACAGGAGAGACATAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGACAATCCTGTCATGTaGCAAGTTAGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNDNPVM*QVRVWV
Trigger: GACCCAGACCCTAACTTGTCACATGACAGGATTGTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTTTGGGCTGTGATCTaGTCCATTCTCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLFWAVI*SILSLL
Trigger: GAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSQMSH*SHSVGE
Trigger: TTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCAGAGGAGCTTTGCATaGAATTACAAGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNQRSFA*NYKPLP
Trigger: GGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCAGAGGAGCTTTGCATaGAATTACAAGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLQRSFA*NYKPLP
Trigger: GGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTACTGGTTGGGAGGATaGGGACTTGACTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVYWLGG*GLDCRF
Trigger: AAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTGCTTGTGGTCCTTTaGAGGGACCAGCCACGTTCA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLLVVL*RDQPRS
Trigger: TGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCAGGCTGAACAGCATTaGCTGTTGGTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVQAEQH*LLVWKL
Trigger: CAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCAGGCTGAACAGCATTaGCTGTTGGTGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNQAEQH*LLVWKL
Trigger: CAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCCTGCACCGTGTCTaGATCGACCACATACTTCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGLHRV*IDHILL
Trigger: GAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATGGTACCGAGTACACTaGCGAAGCCTGCACATTCGT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKWYRVH*RSLHIR
Trigger: ACGAATGTGCAGGCTTCGTCAGTGTACTCGGTACCA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCAGTACACTTTAGGATaGTTTAACAATGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVQYTLG*FNNGTL
Trigger: CAAAGTGCCATTGTTAAATCATCCTAAAGTGTACTG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAAATTAGTGTCTCTATaGCTGGCATGCTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVKLVSL*LACSLF
Trigger: AAAAAGAGAGCATGCCAGTCATAGAGACACTAATTT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLPVPS*SCRCFY
Trigger: GTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTGCCAGTGCCCAGCTaGAGTTGTAGATGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLPVPS*SCRCFY
Trigger: GTAAAAGCATCTACAACTTCAGCTGGGCACTGGCAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGTATCAAAGATTCTCTaGCTTCTACCGTGTATCCTG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTVSKIL*LLPCIL
Trigger: CAGGATACACGGTAGAAGTCAGAGAATCTTTGATAC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAACAGTAGGCTCTTGGTaGATCAGTTTGGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTTVGSW*ISLGNS
Trigger: TGAATTTCCCAAACTGATTCACCAAGAGCCTACTGT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAATACTGAAAACTTGTaGCTCCCTCAGCGTTATTCT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVNTENL*LPQRYS
Trigger: AGAATAACGCTGAGGGAGTCACAAGTTTTCAGTATT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCTTTTACCTGTGACCTaGGTCTTCTTGCAATCAGGG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLLPVT*VFLQSG
Trigger: CCCTGATTGCAAGAAGACTCAGGTCACAGGTAAAAG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGATAAAATCGGCAAGATaGGTGCTTCAGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVIKSAR*VLQRLP
Trigger: AGGCAGGCGCTGAAGCACTCATCTTGCCGATTTTAT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGATCAGTCATTCATTaGCCACATGGCATCAAACCT +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRSVIH*PHGIKP
Trigger: AGGTTTGATGCCATGTGGTCAATGAATGACTGATCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGTAAGGGCTGCTTCTaGTCCTTGCCACCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNCKGCF*SLPPCN
Trigger: ATTGCAAGGTGGCAAGGAGCAGAAGCAGCCCTTACA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTGTAAGGGCTGCTTCTaGTCCTTGCCACCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLCKGCF*SLPPCN
Trigger: ATTGCAAGGTGGCAAGGAGCAGAAGCAGCCCTTACA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTCTTTCAAGCTGCCTaGACAGTCGGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFFQAA*TVGTTS
Trigger: AGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTTCTTCTTTCAAGCTaGCTGCACAGTCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVFLLSS*LHSRDH
Trigger: GTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTTCTTCTTTCAAGCTaGCTGCACAGTCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVFLLSS*LHSRDH
Trigger: GTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGAGGTGCTTCTGACTaGCCTCCTTCCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGGASD*PPSTGE
Trigger: TTCTCCAGTGGAAGGAGGGCAGTCAGAAGCACCTCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGGTGCTTGTGAGGTCTaGTGTGATCTTTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNGACEV*CDLFPS
Trigger: GCTCGGAAAAAGATCACAGCAGACCTCACAAGCACC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCAGCATCTTGTTCTCTaGTTGGCGTTCCACCTACCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVQHLVL*LAFHLP
Trigger: AGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCAGCATCTTGTTCTCTaGTTGGCGTTCCACCTACCT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLQHLVL*LAFHLP
Trigger: AGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTGCTCACAGAGCTCTaGGTTCTTACCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLLTEL*VLTDSS
Trigger: GGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVPRCSF*SQSSAF
Trigger: GAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLPRCSF*SQSSAF
Trigger: GAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGAGTAAGGTGGAGGTaGAGGAAAGTCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRVRWR*RKVSNG
Trigger: CCCATTGCTGACTTTCCTGCACCTCCACCTTACTCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAAATTACAAGCCTCTaGCCCCAAGCTGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLEITSL*PQAEVV
Trigger: GACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGAAATTACAAGCCTCTaGCCCCAAGCTGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNEITSL*PQAEVV
Trigger: GACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSHVQST*RPGRRV
Trigger: TACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTATTGGATGGTCCCACTaGACCAGGCTGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVIGWSH*TRLNSI
Trigger: AATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAAT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATTGGATGGTCCCACTaGACCAGGCTGAACAGCATT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNIGWSH*TRLNSI
Trigger: AATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGAAAGTAAACAAGGATaGATTGAGCTGATACGGTTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCESKQG*IELIRL
Trigger: CAACCGTATCAGCTCAATGCATCCTTGTTTACTTTC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTACACTGACGAAGCCTaGACATTCGTAGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVYTDEA*TFVGEA
Trigger: TGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGGAGACTTTGCTGCTaGTTCCCAAGGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRRLCC*FPRSWS
Trigger: AGACCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACCTTTATGTGCGTCCTaGCTTTTACATGTTACTTCG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTPLCAS*LLHVTS
Trigger: CGAAGTAACATGTAAAAGGCAGGACGCACATAAAGG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGACCTATGCTGCCAGTaGCCAGCTGAAGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLDLCCQ*PAEVVD
Trigger: ATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAGACTGAGGGGAATATaGTGTACTTACATGTCCATG +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTRLRGI*CTYMSM
Trigger: CATGGACATGTAAGTACAGCATATTCCCCTCAGTCT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTCTGGGATTCACTCTaGCCTCCTAGAAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVFWDSL*PPRRLR
Trigger: CCTCAGTCTTCTAGGAGGGCAGAGTGAATCCCAGAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGTACAAAGTTTGACATaGTCTAGAGTGACAACCCAA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVVQSLT*SRVTTQ
Trigger: TTGGGTTGTCACTCTAGAGCATGTCAAACTTTGTAC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACCTGTATACTTGGGATaGACTTTATTGGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTPVYLG*TLLAGK
Trigger: TTTGCCAGCCAATAAAGTGCATCCCAAGTATACAGG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACCTCATGCACTTGACTaGTGTCCTGACTGGGATTGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKPHALD*CPDWDW
Trigger: CCAATCCCAGTCAGGACAGCAGTCAAGTGCATGAGG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGTGGGAAGGGTTTGCTaGCTCATGCACTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKVGRVC*LMHLTA
Trigger: AGCAGTCAAGTGCATGAGGCAGCAAACCCTTCCCAC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAGAATTCTGTGCACTaGGTCTTTGTGGCCGGTCGA +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKNSVH*VFVAGR
Trigger: TCGACCGGCCACAAAGACCCAGTGCACAGAATTCTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCCTTGGAGTTGGGGTTaGGAGCATCCGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVPWSWG*EHPLEE
Trigger: TTCTTCTAACGGATGCTCCCAACCCCAACTCCAAGG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTAGGGTGTATTTCCTaGCCCTCCGACGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLGCIS*PSDVAS
Trigger: AGAAGCGACGTCGGAGGGCCAGGAAATACACCCTAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSFGKKS*FSGHRS
Trigger: AGACCGATGGCCTGAGAACCACGACTTCTTACCAAA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTGAAGCCATTCTGTTaGGGAACATGGCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLKPFC*GTWPRP
Trigger: TGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGGCCGTTCTATTCATaGGGACCATCCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNWPFYS*GPSSGC
Trigger: ACATCCAGAGGATGGTCCCCATGAATAGAACGGCCA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACCCTGGGAAGGGTTTaGCCGTTCTATTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTLGRV*PFYSWG
Trigger: TCCCCATGAATAGAACGGCCAAACCCTTCCCAGGGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCTACTGCTGCTTGTaGTCCTTTGAAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGYCCL*SFEGTS
Trigger: GCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGTGTGTAATTCTGACTaGCTACTGCTGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSVCNSD*LLLLVV
Trigger: GACCACAAGCAGCAGTAGCCAGTCAGAATTACACAC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGGAAGCTCATTGGATaGTCCCACTGCACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVWKLIG*SHCTRL
Trigger: CAGCCTGGTGCAGTGGGACCATCCAATGAGCTTCCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTGAGAGCAGCCAGTaGGTAAGACGGCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLESSQ*VRRRVD
Trigger: ATCCACTCGCCGTCTTACCCACTGGCTGCTCTCAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTTGCATCTGGAGGTTaGAAAGTAAACAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCFASGG*KVNKDA
Trigger: TGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLTDDF*GRPSFA
Trigger: TGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTCATTCCAATCCTCTaGAGGCCCTGGAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFIPIL*RPWKHL
Trigger: AAGGTGCTTCCAGGGCCTCCAGAGGATTGGAATGAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTAACTGTGAACCATATTaGGAGGTGGTGGACATATTA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCNCEPY*EVVDIL
Trigger: TAATATGTCCACCACCTCCCAATATGGTTCACAGTT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCATCCCCTTGGGTGTaGGTTGTAGTTGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPSPWV*VVVVIS
Trigger: GCTGATTACAACTACAACCCACACCCAAGGGGATGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGCTTTCATGGGCAACTaGAGATGTACTCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTAFMGN*RCTHLV
Trigger: AACTAAGTGAGTACATCTCCAGTTGCCCATGAAAGC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACAGTCTCCACACACATaGGGTTCCTCGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKQSPHT*GSSCFT
Trigger: TGTGAAGCACGAGGAACCCCATGTGTGTGGAGACTG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACCCTCTTCTATAAAGTaGGACTGTATGGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTPSSIK*DCMVQD
Trigger: ATCTTGGACCATACAGTCCCACTTTATAGAAGAGGG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAATTCTAAGATTAAAGTaGCAATGCTCAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIILRLK*QCSDSQ
Trigger: TTGGGAATCTGAGCATTGCCACTTTAATCTTAGAAT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGACTGCTGTCCTGACTaGGATTGGCACCGTGACACT +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSDCCPD*DWHRDT
Trigger: AGTGTCACGGTGCCAATCCCAGTCAGGACAGCAGTC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAGGAATCTTTGAGGTaGGAAGGGTTTGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLEESLR*EGFAAS
Trigger: TGAGGCAGCAAACCCTTCCCACCTCAAAGATTCCTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATCACTTGCCCTGAGCTaGGAGTTTGCTCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKSLALS*EFALFR
Trigger: CCTGAACAGAGCAAACTCCCAGCTCAGGGCAAGTGA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp GTGGAAACCATGTGGTACTGTAGGGAGAGCACAGGTTaGGATGCCAGACAAATATCTAAATCTAACCCTAAT +
Preference number: 4 (lower is better)
Translates to: VETMWYCRESTG*DARQISKSNPN
Trigger: ATTAGGGTTAGATTTAGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCTACAGTACCACATGGTTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCACAAGGGTTGCCATTaGTGGAAACCACTTCATCTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVHKGCH*WKPLHL
Trigger: GAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCATAACCCCCATGTGTaGGATGCTCGAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLHNPHV*DARGFC
Trigger: ACAAAAACCTCGAGCATCTCACACATGGGGGTTATG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCATAACCCCCATGTGTaGGATGCTCGAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVHNPHV*DARGFC
Trigger: ACAAAAACCTCGAGCATCTCACACATGGGGGTTATG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGGGAACTTCAGTCTTaGCAGGGGCGAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGELQS*QGRGRI
Trigger: AATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGACAATCCTGTCATGTaGCAAGTTAGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKDNPVM*QVRVWV
Trigger: GACCCAGACCCTAACTTGTCACATGACAGGATTGTC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGGAGGATGAGGACTTaGCTGCAGGTTTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGRMRT*LQVLEQ
Trigger: TTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTTTTAGCAAAGAGCTaGGCTCCTCTCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLLAKS*APLPLI
Trigger: AATGAGTGGGAGAGGAGCTCAGCTCTTTGCTAAAAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTTTAGCAAAGAGCTaGGCTCCTCTCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLLAKS*APLPLI
Trigger: AATGAGTGGGAGAGGAGCTCAGCTCTTTGCTAAAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTTTTAGCAAAGAGCTaGGCTCCTCTCCCACTCATT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLLAKS*APLPLI
Trigger: AATGAGTGGGAGAGGAGCTCAGCTCTTTGCTAAAAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNKDALS*YGWCFM
Trigger: CATGAAGCACCAACCGTATCAGCTCAATGCATCCTT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACCACTTTTCTTGGCTaGGAACTTTGGCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTTFLG*ELWPWC
Trigger: GCACCAAGGCCAAAGTTCTCAGCCAAGAAAAGTGGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTATAAAGGCTGATTCCTaGTGTTTGATATCACTGATC +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVIKADS*CLISLI
Trigger: GATCAGTGATATCAAACATCAGGAATCAGCCTTTAT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGAGAGGTTTGACACATaGTTAAGGGGAAACTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSERFDT*LRGNLW
Trigger: CCACAAGTTTCCCCTTAATCATGTGTCAAACCTCTC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGCCCTCCTAGAAGACTaGGGGGAATATGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKALLED*GEYAVL
Trigger: AAGTACAGCATATTCCCCTCAGTCTTCTAGGAGGGC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAATGACGCTCATAGGATaGCCTGTCATTTTTGTACTA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTMTLIG*PVIFVL
Trigger: TAGTACAAAAATGACAGGTCATCCTATGAGCGTCAT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCATGTCATCCTGACTTaGACCAAAATGCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVHVILT*TKMLDF
Trigger: AAAATCAAGCATTTTGGTTCAAGTCAGGATGACATG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAATGGACAAACAGGCTaGATACAGAGGAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFNGQTG*IQRNVN
Trigger: GTTTACATTCCTCTGTATTCAGCCTGTTTGTCCATT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTCTGTTTTTGGAAAGTaGTCATGCCTCTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSSVFGK*SCLSGK
Trigger: CTTGCCTGAGAGGCATGATCACTTTCCAAAAACAGA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCATATTGGACTTACGTaGAGAATTATGATCTGCACC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFHIGLT*RIMICT
Trigger: GGTGCAGATCATAATTCTTCACGTAAGTCCAATATG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATTTATACTCATTCTTaGTTAGAAGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFIYTHS*LEAGGQ
Trigger: CTGACCCCCTGCTTCTAATCAAGAATGAGTATAAAT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCATATAAGCAGCCTCTaGCTGATTTTGCATTTTGTT +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVHISSL*LILHFV
Trigger: AACAAAATGCAAAATCAGTCAGAGGCTGCTTATATG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACTCTCCGAGTACACTaGCGAAGCCTGCACATTCGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTLRVH*RSLHIR
Trigger: ACGAATGTGCAGGCTTCGTCAGTGTACTCGGAGAGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGGGTAGGTGAGATCTaGACAAGGGTTGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVRVGEI*TRVAID
Trigger: ATCAATGGCAACCCTTGTGCAGATCTCACCTACCCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTCTTTCAAGCTGCCTaGACAGTCGGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKFFQAA*TVGTTS
Trigger: AGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTCACTCTCAACTCTCTaGCACTGGAGATCTGGATTA +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSSLSTL*HWRSGL
Trigger: TAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLLPAL*LLMRRQ
Trigger: TTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGTGCTTGTGAGGTCTaGTGTGATCTTTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGACEV*CDLFPS
Trigger: GCTCGGAAAAAGATCACAGCAGACCTCACAAGCACC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACACATGGGTTTTGTCGTaGTTCTCCTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNTWVLS*FSFWPP
Trigger: AGGAGGCCAAAAGGAGAAGCACGACAAAACCCATGT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTGGAGGAGACAACGGTaGCCTTTGATGGGTTGGATG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSWRRQR*PLMGWM
Trigger: CATCCAACCCATCAAAGGGCACCGTTGTCTCCTCCA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTGACTGGCTACTGCTaGTTGTGGTCCTTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLTGYC*LWSFEG
Trigger: CCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTGACTGGCTACTGCTaGTTGTGGTCCTTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLTGYC*LWSFEG
Trigger: CCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGAAAGTAAACAAGGATaGATTGAGCTGATACGGTTG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFESKQG*IELIRL
Trigger: CAACCGTATCAGCTCAATGCATCCTTGTTTACTTTC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGGGAGGCCATCCTTTaGATCTGGAGGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGEAIL*IWRLES
Trigger: ACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACCGAGAGGAGACTTTaGTGCTGCTTCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTERRL*CCFPRS
Trigger: ACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACATGGGGTTCCTCGTaGTTCACAATCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTWGSS*FTISPC
Trigger: ACAGGGGCTGATTGTGAAGCACGAGGAACCCCATGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGACCTATGCTGCCAGTaGCCAGCTGAAGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKDLCCQ*PAEVVD
Trigger: ATCTACAACTTCAGCTGGGCACTGGCAGCATAGGTC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGTTCCTAACAAGGTATaGTTTACACTACCAATGCAG +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFVPNKV*FTLPMQ
Trigger: CTGCATTGGTAGTGTAAAGCATACCTTGTTAGGAAC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCTGTCCTACAATGCCTaGTTCTTGAAAGAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLSYNA*FLKEVG
Trigger: GCCGACTTCTTTCAAGAAGCAGGCATTGTAGGACAG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGGGAATTTATTAGCCTaGTTTGTGGCCCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLGNLLA*FVALGQ
Trigger: TTGGCCAAGGGCCACAAAGCAGGCTAATAAATTCCC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTACTTAGCCTCTTTGTaGCTCAGAATCTCATCTGTA +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFYLASL*LRISSV
Trigger: TACAGATGAGATTCTGAGGCACAAAGAGGCTAAGTA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGGCATCAAACCTGTaGAGTGACCTAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMASNL*SDLGSS
Trigger: GCTGGAGCCTAGGTCACTGCACAGGTTTGATGCCAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTTTTGATGAGCATTTaGAGAGAGTCTGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLLMSI*RESVML
Trigger: AAGCATAACAGACTCTCTCCAAATGCTCATCAAAAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACTTATTCCACTGGATaGTCTTTTGATGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTYSTG*SFDEHL
Trigger: CAAATGCTCATCAAAAGACCATCCAGTGGAATAAGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTCTGGATTATCTTGCTaGACCTCAGGAAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVSGLSC*TSGKGL
Trigger: CAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCTGCTTCACTTTCCTaGATCACTCTCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPASLS*ITLNSL
Trigger: CAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCCTGCTTCACTTTCCTaGATCACTCTCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLPASLS*ITLNSL
Trigger: CAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTATCTTTTTCCGAGCGTaGATCTTCTCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVIFFRA*IFSLLC
Trigger: ACAGAGCAGGGAGAAGATCCACGCTCGGAAAAAGAT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGATCTTTTTCCGAGCGTaGATCTTCTCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVIFFRA*IFSLLC
Trigger: ACAGAGCAGGGAGAAGATCCACGCTCGGAAAAAGAT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACATCAACACCCCCTTaGAGTTGGGGTTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTSTPP*SWGWEH
Trigger: ATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATCTTGTTCTCTGCTTaGCGTTCCACCTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLILFSA*RSTYLV
Trigger: GACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVFGKKS*FSGHRS
Trigger: AGACCGATGGCCTGAGAACCACGACTTCTTACCAAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFGKKS*FSGHRS
Trigger: AGACCGATGGCCTGAGAACCACGACTTCTTACCAAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGAAGCCATTCTGTTaGGGAACATGGCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLKPFC*GTWPRP
Trigger: TGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATGGGGACCATCCTCTaGATGTTTGCTGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNMGTIL*MFAVSD
Trigger: ATCTGAGACAGCAAACATCCAGAGGATGGTCCCCAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACAGGAAAGTCAGCAATaGGACTCGTCATGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKQESQQ*DSSCFG
Trigger: CCCGAAACATGACGAGTCCCATTGCTGACTTTCCTG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCGTGCTTCTCCTTTTaGCCTCCTGCAATATTCCTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSCFSF*PPAIFL
Trigger: CAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTGACTGCAGGTTTTaGAGCAACAGGAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLDCRF*SNRRRG
Trigger: ACCCCTCCTCCTGTTGCTCCAAAACCTGCAGTCAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCCTGGAGACCAGACTaGGGAAACTGGAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSWRPD*GNWSYW
Trigger: CCAGTAACTCCAGTTTCCCCAGTCTGGTCTCCAGGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGTGTGTAATTCTGACTaGCTACTGCTGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNVCNSD*LLLLVV
Trigger: GACCACAAGCAGCAGTAGCCAGTCAGAATTACACAC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTTCCTGGAAGCTCATTaGATGGTCCCACTGCACCAG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSFLEAH*MVPLHQ
Trigger: CTGGTGCAGTGGGACCATCCAATGAGCTTCCAGGAA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGAGGTGCTCGGACATTaGAGGAGTACTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVEVLGH*RSTSNW
Trigger: CCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGCGTCTCCATCCCCTTaGGTGTGGGTTGTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVASPSP*VWVVVV
Trigger: TACAACTACAACCCACACCCAAGGGGATGGAGACGC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCTAACTTTCATGTTTaGCGTCTCCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSNFHV*RLHPLG
Trigger: CCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTCTAACTTTCATGTTTaGCGTCTCCATCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVSNFHV*RLHPLG
Trigger: CCCAAGGGGATGGAGACGCCAAACATGAAAGTTAGA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCATTGCACTCCAGACTaGGTGGGACAGAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHCTPD*VGQSKT
Trigger: AGTCTTGCTCTGTCCCACCCAGTCTGGAGTGCAATG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGTAGAACGTGGCCCTaGCAAGCCAAGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSRTWP*QAKYFL
Trigger: CAGAAAATACTTGGCTTGCCAGGGCCACGTTCTACT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGTAGAACGTGGCCCTaGCAAGCCAAGTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVSRTWP*QAKYFL
Trigger: CAGAAAATACTTGGCTTGCCAGGGCCACGTTCTACT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAACTGGAAATACTTCTaGGTCATTACCATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFNWKYF*VITILG
Trigger: TCCTAGGATGGTAATGACCCAGAAGTATTTCCAGTT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCGAGGGTCATGTTTCTaGGAATACAGTGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRGSCF*EYSVGS
Trigger: AGAACCAACACTGTATTCCCAGAAACATGACCCTCG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGGTGTCTGGATCCTGTaGGAATTTATTAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSGVWIL*EFISLL
Trigger: AAGCAGGCTAATAAATTCCCACAGGATCCAGACACC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGGGCTATCTCTAAGGTaGGGAAATCTTAATTTTACA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVGLSLR*GNLNFT
Trigger: TGTAAAATTAAGATTTCCCCACCTTAGAGATAGCCC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAAAGCCGTCACCAAGTaGGTCTGCCTGTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVKAVTK*VCLFLC
Trigger: ACAAAGAAACAGGCAGACCCACTTGGTGACGGCTTT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCTGGGGAGACTAAAATaGATAGGCCCTCATCAATAC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLGRLK*IGPHQY
Trigger: GTATTGATGAGGGCCTATCCATTTTAGTCTCCCCAG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp GAGGTGACATATCTGAAATTAAGTAAGTTGAGGACTTaGCTAGGCATTCTCAGGGACTCAAGAAACACTGCA +
Preference number: 4 (lower is better)
Translates to: EVTYLKLSKLRT*LGILRDSRNTA
Trigger: TGCAGTGTTTCTTGAGTCCCTGAGAATGCCTAGCAAAGTCCTCAACTTACTTAATTTCAGATATGTCACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp AGAAAGGTAGGCTGGGAAGTAGGTCCTTATGATATCTaGACTATGGATCCCAGATTTACATTTCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: RKVGWEVGPYDI*TMDPRFTFHLS
Trigger: TGACAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTCCCAGCCTACCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp GGTCAAAGCTATCTACAAAGCAGAGACAGTAGGCTCTaGGTGAATCAGTTTGGGAAATTCACAATTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GQSYLQSRDSRL*VNQFGKFTIKQ
Trigger: CTGCTTAATTGTGAATTTCCCAAACTGATTCACCAAGAGCCTACTGTCTCTGCTTTGTAGATAGCTTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp TGTGAACCATATTGGGAGGTGGTGGACATATTATTATaGGCTGTGACATTATACTCTTGCCTTCCACATGAG +
Preference number: 4 (lower is better)
Translates to: CEPYWEVVDILL*AVTLYSCLPHE
Trigger: CTCATGTGGAAGGCAAGAGTATAATGTCACAGCCAATAATAATATGTCCACCACCTCCCAATATGGTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTATGTCTCTCCTGTaGAAGGGACAGTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLMSLL*KGQLQL
Trigger: GAGCTGCAACTGTCCCTTTCACAGGAGAGACATAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTCACTTGTTTTTCTaGCAGGCTTTCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLHLFF*QAFTPP
Trigger: AGGAGGAGTGAAAGCCTGTCAGAAAAACAAGTGAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTTCACTTGTTTTTCTaGCAGGCTTTCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVLHLFF*QAFTPP
Trigger: AGGAGGAGTGAAAGCCTGTCAGAAAAACAAGTGAAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTTTGGGCTGTGATCTaGTCCATTCTCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVFWAVI*SILSLL
Trigger: GAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTTCTTTTTGGGCTGTaGTCTGATCCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLLFGL*SDPFSP
Trigger: GGGAGAGAATGGATCAGATCACAGCCCAAAAAGAAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSSQMSH*SHSVGE
Trigger: TTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTACTGGTTGGGAGGATaGGGACTTGACTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVYWLGG*GLDCRF
Trigger: AAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTGCATATACATACTTaGGCCCTAATAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLHIHT*ALIGWP
Trigger: GGGCCAACCTATTAGGGCTCAAGTATGTATATGCAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGATGGTTTCCACACCTaGATTGTGACACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLDGFHT*IVTPLF
Trigger: GAAAAGTGGTGTCACAATTCAGGTGTGGAAACCATC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATAGGAACTCGTAAATaGTTGTCGCTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLIGTRK*LSLLSW
Trigger: CCAGCTCAAGAGCGACAATCATTTACGAGTTCCTAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACAATGCCTGCTTCTTaGAAGAAGTCGGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTMPAS*KKSALS
Trigger: AGAAAGTGCCGACTTCTTTCAAGAAGCAGGCATTGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGTCCTTATGATATCTTaGCTATGGATCCCAGATTTA +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFVLMIS*LWIPDL
Trigger: TAAATCTGGGATCCATAGTCAAGATATCATAAGGAC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCTGCATTATTGTTACTaGAATTTGAGGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFLHYCY*NLRVSL
Trigger: GAGAGAAACCCTCAAATTTCAGTAACAATAATGCAG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTGGGCTCTTTCCCTATaGTGCATAAAGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLWALSL*CIKCMN
Trigger: GTTCATGCACTTTATGCATCATAGGGAAAGAGCCCA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCAGACCCAGAGGCTTTaGTCTGATTTCGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNQTQRL*SDFESL
Trigger: CAAAGATTCGAAATCAGAGCAAAGCCTCTGGGTCTG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTCTTTCAAGCTGCCTaGACAGTCGGGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVFFQAA*TVGTTS
Trigger: AGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCTCAGGAAAGGGTCTaGTTTCTCATTAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVPQERV*FLISRD
Trigger: ATCCCTACTAATGAGAAAGCAGACCCTTTCCTGAGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGATCTGGATTATCTTaGTGGACCTCAGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRSGLS*WTSGKG
Trigger: ACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGAGTAAGGTGGAGGTaGAGGAAAGTCAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRVRWR*RKVSNG
Trigger: CCCATTGCTGACTTTCCTGCACCTCCACCTTACTCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGAAATTACAAGCCTCTaGCCCCAAGCTGAGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVEITSL*PQAEVV
Trigger: GACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNILTGY*CLWSFE
Trigger: TTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTCTTTCCCTTTTTCTTaGCCATTTTGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNSFPFS*PFWRAV
Trigger: CACAGCCCTCCAAAATGGGCAAGAAAAAGGGAAAGA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTATTCATTTTCAAGTATaGTGGAGAATACCCACAGTA +
Preference number: 4 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCIHFQV*WRIPTV
Trigger: TACTGTGGGTATTCTCCAGCATACTTGAAAATGAAT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAAATGTTTAAGGTCCTaGAGAAAGTCAGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTKCLRS*RKSVTV
Trigger: TACAGTCACTGACTTTCTGCAGGACCTTAAACATTT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAGATTAAAGTGGCAATaGTCAGATTCCCAATCTTAC +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTRLKWQ*SDSQSY
Trigger: GTAAGATTGGGAATCTGAGCATTGCCACTTTAATCT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTTGATTTTGGGTTGTTaGATGGCCTTGATTATTGCA +
Preference number: 4 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFLILGC*MALIIA
Trigger: TGCAATAATCAAGGCCATGCAACAACCCAAAATCAA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGTTAAGAATTCAGGCTaGAGACTGAATCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSVKNSG*RLNPGA
Trigger: GGCCCCTGGATTCAGTCTGCAGCCTGAATTCTTAAC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATTTAAGCTTCAACTATaGTACCAGGTTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTFKLQL*YQVTQD
Trigger: ATCCTGAGTAACCTGGTAGCATAGTTGAAGCTTAAA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCGGGACCACTTCTTTaGTTCTCAGCTAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSGPLL*FSARGT
Trigger: AGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCCTTGGAGTTGGGGTTaGGAGCATCCGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVPWSWG*EHPLEE
Trigger: TTCTTCTAACGGATGCTCCCAACCCCAACTCCAAGG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCAGGAAAGTCAGCAATaGGACTCGTCATGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSQESQQ*DSSCFG
Trigger: CCCGAAACATGACGAGTCCCATTGCTGACTTTCCTG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCAAGAGTTCAGGATTTaGGCTTACTTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSQEFRI*AYFGLF
Trigger: AAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLTDDF*GRPSFA
Trigger: TGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGCCACAATGGATTCCTaGATGTTTCTGGGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNATMDS*MFLGWK
Trigger: TTTCCAACCCAGAAACATCCAGGAATCCATTGTGGC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTCATTCCAATCCTCTaGAGGCCCTGGAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVFIPIL*RPWKHL
Trigger: AAGGTGCTTCCAGGGCCTCCAGAGGATTGGAATGAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCCATCCCCTTGGGTGTaGGTTGTAGTTGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVPSPWV*VVVVIS
Trigger: GCTGATTACAACTACAACCCACACCCAAGGGGATGG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGGTCAGACTTTGTTGTaGATATTGTTTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTGQTLL*ILFWRT
Trigger: AGTTCTCCAAAACAATATCCACAACAAAGTCTGACC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACATATAGCCCCTGGTaGGCAGACAGGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTYSPW*ADRESK
Trigger: TTTGCTTTCCCTGTCTGCCCACCAGGGGCTATATGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTATTCTAAGATTAAAGTaGCAATGCTCAGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: HVSSALRRVYCERATQSVILRLK*QCSDSQ
Trigger: TTGGGAATCTGAGCATTGCCACTTTAATCTTAGAAT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAGCATCAGAATCACCTaGGTTGTATGTTACAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTSIRIT*VVCYKN
Trigger: GTTTTTGTAACATACAACCCAGGTGATTCTGATGCT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCATTCATTGACCACATaGCATCAAACCTGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVHSLTT*HQTCAV
Trigger: CACTGCACAGGTTTGATGCCATGTGGTCAATGAATG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCACAAGGGTTGCCATTaGTGGAAACCACTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHKGCH*WKPLHL
Trigger: GAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCATAACCCCCATGTGTaGGATGCTCGAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHNPHV*DARGFC
Trigger: ACAAAAACCTCGAGCATCTCACACATGGGGGTTATG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTCTTTTTGGGCTGTaGTCTGATCCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLLFGL*SDPFSP
Trigger: GGGAGAGAATGGATCAGATCACAGCCCAAAAAGAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGCATATGGCAACTGTaGACCATATTGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVCIWQL*TILGGG
Trigger: ACCACCTCCCAATATGGTTCACAGTTGCCATATGCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACACTACAGTTGGCACATaGTCCGTTCTTCTAACTTTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNTTVGT*SVLLTF
Trigger: GAAAGTTAGAAGAACGGATCATGTGCCAACTGTAGT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTACTACAGTTGGCACATaGTCCGTTCTTCTAACTTTC +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVTTVGT*SVLLTF
Trigger: GAAAGTTAGAAGAACGGATCATGTGCCAACTGTAGT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGCAGGTGTTTGATCTaGTTATTTGATGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVSRCLI*LFDGHA
Trigger: AGCATGCCCATCAAATAATCAGATCAAACACCTGCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTACCTTCACTACATTTaGACCTTTCACCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLYLHYI*TFHHRR
Trigger: CCTCCTATGGTGAAAGGTTCAAATGTAGTGAAGGTA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCCAGGCAAGTTTTTCTaGGAGGTCTCTAAACATATC +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLPGKFF*EVSKHI
Trigger: GATATGTTTAGAGACCTCTCAGAAAAACTTGCCTGG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCCATTGTTCTGCAGCTaGCTTAATTCTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSPLFCS*LNSPLY
Trigger: ATAAAGAGGAGAATTAAGTCAGCTGCAGAACAATGG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGCTCACAAGGACTGCTaGTTAAAAGCAGTAATCTGT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLAHKDC*LKAVIC
Trigger: ACAGATTACTGCTTTTAATCAGCAGTCCTTGTGAGC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCATCTCCTGGACGTTTaGAATAAAATCGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLHLLDV*NKIGKM
Trigger: CATCTTGCCGATTTTATTTCAAACGTCCAGGAGATG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTATTTATACTCATTCTTaGTTAGAAGCAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSIYTHS*LEAGGQ
Trigger: CTGACCCCCTGCTTCTAATCAAGAATGAGTATAAAT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAGATCAGTCATTCATTaGCCACATGGCATCAAACCT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRSVIH*PHGIKP
Trigger: AGGTTTGATGCCATGTGGTCAATGAATGACTGATCT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGGGTAGGTGAGATCTaGACAAGGGTTGCCATTGAT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRVGEI*TRVAID
Trigger: ATCAATGGCAACCCTTGTGCAGATCTCACCTACCCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGCTTGCACCAAGAAATaGTACTTCACATGTATCCTC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNACTKK*YFTCIL
Trigger: GAGGATACATGTGAAGTAGCATTTCTTGGTGCAAGC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHPLDV*CLRCPT
Trigger: AGTGGGACATCTGAGACAGCAAACATCCAGAGGATG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACATGGGTTTTGTCGTaGTTCTCCTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTWVLS*FSFWPP
Trigger: AGGAGGCCAAAAGGAGAAGCACGACAAAACCCATGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTCCAGTGCCCCGTTTaGCTTCTGAATTTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLQCPV*LLNFEG
Trigger: TCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGGCAGAGGAGCTTTaGATGAAATTACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLAEEL*MKLQAS
Trigger: AGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTGGCAGAGGAGCTTTaGATGAAATTACAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLAEEL*MKLQAS
Trigger: AGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGTGACATTATACTCTTaGCTTCCACATGAGCCCATA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVVTLYS*LPHEPI
Trigger: TATGGGCTCATGTGGAAGGCAAGAGTATAATGTCAC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAAGGCCTTGGTCACTTaGACCCTGGCATTATTTTTA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNKALVT*TLALFL
Trigger: TAAAAATAATGCCAGGGTGCAAGTGACCAAGGCCTT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGATGCTTTTACTGCATaGCTGACATGCCTCTTACAA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLDAFTA*LTCLLQ
Trigger: TTGTAAGAGGCATGTCAGGCATGCAGTAAAAGCATC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAGGGCCCAAATTTTGTaGTCAGCTAATGTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRAQIL*SANVSY
Trigger: ATAGCTAACATTAGCTGAGCACAAAATTTGGGCCCT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGATAGGGTTGCCAACTaGTCCACTTTCAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLDRVAN*STFSVI
Trigger: TATTACACTGAAAGTGGAGCAGTTGGCAACCCTATC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAATCAGCCCTCTTAACTaGTATGGATATGTAATCTTA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTISPLN*YGYVIL
Trigger: TAAGATTACATATCCATAGCAGTTAAGAGGGCTGAT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGGGATCGAATTTATGTaGACAATCCTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNGIEFM*TILSCD
Trigger: GTCACATGACAGGATTGTCCACATAAATTCGATCCC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATCAACTCTCTGCCACTaGAGATCTGGATTATCTTGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKSTLCH*RSGLSC
Trigger: GCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATCTTGTTCTCTGCTTaGCGTTCCACCTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSILFSA*RSTYLV
Trigger: GACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCATCTTGTTCTCTGCTTaGCGTTCCACCTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVILFSA*RSTYLV
Trigger: GACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGAT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGTGTGTAATTCTGACTaGCTACTGCTGCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVVCNSD*LLLLVV
Trigger: GACCACAAGCAGCAGTAGCCAGTCAGAATTACACAC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTTTCTTGCCCATTTTaGAGGGCTGTGCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVFSCPF*RAVQLM
Trigger: CATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTTTGCATCTGGAGGTTaGAAAGTAAACAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSFASGG*KVNKDA
Trigger: TGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGGATGTTTCTGGGTTaGAAAGCATCATCCACTAGA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNWMFLG*KASSTR
Trigger: TCTAGTGGATGATGCTTTCCAACCCAGAAACATCCA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTATTCCTGGATGTTTCTaGGTTGGAAAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVIPGCF*VGKHHP
Trigger: TGGATGATGCTTTCCAACCCAGAAACATCCAGGAAT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCAAGTAATGCTCTATaGATCAGCCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPSNAL*ISQQGS
Trigger: ACTTCCTTGTTGGCTGATCCATAGAGCATTACTTGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAATCAAACTTCACTCTaGCAGGTGTCTTGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNNQTSL*QVSCLN
Trigger: GTTGAGACAAGACACCTGCCAGAGTGAAGTTTGATT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCCCTCTTCTATAAAGTaGGACTGTATGGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLPSSIK*DCMVQD
Trigger: ATCTTGGACCATACAGTCCCACTTTATAGAAGAGGG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGTCTGATGAGACTGTaGAAACCATGTGGTACTGTA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGLMRL*KPCGTV
Trigger: TACAGTACCACATGGTTTCCACAGTCTCATCAGACC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAAAATGTCTATTGCTTaGAGCTACCAAACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTKMSIA*SYQTLR
Trigger: TCTTAGAGTTTGGTAGCTCCAAGCAATAGACATTTT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp TTTAGTTATCAACTCCAAATAGTGGCTCTGCTAAGATaGCCACCTGTCCAACAGGAAATGGAAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: FSYQLQIVALLR*PPVQQEMERKH
Trigger: GTGTTTTCTTTCCATTTCCTGTTGGACAGGTGGCAATCTTAGCAGAGCCACTATTTGGAGTTGATAACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTTCACTTGTTTTTCTaGCAGGCTTTCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLHLFF*QAFTPP
Trigger: AGGAGGAGTGAAAGCCTGTCAGAAAAACAAGTGAAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTGCCTTCTGAATTTTaGAGGAGTGACAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLPSEF*RSDKSS
Trigger: TGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTGCCTTCTGAATTTTaGAGGAGTGACAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLLPSEF*RSDKSS
Trigger: TGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNWFPWT*LQNHFL
Trigger: CAAGAAATGATTCTGCAATCATGTCCATGGAAACCA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVWFPWT*LQNHFL
Trigger: CAAGAAATGATTCTGCAATCATGTCCATGGAAACCA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTGCATATACATACTTaGGCCCTAATAGGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLHIHT*ALIGWP
Trigger: GGGCCAACCTATTAGGGCTCAAGTATGTATATGCAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAATGATTGTCGCTCTTaGGCTGGCAATGAAAACCGA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSNDCRS*AGNENR
Trigger: TCGGTTTTCATTGCCAGCTCAAGAGCGACAATCATT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATGACGCTCATAGGATaGCCTGTCATTTTTGTACTA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLMTLIG*PVIFVL
Trigger: TAGTACAAAAATGACAGGTCATCCTATGAGCGTCAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGAACCAAAATGCTTaGTTTTGGGTTGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLNQNA*FWVVAW
Trigger: CCATGCAACAACCCAAAATCAAGCATTTTGGTTCAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACCCATGAGATTATTTaGATGACTGCCACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTHEII*MTATAS
Trigger: AGAAGCTGTGGCAGTCATTCAAATAATCTCATGGGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGCGTCATAGCATCTaGTTTTCTGAGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMRHSI*FSEPSW
Trigger: CCAAGATGGCTCAGAAAATCAGATGCTATGACGCAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAAAATTCCCTGGGTTTaGAAGGCAGCTGGAATATTA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLKIPWV*KAAGIL
Trigger: TAATATTCCAGCTGCCTTTCAAACCCAGGGAATTTT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCCTCAGGAAAGGGTCTaGTTTCTCATTAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVPQERV*FLISRD
Trigger: ATCCCTACTAATGAGAAAGCAGACCCTTTCCTGAGG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCACTCTCAACTCTCTaGCACTGGAGATCTGGATTA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSLSTL*HWRSGL
Trigger: TAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGAAAGTAAACAAGGATaGATTGAGCTGATACGGTTG +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNESKQG*IELIRL
Trigger: CAACCGTATCAGCTCAATGCATCCTTGTTTACTTTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR GCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGAAAGTAAACAAGGATaGATTGAGCTGATACGGTTG +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVESKQG*IELIRL
Trigger: CAACCGTATCAGCTCAATGCATCCTTGTTTACTTTC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATGTACACCTTTATGTaGGTCCTGCCTTTTACATGT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLMYTFM*VLPFTC
Trigger: ACATGTAAAAGGCAGGACGCACATAAAGGTGTACAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAAACTAAACAAAAACTaGCTCCCTACACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSKLNKN*LPTPHN
Trigger: GTTATGAGGTGTAGGGAGGCAGTTTTTGTTTAGTTT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAGATTAAAGTGGCAATaGTCAGATTCCCAATCTTAC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRLKWQ*SDSQSY
Trigger: GTAAGATTGGGAATCTGAGCATTGCCACTTTAATCT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAGGGCCCAAATTTTGTaGTCAGCTAATGTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRAQIL*SANVSY
Trigger: ATAGCTAACATTAGCTGAGCACAAAATTTGGGCCCT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGGGATCGAATTTATGTaGACAATCCTGTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKGIEFM*TILSCD
Trigger: GTCACATGACAGGATTGTCCACATAAATTCGATCCC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCAACTCTCTGCCACTaGAGATCTGGATTATCTTGC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSTLCH*RSGLSC
Trigger: GCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLNSIDC*CGNCWF
Trigger: AAACCAACAGTTTCCACACCAACAGTCAATGCTGTT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNNSIDC*CGNCWF
Trigger: AAACCAACAGTTTCCACACCAACAGTCAATGCTGTT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTTGCATCTGGAGGTTaGAAAGTAAACAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLFASGG*KVNKDA
Trigger: TGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGCTTCCCAAGGAGTTaGTCTCTTGTTTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVCFPRS*SLVCFL
Trigger: GAGAAAGCAAACAAGAGACCAACTCCTTGGGAAGCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGCCACAATGGATTCCTaGATGTTTCTGGGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVATMDS*MFLGWK
Trigger: TTTCCAACCCAGAAACATCCAGGAATCCATTGTGGC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGCTTTCATGGGCAACTaGAGATGTACTCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKAFMGN*RCTHLV
Trigger: AACTAAGTGAGTACATCTCCAGTTGCCCATGAAAGC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTTGTGGATATTGTTTTaGAGAACTTCCACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLWILF*RTSTLF
Trigger: GAAGAGGGTGGAAGTTCTCCAAAACAATATCCACAA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGATTTTGCCTGGTGTCTaGATCCTGTGGGAATTTATT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLILPGV*ILWEFI
Trigger: AATAAATTCCCACAGGATCCAGACACCAGGCAAAAT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATTTTGCCTGGTGTCTaGATCCTGTGGGAATTTATT +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLILPGV*ILWEFI
Trigger: AATAAATTCCCACAGGATCCAGACACCAGGCAAAAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAAAAAGTGCTTAGAGTaGTACCTAGCACATCTTAAG +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSKKCLE*YLAHLK
Trigger: CTTAAGATGTGCTAGGTACCACTCTAAGCACTTTTT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTGGTCTAGTGCACTGTaGGAATTTGTTCAACAGAAA +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLWSSAL*EFVQQK
Trigger: TTTCTGTTGAACAAATTCCCACAGTGCACTAGACCA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGGCTGTCCCTGACTaGATAAACAGGAAAACTATT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLAVPD*INRKTI
Trigger: AATAGTTTTCCTGTTTATCCAGTCAGGGACAGCCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTTGCTGCCATCTCCTaGACGTTTGAAATAAAATCG +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLFAAIS*TFEIKS
Trigger: CGATTTTATTTCAAACGTCCAGGAGATGGCAGCAAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTGGGGAGACTAAAATaGATAGGCCCTCATCAATAC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLGRLK*IGPHQY
Trigger: GTATTGATGAGGGCCTATCCATTTTAGTCTCCCCAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGCAGGTGTTTGATCTaGTTATTTGATGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSRCLI*LFDGHA
Trigger: AGCATGCCCATCAAATAATCAGATCAAACACCTGCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCAGTACACTTTAGGATaGTTTAACAATGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVQYTLG*FNNGTL
Trigger: CAAAGTGCCATTGTTAAATCATCCTAAAGTGTACTG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAAATTAGTGTCTCTATaGCTGGCATGCTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NNASAGILQMRESQNIRVKLVSL*LACSLF
Trigger: AAAAAGAGAGCATGCCAGTCATAGAGACACTAATTT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCCAAGGGCCTTTATTTaGGAAATTAAATCTAAACGC +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVPRAFI*EIKSKR
Trigger: GCGTTTAGATTTAATTTCTCAAATAAAGGCCCTTGG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTGAACCAAAATGCTTaGTTTTGGGTTGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLNQNA*FWVVAW
Trigger: CCATGCAACAACCCAAAATCAAGCATTTTGGTTCAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGTAGCTATTGTTTATTaGGTGCCCCTTAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLVAIVY*VPLRRI
Trigger: TATTCTTCTAAGGGGCACTCAATAAACAATAGCTAC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCATATAAGCAGCCTCTaGCTGATTTTGCATTTTGTT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVHISSL*LILHFV
Trigger: AACAAAATGCAAAATCAGTCAGAGGCTGCTTATATG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGCTAATAATTGTGTaGTCTCACCCTACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMLIIV*SHPTVS
Trigger: GGAGACTGTAGGGTGAGAGCACACAATTATTAGCAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACTTCGTGGATGCTCTaGCTAGAAATTATGCTAAGG +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTSWML*LEIMLR
Trigger: CCTTAGCATAATTTCTAGGCAGAGCATCCACGAAGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGTTCCTAACAAGGTATaGTTTACACTACCAATGCAG +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKVPNKV*FTLPMQ
Trigger: CTGCATTGGTAGTGTAAAGCATACCTTGTTAGGAAC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTTAAGCTTCAACTATaGTACCAGGTTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLFKLQL*YQVTQD
Trigger: ATCCTGAGTAACCTGGTAGCATAGTTGAAGCTTAAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTTTGATGAGCATTTaGAGAGAGTCTGTTATGCTT +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLLMSI*RESVML
Trigger: AAGCATAACAGACTCTCTCCAAATGCTCATCAAAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCAAGAGTTCAGGATTTaGGCTTACTTTGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVQEFRI*AYFGLF
Trigger: AAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGGATGTTTCTGGGTTaGAAAGCATCATCCACTAGA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVWMFLG*KASSTR
Trigger: TCTAGTGGATGATGCTTTCCAACCCAGAAACATCCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCATTCCTGGATGTTTCTaGGTTGGAAAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVIPGCF*VGKHHP
Trigger: TGGATGATGCTTTCCAACCCAGAAACATCCAGGAAT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCCAAGTAATGCTCTATaGATCAGCCAACAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVPSNAL*ISQQGS
Trigger: ACTTCCTTGTTGGCTGATCCATAGAGCATTACTTGG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGTCCAACAGGAAATaGAAAGAAAACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLSNRK*KENTSH
Trigger: ATGAGAAGTGTTTTCTTTCCATTTCCTGTTGGACAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGGGTCAGACTTTGTTGTaGATATTGTTTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: VLLFISVIPPTMSCDISVGQTLL*ILFWRT
Trigger: AGTTCTCCAAAACAATATCCACAACAAAGTCTGACC...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTATGCACTTTATTGGCTaGCAAACCTTTGATAAAATC +
Preference number: 4 (lower is better)
Translates to: RLKWYCVPSNQASFSERSMHFIG*QTFDKI
Trigger: GATTTTATCAAAGGTTTGCCAGCCAATAAAGTGCAT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATGGTCTAGTGCACTGTaGGAATTTGTTCAACAGAAA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKWSSAL*EFVQQK
Trigger: TTTCTGTTGAACAAATTCCCACAGTGCACTAGACCA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGTTTGAAAGGCAGCTaGAATATTAAGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGLKGS*NIKFLP
Trigger: AGGGAGGAACTTAATATTCCAGCTGCCTTTCAAACC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGGCTATCTCTAAGGTaGGGAAATCTTAATTTTACA +
Preference number: 4 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGLSLR*GNLNFT
Trigger: TGTAAAATTAAGATTTCCCCACCTTAGAGATAGCCC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp AATGTAAGGTTTAAAAGTGTCCTTGCTGGGAAGCCTTaGACAGAAATAATTGTTGAGAAATCTTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: NVRFKSVLAGKP*TEIIVEKSSTE
Trigger: CTCAGTGGAAGATTTCTCAACAATTATTTCTGTCAAAGGCTTCCCAGCAAGGACACTTTTAAACCTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTTGCCTTCTGAATTTTaGAGGAGTGACAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLPSEF*RSDKSS
Trigger: TGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTGCCTTCTGAATTTTaGAGGAGTGACAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLPSEF*RSDKSS
Trigger: TGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGGTTTCCATGGACATaGTTGCAGAATCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVWFPWT*LQNHFL
Trigger: CAAGAAATGATTCTGCAATCATGTCCATGGAAACCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCGGGCATTCTACAAATaGGAGAATCTCAGAATATCA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRAFYK*ENLRIS
Trigger: TGATATTCTGAGATTCTCTCATTTGTAGAATGCCCG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACATGTCATCCTGACTTaGACCAAAATGCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKHVILT*TKMLDF
Trigger: AAAATCAAGCATTTTGGTTCAAGTCAGGATGACATG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGCATTATTGTTACTaGAATTTGAGGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLHYCY*NLRVSL
Trigger: GAGAGAAACCCTCAAATTTCAGTAACAATAATGCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAAATGTTTAAGGTCCTaGAGAAAGTCAGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKKCLRS*RKSVTV
Trigger: TACAGTCACTGACTTTCTGCAGGACCTTAAACATTT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR GCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTACTTAGCCTCTTTGTaGCTCAGAATCTCATCTGTA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSYLASL*LRISSV
Trigger: TACAGATGAGATTCTGAGGCACAAAGAGGCTAAGTA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVNSIDC*CGNCWF
Trigger: AAACCAACAGTTTCCACACCAACAGTCAATGCTGTT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTTGCATCTGGAGGTTaGAAAGTAAACAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVFASGG*KVNKDA
Trigger: TGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCATATTGGGAGGTGGTaGACATATTATTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHIGRW*TYYYWL
Trigger: CAGCCAATAATAATATGTCCACCACCTCCCAATATG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAAAGTAATTGCTCACTaGCATGCCCCTATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVKVIAH*HAPMRN
Trigger: ATTTCTCATAGGGGCATGCCAGTGAGCAATTACTTT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CCA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTCAGAAGATTAAAATaGTACTGTGTACCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLFRRLK*YCVPSN
Trigger: GTTTGAGGGTACACAGTACCATTTTAATCTTCTGAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACACCACTAGACAACTaGAAATACTTCTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTPLDN*KYFWVI
Trigger: AATGACCCAGAAGTATTTCCAGTTGTCTAGTGGTGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAACCATGCAGTGGATTTaGGATAATATACATAAGGCA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKTMQWI*DNIHKA
Trigger: TGCCTTATGTATATTATCCCAAATCCACTGCATGGT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGCCTTAAGTTATTATTaGTTTAGTAGCAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKALSYY*FSSKPC
Trigger: GCATGGCTTGCTACTAAACCAATAATAACTTAAGGC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR TCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAAATTAGTGTCTCTATaGCTGGCATGCTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVKLVSL*LACSLF
Trigger: AAAAAGAGAGCATGCCAGTCATAGAGACACTAATTT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR GCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAATCAGCCCTCTTAACTaGTATGGATATGTAATCTTA +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKISPLN*YGYVIL
Trigger: TAAGATTACATATCCATAGCAGTTAAGAGGGCTGAT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCACTTATTCCACTGGATaGTCTTTTGATGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: SACNEREVCFMLTCKFKVTYSTG*SFDEHL
Trigger: CAAATGCTCATCAAAAGACCATCCAGTGGAATAAGT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CCA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTCAGAAGATTAAAATaGTACTGTGTACCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKFRRLK*YCVPSN
Trigger: GTTTGAGGGTACACAGTACCATTTTAATCTTCTGAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
3UTR CAA 72 bp TGTGAAAGATACTCAGCACAAATCAGGGCCCAAATTTaGTGCTCAGCTAATGTTAGCTATTATCAAAACTTA +
Preference number: 4 (lower is better)
Translates to: CERYSAQIRAQI*CSANVSYYQNL
Trigger: TAAGTTTTGATAATAGCTAACATTAGCTGAGCACAAAATTTGGGCCCTGATTTGTGCTGAGTATCTTTCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTATGCACTTTATTGGCTaGCAAACCTTTGATAAAATC +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSMHFIG*QTFDKI
Trigger: GATTTTATCAAAGGTTTGCCAGCCAATAAAGTGCAT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CCA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAAAATGTCTATTGCTTaGAGCTACCAAACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSKMSIA*SYQTLR
Trigger: TCTTAGAGTTTGGTAGCTCCAAGCAATAGACATTTT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACCACGTTCAAAGTACTaGCAGGCCGGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLPRSKY*QAGQEG
Trigger: ACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS CCA 90 bp AGGTGCTCGGACATTGGAGGAGTACTTCCAACTGGCCGGGAGAGATaGAGTGGGAGACTGAGCTCGAGCAGCGTGGGCCTGCACCGTGTC +
Preference number: 5 (lower is better)
Translates to: RCSDIGGVLPTGRER*SGRLSSSSVGLHRV
Trigger: GACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGTCTCAGGGATAGGGTaGCCAACTGCTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLVSGIG*PTAPLS
Trigger: TGAAAGTGGAGCAGTTGGCAACCCTATCCCTGAGAC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp TTGGAGGAGTACTTCCAACTGGCCGGGAGAGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCCTGCACCGTGTCTGAATCGACCACA +
Preference number: 5 (lower is better)
Translates to: LEEYFQLAGRDGVGD*ARAAWACTVSESTT
Trigger: TGTGGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp ATGAAGAGCTTGACGAGACAGACGAAGCTTGGGTGCGGTAGAGGATaGGCACTCAGCTTCGGGCGCCTGCCGAGGACGCAAGACTGGGTA +
Preference number: 5 (lower is better)
Translates to: MKSLTRQTKLGCGRG*ALSFGRLPRTQDWV
Trigger: TACCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCGTCAAGCTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000448416.6
CDS CCA 90 bp CTCGGACATTGGAGGAGTACTTCCAACTGGCCGGGAGAGATGGAGTaGGAGACTGAGCTCGAGCAGCGTGGGCCTGCACCGTGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: LGHWRSTSNWPGEME*ETELEQRGPAPCLN
Trigger: ATTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAATGTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp GGAGAAGGCGTCAGGGGGAGGAGTGACTGCAGAGTAAGGTGGAGGTaGAGGAAAGTCAGCAATGGGACTCGTCATGTTTCGGGTTGGCGA +
Preference number: 5 (lower is better)
Translates to: GEGVRGRSDCRVRWR*RKVSNGTRHVSGWR
Trigger: TCGCCAACCCGAAACATGACGAGTCCCATTGCTGACTTTCCTGCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACGCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp TGGAGGTGCAGGAAAGTCAGCAATGGGACTCGTCATGTTTCGGGTTaGCGAGAAGGGGGTAGCTGGCTGATTCACAGACCCTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: WRCRKVSNGTRHVSG*REGGSWLIHRPWEG
Trigger: CCCTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGTCCCATTGCTGACTTTCCTGCACCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp CCCTCTGGAGAAGGCGTCAGGGGGAGGAGTGACTGCAGAGTAAGGTaGAGGTGCAGGAAAGTCAGCAATGGGACTCGTCATGTTTCGGGT +
Preference number: 5 (lower is better)
Translates to: PSGEGVRGRSDCRVR*RCRKVSNGTRHVSG
Trigger: ACCCGAAACATGACGAGTCCCATTGCTGACTTTCCTGCACCTCCACCTTACTCTGCAGTCACTCCTCCCCCTGACGCCTTCTCCAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTACGGTACATGTCTATTTaGGGGTGCTCCTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLRYMSI*GCSWIF
Trigger: AAAAATCCAGGAGCACCCCAAAATAGACATGTACCG...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCTGCTTTGTGGCCCTaGGCCAACCCTGGTAGGACA +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPALWP*ANPGRT
Trigger: TGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp ATGGGACTCGTCATGTTTCGGGTTGGCGAGAAGGGGGTAGCTGGCTaGTTCACAGACCCTGGGAAGGGTTTGGCCGTTCTATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: MGLVMFRVGEKGVAG*FTDPGKGLAVLFMG
Trigger: CCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp AGAGCAGTCGAGGATCACTTCCACCCGGGGCAGTCCCGCATCTCCTaGTTCACTTTCCTGGATCACTCTCAACTCTCTGCCACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: RAVEDHFHPGQSRIS*FTFLDHSQLSATGD
Trigger: ATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAGATGCGGGACTGCCCCGGGTGGAAGTGATCCTCGACTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 90 bp TGGGTAAGACGGCGAGTGGATAGGATTATAGGCCACAGGAGGAGGTaGTCGGACATTGGAGGAGTACTTCCAACTGGCCGGGAGAGATGG +
Preference number: 5 (lower is better)
Translates to: WVRRRVDRIIGHRRR*SDIGGVLPTGRERW
Trigger: CCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCCTCCTGTGGCCTATAATCCTATCCACTCGCCGTCTTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGCTGCTCCTTGCCACCTaGCAATCTGAACCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GKHHPLDREETLLLLPKELLLAT*QSEPPG
Trigger: CCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCAG...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGACCCTGGGAAGGGTTaGGCCGTTCTATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTDPGKG*AVLFMG
Trigger: CCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGGCCAGCAATCGGACTaGAAACCCCTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTGQQSD*KPLWRR
Trigger: CCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGCC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCTGCTTGTGGTCCTTaGAAGGGACCAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTAACGP*KGPATF
Trigger: GAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS CCA 90 bp GGAGCCACTCCTGGAGACCAGACTGGGGAAACTGGAGTTACTGGTTaGGAGGATGAGGACTTGACTGCAGGTTTTGGAGCAACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GATPGDQTGETGVTG*EDEDLTAGFGATGG
Trigger: TCCTCCTGTTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTAACTCCAGTTTCCCCAGTCTGGTCTCCAGGAGTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCCTTGGAGTTGGGGTaGGGAGCATCCGTTAGAAGA +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPLELG*GASVRR
Trigger: TCTTCTAACGGATGCTCCCAACCCCAACTCCAAGGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGATTTGGGCTTACTTaGGGCTCTTTAAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGFGLT*GSLKVN
Trigger: GTTTACTTTTAAAGAGCCCAAAGTAAGCCCAAATCC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAGACAACGGTGCCCTTaGATGGGTTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTRQRCP*MGWMWG
Trigger: TCCCCACATCCAACCCATCAAAGGGCACCGTTGTCT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAGGTCCTTATGATATCTaGACTATGGATCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLGPYDI*TMDPRF
Trigger: AAATCTGGGATCCATAGTCAAGATATCATAAGGACC...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAAAAAATTCCCTGGGTTaGAAAGGCAGCTGGAATATT +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLKNSLG*KGSWNI
Trigger: AATATTCCAGCTGCCTTTCAAACCCAGGGAATTTTT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAAGAGGGAAGGAGAGTTaGCTGCCATCTCCTGGACGT +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTRGKES*LPSPGR
Trigger: ACGTCCAGGAGATGGCAGCAAACTCTCCTTCCCTCT...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp AGTCGGGACCACTTCTTTGGTTCTCAGCTAGGGGAACTTCAGTCTTaGCAGGGGCGAGGAAGAATTCTGTGCACTGGGTCTTTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: SRDHFFGSQLGELQS*QGRGRILCTGSLWP
Trigger: CGGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS TCA 90 bp TGGAGTGGGAGACTGAGCTCGAGCAGCGTGGGCCTGCACCGTGTCTaGATCGACCACATACTTCTCCATTCTCGACTGCCTTTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: WSGRLSSSSVGLHRV*IDHILLHSRLPFSK
Trigger: TTTGCTAAAAGGCAGTCGAGAATGGAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp TTTGGGGAGCCCTTTGGTAGCTCGGGCCTGTTTCTTCTTTCAAGCTaGCTGCACAGTCGGGACCACTTCTTTGGTTCTCAGCTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FGEPFGSSGLFLLSS*LHSRDHFFGSQLGE
Trigger: TTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 90 bp TGCTGCTTGTGGTCCTTTGAAGGGACCAGCCACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTAAGAAGGCTGGGCTATTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: CCLWSFEGTSHVQST*RPGRRVRRLGYFDG
Trigger: TCCATCAAAATAGCCCAGCCTTCTTACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp ACATTCGTAGGTGAGGCAGCATTCACTGGCCGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAATTGACCTTGACTGATGACTTCTGG +
Preference number: 5 (lower is better)
Translates to: TFVGEAAFTGRGGRA*FMARAELTLTDDFW
Trigger: CCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCGGCCAGTGAATGCTGCCTCACCTACGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp AGGGGAACTTCAGTCTTGACAGGGGCGAGGAAGAATTCTGTGCACTaGGTCTTTGTGGCCGGTCGAATCTGCAGGGTGGTACTTTCCACA +
Preference number: 5 (lower is better)
Translates to: RGTSVLTGARKNSVH*VFVAGRICRVVLST
Trigger: TGTGGAAAGTACCACCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 90 bp CGTGGTTCTCAGGCCATCGGTCTGGGCAGCATCTTGTTCTCTGCTTaGCGTTCCACCTACCTTGTCCTCTTCTTTTTGGGCTGTGATCTG +
Preference number: 5 (lower is better)
Translates to: RGSQAIGLGSILFSA*RSTYLVLFFLGCDL
Trigger: CAGATCACAGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAGAACCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp AGCAATGGGACTCGTCATGTTTCGGGTTGGCGAGAAGGGGGTAGCTaGCTGATTCACAGACCCTGGGAAGGGTTTGGCCGTTCTATTCAT +
Preference number: 5 (lower is better)
Translates to: SNGTRHVSGWREGGS*LIHRPWEGFGRSIH
Trigger: ATGAATAGAACGGCCAAACCCTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGTCCCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGCAGCATGAAGAGCTaGACGAGACAGACGAAGCTT +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGSMKS*TRQTKL
Trigger: AAGCTTCGTCTGTCTCGTCAAGCTCTTCATGCTGCC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTCCATCCTCTGGATGTTaGCTGTCTCAGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSPSSGC*LSQMSH
Trigger: GTGGGACATCTGAGACAGCAAACATCCAGAGGATGG...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAACAACAATGAAATTGTaGTGGGAGCCATATAGAGAA +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLTTMKL*WEPYRE
Trigger: TTCTCTATATGGCTCCCACAACAATTTCATTGTTGT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCCTGCTTTGTGGCCCTaGGCCAACCCTGGTAGGACA +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTPALWP*ANPGRT
Trigger: TGTCCTACCAGGGTTGGCCAAGGGCCACAAAGCAGG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGGCAGGCCTGGGACTCAGAGGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATACTACAGCAAATTTaGCCATGTAGACCACACATT +
Preference number: 5 (lower is better)
Translates to: RQAWDSEAGSAALEPTLLILQQI*PCRPHI
Trigger: AATGTGTGGTCTACATGGCAAAATTTGCTGTAGTAT...TAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCCTCTGAGTCCCAGGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS CCA 90 bp CCTGTTTCTTCTTTCAAGCTGCCTGCACAGTCGGGACCACTTCTTTaGTTCTCAGCTAGGGGAACTTCAGTCTTGACAGGGGCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVSSFKLPAQSGPLL*FSARGTSVLTGARK
Trigger: CTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGAAGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 90 bp GACCCTGGGAAGGGTTTGGCCGTTCTATTCATGGGGACCATCCTCTaGATGTTTGCTGTCTCAGATGTCCCACTGAAGCCATTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: DPGKGLAVLFMGTIL*MFAVSDVPLKPFCW
Trigger: CCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGGATGGTCCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCACGTTCAAAGTACTaGCAGGCCGGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPRSKY*QAGQEG
Trigger: ACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGCCAAGATCGCACCATaGCACTCCAGACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVAKIAP*HSRLGG
Trigger: CCCACCCAGTCTGGAGTGCAATGGTGCGATCTTGGC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTCCACTGAGGAATCTTaGAGGTGGGAAGGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSTEES*RWEGFA
Trigger: AGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGGA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp TCATGGGGACCATCCTCTGGATGTTTGCTGTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAACATGGCCAAGACCATGACTCACCT +
Preference number: 5 (lower is better)
Translates to: SWGPSSGCLLSQMSH*SHSVGEHGQDHDSP
Trigger: AGGTGAGTCATGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGGATGGTCCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp GTCCCGCATCTCCTGCTTCACTTTCCTGGATCACTCTCAACTCTCTaGCACTGGAGATCTGGATTATCTTGCTGGACCTCAGGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: VPHLLLHFPGSLSTL*HWRSGLSCWTSGKG
Trigger: ACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAGATGCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 90 bp GTCTGCTGTGATCTTTTTCCGAGCGTGGATCTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAAAGGATACCAGAGAAGGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VCCDLFPSVDLLPAL*LLMRRQRIPEKEVL
Trigger: AAGCACCTCCTTCTCTGGTATCCTTTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACGCTCGGAAAAAGATCACAGCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 90 bp GGTCTTTTGTTTGGCAGAGGAGCTTTGCATGAAATTACAAGCCTCTaGCCCCAAGCTGAGGTAGTCTTCTTCCGGTCCGGAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: GLLFGRGALHEITSL*PQAEVVFFRSGITS
Trigger: GGAGGTGATTCCGGACCGGAAGAAGACTACCTCAGCTTGGGGGCAGAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAACAAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTGCTCCTTGCCACCTaGCAATCTGAACCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLLLAT*QSEPPG
Trigger: CCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACAGCACAAGGGTTGCCATaGATGGAAACCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTAQGLP*METTSS
Trigger: AGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGC...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCACTGGATGGTCTTTaGATGAGCATTTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPLDGL*MSIWRE
Trigger: CTCTCTCCAAATGCTCATCAAAAGACCATCCAGTGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCTGTGCACTGGGTCTTaGTGGCCGGTCGAATCTGCA +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLCTGS*WPVESA
Trigger: TGCAGATTCGACCGGCCACAAAGACCCAGTGCACAG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCATTTGGGGAGCCCTTaGGTAGCTCGGGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHLGSP*VARACF
Trigger: GAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACCACCTCTGATTCGCTaGCACCAAGAAATGCTACTT +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTPPLIR*HQEMLL
Trigger: AAGTAGCATTTCTTGGTGCAAGCGAATCAGAGGTGG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCCACGTTCAAAGTACTaGCAGGCCGGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVPRSKY*QAGQEG
Trigger: ACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGGGGAGGCCATCCTTaGCATCTGGAGGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGGGHP*HLEVGK
Trigger: CTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGCGTCTCCATCCCCTaGGGTGTGGGTTGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGVSIP*GVGCSC
Trigger: ACAACTACAACCCACACCCAAGGGGATGGAGACGCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTAGTAAGTTGAGGACTTaGCTAGGCATTCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSSKLRT*LGILRD
Trigger: GTCCCTGAGAATGCCTAGCAAAGTCCTCAACTTACT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTTCTTAGAGCAATTTaGCCTGGTGTCTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLLRAI*PGVWIL
Trigger: CAGGATCCAGACACCAGGCAAAATTGCTCTAAGAAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp CCGGAATCACCTCCAGCTCCAGTGCCCCGTTTGCCTTCTGAATTTTaGAGGAGTGACAAGAGTTCAGGATTTGGGCTTACTTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: PESPPAPVPRLPSEF*RSDKSSGFGLTLGS
Trigger: AGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGTCACTCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTGATTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 90 bp GAAGGGTTTGGCCGTTCTATTCATGGGGACCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACTGAAGCCATTCTGTTGGGGAACATG +
Preference number: 5 (lower is better)
Translates to: EGFGRSIHGDHPLDV*CLRCPTEAILLGNM
Trigger: CATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGGATGGTCCCCATGAATAGAACGGCCAAACCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp TCTGCGTTCTTACCGACTCTTCCTCCTTTCTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCTGGGCAGCATCTTGTTCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SAFLPTLPPFFGKKS*FSGHRSGQHLVLCL
Trigger: CAAGCAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAGTCGGTAAGAACGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp GCTTGCTTCATGGCCAGGGCTGAATTGACCTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCATCTGGAGGTTGGAAAGTAAACAAG +
Preference number: 5 (lower is better)
Translates to: ACFMARAELTLTDDF*GRPSFASGGWKVNK
Trigger: CTTGTTTACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp GGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCTTCCCAAGGAGGCACAAGGGTTGCCATaGATGGAAACCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: GKHHPLDREETLLLLPKEAQGLP*METTSS
Trigger: AGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGC...CTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATGCCACGCGTCCTCTTaGGGAGTCAGGCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTCHASS*GVRHLG
Trigger: CCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTCAAAGTTCACAACTaGTGTGTTGTCGTCAACGTC +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVKVHN*CVVVNV
Trigger: GACGTTGACGACAACACACAAGTTGTGAACTTTGAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACC +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTTEAIL*GNMAKT
Trigger: GGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACCATCCTCTGGATGTTaGCTGTCTCAGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIPSSGC*LSQMSH
Trigger: GTGGGACATCTGAGACAGCAAACATCCAGAGGATGG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGCTGCTTGTGGTCCTTaGAAGGGACCAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCAACGP*KGPATF
Trigger: GAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGAGGTGCTCGGACATaGGAGGAGTACTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGGART*EEYFQL
Trigger: CAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTTTGCATCTGGAGGTaGGAAAGTAAACAAGGATGC +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLCIWR*ESKQGC
Trigger: GCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGGGGGAGGCCATCCTTaGCATCTGGAGGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVGGGHP*HLEVGK
Trigger: CTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGCGTCTCCATCCCCTaGGGTGTGGGTTGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGVSIP*GVGCSC
Trigger: ACAACTACAACCCACACCCAAGGGGATGGAGACGCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTTTACAAGGTAACCTaGCCTGAATTATCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVYKVT*PELSWS
Trigger: GGACCAGGATAATTCAGGCAAGGTTACCTTGTAAAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGTGCACTGTGGGAATTaGTTCAACAGAAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSVHCGN*FNRNQQ
Trigger: TTGCTGGTTTCTGTTGAACAAATTCCCACAGTGCAC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS GCA 90 bp GTTGGGGAACATGGCCAAGACCATGACTCACCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTCTTACCGACTCTTCCTCCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VGEHGQDHDSPRCSF*SQSSAFLPTLPPFF
Trigger: AAAGAAAGGAGGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGGTGAGTCATGGTCTTGGCCATGTTCCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp CATCTCCTGCTTCACTTTCCTGGATCACTCTCAACTCTCTGCCACTaGAGATCTGGATTATCTTGCTGGACCTCAGGAAAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: HLLLHFPGSLSTLCH*RSGLSCWTSGKGLL
Trigger: AAGCAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 90 bp CTCATTGGATGGTCCCACTGCACCAGGCTGAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTTGGGTGTGTAATTCTGACTGGCTAC +
Preference number: 5 (lower is better)
Translates to: LIGWSHCTRLNSIDC*CGNCWFGCVILTGY
Trigger: GTAGCCAGTCAGAATTACACACCCAAACCAACAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACATTTGGGGAGCCCTTaGGTAGCTCGGGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTHLGSP*VARACF
Trigger: GAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCCTTGGAGTTGGGGTaGGGAGCATCCGTTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPLELG*GASVRR
Trigger: TCTTCTAACGGATGCTCCCAACCCCAACTCCAAGGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTCACAACTTGTGTGTaGTCGTCAACGTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTFTTCV*SSTSDN
Trigger: ATTGTCTGACGTTGACGACAACACACAAGTTGTGAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACC +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVTEAIL*GNMAKT
Trigger: GGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGGCCAGCAATCGGACTaGAAACCCCTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTGQQSD*KPLWRR
Trigger: CCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGCC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSIFLFF*LALRSS
Trigger: AGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATAT...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGTCGTGCTTCTCCTTTaGGCCTCCTGCAATATTCCT +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIVVLLL*ASCNIP
Trigger: AGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGAC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRAELT*TDDFWG
Trigger: CCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACACTTGATTTTGGGTTGTaGCATGGCCTTGATTATTGC +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTLDFGL*HGLDYC
Trigger: GCAATAATCAAGGCCATGCAACAACCCAAAATCAAG...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAGAGGGAAGGAGAGTTaGCTGCCATCTCCTGGACGT +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVRGKES*LPSPGR
Trigger: ACGTCCAGGAGATGGCAGCAAACTCTCCTTCCCTCT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGCGCCCACTCTCCTTTaGATGAGCATTTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVAPTLL*MSIWRE
Trigger: CTCTCTCCAAATGCTCATCAAAAGGAGAGTGGGCGC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS GCA 90 bp TGGTGTGGAAACTGTTGGTTTGGGTGTGTAATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAAGGGACCAGCCACGTTCAAAGTACT +
Preference number: 5 (lower is better)
Translates to: WCGNCWFGCVILTGY*CLWSFEGTSHVQST
Trigger: AGTACTTTGAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAATTACACACCCAAACCAACAGTTTCCACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGCAGCATGAAGAGCTaGACGAGACAGACGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGSMKS*TRQTKL
Trigger: AAGCTTCGTCTGTCTCGTCAAGCTCTTCATGCTGCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGCGTTCCACCTACCTaGTCCTCTTCTTTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGVPPT*SSSFWA
Trigger: AGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCATCTTGTTCTCTGCTaGGCGTTCCACCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVHLVLC*AFHLPC
Trigger: ACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTEAIL*GNMAKT
Trigger: GGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCATCCTCTGGATGTTaGCTGTCTCAGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPSSGC*LSQMSH
Trigger: GTGGGACATCTGAGACAGCAAACATCCAGAGGATGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGGAGGGGTCTTTTGTTaGGCAGAGGAGCTTTGCATG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCGGVFC*AEELCM
Trigger: CATGCAAAGCTCCTCTGCCAAACAAAAGACCCCTCC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCRAELT*TDDFWG
Trigger: CCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCATGGCCAGGGCTGAATaGACCTTGACTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVMARAE*TLTDDF
Trigger: GAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCAT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGGCTGATTCTTGCTTaGGCGAGGTGGGAATGCCCA +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRLILA*ARWECP
Trigger: TGGGCATTCCCACCTCGCCAAAGCAAGAATCAGCCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTTCAAGATAAGGCCTaGGTCACTTGCACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVFQDKA*VTCTLA
Trigger: TGCCAGGGTGCAAGTGACCAAGGCCTTATCTTGAAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGGTGAGAGAATAGAATaGCAAGGAACGTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIGERIE*QGTWEK
Trigger: CTTCTCCCACGTTCCTTGCAATTCTATTCTCTCACC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTGGTTGTTGCATGGCCTaGATTATTGCACCAAATAAA +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSGCCMA*IIAPNK
Trigger: TTTATTTGGTGCAATAATCAAGGCCATGCAACAACC...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp TCTCCTTTTGGCCTCCTGCAATATTCCTGTTCTTTTTGCTGGCACTaGGATCCTCTCATCTCGGGAAGCTATTCGCTCAGACGAATCGTA +
Preference number: 5 (lower is better)
Translates to: SPFGLLQYSCSFCWH*DPLISGSYSLRRIV
Trigger: TACGATTCGTCTGAGCGAATAGCTTCCCGAGATGAGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATATTGCAGGAGGCCAAAAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 90 bp GCTTCACTTTCCTGGATCACTCTCAACTCTCTGCCACTGGAGATCTaGATTATCTTGCTGGACCTCAGGAAAGGGTCTGCTTTCTCATTA +
Preference number: 5 (lower is better)
Translates to: ASLSWITLNSLPLEI*IILLDLRKGSAFSL
Trigger: TAATGAGAAAGCAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCGAGACAGACGAAGCTaGGGTGCGGTAGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRDRRS*GAVEDA
Trigger: CGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCCGAGACAGACGAAGCTaGGGTGCGGTAGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRDRRS*GAVEDA
Trigger: CGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCG...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCGAGACAGACGAAGCTaGGGTGCGGTAGAGGATGCG +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVRDRRS*GAVEDA
Trigger: CGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTGCTCCTTGCCACCTaGCAATCTGAACCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLLLAT*QSEPPG
Trigger: CCCTGGGGGTTCAGATTGCAAGGTGGCAAGGAGCAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAGATCTGCACAAGGGTaGCCATTGATGGAAACCACT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRSAQG*PLMETT
Trigger: AGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCCCACTGGATGGTCTTTaGATGAGCATTTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVPLDGL*MSIWRE
Trigger: CTCTCTCCAAATGCTCATCAAAAGACCATCCAGTGG...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTGCCACGCGTCCTCTTaGGGAGTCAGGCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVCHASS*GVRHLG
Trigger: CCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGAGATCTGGATTATCTaGCTGGACCTCAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCEIWII*LDLRKG
Trigger: CCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTCAAAGTTCACAACTaGTGTGTTGTCGTCAACGTC +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVKVHN*CVVVNV
Trigger: GACGTTGACGACAACACACAAGTTGTGAACTTTGAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTCTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTLFLLS*VRSRGS
Trigger: AGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAG...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGACCCTGGGAAGGGTTaGGCCGTTCTATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSDPGKG*AVLFMG
Trigger: CCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGTCGTGCTTCTCCTTTaGGCCTCCTGCAATATTCCT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCVVLLL*ASCNIP
Trigger: AGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGAC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAACAAGAGTTCAGGATTaGGGCTTACTTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGITRVQD*GLLWAL
Trigger: AAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATTTGGCAGAGGAGCTTaGCATGAAATTACAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIFGRGA*HEITSL
Trigger: GAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGGAGGGGTCTTTTGTTaGGCAGAGGAGCTTTGCATG +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFGGVFC*AEELCM
Trigger: CATGCAAAGCTCCTCTGCCAAACAAAAGACCCCTCC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATGGGAGGATGAGGACTaGACTGCAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTWEDED*TAGFGA
Trigger: TGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCACGTTCAAAGTACTaGCAGGCCGGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVPRSKY*QAGQEG
Trigger: ACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGCCAAGATCGCACCATaGCACTCCAGACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNAKIAP*HSRLGG
Trigger: CCCACCCAGTCTGGAGTGCAATGGTGCGATCTTGGC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTGCATGTGTCATGGGATaGATGAAGCAGCTGCTTAAC +
Preference number: 5 (lower is better)
Translates to: MFLGWKASSTRPRGDFAAACVMG*MKQLLN
Trigger: GTTAAGCAGCTGCTTCATCAATCCCATGACACATGC...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCACTCTGGCAGGTGTCTaGTCTCAACCATTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVTLAGV*SQPLAS
Trigger: TGAAGCTAATGGTTGAGACAAGACACCTGCCAGAGT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGGGAGGGAGGCTGACGTCTGGAGGTCTAACTCTCCCTTCTGTCACACTGACATTTGAAGTACAAAGTTaGACATGCTCTAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: MGGRLTSGGLTLPSVTLTFEVQS*TCSRVT
Trigger: TGTCACTCTAGAGCATGTCAAACTTTGTACTTCAAA...TGTCAGTGTGACAGAAGGGAGAGTTAGACCTCCAGACGTCAGCCTCCCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGTGTCACAGGCATCTTaGTGTCCCCCAGAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFVSQAS*CPPESN
Trigger: ATTGGACTCTGGGGGACACAAAGATGCCTGTGACAC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATTCTCCCCTGTATACTaGGGATGCACTTTATTGGCT +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIFSPVY*GCTLLA
Trigger: AGCCAATAAAGTGCATCCCAAGTATACAGGGGAGAA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTATCAGGGCCCAAATTTaGTGCTCAGCTAATGTTAGC +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTIRAQI*CSANVS
Trigger: GCTAACATTAGCTGAGCACAAAATTTGGGCCCTGAT...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAAGAGACAGTAGGCTCTaGGTGAATCAGTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIRDSRL*VNQFGK
Trigger: TTTCCCAAACTGATTCACCAAGAGCCTACTGTCTCT...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTGTGCACTGTGGGAATTaGTTCAACAGAAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTVHCGN*FNRNQQ
Trigger: TTGCTGGTTTCTGTTGAACAAATTCCCACAGTGCAC...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GGCAGGCAGCGCGGCCCTAGAGCCCACACTCTTAATCACTACCAATGTACTTCTTATTTATACTCATTCTaGATTAGAAGCAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRQRGPRAHTLNHYQCTSYLYSF*IRSRGS
Trigger: TGACCCCCTGCTTCTAATCAAGAATGAGTATAAATA...AGAAGTACATTGGTAGTGATTAAGAGTGTGGGCTCTAGGGCCGCGCTGCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATACAGATCAGTCATTCATaGACCACATGGCATCAAACC +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIQISHS*TTWHQT
Trigger: GGTTTGATGCCATGTGGTCAATGAATGACTGATCTG...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS GCA 90 bp TGTTATGCTTTCCATGAGCTTGATGACTTCAGGGTAGGTGAGATCTaGACAAGGGTTGCCATTGATGGAAACCACTTCATCTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: CYAFHELDDFRVGEI*TRVAIDGNHFISLT
Trigger: TGTGAGGGAGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCTCACCTACCCTGAAGTCATCAAGCTCATGGAAAGCATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000448416.6
ENST00000610556.4
CDS GCA 90 bp GCCACTGGAGATCTGGATTATCTTGCTGGACCTCAGGAAAGGGTCTaGTTTCTCATTAGTAGGGATCGAATTTATGTGGACAATCCTGTC +
Preference number: 5 (lower is better)
Translates to: ATGDLDYLAGPQERV*FLISRDRIYVDNPV
Trigger: GACAGGATTGTCCACATAAATTCGATCCCTACTAATGAGAAAGCAGACCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCACTGGATGGTCTTTaGATGAGCATTTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPLDGL*MSIWRE
Trigger: CTCTCTCCAAATGCTCATCAAAAGACCATCCAGTGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTGTGCACTGGGTCTTaGTGGCCGGTCGAATCTGCA +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLCTGS*WPVESA
Trigger: TGCAGATTCGACCGGCCACAAAGACCCAGTGCACAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTGTGCACTGGGTCTTaGTGGCCGGTCGAATCTGCA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVLCTGS*WPVESA
Trigger: TGCAGATTCGACCGGCCACAAAGACCCAGTGCACAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCATTTGGGGAGCCCTTaGGTAGCTCGGGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNHLGSP*VARACF
Trigger: GAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTTGGGAGTCAGGCATTaGGGGAGCCCTTTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLGVRH*GSPLVA
Trigger: AGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCCCTTGGAGTTGGGGTaGGGAGCATCCGTTAGAAGA +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSPLELG*GASVRR
Trigger: TCTTCTAACGGATGCTCCCAACCCCAACTCCAAGGG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAACATCAACACCCCCTaGGAGTTGGGGTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSNINTP*ELGLGA
Trigger: TGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGTT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCCACCTCTGATTCGCTaGCACCAAGAAATGCTACTT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCPPLIR*HQEMLL
Trigger: AAGTAGCATTTCTTGGTGCAAGCGAATCAGAGGTGG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACATCTTGTTCTCTGCTaGGCGTTCCACCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTHLVLC*AFHLPC
Trigger: ACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGACCCTGGGAAGGGTTaGGCCGTTCTATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNDPGKG*AVLFMG
Trigger: CCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGGCCAGCAATCGGACTaGAAACCCCTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNGQQSD*KPLWRR
Trigger: CCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGCC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAGTCGTGCTTCTCCTTTaGGCCTCCTGCAATATTCCT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTVVLLL*ASCNIP
Trigger: AGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGAC...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGCTGCTTGTGGTCCTTaGAAGGGACCAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLAACGP*KGPATF
Trigger: GAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTTTTCTTGCCCATTTaGGAGGGCTGTGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCFFLPI*EGCAAD
Trigger: ATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGGGGAGGCCATCCTTaGCATCTGGAGGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVGGGHP*HLEVGK
Trigger: CTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCATAGGCCTTCTGGGTTaGAGGAATATAGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVIGLLG*RNIGQS
Trigger: AGACTGTCCTATATTCCTCAAACCCAGAAGGCCTAT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGCGTCTCCATCCCCTaGGGTGTGGGTTGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVGVSIP*GVGCSC
Trigger: ACAACTACAACCCACACCCAAGGGGATGGAGACGCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTCTAAAGAAGCACCACTaGTTACATAGGCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: MFLGWKASSTRPRGDFAALKKHH*LHRLLW
Trigger: CCACAGAAGCCTATGTAACAAGTGGTGCTTCTTTAG...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGCATGTGTCATGGGATaGATGAAGCAGCTGCTTAAC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCACVMG*MKQLLN
Trigger: GTTAAGCAGCTGCTTCATCAATCCCATGACACATGC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTTGAGCCCTAATAGGTaGGCCCTTTCCAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVLSPNR*ALSNVY
Trigger: ATACACATTGGAAAGGGCCAACCTATTAGGGCTCAA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTTTGAGCCCTAATAGGTaGGCCCTTTCCAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: MFLGWKASSTRPRGDFAALSPNR*ALSNVY
Trigger: ATACACATTGGAAAGGGCCAACCTATTAGGGCTCAA...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATAGTTGTGGATATTGTTTaGGAGAACTTCCACCCTCTT +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIVVDIV*ENFHPL
Trigger: AAGAGGGTGGAAGTTCTCCAAAACAATATCCACAAC...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAGGGAGAGCACAGGTTaGGATGCCAGACAAATATCT +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVRESTG*DARQIS
Trigger: AGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATCTAAAAAGGCCAGGTaGCTGACCCTTTGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTSKKAR*LTLCPR
Trigger: CCTAGGACAAAGGGTCAGCAACCTGGCCTTTTTAGA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCTCTGATTTCGAATCTTaGCAACTTGTAAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVSDFES*QLVRAA
Trigger: AGCAGCCCTTACAAGTTGCAAAGATTCGAAATCAGA...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000448416.6
CDS-3UTR CAA 90 bp ATGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTTGCTGCTTCTGATTTCGAATCTTaGCAACTTGTAAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: MFLGWKASSTRPRGDFAASDFES*QLVRAA
Trigger: AGCAGCCCTTACAAGTTGCAAAGATTCGAAATCAGA...AGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp ACTCTAGGACCCTGTAGGAGTCTAGCTTTCTCCCCTGTATACTTGGGATGCACTTCTTTTGATGAGCATTaGGAGAGAGTCTGTTATGCT +
Preference number: 5 (lower is better)
Translates to: TLGPCRSLAFSPVYLGCTSFDEH*ERVCYA
Trigger: AGCATAACAGACTCTCTCCAAATGCTCATCAAAAGA...AGTGCATCCCAAGTATACAGGGGAGAAAGCTAGACTCCTACAGGGTCCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTGGGAGTCAGGCATTaGGGGAGCCCTTTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVLGVRH*GSPLVA
Trigger: AGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGCCACGCGTCCTCTTaGGGAGTCAGGCATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVCHASS*GVRHLG
Trigger: CCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCCTTGGAGTTGGGGTaGGGAGCATCCGTTAGAAGA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVPLELG*GASVRR
Trigger: TCTTCTAACGGATGCTCCCAACCCCAACTCCAAGGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAACATCAACACCCCCTaGGAGTTGGGGTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNNINTP*ELGLGA
Trigger: TGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGTT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTCCACCTCTGATTCGCTaGCACCAAGAAATGCTACTT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFPPLIR*HQEMLL
Trigger: AAGTAGCATTTCTTGGTGCAAGCGAATCAGAGGTGG...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTGTCAAAGTTCACAACTaGTGTGTTGTCGTCAACGTC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCVKVHN*CVVVNV
Trigger: GACGTTGACGACAACACACAAGTTGTGAACTTTGAC...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLFLLS*VRSRGS
Trigger: AGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACC +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSTEAIL*GNMAKT
Trigger: GGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTACAAGAGTTCAGGATTaGGGCTTACTTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCTRVQD*GLLWAL
Trigger: AAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTTTGGCAGAGGAGCTTaGCATGAAATTACAAGCCTC +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCFGRGA*HEITSL
Trigger: GAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAGGAGGAGGGGTCTTTaGTTTGGCAGAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRRRGL*FGRGAL
Trigger: CAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGACAACGGTGCCCTTaGATGGGTTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVRQRCP*MGWMWG
Trigger: TCCCCACATCCAACCCATCAAAGGGCACCGTTGTCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGGAGGTGCTCGGACATaGGAGGAGTACTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLGGART*EEYFQL
Trigger: CAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTTTTTCTTGCCCATTTaGGAGGGCTGTGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFFFLPI*EGCAAD
Trigger: ATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAAA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGGCTGATTCTTGCTTaGGCGAGGTGGGAATGCCCA +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRLILA*ARWECP
Trigger: TGGGCATTCCCACCTCGCCAAAGCAAGAATCAGCCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTGAGAACTTTGGCCTaGGTGCCACAAAATAAGATG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLRTLA*VPQNKM
Trigger: CATCTTATTTTGTGGCACCAAGGCCAAAGTTCTCAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTGTGACACCACTTTTCTaGGCTGAGAACTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFVTPLF*AENFGL
Trigger: AAGGCCAAAGTTCTCAGCCAAGAAAAGTGGTGTCAC...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTCTAAAGAAGCACCACTaGTTACATAGGCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCLKKHH*LHRLLW
Trigger: CCACAGAAGCCTATGTAACAAGTGGTGCTTCTTTAG...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGTAAGTTGAGGACTTaGCTAGGCATTCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFSKLRT*LGILRD
Trigger: GTCCCTGAGAATGCCTAGCAAAGTCCTCAACTTACT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp TCCTTTGCATCTGGAGGTTGGAAAGTAAACAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATGACATCTAATGCATTGAGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SFASGGWKVNKDALS*YGWCFMTSNALRGF
Trigger: GAAACCCCTCAATGCATTAGATGTCATGAAGCACCAACCGTATCAGCTCAATGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCAGAAGGGCAATGCTTTaGCATTTAGATTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVRRAML*HLDFAS
Trigger: GGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCT...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGGCGTTCCACCTACCTaGTCCTCTTCTTTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVGVPPT*SSSFWA
Trigger: AGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGGCGTTCCACCTACCTaGTCCTCTTCTTTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLGVPPT*SSSFWA
Trigger: AGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCCATCCTCTGGATGTTaGCTGTCTCAGATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVPSSGC*LSQMSH
Trigger: GTGGGACATCTGAGACAGCAAACATCCAGAGGATGG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGACCCTGGGAAGGGTTaGGCCGTTCTATTCATGGGG +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVDPGKG*AVLFMG
Trigger: CCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGCCAGCAATCGGACTaGAAACCCCTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGQQSD*KPLWRR
Trigger: CCTTCTCCAGAGGGGTTTCAAGTCCGATTGCTGGCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCIFLFF*LALRSS
Trigger: AGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATAT...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CCAATCTTCTCATTTGACAGATGGGGACCCCTGAACCCAGAATCTATTCCTGTCGGATTTGGGCTTACTTaGGGCTCTTTAAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: PIFSFDRWGPLNPESIPVGFGLT*GSLKVN
Trigger: GTTTACTTTTAAAGAGCCCAAAGTAAGCCCAAATCC...GACAGGAATAGATTCTGGGTTCAGGGGTCCCCATCTGTCAAATGAGAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGGAGGAGGGGTCTTTaGTTTGGCAGAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRRRGL*FGRGAL
Trigger: CAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTAGGAGGAGGGGTCTTTaGTTTGGCAGAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVRRRGL*FGRGAL
Trigger: CAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTGGGAGGATGAGGACTaGACTGCAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVWEDED*TAGFGA
Trigger: TGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGTGGGAGGATGAGGACTaGACTGCAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVWEDED*TAGFGA
Trigger: TGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCA...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAGACAACGGTGCCCTTaGATGGGTTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRQRCP*MGWMWG
Trigger: TCCCCACATCCAACCCATCAAAGGGCACCGTTGTCT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGCTGCTTGTGGTCCTTaGAAGGGACCAGCCACGTTC +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVAACGP*KGPATF
Trigger: GAACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTTTGCATCTGGAGGTaGGAAAGTAAACAAGGATGC +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLCIWR*ESKQGC
Trigger: GCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGGGGAGGCCATCCTTaGCATCTGGAGGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGGGHP*HLEVGK
Trigger: CTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTGAGAACTTTGGCCTaGGTGCCACAAAATAAGATG +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLRTLA*VPQNKM
Trigger: CATCTTATTTTGTGGCACCAAGGCCAAAGTTCTCAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AAAAAGGCCAGGTTGCTGACCCTTTGTCCTAGGACAGTGTGGAAAGGAGGGATATTTGAAGTACAAAGTTaGACATGCTCTAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: KKARLLTLCPRTVWKGGIFEVQS*TCSRVT
Trigger: TGTCACTCTAGAGCATGTCAAACTTTGTACTTCAAA...TATCCCTCCTTTCCACACTGTCCTAGGACAAAGGGTCAGCAACCTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATTCTCCCCTGTATACTaGGGATGCACTTTATTGGCT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTFSPVY*GCTLLA
Trigger: AGCCAATAAAGTGCATCCCAAGTATACAGGGGAGAA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTAGTTACTTAGCCTCTTaGTGCCTCAGAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVSYLAS*CLRISS
Trigger: AGATGAGATTCTGAGGCACAAAGAGGCTAAGTAACT...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTCCACTGAGGAATCTTaGAGGTGGGAAGGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSSTEES*RWEGFA
Trigger: AGCAAACCCTTCCCACCTCAAAGATTCCTCAGTGGA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAGATCTGCACAAGGGTaGCCATTGATGGAAACCACT +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSRSAQG*PLMETT
Trigger: AGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp CTCTATGGATCAGCCAACAAGGAAGTATTCACACTCACCTGTGTGTGTGTGTGTTCTTTTGATGAGCATTaGGAGAGAGTCTGTTATGCT +
Preference number: 5 (lower is better)
Translates to: LYGSANKEVFTLTCVCVCSFDEH*ERVCYA
Trigger: AGCATAACAGACTCTCTCCAAATGCTCATCAAAAGA...ACACACACACACACAGGTGAGTGTGAATACTTCCTTGTTGGCTGATCCATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTTGGGAGTCAGGCATTaGGGGAGCCCTTTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLGVRH*GSPLVA
Trigger: AGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGAGATCTGGATTATCTaGCTGGACCTCAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLEIWII*LDLRKG
Trigger: CCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAACATCAACACCCCCTaGGAGTTGGGGTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSNINTP*ELGLGA
Trigger: TGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGTT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGTCGTGCTTCTCCTTTaGGCCTCCTGCAATATTCCT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNVVLLL*ASCNIP
Trigger: AGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGAC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAGGAGGAGGGGTCTTTaGTTTGGCAGAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRRRGL*FGRGAL
Trigger: CAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGACAACGGTGCCCTTaGATGGGTTGGATGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRQRCP*MGWMWG
Trigger: TCCCCACATCCAACCCATCAAAGGGCACCGTTGTCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGAGGTGCTCGGACATaGGAGGAGTACTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGGART*EEYFQL
Trigger: CAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGAGGTGCTCGGACATaGGAGGAGTACTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGGART*EEYFQL
Trigger: CAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKRAELT*TDDFWG
Trigger: CCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATGGCCAGGGCTGAATaGACCTTGACTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNMARAE*TLTDDF
Trigger: GAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATGGCCAGGGCTGAATaGACCTTGACTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLMARAE*TLTDDF
Trigger: GAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGGCTGATTCTTGCTTaGGCGAGGTGGGAATGCCCA +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRLILA*ARWECP
Trigger: TGGGCATTCCCACCTCGCCAAAGCAAGAATCAGCCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTTCAAGATAAGGCCTaGGTCACTTGCACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFQDKA*VTCTLA
Trigger: TGCCAGGGTGCAAGTGACCAAGGCCTTATCTTGAAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTTCAAGATAAGGCCTaGGTCACTTGCACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVFQDKA*VTCTLA
Trigger: TGCCAGGGTGCAAGTGACCAAGGCCTTATCTTGAAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCTTCTTAGAGCAATTTaGCCTGGTGTCTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLLRAI*PGVWIL
Trigger: CAGGATCCAGACACCAGGCAAAATTGCTCTAAGAAG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTGGTTGTTGCATGGCCTaGATTATTGCACCAAATAAA +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVGCCMA*IIAPNK
Trigger: TTTATTTGGTGCAATAATCAAGGCCATGCAACAACC...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTTGAACCAAAATGCTaGATTTTGGGTTGTTGCATG +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVLEPKC*ILGCCM
Trigger: CATGCAACAACCCAAAATCAAGCATTTTGGTTCAAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAAGTTACTTAGCCTCTTaGTGCCTCAGAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTSYLAS*CLRISS
Trigger: AGATGAGATTCTGAGGCACAAAGAGGCTAAGTAACT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTCTAAAAAGGCCAGGTaGCTGACCCTTTGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLSKKAR*LTLCPR
Trigger: CCTAGGACAAAGGGTCAGCAACCTGGCCTTTTTAGA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS TCA 90 bp TTTCTCATTAGTAGGGATCGAATTTATGTGGACAATCCTGTCATGTaGCAAGTTAGGGTCTGGGTCAGGAGACTTAGATTTTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLISRDRIYVDNPVM*QVRVWVRRLRFFSS
Trigger: GGAGCTGAAAAATCTAAGTCTCCTGACCCAGACCCTAACTTGTCACATGACAGGATTGTCCACATAAATTCGATCCCTACTAATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 90 bp CTCAGGGACTCAAGAAACACTGCAAACAATTCATTTCAAGCAAAGTaGACACTCAGCTTCAGCTACAAGATTACTCTTCCACAACAGATG +
Preference number: 5 (lower is better)
Translates to: LRDSRNTANNSFQAK*TLSFSYKITLPQQM
Trigger: CATCTGTTGTGGAAGAGTAATCTTGTAGCTGAAGCTGAGTGTCCACTTTGCTTGAAATGAATTGTTTGCAGTGTTTCTTGAGTCCCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACGCACAAGGGTTGCCATaGATGGAAACCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNAQGLP*METTSS
Trigger: AGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGC...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTGCACAAGGGTTGCCATaGATGGAAACCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVAQGLP*METTSS
Trigger: AGATGAAGTGGTTTCCATCAATGGCAACCCTTGTGC...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACAGATCTGCACAAGGGTaGCCATTGATGGAAACCACT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNRSAQG*PLMETT
Trigger: AGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTAGAAGGGCAATGCTTTaGCATTTAGATTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFRRAML*HLDFAS
Trigger: GGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCCACCTCTGATTCGCTaGCACCAAGAAATGCTACTT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNPPLIR*HQEMLL
Trigger: AAGTAGCATTTCTTGGTGCAAGCGAATCAGAGGTGG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGCGTTCCACCTACCTaGTCCTCTTCTTTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGVPPT*SSSFWA
Trigger: AGCCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACATCTTGTTCTCTGCTaGGCGTTCCACCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKHLVLC*AFHLPC
Trigger: ACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGAGGGGTCTTTTGTTaGGCAGAGGAGCTTTGCATG +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGGVFC*AEELCM
Trigger: CATGCAAAGCTCCTCTGCCAAACAAAAGACCCCTCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTGGGAGGATGAGGACTaGACTGCAGGTTTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVWEDED*TAGFGA
Trigger: TGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATGACATCTAATGCATaGAGGGGTTTCTTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFMTSNA*RGFFPF
Trigger: AAAGGGAAAGAAACCCCTCAATGCATTAGATGTCAT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACAATGACATCTAATGCATaGAGGGGTTTCTTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTMTSNA*RGFFPF
Trigger: AAAGGGAAAGAAACCCCTCAATGCATTAGATGTCAT...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSRAELT*TDDFWG
Trigger: CCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAATGGCCAGGGCTGAATaGACCTTGACTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKMARAE*TLTDDF
Trigger: GAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCAT...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCGTGACACCACTTTTCTaGGCTGAGAACTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLVTPLF*AENFGL
Trigger: AAGGCCAAAGTTCTCAGCCAAGAAAAGTGGTGTCAC...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTGCTGAAACCACATTaGCCACAATGGATTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLLKPH*PQWIPG
Trigger: TCCAGGAATCCATTGTGGCAAATGTGGTTTCAGCAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTACTCTGGCAGGTGTCTaGTCTCAACCATTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVTLAGV*SQPLAS
Trigger: TGAAGCTAATGGTTGAGACAAGACACCTGCCAGAGT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp CATGTGTCTTCTGCTCTTAGGAGGGTTTACTGTGAAAGAGCCACACAGAGTGTTCTGAAATTAAGTAAGTaGAGGACTTTGCTAGGCATT +
Preference number: 5 (lower is better)
Translates to: HVSSALRRVYCERATQSVLKLSK*RTLLGI
Trigger: AATGCCTAGCAAAGTCCTCAACTTACTTAATTTCAG...AACACTCTGTGTGGCTCTTTCACAGTAAACCCTCCTAAGAGCAGAAGACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGTGTCACAGGCATCTTaGTGTCCCCCAGAGTCCAAT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSVSQAS*CPPESN
Trigger: ATTGGACTCTGGGGGACACAAAGATGCCTGTGACAC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTTTTCTCTTTATTCAATaGCCTCTGAGTAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFFLFIQ*PLSSAV
Trigger: CACAGCACTACTCAGAGGCAATTGAATAAAGAGAAA...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTTGAACCAAAATGCTaGATTTTGGGTTGTTGCATG +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLEPKC*ILGCCM
Trigger: CATGCAACAACCCAAAATCAAGCATTTTGGTTCAAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGGGAGAGCACAGGTTaGGATGCCAGACAAATATCT +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRESTG*DARQIS
Trigger: AGATATTTGTCTGGCATCCAAACCTGTGCTCTCCCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGAAACCAGCAAAATGTaGAGCTTCCCTTCGCCATTA +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSETSKM*SFPSPL
Trigger: TAATGGCGAAGGGAAGCTCAACATTTTGCTGGTTTC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCAGATCAGTCATTCATaGACCACATGGCATCAAACC +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSQISHS*TTWHQT
Trigger: GGTTTGATGCCATGTGGTCAATGAATGACTGATCTG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGAGATCTGGATTATCTaGCTGGACCTCAGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVEIWII*LDLRKG
Trigger: CCCTTTCCTGAGGTCCAGCAAGATAATCCAGATCTC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTGTCCTCTTCTTTTaGGGCTGTGATCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLVLFF*GCDLIH
Trigger: ATGGATCAGATCACAGCCCAAAAAGAAGAGGACAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTTGTCCTCTTCTTTTaGGGCTGTGATCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLVLFF*GCDLIH
Trigger: ATGGATCAGATCACAGCCCAAAAAGAAGAGGACAAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTCTTGTCCTCTTCTTTTaGGGCTGTGATCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVLVLFF*GCDLIH
Trigger: ATGGATCAGATCACAGCCCAAAAAGAAGAGGACAAG...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTTGTCCTCTTCTTTTaGGGCTGTGATCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLVLFF*GCDLIH
Trigger: ATGGATCAGATCACAGCCCAAAAAGAAGAGGACAAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCATCTTGTTCTCTGCTaGGCGTTCCACCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVHLVLC*AFHLPC
Trigger: ACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLFLLS*VRSRGS
Trigger: AGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTACAAGAGTTCAGGATTaGGGCTTACTTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVTRVQD*GLLWAL
Trigger: AAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTTGGCAGAGGAGCTTaGCATGAAATTACAAGCCTC +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLFGRGA*HEITSL
Trigger: GAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTTGGCAGAGGAGCTTaGCATGAAATTACAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFGRGA*HEITSL
Trigger: GAGGCTTGTAATTTCATGCAAAGCTCCTCTGCCAAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTTTTCTTGCCCATTTaGGAGGGCTGTGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKFFLPI*EGCAAD
Trigger: ATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTTTGCATCTGGAGGTaGGAAAGTAAACAAGGATGC +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLCIWR*ESKQGC
Trigger: GCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTATAGGCCTTCTGGGTTaGAGGAATATAGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVIGLLG*RNIGQS
Trigger: AGACTGTCCTATATTCCTCAAACCCAGAAGGCCTAT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACCTAAAGAAGCACCACTaGTTACATAGGCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNLKKHH*LHRLLW
Trigger: CCACAGAAGCCTATGTAACAAGTGGTGCTTCTTTAG...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTGAGCCCTAATAGGTaGGCCCTTTCCAATGTGTAT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVLSPNR*ALSNVY
Trigger: ATACACATTGGAAAGGGCCAACCTATTAGGGCTCAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTGAAATTAAGTAAGTaGAGGACTTTGCTAGGCATT +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLKLSK*RTLLGI
Trigger: AATGCCTAGCAAAGTCCTCAACTTACTTAATTTCAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACACTAACAACAATGAAATaGTTGTGGGAGCCATATAGA +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTLTTMK*LWEPYR
Trigger: TCTATATGGCTCCCACAACAATTTCATTGTTGTTAG...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCTCCAGGTGAAACAATAGCCATGTACACCTTTATGTGCGTCCTGCCTTTTACATTCAACAGATTTCCTTaGCAGGGAACAAGTAATACA +
Preference number: 5 (lower is better)
Translates to: SPGETIAMYTFMCVLPFTFNRFP*QGTSNT
Trigger: TGTATTACTTGTTCCCTGCAAAGGAAATCTGTTGAA...TGTAAAAGGCAGGACGCACATAAAGGTGTACATGGCTATTGTTTCACCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTACAATGCCTGCTTCTaGAAAGAAGTCGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLYNACF*KEVGTF
Trigger: GAAAGTGCCGACTTCTTTCAAGAAGCAGGCATTGTA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTCTTGATTTTGGGTTGTaGCATGGCCTTGATTATTGC +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSLDFGL*HGLDYC
Trigger: GCAATAATCAAGGCCATGCAACAACCCAAAATCAAG...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCATCAGGGCCCAAATTTaGTGCTCAGCTAATGTTAGC +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLIRAQI*CSANVS
Trigger: GCTAACATTAGCTGAGCACAAAATTTGGGCCCTGAT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGAGACAGTAGGCTCTaGGTGAATCAGTTTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRDSRL*VNQFGK
Trigger: TTTCCCAAACTGATTCACCAAGAGCCTACTGTCTCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAAACCAGCAAAATGTaGAGCTTCCCTTCGCCATTA +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLETSKM*SFPSPL
Trigger: TAATGGCGAAGGGAAGCTCAACATTTTGCTGGTTTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCAGGTCCCAATCATGTGGTTTCTCCAGGTGAAACAATAGCCATGTACACCTTTATACTACAGCAAATTTaGCCATGTAGACCACACATT +
Preference number: 5 (lower is better)
Translates to: SGPNHVVSPGETIAMYTFILQQI*PCRPHI
Trigger: AATGTGTGGTCTACATGGCAAAATTTGCTGTAGTAT...AAAGGTGTACATGGCTATTGTTTCACCTGGAGAAACCACATGATTGGGACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACTTCACAACTTGTGTGTaGTCGTCAACGTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNFTTCV*SSTSDN
Trigger: ATTGTCTGACGTTGACGACAACACACAAGTTGTGAA...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTCACAACTTGTGTGTaGTCGTCAACGTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLFTTCV*SSTSDN
Trigger: ATTGTCTGACGTTGACGACAACACACAAGTTGTGAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTCACAACTTGTGTGTaGTCGTCAACGTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVFTTCV*SSTSDN
Trigger: ATTGTCTGACGTTGACGACAACACACAAGTTGTGAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVIFLFF*LALRSS
Trigger: AGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATAT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAACTGAGAACTTTGGCCTaGGTGCCACAAAATAAGATG +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKLRTLA*VPQNKM
Trigger: CATCTTATTTTGTGGCACCAAGGCCAAAGTTCTCAG...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGTGACACCACTTTTCTaGGCTGAGAACTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVVTPLF*AENFGL
Trigger: AAGGCCAAAGTTCTCAGCCAAGAAAAGTGGTGTCAC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307142.9
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTTTTGCATATACATACTaGAGCCCTAATAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVFAYTY*SPNRLA
Trigger: GGCCAACCTATTAGGGCTCAAGTATGTATATGCAAA...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGTGAGAGAATAGAATaGCAAGGAACGTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGERIE*QGTWEK
Trigger: CTTCTCCCACGTTCCTTGCAATTCTATTCTCTCACC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAAGTTTACAAGGTAACCTaGCCTGAATTATCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKVYKVT*PELSWS
Trigger: GGACCAGGATAATTCAGGCAAGGTTACCTTGTAAAC...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGGTCCTTATGATATCTaGACTATGGATCCCAGATTT +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSGPYDI*TMDPRF
Trigger: AAATCTGGGATCCATAGTCAAGATATCATAAGGACC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTTACGAAGGGAATAGTTaGCTCATACTAAAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSYEGNS*LILKCC
Trigger: ACAGCACTTTAGTATGAGCAAACTATTCCCTTCGTA...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATCTGATTTCGAATCTTaGCAACTTGTAAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKSDFES*QLVRAA
Trigger: AGCAGCCCTTACAAGTTGCAAAGATTCGAAATCAGA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429713.7
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGAGAAGGGCAATGCTTTaGCATTTAGATTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVRRAML*HLDFAS
Trigger: GGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCT...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGTCAAAGTTCACAACTaGTGTGTTGTCGTCAACGTC +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVVKVHN*CVVVNV
Trigger: GACGTTGACGACAACACACAAGTTGTGAACTTTGAC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLFLLS*VRSRGS
Trigger: AGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTACAAGAGTTCAGGATTaGGGCTTACTTTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSTRVQD*GLLWAL
Trigger: AAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AACAATGCATCAGCGGGCATTCTACAAATGAGAGAATCTCAGAATATCAGAGTTATGACATCTAATGCATaGAGGGGTTTCTTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: NNASAGILQMRESQNIRVMTSNA*RGFFPF
Trigger: AAAGGGAAAGAAACCCCTCAATGCATTAGATGTCAT...AACTCTGATATTCTGAGATTCTCTCATTTGTAGAATGCCCGCTGATGCATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp TCCATCAATCGTTTTAAATCTTCACATCTACCCTCACTCCATGTAACACGTAACATGACATCTAATGCATaGAGGGGTTTCTTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SINRFKSSHLPSLHVTRNMTSNA*RGFFPF
Trigger: AAAGGGAAAGAAACCCCTCAATGCATTAGATGTCAT...GTTACGTGTTACATGGAGTGAGGGTAGATGTGAAGATTTAAAACGATTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCTTTGCATCTGGAGGTaGGAAAGTAAACAAGGATGC +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVLCIWR*ESKQGC
Trigger: GCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCATAGGCCTTCTGGGTTaGAGGAATATAGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVIGLLG*RNIGQS
Trigger: AGACTGTCCTATATTCCTCAAACCCAGAAGGCCTAT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTGAATATTTTCCATGGTaGGTCAGACTCAGACTTAAA +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSEYFPW*VRLRLK
Trigger: TTTAAGTCTGAGTCTGACCAACCATGGAAAATATTC...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCACTTTGTTGTGGATATaGTTTTGGAGAACTTCCACC +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLTLLWI*FWRTST
Trigger: GGTGGAAGTTCTCCAAAACAATATCCACAACAAAGT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGACTTTGTTGTGGATATaGTTTTGGAGAACTTCCACC +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLTLLWI*FWRTST
Trigger: GGTGGAAGTTCTCCAAAACAATATCCACAACAAAGT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTACAATGCCTGCTTCTaGAAAGAAGTCGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSYNACF*KEVGTF
Trigger: GAAAGTGCCGACTTCTTTCAAGAAGCAGGCATTGTA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCTTTCTCTTTATTCAATaGCCTCTGAGTAGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLFLFIQ*PLSSAV
Trigger: CACAGCACTACTCAGAGGCAATTGAATAAAGAGAAA...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGATTAAAATGGTACTGTGTACCCTCAAACCAGGCAAGTTTTTCTGAGAGGTCTAAAAATGTCTATTGCTaGGAGCTACCAAACTCTAAG +
Preference number: 5 (lower is better)
Translates to: RLKWYCVPSNQASFSERSKNVYC*ELPNSK
Trigger: CTTAGAGTTTGGTAGCTCCAAGCAATAGACATTTTT...AGACCTCTCAGAAAAACTTGCCTGGTTTGAGGGTACACAGTACCATTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGCTCAGCTTCTTAGAATaGTTTTTCATCACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLSFLE*FFITCP
Trigger: AGGGCAAGTGATGAAAAACAATTCTAAGAAGCTGAG...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGTTGAAAACAATGTGCTaGTTAGGATCAAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLLKTMC*LGSKPS
Trigger: TGACGGCTTTGATCCTAACAAGCACATTGTTTTCAA...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVIFLFF*LALRSS
Trigger: AGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATAT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGGAATATTTTCCATGGTaGGTCAGACTCAGACTTAAA +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLEYFPW*VRLRLK
Trigger: TTTAAGTCTGAGTCTGACCAACCATGGAAAATATTC...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTGTTGCTGTTTATTTCAGTAATACCACCCACAATGAGTTGTGACATTTCAGTGCTAACAACAATGAAATaGTTGTGGGAGCCATATAGA +
Preference number: 5 (lower is better)
Translates to: VLLFISVIPPTMSCDISVLTTMK*LWEPYR
Trigger: TCTATATGGCTCCCACAACAATTTCATTGTTGTTAG...CACTGAAATGTCACAACTCATTGTGGGTGGTATTACTGAAATAAACAGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGTTGTGGATATTGTTTaGGAGAACTTCCACCCTCTT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSVVDIV*ENFHPL
Trigger: AAGAGGGTGGAAGTTCTCCAAAACAATATCCACAAC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp CTAACAAGGTATGCTTTACACTACCAATGCAGAAACTGTGTTTGTTTTCCTCTCAGGTTTAGTGTAACTTaGGAGTTATCTCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: LTRYALHYQCRNCVCFPLRFSVT*ELSLRH
Trigger: ATGTCTCAGAGATAACTCCAAAGTTACACTAAACCT...GAGAGGAAAACAAACACAGTTTCTGCATTGGTAGTGTAAAGCATACCTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GAAGTAGGTCCTTATGATATCTTGACTATGGATCCCAGATTTACATTTCACCTGAAAAATGTCTATTGCTaGGAGCTACCAAACTCTAAG +
Preference number: 5 (lower is better)
Translates to: EVGPYDILTMDPRFTFHLKNVYC*ELPNSK
Trigger: CTTAGAGTTTGGTAGCTCCAAGCAATAGACATTTTT...CAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATACGAAGGGAATAGTTaGCTCATACTAAAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKYEGNS*LILKCC
Trigger: ACAGCACTTTAGTATGAGCAAACTATTCCCTTCGTA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCCCTTTTGATGAGCATTaGGAGAGAGTCTGTTATGCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVPFDEH*ERVCYA
Trigger: AGCATAACAGACTCTCTCCAAATGCTCATCAAAAGG...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448416.6
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCTCTTTTGATGAGCATTaGGAGAGAGTCTGTTATGCT +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVSFDEH*ERVCYA
Trigger: AGCATAACAGACTCTCTCCAAATGCTCATCAAAAGA...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCAGAAGGGCAATGCTTTaGCATTTAGATTTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVRRAML*HLDFAS
Trigger: GGAAGCAAAATCTAAATGCAAAAGCATTGCCCTTCT...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp AGTGCATGCAATGAGAGAGAAGTCTGTTTTATGCTAACATGTAAGTTTAAAGTCGGATTTGGGCTTACTTaGGGCTCTTTAAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: SACNEREVCFMLTCKFKVGFGLT*GSLKVN
Trigger: GTTTACTTTTAAAGAGCCCAAAGTAAGCCCAAATCC...GACTTTAAACTTACATGTTAGCATAAAACAGACTTCTCTCTCATTGCATGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307142.9
ENST00000504178.1
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTGGATTTGGGCTTACTTaGGGCTCTTTAAAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSGFGLT*GSLKVN
Trigger: GTTTACTTTTAAAGAGCCCAAAGTAAGCCCAAATCC...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp TCCAAACCCATGTTTAGAATCTATCACACTAGTTCCTCAGGAGATGTTTTCAAATTCAACAGATTTCCTTaGCAGGGAACAAGTAATACA +
Preference number: 5 (lower is better)
Translates to: SKPMFRIYHTSSSGDVFKFNRFP*QGTSNT
Trigger: TGTATTACTTGTTCCCTGCAAAGGAAATCTGTTGAA...TTTGAAAACATCTCCTGAGGAACTAGTGTGATAGATTCTAAACATGGGTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTCTCAGCTTCTTAGAATaGTTTTTCATCACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLSFLE*FFITCP
Trigger: AGGGCAAGTGATGAAAAACAATTCTAAGAAGCTGAG...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAAAAATTCCCTGGGTTaGAAAGGCAGCTGGAATATT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSKNSLG*KGSWNI
Trigger: AATATTCCAGCTGCCTTTCAAACCCAGGGAATTTTT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTTTGAAAACAATGTGCTaGTTAGGATCAAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSLKTMC*LGSKPS
Trigger: TGACGGCTTTGATCCTAACAAGCACATTGTTTTCAA...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS-3UTR CAA 90 bp GTAAATGTACAAACATATATTTCACATCACAGAACTTCCAACACGTCACCATCTAGGTTTAGTGTAACTTaGGAGTTATCTCTGAGACAT +
Preference number: 5 (lower is better)
Translates to: VNVQTYISHHRTSNTSPSRFSVT*ELSLRH
Trigger: ATGTCTCAGAGATAACTCCAAAGTTACACTAAACCT...AGATGGTGACGTGTTGGAAGTTCTGTGATGTGAAATATATGTTTGTACATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429713.7
ENST00000627783.2
CDS CCA 72 bp GCACTCAGCTTCGGGCGCCTGCCGAGGACGCAAGACTaGGTAATGCAGAGCGTCCGCCGCTGCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ALSFGRLPRTQD*VMQSVRRCCSR
Trigger: GCGGCTGCAGCAGCGGCGGACGCTCTGCATTACCCAGTCTTGCGTCCTCGGCAGGCGCCCGAAGCTGAGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000448416.6
CDS GCA 72 bp TTGACGAGACAGACGAAGCTTGGGTGCGGTAGAGGATaGGCACTCAGCTTCGGGCGCCTGCCGAGGACGCAA +
Preference number: 6 (lower is better)
Translates to: LTRQTKLGCGRG*ALSFGRLPRTQ
Trigger: TTGCGTCCTCGGCAGGCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000448416.6
CDS TCA 72 bp TACTTCCAACTGGCCGGGAGAGATGGAGTGGGAGACTaGGCTCGAGCAGCGTGGGCCTGCACCGTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: YFQLAGRDGVGD*ARAAWACTVSE
Trigger: TTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp AGGGAGCGCCCACTCTCCGAGTACACTGACGAAGCCTaGACATTCGTAGGTGAGGCAGCATTCACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: RERPLSEYTDEA*TFVGEAAFTGR
Trigger: CCGGCCAGTGAATGCTGCCTCACCTACGAATGTGCAGGCTTCGTCAGTGTACTCGGAGAGTGGGCGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504178.1
CDS CCA 72 bp GACATTGGAGGAGTACTTCCAACTGGCCGGGAGAGATaGAGTGGGAGACTGAGCTCGAGCAGCGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: DIGGVLPTGRER*SGRLSSSSVGL
Trigger: CAGGCCCACGCTGCTCGAGCTCAGTCTCCCACTCCATCTCTCCCGGCCAGTTGGAAGTACTCCTCCAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp AGCATGAAGAGCTTGACGAGACAGACGAAGCTTGGGTaGGGTAGAGGATGCGCACTCAGCTTCGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: SMKSLTRQTKLG*GRGCALSFGRL
Trigger: CAGGCGCCCGAAGCTGAGTGCGCATCCTCTACCGCACCCAAGCTTCGTCTGTCTCGTCAAGCTCTTCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000448416.6
CDS CAA 90 bp GGCCGGGGAGGAAGAGCTTGCTTCATGGCCAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGGAGGCCATCCTTTGCATCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: GRGGRACFMARAELT*TDDFWGRPSFASGG
Trigger: ACCTCCAGATGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp GAGGATCACTTCCACCCGGGGCAGTCCCGCATCTCCTaGTTCACTTTCCTGGATCACTCTCAACTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: EDHFHPGQSRIS*FTFLDHSQLSA
Trigger: GGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAGATGCGGGACTGCCCCGGGTGGAAGTGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 72 bp CGGCGAGTGGATAGGATTATAGGCCACAGGAGGAGGTaGTCGGACATTGGAGGAGTACTTCCAACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: RRVDRIIGHRRR*SDIGGVLPTGR
Trigger: CCGGCCAGTTGGAAGTACTCCTCCAATGTCCGAGCACCTCCTCCTGTGGCCTATAATCCTATCCACTCGCCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp ACTCGTCATGTTTCGGGTTGGCGAGAAGGGGGTAGCTaGCTGATTCACAGACCCTGGGAAGGGTTTGGCCGT +
Preference number: 6 (lower is better)
Translates to: TRHVSGWREGGS*LIHRPWEGFGR
Trigger: ACGGCCAAACCCTTCCCAGGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp CTCTTCTGCCACGCGTCCTCTTTGGGAGTCAGGCATTaGGGGAGCCCTTTGGTAGCTCGGGCCTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LFCHASSLGVRH*GSPLVARACFF
Trigger: GAAGAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CAA 72 bp CGGGGAGGAAGAGCTTGCTTCATGGCCAGGGCTGAATaGACCTTGACTGATGACTTCTGGGGGAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: RGGRACFMARAE*TLTDDFWGRPS
Trigger: GGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp TTCTGCCACGCGTCCTCTTTGGGAGTCAGGCATTTGGGGAGCCCTTaGGTAGCTCGGGCCTGTTTCTTCTTTCAAGCTGCCTGCACAGTC +
Preference number: 6 (lower is better)
Translates to: FCHASSLGVRHLGSP*VARACFFFQAACTV
Trigger: GACTGTGCAGGCAGCTTGAAAGAAGAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAAAGAGGACGCGTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS TCA 72 bp AGACTGAGCTCGAGCAGCGTGGGCCTGCACCGTGTCTaGATCGACCACATACTTCTCCATTCTCGACTGCCT +
Preference number: 6 (lower is better)
Translates to: RLSSSSVGLHRV*IDHILLHSRLP
Trigger: AGGCAGTCGAGAATGGAGAAGTATGTGGTCGATTCAGACACGGTGCAGGCCCACGCTGCTCGAGCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp TGGTCCTTTGAAGGGACCAGCCACGTTCAAAGTACTTaGAGGCCGGGCAGGAGGGTAAGAAGGCTGGGCTAT +
Preference number: 6 (lower is better)
Translates to: WSFEGTSHVQST*RPGRRVRRLGY
Trigger: ATAGCCCAGCCTTCTTACCCTCCTGCCCGGCCTGCAAGTACTTTGAACGTGGCTGGTCCCTTCAAAGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp GGTGAGGCAGCATTCACTGGCCGGGGAGGAAGAGCTTaGTTCATGGCCAGGGCTGAATTGACCTTGACTGAT +
Preference number: 6 (lower is better)
Translates to: GEAAFTGRGGRA*FMARAELTLTD
Trigger: ATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCGGCCAGTGAATGCTGCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp GCGTCCTCTTTGGGAGTCAGGCATTTGGGGAGCCCTTaGGTAGCTCGGGCCTGTTTCTTCTTTCAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: ASSLGVRHLGSP*VARACFFFQAA
Trigger: GGCAGCTTGAAAGAAGAAACAGGCCCGAGCTACCAAAGGGCTCCCCAAATGCCTGACTCCCAAAGAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CAA 90 bp TTCACTGGCCGGGGAGGAAGAGCTTGCTTCATGGCCAGGGCTGAATaGACCTTGACTGATGACTTCTGGGGGAGGCCATCCTTTGCATCT +
Preference number: 6 (lower is better)
Translates to: FTGRGGRACFMARAE*TLTDDFWGRPSFAS
Trigger: AGATGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCCTCCCCGGCCAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp CAGGGGCGAGGAAGAATTCTGTGCACTGGGTCTTTGTaGCCGGTCGAATCTGCAGGGTGGTACTTTCCACAT +
Preference number: 6 (lower is better)
Translates to: QGRGRILCTGSL*PVESAGWYFPH
Trigger: ATGTGGAAAGTACCACCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 72 bp TCAGTCTTGACAGGGGCGAGGAAGAATTCTGTGCACTaGGTCTTTGTGGCCGGTCGAATCTGCAGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: SVLTGARKNSVH*VFVAGRICRVV
Trigger: TACCACCCTGCAGATTCGACCGGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 72 bp AGGAAAGTCAGCAATGGGACTCGTCATGTTTCGGGTTaGCGAGAAGGGGGTAGCTGGCTGATTCACAGACCC +
Preference number: 6 (lower is better)
Translates to: RKVSNGTRHVSG*REGGSWLIHRP
Trigger: GGGTCTGTGAATCAGCCAGCTACCCCCTTCTCGCCAACCCGAAACATGACGAGTCCCATTGCTGACTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp CAGTCGGGACCACTTCTTTGGTTCTCAGCTAGGGGAACTTCAGTCTaGACAGGGGCGAGGAAGAATTCTGTGCACTGGGTCTTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: QSGPLLWFSARGTSV*TGARKNSVHWVFVA
Trigger: GGCCACAAAGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS TCA 72 bp CCAGACTGGGGAAACTGGAGTTACTGGTTGGGAGGATaGGGACTTGACTGCAGGTTTTGGAGCAACAGGAGG +
Preference number: 6 (lower is better)
Translates to: PDWGNWSYWLGG*GLDCRFWSNRR
Trigger: CCTCCTGTTGCTCCAAAACCTGCAGTCAAGTCCTCATCCTCCCAACCAGTAACTCCAGTTTCCCCAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp CCCACTCATTCCTGGAAGCTCATTGGATGGTCCCACTaGACCAGGCTGAACAGCATTGACTGTTGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: PTHSWKLIGWSH*TRLNSIDCWCG
Trigger: TCCACACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGGACCATCCAATGAGCTTCCAGGAATGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp TCAGGCCATCGGTCTGGGCAGCATCTTGTTCTCTGCTaGGCGTTCCACCTACCTTGTCCTCTTCTTTTTGGG +
Preference number: 6 (lower is better)
Translates to: SGHRSGQHLVLC*AFHLPCPLLFG
Trigger: CCCAAAAAGAAGAGGACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTGCCCAGACCGATGGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp GGAAGAGCTTGCTTCATGGCCAGGGCTGAATTGACCTaGACTGATGACTTCTGGGGGAGGCCATCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: GRACFMARAELT*TDDFWGRPSFA
Trigger: TGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCATGAAGCAAGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS TCA 72 bp TCCCTTTTTCTTGCCCATTTTGGAGGGCTGTGCAGCTaGTGGCTGAGACTTGAGAGCAGCCAGTGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: SLFLAHFGGLCS*WLRLESSQWVR
Trigger: TCTTACCCACTGGCTGCTCTCAAGTCTCAGCCATCAGCTGCACAGCCCTCCAAAATGGGCAAGAAAAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp ACGGCAAAGGATACCAGAGAAGGAGGTGCTTCTGACTaGCCTCCTTCCACTGGAGAATCCACACACTCCTTT +
Preference number: 6 (lower is better)
Translates to: TAKDTREGGASD*PPSTGESTHSF
Trigger: AAAGGAGTGTGTGGATTCTCCAGTGGAAGGAGGGCAGTCAGAAGCACCTCCTTCTCTGGTATCCTTTGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 72 bp AGTCTTCTTCCGGTCCGGAATCACCTCCAGCTCCAGTaGCCCGTTTGCCTTCTGAATTTTGAAGGAGTGACA +
Preference number: 6 (lower is better)
Translates to: SLLPVRNHLQLQ*PVCLLNFEGVT
Trigger: TGTCACTCCTTCAAAATTCAGAAGGCAAACGGGGCACTGGAGCTGGAGGTGATTCCGGACCGGAAGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp TCTTTCAAGCTGCCTGCACAGTCGGGACCACTTCTTTaGTTCTCAGCTAGGGGAACTTCAGTCTTGACAGGG +
Preference number: 6 (lower is better)
Translates to: SFKLPAQSGPLL*FSARGTSVLTG
Trigger: CCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAAGTGGTCCCGACTGTGCAGGCAGCTTGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CCA 72 bp TCACAGACCCTGGGAAGGGTTTGGCCGTTCTATTCATaGGGACCATCCTCTGGATGTTTGCTGTCTCAGATG +
Preference number: 6 (lower is better)
Translates to: SQTLGRVWPFYS*GPSSGCLLSQM
Trigger: CATCTGAGACAGCAAACATCCAGAGGATGGTCCCCATGAATAGAACGGCCAAACCCTTCCCAGGGTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp ATGGCCAGGGCTGAATTGACCTTGACTGATGACTTCTaGGGGAGGCCATCCTTTGCATCTGGAGGTTGGAAA +
Preference number: 6 (lower is better)
Translates to: MARAELTLTDDF*GRPSFASGGWK
Trigger: TTTCCAACCTCCAGATGCAAAGGATGGCCTCCCCCAGAAGTCATCAGTCAAGGTCAATTCAGCCCTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp TTTGCTCACAGAGCTCTGCGTTCTTACCGACTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCTCAGGCCATCGGTCTGGGCAGCATC +
Preference number: 6 (lower is better)
Translates to: FAHRALRSYRLFLLS*VRSRGSQAIGLGSI
Trigger: GATGCTGCCCAGACCGATGGCCTGAGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS TCA 72 bp CACTTCTTTGGTTCTCAGCTAGGGGAACTTCAGTCTTaGCAGGGGCGAGGAAGAATTCTGTGCACTGGGTCT +
Preference number: 6 (lower is better)
Translates to: HFFGSQLGELQS*QGRGRILCTGS
Trigger: AGACCCAGTGCACAGAATTCTTCCTCGCCCCTGTCAAGACTGAAGTTCCCCTAGCTGAGAACCAAAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS TCA 72 bp CCATCCTCTGGATGTTTGCTGTCTCAGATGTCCCACTaGAGCCATTCTGTTGGGGAACATGGCCAAGACCAT +
Preference number: 6 (lower is better)
Translates to: PSSGCLLSQMSH*SHSVGEHGQDH
Trigger: ATGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp GATCTTTTTCCGAGCGTGGATCTTCTCCCTGCTCTGTaGCTTCTGATGAGACGGCAAAGGATACCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: DLFPSVDLLPAL*LLMRRQRIPEK
Trigger: CTTCTCTGGTATCCTTTGCCGTCTCATCAGAAGGCACAGAGCAGGGAGAAGATCCACGCTCGGAAAAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 72 bp TTCTCAGGCCATCGGTCTGGGCAGCATCTTGTTCTCTaGTTGGCGTTCCACCTACCTTGTCCTCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: FSGHRSGQHLVL*LAFHLPCPLLF
Trigger: AAAAAGAAGAGGACAAGGTAGGTGGAACGCCAAGCAGAGAACAAGATGCTGCCCAGACCGATGGCCTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp CATGGCCAAGACCATGACTCACCTCGATGTAGCTTTTaGTCACAGAGCTCTGCGTTCTTACCGACTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HGQDHDSPRCSF*SQSSAFLPTLP
Trigger: AGGAAGAGTCGGTAAGAACGCAGAGCTCTGTGAGCAAAAGCTACATCGAGGTGAGTCATGGTCTTGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS GCA 72 bp GGCCGTTCTATTCATGGGGACCATCCTCTGGATGTTTaGTGTCTCAGATGTCCCACTGAAGCCATTCTGTTG +
Preference number: 6 (lower is better)
Translates to: GRSIHGDHPLDV*CLRCPTEAILL
Trigger: CAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGGATGGTCCCCATGAATAGAACGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp AGAGCTCTGCGTTCTTACCGACTCTTCCTCCTTTCTTaGGTAAGAAGTCGTGGTTCTCAGGCCATCGGTCTG +
Preference number: 6 (lower is better)
Translates to: RALRSYRLFLLS*VRSRGSQAIGL
Trigger: CAGACCGATGGCCTGAGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAGTCGGTAAGAACGCAGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp GTTTGCTGTCTCAGATGTCCCACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACCATGACTCACCTCGAT +
Preference number: 6 (lower is better)
Translates to: VCCLRCPTEAIL*GNMAKTMTHLD
Trigger: ATCGAGGTGAGTCATGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp CCTCTGGATGTTTGCTGTCTCAGATGTCCCACTGAAGCCATTCTGTaGGGGAACATGGCCAAGACCATGACTCACCTCGATGTAGCTTTT +
Preference number: 6 (lower is better)
Translates to: PLDVCCLRCPTEAIL*GNMAKTMTHLDVAF
Trigger: AAAAGCTACATCGAGGTGAGTCATGGTCTTGGCCATGTTCCCCAACAGAATGGCTTCAGTGGGACATCTGAGACAGCAAACATCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS TCA 72 bp TCTCCCTCACAGAGCCCAGACCCAGAGGCTTTGCTCTaGTTTCGAATCTGTGTAACCATTCCTCTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: SPSQSPDPEALL*FRICVTIPLVS
Trigger: TGAGACAAGAGGAATGGTTACACAGATTCGAAATCAGAGCAAAGCCTCTGGGTCTGGGCTCTGTGAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610556.4
CDS GCA 72 bp CTCCTGCTTCACTTTCCTGGATCACTCTCAACTCTCTaGCACTGGAGATCTGGATTATCTTGCTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: LLLHFPGSLSTL*HWRSGLSCWTS
Trigger: TGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 72 bp AACTGTTGGTTTGGGTGTGTAATTCTGACTGGCTACTaGTGCTTGTGGTCCTTTGAAGGGACCAGCCACGTT +
Preference number: 6 (lower is better)
Translates to: NCWFGCVILTGY*CLWSFEGTSHV
Trigger: AACGTGGCTGGTCCCTTCAAAGGACCACAAGCAGCAGTAGCCAGTCAGAATTACACACCCAAACCAACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp TTACCGACTCTTCCTCCTTTCTTTGGTAAGAAGTCGTaGTTCTCAGGCCATCGGTCTGGGCAGCATCTTGTT +
Preference number: 6 (lower is better)
Translates to: LPTLPPFFGKKS*FSGHRSGQHLV
Trigger: AACAAGATGCTGCCCAGACCGATGGCCTGAGAACCACGACTTCTTACCAAAGAAAGGAGGAAGAGTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp TGGTCCCACTGCACCAGGCTGAACAGCATTGACTGTTaGTGTGGAAACTGTTGGTTTGGGTGTGTAATTCTG +
Preference number: 6 (lower is better)
Translates to: WSHCTRLNSIDC*CGNCWFGCVIL
Trigger: CAGAATTACACACCCAAACCAACAGTTTCCACACCAACAGTCAATGCTGTTCAGCCTGGTGCAGTGGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp GACAGTCTCCCTCACCAATCTGATCCATCCTCAAGATaGGAGCTTCGCTTCCGAGTTGCCGAATTCAGATCT +
Preference number: 6 (lower is better)
Translates to: DSLPHQSDPSSR*ELRFRVAEFRS
Trigger: AGATCTGAATTCGGCAACTCGGAAGCGAAGCTCCAATCTTGAGGATGGATCAGATTGGTGAGGGAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610556.4
CDS CAA 90 bp TTGTCGTGCTTCTCCTTTTGGCCTCCTGCAATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCTCATCTCGGGAAGCTATTCGCTCAG +
Preference number: 6 (lower is better)
Translates to: LSCFSFWPPAIFLFF*LALRSSHLGKLFAQ
Trigger: CTGAGCGAATAGCTTCCCGAGATGAGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CCA 72 bp CTTCACTTTCCTGGATCACTCTCAACTCTCTGCCACTaGAGATCTGGATTATCTTGCTGGACCTCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: LHFPGSLSTLCH*RSGLSCWTSGK
Trigger: CTTTCCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCAGAGAGTTGAGAGTGATCCAGGAAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CAA 72 bp GACTGCAGGTTTTGGAGCAACAGGAGGAGGGGTCTTTaGTTTGGCAGAGGAGCTTTGCATGAAATTACAAGC +
Preference number: 6 (lower is better)
Translates to: DCRFWSNRRRGL*FGRGALHEITS
Trigger: GCTTGTAATTTCATGCAAAGCTCCTCTGCCAAACAAAAGACCCCTCCTCCTGTTGCTCCAAAACCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp TGTTTCTGGGTTGGAAAGCATCATCCACTAGACCGAGAGGAGACTTaGCTGCTGCTTCCCAAGGAGTTGGTCTCTTGTTTGCTTTCTCTA +
Preference number: 6 (lower is better)
Translates to: CFWVGKHHPLDREET*LLLPKELVSCLLSL
Trigger: TAGAGAAAGCAAACAAGAGACCAACTCCTTGGGAAGCAGCAGCAAAGTCTCCTCTCGGTCTAGTGGATGATGCTTTCCAACCCAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307142.9
ENST00000448416.6
ENST00000504178.1
ENST00000610556.4
CDS GCA 72 bp TTCCATGAGCTTGATGACTTCAGGGTAGGTGAGATCTaGACAAGGGTTGCCATTGATGGAAACCACTTCATC +
Preference number: 6 (lower is better)
Translates to: FHELDDFRVGEI*TRVAIDGNHFI
Trigger: GATGAAGTGGTTTCCATCAATGGCAACCCTTGTGCAGATCTCACCTACCCTGAAGTCATCAAGCTCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000448416.6
ENST00000504178.1
ENST00000610556.4
CDS CAA 72 bp TTCTCCTTTTGGCCTCCTGCAATATTCCTGTTCTTTTaGCTGGCACTGAGATCCTCTCATCTCGGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: FSFWPPAIFLFF*LALRSSHLGKL
Trigger: TAGCTTCCCGAGATGAGAGGATCTCAGTGCCAGCAAAAAGAACAGGAATATTGCAGGAGGCCAAAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp CTGATCCATCCTCAAGATTGGAGCTTCGCTTCCGAGTaGCCGAATTCAGATCTTTACTTCACCTTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LIHPQDWSFASE*PNSDLYFTFSP
Trigger: AGGAGAGAAGGTGAAGTAAAGATCTGAATTCGGCAACTCGGAAGCGAAGCTCCAATCTTGAGGATGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610556.4
CDS CAA 90 bp ATGTCCACCAGTCCAGAATCCCAGTCAAAGTTCACAACTTGTGTGTaGTCGTCAACGTCAGACAATAACTCTTCATCCACCTCTGATTCG +
Preference number: 6 (lower is better)
Translates to: MSTSPESQSKFTTCV*SSTSDNNSSSTSDS
Trigger: CGAATCAGAGGTGGATGAAGAGTTATTGTCTGACGTTGACGACAACACACAAGTTGTGAACTTTGACTGGGATTCTGGACTGGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp ACTCTATATGACAGTCTCCCTCACCAATCTGATCCATCCTCAAGATaGGAGCTTCGCTTCCGAGTTGCCGAATTCAGATCTTTACTTCAC +
Preference number: 6 (lower is better)
Translates to: TLYDSLPHQSDPSSR*ELRFRVAEFRSLLH
Trigger: GTGAAGTAAAGATCTGAATTCGGCAACTCGGAAGCGAAGCTCCAATCTTGAGGATGGATCAGATTGGTGAGGGAGACTGTCATATAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610556.4
CDS CCA 72 bp GGGTCTGCTTTCTCATTAGTAGGGATCGAATTTATGTaGACAATCCTGTCATGTGACAAGTTAGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GSAFSLVGIEFM*TILSCDKLGSG
Trigger: CCCAGACCCTAACTTGTCACATGACAGGATTGTCCACATAAATTCGATCCCTACTAATGAGAAAGCAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS CAA 72 bp AGTCCAGAATCCCAGTCAAAGTTCACAACTTGTGTGTaGTCGTCAACGTCAGACAATAACTCTTCATCCACC +
Preference number: 6 (lower is better)
Translates to: SPESQSKFTTCV*SSTSDNNSSST
Trigger: GGTGGATGAAGAGTTATTGTCTGACGTTGACGACAACACACAAGTTGTGAACTTTGACTGGGATTCTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 90 bp GGTAGAGGAAGAAAGGTAGGCTGGGAAGTAGGTCCTTATGATATCTaGACTATGGATCCCAGATTTACATTTCACCTGAATTGTGACACC +
Preference number: 6 (lower is better)
Translates to: GRGRKVGWEVGPYDI*TMDPRFTFHLNCDT
Trigger: GGTGTCACAATTCAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTCCCAGCCTACCTTTCTTCCTCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434046.6
CDS TCA 72 bp AGTAGGGATCGAATTTATGTGGACAATCCTGTCATGTaGCAAGTTAGGGTCTGGGTCAGGAGACTTAGATTT +
Preference number: 6 (lower is better)
Translates to: SRDRIYVDNPVM*QVRVWVRRLRF
Trigger: AAATCTAAGTCTCCTGACCCAGACCCTAACTTGTCACATGACAGGATTGTCCACATAAATTCGATCCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
CDS TCA 72 bp TCTGGAGGTTGGAAAGTAAACAAGGATGCATTGAGCTaGTACGGTTGGTGCTTCATGACATCTAATGCATTG +
Preference number: 6 (lower is better)
Translates to: SGGWKVNKDALS*YGWCFMTSNAL
Trigger: CAATGCATTAGATGTCATGAAGCACCAACCGTATCAGCTCAATGCATCCTTGTTTACTTTCCAACCTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307142.9
ENST00000429713.7
ENST00000434046.6
ENST00000504178.1
ENST00000610556.4
ENST00000627783.2
CDS CAA 72 bp AGAAAGGTAGGCTGGGAAGTAGGTCCTTATGATATCTaGACTATGGATCCCAGATTTACATTTCACCTGAAT +
Preference number: 6 (lower is better)
Translates to: RKVGWEVGPYDI*TMDPRFTFHLN
Trigger: ATTCAGGTGAAATGTAAATCTGGGATCCATAGTCAAGATATCATAAGGACCTACTTCCCAGCCTACCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434046.6