RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNPO (Homo sapiens)

Ensembl gene IDs: ENSG00000171992

Ensembl transcript IDs: ENST00000307662.5, ENST00000394243.5, ENST00000518872.1, ENST00000519664.1, ENST00000522122.1

Found 1262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGACCCTGGAGGGGAGCGCAGGCGGAGGCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACGGTGTCCAGAAGGCAGAGGCAGAAG +
Preference number: 1 (lower is better)
Translates to: KDPGGERRRRRGKAL*SSGEETVSRRQRQK
Trigger: CTTCTGCCTCTGCCTTCTGGACACCGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCGCCTCCGCCTGCGCTCCCCTCCAGGGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 90 bp GGACTTGGTGCCAGGGAGCCGGATGGTCAGGCCAGTGCCTGGACATaGGACACAGGCCTAGGACCTTCTGAACACACCCCGCTTGCCAGA +
Preference number: 1 (lower is better)
Translates to: GLGAREPDGQASAWT*DTGLGPSEHTPLAR
Trigger: TCTGGCAAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGCACCAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 90 bp TGCCTGGGACTTGGTGCCAGGGAGCCGGATGGTCAGGCCAGTGCCTaGACATGCGACACAGGCCTAGGACCTTCTGAACACACCCCGCTT +
Preference number: 1 (lower is better)
Translates to: CLGLGAREPDGQASA*TCDTGLGPSEHTPL
Trigger: AAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGCACCAAGTCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 90 bp TGGTCAGGCCAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTaGACACACCCCGCTTGCCAGACTCCAGACAGCAGAGCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: WSGQCLDMRHRPRTF*THPACQTPDSRARR
Trigger: CCTCCTGGCTCTGCTGTCTGGAGTCTGGCAAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 90 bp CTCTATGCTACTGCCTCAGCCAGAGGCCTGATGGTGTCCCTTCCCTaGGAGGGGCCCTTAGCCCCAGTCTCCTGTGCTACAAGGGACCCA +
Preference number: 1 (lower is better)
Translates to: LYATASARGLMVSLP*EGPLAPVSCATRDP
Trigger: TGGGTCCCTTGTAGCACAGGAGACTGGGGCTAAGGGCCCCTCCCAGGGAAGGGACACCATCAGGCCTCTGGCTGAGGCAGTAGCATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 90 bp CAAAGAGAATGTGAGTGGGCCAAAGTCACACAGCAAATGAGAAGGTaGCATGGGACCGGAACCCTCCTCTCCTGCCTCCCCCTGGGCCCC +
Preference number: 1 (lower is better)
Translates to: QRECEWAKVTQQMRR*HGTGTLLSCLPLGP
Trigger: GGGGCCCAGGGGGAGGCAGGAGAGGAGGGTTCCGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 90 bp CTCCCCATTCTCCTCACTCAGCTCTGTGCCATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAAGGAGGGGAACTTGACCGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: LPILLTQLCAISCHI*SPSGPQGGELDRQW
Trigger: CCACTGCCGGTCAAGTTCCCCTCCTTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGGAGAATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 90 bp CTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATaGGCCCAGAAGGAACAGATGAGCTGGAGGCCCAAGTCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: LFSPQFSFEPRTCHE*AQKEQMSWRPKSWA
Trigger: GGCCCAGGACTTGGGCCTCCAGCTCATCTGTTCCTTCTGGGCCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 90 bp CTGAGGCCCAAAGAGAATGTGAGTGGGCCAAAGTCACACAGCAAATaGGAAGGTGACATGGGACCGGAACCCTCCTCTCCTGCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: LRPKENVSGPKSHSK*EGDMGPEPSSPASP
Trigger: GGGGGAGGCAGGAGAGGAGGGTTCCGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTGGGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 90 bp CTAGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTaGCTCAGCCAGAGGCCTGATGGTGTCCCTTCCCTGGGAGGGGCC +
Preference number: 1 (lower is better)
Translates to: LVLWEMQVEMDPLCY*LSQRPDGVPSLGGA
Trigger: GGCCCCTCCCAGGGAAGGGACACCATCAGGCCTCTGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp CTGGCATCAGACTCTGCATCCCTACAGCTCACAAAGGCCAGAGGATaGCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTCTCTCCATG +
Preference number: 1 (lower is better)
Translates to: LASDSASLQLTKARG*PSTASGLPDSSLSM
Trigger: CATGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGCTGTAGGGATGCAGAGTCTGATGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 90 bp GATGGGCCAGAGCCTGACCTCACCCTAACAGCCATGCCTGGGCACTaGCTCTGTGTGTATGTTTTTGAGTCGGGGGTGTGCACAGTACGA +
Preference number: 1 (lower is better)
Translates to: DGPEPDLTLTAMPGH*LCVYVFESGVCTVR
Trigger: TCGTACTGTGCACACCCCCGACTCAAAAACATACACACAGAGTCAGTGCCCAGGCATGGCTGTTAGGGTGAGGTCAGGCTCTGGCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 90 bp GAGAACAGCCAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTaGCTCCTGCTAGTCCTCTGGGAAATGCAGGTAGAAATGGATCCT +
Preference number: 1 (lower is better)
Translates to: ENSQALAWELPVSQG*LLLVLWEMQVEMDP
Trigger: AGGATCCATTTCTACCTGCATTTCCCAGAGGACTAGCAGGAGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp ACCCAGCACACGTCTGTACCAGTGCAGAACCAGACACACGGCAGGTaGAGGCAGCACGCAGGACACAGCCACACTTTCACACACAGTAAT +
Preference number: 1 (lower is better)
Translates to: TQHTSVPVQNQTHGR*RQHAGHSHTFTHSN
Trigger: ATTACTGTGTGTGAAAGTGTGGCTGTGTCCTGCGTGCTGCCTGCACCTGCCGTGTGTCTGGTTCTGCACTGGTACAGACGTGTGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 90 bp TTGTGTATACATGAGCCAGAGACACTGGGAGCTTCTCTGTGCCAGTaGAACATCCCAGTCAGGCTGGCCGCAGAAGGCAGACCCCACAGT +
Preference number: 1 (lower is better)
Translates to: LCIHEPETLGASLCQ*NIPVRLAAEGRPHS
Trigger: ACTGTGGGGTCTGCCTTCTGCGGCCAGCCTGACTGGGATGTTCCACTGGCACAGAGAAGCTCCCAGTGTCTCTGGCTCATGTATACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 90 bp GCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTaGCATGAATGGGCCCAGAAGGAACAGATGAGCTGGAGGCCCAAG +
Preference number: 1 (lower is better)
Translates to: ALYLFSPQFSFEPRT*HEWAQKEQMSWRPK
Trigger: CTTGGGCCTCCAGCTCATCTGTTCCTTCTGGGCCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp CTCCTGCTAGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATaGTACTGCCTCAGCCAGAGGCCTGATGGTGTCCCTTCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: LLLVLWEMQVEMDPL*YCLSQRPDGVPSLG
Trigger: TCCCAGGGAAGGGACACCATCAGGCCTCTGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACTAGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp TCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTGCTCTCCATCTGGCCCTCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: SDLEPWTPHSPHSAL*HFLPHLLSIWPSRR
Trigger: CCTCCTTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 90 bp GGCAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATaGCTAGGGGCCACCCTCCCTGTGGCACACCCACATCTGCACAGC +
Preference number: 1 (lower is better)
Translates to: GRSWLNLKPKQPMDT*LGATLPVAHPHLHS
Trigger: GCTGTGCAGATGTGGGTGTGCCACAGGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 90 bp ATTGTGATAAAAATAGAGCTTGTCTGGGAAGGGATGGAAAACAGCTaGTCCTGCCTGGGACTTGGTGCCAGGGAGCCGGATGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: IVIKIELVWEGMENS*SCLGLGAREPDGQA
Trigger: GGCCTGACCATCCGGCTCCCTGGCACCAAGTCCCAGGCAGGAGCAGCTGTTTTCCATCCCTTCCCAGACAAGCTCTATTTTTATCACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp GTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACTaGCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: VWNPEGSKSRGPYTH*PASSKALTSVCVCV
Trigger: CACACACACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 90 bp TTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGACACTaGGAGCTTCTCTGTGCCAGTGGAACATCCCAGTCAGGCTGGCCG +
Preference number: 1 (lower is better)
Translates to: FSSQGQNCVYMSQRH*ELLCASGTSQSGWP
Trigger: CGGCCAGCCTGACTGGGATGTTCCACTGGCACAGAGAAGCTCCCAGTGTCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 90 bp AGCATCCACTCAACCCAACCCCAGACCCAAAGCAGGGCACATGTGTaGGGTGAATACATAAGTAGAACACAGTCAAACCTGGACTGTCGG +
Preference number: 1 (lower is better)
Translates to: SIHSTQPQTQSRAHV*GEYISRTQSNLDCR
Trigger: CCGACAGTCCAGGTTTGACTGTGTTCTACTTATGTATTCACCCCACACATGTGCCCTGCTTTGGGTCTGGGGTTGGGTTGAGTGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR TCA 90 bp CTGAGTAAGAGCACCTTCTCATCTTCACAGCAGCAGGAGCATTCCTaGGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAAGCA +
Preference number: 1 (lower is better)
Translates to: LSKSTFSSSQQQEHS*GPRSPLRSLFHSKA
Trigger: TGCTTTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGCTGCTGTGAAGATGAGAAGGTGCTCTTACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp TTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTaGTCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACT +
Preference number: 1 (lower is better)
Translates to: FPRGPEIQADPNLTP*SRTQAHRPLNSSPT
Trigger: AGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 90 bp AAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTaGTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGT +
Preference number: 1 (lower is better)
Translates to: KEQKVAICTGFWLPE*CREEALISNPAHVC
Trigger: ACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 90 bp TTTTGGCCAAACTCTGAGGGAAGGAAAGAACAAAAGGTTGCGATTTaGACAGGGTTCTGGCTCCCTGAGTGCTGTAGAGAGGAAGCCCTC +
Preference number: 1 (lower is better)
Translates to: FWPNSEGRKEQKVAI*TGFWLPECCREEAL
Trigger: GAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCCCTCAGAGTTTGGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 90 bp TGCCTCTTCCCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTaGGAGACCTCTCTAAAGGTCATTGTGATAAAAATAGAGCTTGTC +
Preference number: 1 (lower is better)
Translates to: CLFPPEGIVGHLELA*ETSLKVIVIKIELV
Trigger: GACAAGCTCTATTTTTATCACAATGACCTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGGGAAGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 90 bp TCTGAGGGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTaGCTCCCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCA +
Preference number: 1 (lower is better)
Translates to: SEGRKEQKVAICTGF*LPECCREEALISNP
Trigger: TGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 90 bp ACTAGCAGTCATCCACCAGAGTTCAGAGCTAGCCAGTCCATTCCATaGTTCCTACCCGATCAAAATCTAGAACCATCCAAAGATTTATTC +
Preference number: 1 (lower is better)
Translates to: TSSHPPEFRASQSIP*FLPDQNLEPSKDLF
Trigger: GAATAAATCTTTGGATGGTTCTAGATTTTGATCGGGTAGGAAGCATGGAATGGACTGGCTAGCTCTGAACTCTGGTGGATGACTGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGAGGCAGACCCTCGGCTaGCTGACTCCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWRQTLG*LTPQAL
Trigger: CAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCTGCCT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: WEREVGGPRPPALRSFHLPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: WEREVGGPRPPALRSFHLVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: WEREVGGPRPPALRSFHLSVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAGACCCTCGGCTGGCTaGCTCCACAGGCACTGGCAG +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESRPSAG*LHRHWQ
Trigger: CTGCCAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACG +
Preference number: 2 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWRGKAL*SSGEET
Trigger: CGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCCCACTGCACTGCTATaGACCTGCCCCAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: WEREVGGPRPPALRSFHLPTALL*TCPSSC
Trigger: GCAGGAGCTGGGGCAGGTGCATAGCAGTGCAGTGGG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWTGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGGCCACCCTCCCTGTaGCACACCCACATCTGCACA +
Preference number: 2 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGPPSL*HTHICT
Trigger: TGTGCAGATGTGGGTGTGCCACAGGGAGGGTGGCCC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSLPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTCTGACCCCTCATCTCTaGGGCTGCCCAAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: PESQPPRFREPVRACSQALTPHL*GCPKRP
Trigger: TGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAG...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: REVGGPRPPALRSFHLNPSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACG +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESRGKAL*SSGEET
Trigger: CGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTGCGAAGCTTCCATCTaGATCCTGCCACTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWCEASI*ILPLVS
Trigger: AGACACAAGTGGCAGGATTCAGATGGAAGCTTCGCA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CAA 90 bp CGACTCGCCCAAGGTCACAAAGCCAGCTGGTGGCCGCATCTGACCTaGAACCATGGACTCCCCATTCTCCTCACTCAGCTCTGTGCCATT +
Preference number: 2 (lower is better)
Translates to: RLAQGHKASWWPHLT*NHGLPILLTQLCAI
Trigger: AATGGCACAGAGCTGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTGACCTTGGGCGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGGGAGGAAGGGAACCCTaGCCCCTAGCAGCACGGAAG +
Preference number: 2 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLGGREP*PLAARK
Trigger: CTTCCGTGCTGCTAGGGGTCAGGGTTCCCTTCCTCC...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCGCACTGCTATGCACCTaGCCCAGCTCCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: PECCREEALISNPAHVCTALLCT*PSSCHA
Trigger: AGCATGGCAGGAGCTGGGGCAGGTGCATAGCAGTGC...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAAC +
Preference number: 2 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCHKASW*PHLTLN
Trigger: GTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCTGGCACACCCACATCTaGACAGCCCCCTACAGGGCT +
Preference number: 2 (lower is better)
Translates to: VESEAKTANGYMARGHPPWHTHI*TAPYRA
Trigger: AGCCCTGTAGGGGGCTGTGCAGATGTGGGTGTGCCA...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGCTCTCCTTCTCCTaGGGATCCCCTGGGACGTCC +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGLSFS*GSPGTS
Trigger: GGACGTCCCAGGGGATCCCCAGGAGAAGGAGAGCCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGCAGCAGGAGCATTCCTaGGGCCCAAGGAGCCCTCTA +
Preference number: 2 (lower is better)
Translates to: QEAFIEGQSCILQEARGRQQEHS*GPRSPL
Trigger: TAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGCTG...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAAGTCACACAGCAAATaGGAAGGTGACATGGGACCG +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESKSHSK*EGDMGP
Trigger: CGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGGCCAGTGCCTGGACATaGGACACAGGCCTAGGACCT +
Preference number: 2 (lower is better)
Translates to: QEAFIEGQSCILQEARGRASAWT*DTGLGP
Trigger: AGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGACAAAGGCCAGAGGATaGCCCTCTACCGCATCAGGG +
Preference number: 2 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQTKARG*PSTASG
Trigger: CCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGCTGGCATCAGACTCTaGATCCCTACAGCTCACAAA +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESAGIRL*IPTAHK
Trigger: TTTGTGAGCTGTAGGGATGCAGAGTCTGATGCCAGC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTGGGCCCCGTTCCACTaGGCTGAGGTGGCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQWAPFH*AEVASF
Trigger: AAAAGAAGCCACCTCAGCGCAGTGGAACGGGGCCCA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCCCACTGCACTGCTATaGACCTGCCCCAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEPTALL*TCPSSC
Trigger: GCAGGAGCTGGGGCAGGTGCATAGCAGTGCAGTGGG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGGGTCAGGCCAGTGCCTaGACATGCGACACAGGCCTA +
Preference number: 2 (lower is better)
Translates to: CISSLPSSALSPEPAMNGGQASA*TCDTGL
Trigger: TAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACC...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATGCCAGGGAGCCGGATaGTCAGGCCAGTGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSCQGAG*SGQCLD
Trigger: GTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGCA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGCTCCTGCCTGGGACTTaGTGCCAGGGAGCCGGATGG +
Preference number: 2 (lower is better)
Translates to: TTHPRLPNIMECISRLEELLPGT*CQGAGW
Trigger: CCATCCGGCTCCCTGGCACCAAGTCCCAGGCAGGAG...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAACAGCTGCTCCTGCCTaGGACTTGGTGCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPTAAPA*DLVPGS
Trigger: GCTCCCTGGCACCAAGTCCCAGGCAGGAGCAGCTGT...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCAAAGAGAATGTGAGTaGGCCAAAGTCACACAGCAA +
Preference number: 2 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSQRECE*AKVTQQ
Trigger: TTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp ATGAGAGAACAGCCAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTGCCTTGGGAAGGGGAATTTTaGCGTTTGTGGATTGCCTTG +
Preference number: 2 (lower is better)
Translates to: MREQPGAGLGTAGFSRLPWEGEF*RLWIAL
Trigger: CAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCA...AGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCAGACCCTCGGCTGGCTaGCTCCACAGGCACTGGCAG +
Preference number: 2 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFRPSAG*LHRHWQ
Trigger: CTGCCAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAAGTCTCCAGCTACCTaGCTTAACACCCTCACTGTA +
Preference number: 2 (lower is better)
Translates to: REVGGPRPPALRSFHLNPKSPAT*LNTLTV
Trigger: TACAGTGAGGGTGTTAAGTCAGGTAGCTGGAGACTT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAGGGATGGAAAACAGCTaGTCCTGCCTGGGACTTGGT +
Preference number: 2 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQGMENS*SCLGLG
Trigger: ACCAAGTCCCAGGCAGGAGCAGCTGTTTTCCATCCC...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 2 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSLCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCAGAGCTCACAAAAACTaGAGGCTCAGCCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: PECCREEALISNPAHVCTRAHKN*RLSPAW
Trigger: CCATGCTGGGCTGAGCCTGCAGTTTTTGTGAGCTCT...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp GCCAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTGAACACACCCCGCTTGTTTGTGGATTGCCTTaGCCAAAGCCACCATTAAAC +
Preference number: 2 (lower is better)
Translates to: ASAWTCDTGLGPSEHTPLVCGLP*PKPPLN
Trigger: GTTTAATGGTGGCTTTGGCCAAGGCAATCCACAAAC...AAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAAC +
Preference number: 2 (lower is better)
Translates to: VESEAKTANGYMARGHPPHKASW*PHLTLN
Trigger: GTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKASVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGGCTCTCCTTCTCCTaGGGATCCCCTGGGACGTCC +
Preference number: 2 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGLSFS*GSPGTS
Trigger: GGACGTCCCAGGGGATCCCCAGGAGAAGGAGAGCCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCACCCAGAAGGAACAGATaGGCTGGAGGCCCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPPRRNR*AGGPSP
Trigger: AGGACTTGGGCCTCCAGCTCATCTGTTCCTTCTGGG...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp CCAAGTCCTGGGCCTAAGGGAAATCACTGCCTTATAATTCTCTTATGGCTGCAGGGATGGTCAGGCCAGTaGCTGGACATGCGACACAGG +
Preference number: 2 (lower is better)
Translates to: PSPGPKGNHCLIILLWLQGWSGQ*LDMRHR
Trigger: CCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCC...CTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 2 (lower is better)
Translates to: VESEAKTANGYMARGHPPPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAACCCACTGCACTGCTATaGACCTGCCCCAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKPTALL*TCPSSC
Trigger: GCAGGAGCTGGGGCAGGTGCATAGCAGTGCAGTGGG...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAAGGCAGACCCTCGGCTaGCTGACTCCACAGGCACTG +
Preference number: 2 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKARQTLG*LTPQAL
Trigger: CAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCTGCCT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCAAAGAGAATGTGAGTaGGCCAAAGTCACACAGCAA +
Preference number: 2 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESQRECE*AKVTQQ
Trigger: TTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAGACCCTCGGCTGGCTaGCTCCACAGGCACTGGCAG +
Preference number: 2 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSRPSAG*LHRHWQ
Trigger: CTGCCAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSETGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCAAGTCTCCAGCTACCTaGCTTAACACCCTCACTGTA +
Preference number: 2 (lower is better)
Translates to: PECCREEALISNPAHVCTKSPAT*LNTLTV
Trigger: TACAGTGAGGGTGTTAAGTCAGGTAGCTGGAGACTT...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR TCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGGCCATGCCTGGGCACTaGCTCTGTGTGTATGTTTTT +
Preference number: 2 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLAMPGH*LCVYVF
Trigger: AAAAACATACACACAGAGTCAGTGCCCAGGCATGGC...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGTCCATATACACACTaGCCCGCCTCATCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LCISSLPSSALSPEPAMNGPYTH*PASSKA
Trigger: TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 2 (lower is better)
Translates to: VESEAKTANGYMARGHPPLCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYLPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCACAAAGGCCAGAGGATaGCCCTCTACCGCATCAGGG +
Preference number: 2 (lower is better)
Translates to: QILVESEAKTANGYMARGTKARG*PSTASG
Trigger: CCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGT...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGCTGGCATCAGACTCTaGATCCCTACAGCTCACAAA +
Preference number: 2 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQAGIRL*IPTAHK
Trigger: TTTGTGAGCTGTAGGGATGCAGAGTCTGATGCCAGC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: IFLKILRSPLSLPTALLCPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAAC +
Preference number: 2 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYHKASW*PHLTLN
Trigger: GTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTGGGCTCTCCTTCTCCTaGGGATCCCCTGGGACGTCC +
Preference number: 2 (lower is better)
Translates to: GQQVEEITIQPRLQNRRAGLSFS*GSPGTS
Trigger: GGACGTCCCAGGGGATCCCCAGGAGAAGGAGAGCCC...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGCCACAAAGCCTGGTTTaGTCGGGGGCTGTATCATAT +
Preference number: 2 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLPQSLV*SGAVSY
Trigger: ATATGATACAGCCCCCGACCAAACCAGGCTTTGTGG...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR TCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCACACAACAGCTGAATaGGAGCAAGGGCTAGAACTC +
Preference number: 2 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCHTTAE*EQGLEL
Trigger: GAGTTCTAGCCCTTGCTCTCATTCAGCTGTTGTGTG...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR TCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAATGTCCTGGACAGTCTaGACTGGGATGGAGAAAGTA +
Preference number: 2 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQMSWTV*TGMEKV
Trigger: TACTTTCTCCATCCCAGTTCAGACTGTCCAGGACAT...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR TCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCACCCCCTCGATCTGTGTaGAATGAGCTCACTAAGAAG +
Preference number: 2 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAPPRSV*NELTKK
Trigger: CTTCTTAGTGAGCTCATTTCACACAGATCGAGGGGG...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCATGGGCCCCGTTCCACTaGGCTGAGGTGGCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAWAPFH*AEVASF
Trigger: AAAAGAAGCCACCTCAGCGCAGTGGAACGGGGCCCA...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGCTAAAGCATTGTTTCTaGCTTTGGTGGCCACAAGGG +
Preference number: 2 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLLKHCF*LWWPQG
Trigger: CCCTTGTGGCCACCAAAGGCAGAAACAATGCTTTAG...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGTTGTCTGGGAAGGGATaGAAAACAGCTGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TTTTHPRLPNIMECISRLLSGKG*KTAAPA
Trigger: GGCAGGAGCAGCTGTTTTCCATCCCTTCCCAGACAA...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGCACCTTGAGCTGGCCTaGGAGACCTCTCTAAAGGTC +
Preference number: 2 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLHLELA*ETSLKV
Trigger: GACCTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTG...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: IFLKILRSPLSLPTALLCPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKSVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCAGCCAATGGATACATaGCTAGGGGCCACCCTCCCT +
Preference number: 2 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSQPMDT*LGATLP
Trigger: AGGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGTCCACTGCGCTGAGGTaGCTTCTTTTAGTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSESTALR*LLLVRQ
Trigger: CTGCCTGACTAAAAGAAGCCACCTCAGCGCAGTGGA...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATATGGACACTGGGACTaGGGTCTGACACTGAAGAAG +
Preference number: 2 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGYGHWD*GLTLKK
Trigger: CTTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGAAGTCACACAGCAAATaGGAAGGTGACATGGGACCG +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEKSHSK*EGDMGP
Trigger: CGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGAGGGCTCAAACGGGATTaGATGTTGAGGGCAGTGGTA +
Preference number: 2 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRGLKRD*MLRAVV
Trigger: TACCACTGCCCTCAACATTCAATCCCGTTTGAGCCC...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCAGCTAGAACTCAAGCTTaGGTCCCTAACCCATCCCCA +
Preference number: 2 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSARTQA*VPNPSP
Trigger: TGGGGATGGGTTAGGGACGCAAGCTTGAGTTCTAGC...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATTTGAGCCCAGAACCTaGCATGAATGGGCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSFEPRT*HEWAQK
Trigger: CTTCTGGGCCCATTCATGGCAGGTTCTGGGCTCAAA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 2 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 2 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCATCCCTTGGCCTCCTaGAGCAGCTCATTCCAACCC +
Preference number: 2 (lower is better)
Translates to: IFLKILRSPLSLPTALLCHPLAS*SSSFQP
Trigger: GGGTTGGAATGAGCTGCTGCAGGAGGCCAAGGGATG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGCACTGCTATGCACCTaGCCCAGCTCCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSALLCT*PSSCHA
Trigger: AGCATGGCAGGAGCTGGGGCAGGTGCATAGCAGTGC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCATCTGTCCCTTCCCACTaGACTGCTATGCACCTGCCC +
Preference number: 2 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPSVPSH*TAMHLP
Trigger: GGGCAGGTGCATAGCAGTGCAGTGGGAAGGGACAGA...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAGAGCTCAATGCACCGTaGACACCAGAGCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPELNAP*TPELLG
Trigger: CCCAAGGAGCTCTGGTGTGCACGGTGCATTGAGCTC...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CAA 90 bp CACTTTCTGACAGAGAGCTCAATGCACCGTGCACACCAGAGCTCCTaGGGAATGCGGTGGGTGAAAATTCAAAAAGTAGCATCCACTCAA +
Preference number: 2 (lower is better)
Translates to: HFLTESSMHRAHQSS*GMRWVKIQKVASTQ
Trigger: TTGAGTGGATGCTACTTTTTGAATTTTCACCCACCGCATTCCCAAGGAGCTCTGGTGTGCACGGTGCATTGAGCTCTCTGTCAGAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: QILVESEAKTANGYMARGISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSTGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR TCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAAAGTCACACAGCAAATaGGAAGGTGACATGGGACCG +
Preference number: 2 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKKSHSK*EGDMGP
Trigger: CGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTT...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR GCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTCTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: GQQVEEITIQPRLQNRRALPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTTTCTGGCTCCCTGAGTaGTGTAGAGAGGAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: GQQVEEITIQPRLQNRRAFWLPE*CREEAL
Trigger: GAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAA...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAACTGGACAGTCTGAACTaGGATGGAGAAAGTAGCATG +
Preference number: 2 (lower is better)
Translates to: STFLGTIWTLGLRSDTEELDSLN*DGESSM
Trigger: CATGCTACTTTCTCCATCCCAGTTCAGACTGTCCAG...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTAGCAGGGCACATGTGTaGGGTGAATACATAAGTAGA +
Preference number: 2 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGSRAHV*GEYISR
Trigger: TCTACTTATGTATTCACCCCACACATGTGCCCTGCT...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 90 bp GCTGCACAGGAGAGCTATGATAACTACCTAAAAATCTCTAAAGCATaGTTTCTGCCTTTGGTGGCCACAAGGGGAATGCTGAGGCCAACA +
Preference number: 2 (lower is better)
Translates to: AAQESYDNYLKISKA*FLPLVATRGMLRPT
Trigger: TGTTGGCCTCAGCATTCCCCTTGTGGCCACCAAAGGCAGAAACAATGCTTTAGAGATTTTTAGGTAGTTATCATAGCTCTCCTGTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGCTCCTCTATGCATCCTaGCCATGCTTTTCATATTTC +
Preference number: 2 (lower is better)
Translates to: TTTTHPRLPNIMECISRLLLYAS*PCFSYF
Trigger: GAAATATGAAAAGCATGGCCAGGATGCATAGAGGAG...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAGACTTCCTAATATCATaGAATGCATTTCAAGACTGG +
Preference number: 2 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQDFLIS*NAFQDW
Trigger: CCAGTCTTGAAATGCATTCCATGATATTAGGAAGTC...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTGAGAGAAAACAAAGTTaGGGGCAGAGCTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GQQVEEITIQPRLQNRRAERKQS*GQSSAW
Trigger: CCAGGCTGAGCTCTGCCCCCAACTTTGTTTTCTCTC...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 90 bp ATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTCAAACGGGATaGAATGTTGAGGGCAGTGGTAAGCAGATCCCCATCATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: ITIQPRLQNRRAQTG*NVEGSGKQIPIIWR
Trigger: TCTCCAGATGATGGGGATCTGCTTACCACTGCCCTCAACATTCAATCCCGTTTGAGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAACTGGAGAGCGAATGCTaGCTAGAGGAATTTCTATTC +
Preference number: 2 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKLESEC*LEEFLF
Trigger: GAATAGAAATTCCTCTAGCCAGCATTCGCTCTCCAG...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR GCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATCCTAAGGGAAATCACTaGCTTATAATTCTCTTATGG +
Preference number: 2 (lower is better)
Translates to: LCISSLPSSALSPEPAMNPKGNH*LIILLW
Trigger: CCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGG...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR GCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCACCTAATATCATGGAATaGATTTCAAGACTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPPNIME*ISRLEE
Trigger: CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGG...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CCA 90 bp GAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGTACCCAAGCTCATCGGCTTATAATTCTCTTATaGCTGCAGATAAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: EIQADPNLTPCSRTQAHRLIILL*LQIRCP
Trigger: AGGACATCTTATCTGCAGCCATAAGAGAATTATAAG...CCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CAA 90 bp AGCTATGATAACTACCTAAAAATCTCTAAAGCATTGTTTCTGCCTTaGGTGGCCACAAGGGGAATGCTGAGGCCAACAAGTGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: SYDNYLKISKALFLP*VATRGMLRPTSGRN
Trigger: ATTTCTTCCACTTGTTGGCCTCAGCATTCCCCTTGTGGCCACCAAAGGCAGAAACAATGCTTTAGAGATTTTTAGGTAGTTATCATAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 72 bp AGTGGTGGGCCGAGTCCGCAGCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAGGCGAGGCAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: SGGPSPQPAEGP*RGAQAEARQSS
Trigger: AGAGCTTTGCCTCGCCTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGGCTGCGGACTCGGCCCACCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp GGAGGGGAGCGCAGGCGGAGGCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACGGTGTCCAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GGERRRRRGKAL*SSGEETVSRRQ
Trigger: CTGCCTTCTGGACACCGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCGCCTCCGCCTGCGCTCCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp GCCAGGGAGCCGGATGGTCAGGCCAGTGCCTGGACATaGGACACAGGCCTAGGACCTTCTGAACACACCCCG +
Preference number: 3 (lower is better)
Translates to: AREPDGQASAWT*DTGLGPSEHTP
Trigger: CGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp ACTGCCTCAGCCAGAGGCCTGATGGTGTCCCTTCCCTaGGAGGGGCCCTTAGCCCCAGTCTCCTGTGCTACA +
Preference number: 3 (lower is better)
Translates to: TASARGLMVSLP*EGPLAPVSCAT
Trigger: TGTAGCACAGGAGACTGGGGCTAAGGGCCCCTCCCAGGGAAGGGACACCATCAGGCCTCTGGCTGAGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp GAGGGGAGGCGACTCGCCCAAGGTCACAAAGCCAGCTaGTGGCCGCATCTGACCTTGAACCATGGACTCCCC +
Preference number: 3 (lower is better)
Translates to: EGRRLAQGHKAS*WPHLTLNHGLP
Trigger: GGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTGACCTTGGGCGAGTCGCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp AGAGGGGGCAGGAAGAAAAGCGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGCAGAAGGACCCTGGAG +
Preference number: 3 (lower is better)
Translates to: RGGRKKSVRQQW*AESAASRRTLE
Trigger: CTCCAGGGTCCTTCTGCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCTTTTCTTCCTGCCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp CTCAGAGGGGGCAGGAAGAAAAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCCAGCAGAAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: LRGGRKKSVRQQ*WAESAASRRTL
Trigger: CAGGGTCCTTCTGCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCTTTTCTTCCTGCCCCCTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCTCAAGGAGGGGAACTaGACCGGCAGTGGGACCCCC +
Preference number: 3 (lower is better)
Translates to: WEREVGGPRPPALRSFHLLKEGN*TGSGTP
Trigger: GGGGGTCCCACTGCCGGTCAAGTTCCCCTCCTTGAG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCTCAAGGAGGGGAACTaGACCGGCAGTGGGACCCCC +
Preference number: 3 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLKEGN*TGSGTP
Trigger: GGGGGTCCCACTGCCGGTCAAGTTCCCCTCCTTGAG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp GACCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTaGGGGCCTGCAGCCAGGCTCCCCCAGGTCACTGGG +
Preference number: 3 (lower is better)
Translates to: DLNHSHQGLGNQ*GPAARLPQVTG
Trigger: CCCAGTGACCTGGGGGAGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp CTTGGTGCCAGGGAGCCGGATGGTCAGGCCAGTGCCTaGACATGCGACACAGGCCTAGGACCTTCTGAACAC +
Preference number: 3 (lower is better)
Translates to: LGAREPDGQASA*TCDTGLGPSEH
Trigger: GTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGCACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp ACTGGGGAACCCAGAACTAGGGCTGGGAAAGAGAAGTaGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCC +
Preference number: 3 (lower is better)
Translates to: TGEPRTRAGKEK*VVLGPQPCEAS
Trigger: GGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCAGCCCTAGTTCTGGGTTCCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp AGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTaGATCCCTACAGCTCACAAAGGCCAGAGGATGCCC +
Preference number: 3 (lower is better)
Translates to: RPLPQQDAGIRL*IPTAHKGQRMP
Trigger: GGGCATCCTCTGGCCTTTGTGAGCTGTAGGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp TTGTCTGGGAAGGGATGGAAAACAGCTGCTCCTGCCTaGGACTTGGTGCCAGGGAGCCGGATGGTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: LSGKGWKTAAPA*DLVPGSRMVRP
Trigger: TGGCCTGACCATCCGGCTCCCTGGCACCAAGTCCCAGGCAGGAGCAGCTGTTTTCCATCCCTTCCCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp GGAGAGGGCAGTGACAATGAGAGAACAGCCAGGCGCTaGCTTGGGAACTGCCGGTTTCTCAAGGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: GEGSDNERTARR*LGNCRFLKAAS
Trigger: GGAGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCATTGTCACTGCCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp GGGAGGCGACTCGCCCAAGGTCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAACCATGGACTCCCCATT +
Preference number: 3 (lower is better)
Translates to: GRRLAQGHKASW*PHLTLNHGLPI
Trigger: AATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTGACCTTGGGCGAGTCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp GTGGGCCAAAGTCACACAGCAAATGAGAAGGTGACATaGGACCGGAACCCTCCTCTCCTGCCTCCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: VGQSHTANEKVT*DRNPPLLPPPG
Trigger: CCCAGGGGGAGGCAGGAGAGGAGGGTTCCGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTTTGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp CAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTaGACACACCCCGCTTGCCAGACTCCAGACAGCAGA +
Preference number: 3 (lower is better)
Translates to: QCLDMRHRPRTF*THPACQTPDSR
Trigger: TCTGCTGTCTGGAGTCTGGCAAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp AGCCCTCATTTCCAACCCAGCACACGTCTGTACCAGTaGAGAACCAGACACACGGCAGGTGCAGGCAGCACG +
Preference number: 3 (lower is better)
Translates to: SPHFQPSTRLYQ*RTRHTAGAGST
Trigger: CGTGCTGCCTGCACCTGCCGTGTGTCTGGTTCTGCACTGGTACAGACGTGTGCTGGGTTGGAAATGAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGCCGCATCTGACCTaGAACCATGGACTCCCCATT +
Preference number: 3 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESWPHLT*NHGLPI
Trigger: AATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp TGTGAGTGGGCCAAAGTCACACAGCAAATGAGAAGGTaGCATGGGACCGGAACCCTCCTCTCCTGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: CEWAKVTQQMRR*HGTGTLLSCLP
Trigger: GGGGAGGCAGGAGAGGAGGGTTCCGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTTTGGCCCACTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp CAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTaGCTCCTGCTAGTCCTCTGGGAAATGCAGGTAGAA +
Preference number: 3 (lower is better)
Translates to: QALAWELPVSQG*LLLVLWEMQVE
Trigger: TTCTACCTGCATTTCCCAGAGGACTAGCAGGAGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp GACTCTGCATCCCTACAGCTCACAAAGGCCAGAGGATaGCCCTCTACCGCATCAGGGCTGCCAGACAGTTCT +
Preference number: 3 (lower is better)
Translates to: DSASLQLTKARG*PSTASGLPDSS
Trigger: AGAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGCTGTAGGGATGCAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp CCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATaGGCCCAGAAGGAACAGATGAGCTGGAGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: PQFSFEPRTCHE*AQKEQMSWRPK
Trigger: CTTGGGCCTCCAGCTCATCTGTTCCTTCTGGGCCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp CTCAGGGGTCATCTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATGCATCCTGAACACACCCCGCTaGCCAGACTCCAGACAGCAG +
Preference number: 3 (lower is better)
Translates to: LRGHLSQSCPLLESPLCILNTPR*PDSRQQ
Trigger: CTGCTGTCTGGAGTCTGGCAAGCGGGGTGTGTTCAG...GATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAGATGACCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCTCAATCCTCACAGATaGTTACAGCTAGAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWLNPHR*LQLEKP
Trigger: GGGCTTTTCTAGCTGTAACAATCTGTGAGGATTGAG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp CTGCCTCTTCCCTCCAGAGGGGATAGTGGGACACCTTaGGCTGGCCTGGGAGACCTCTCTAAAGGTCATTGT +
Preference number: 3 (lower is better)
Translates to: LPLPSRGDSGTP*AGLGDLSKGHC
Trigger: ACAATGACCTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGGGAAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 72 bp CCAGAACCTGCCATGAATGGGCCCAGAAGGAACAGATaGGCTGGAGGCCCAAGTCCTGGGCCTAAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: PEPAMNGPRRNR*AGGPSPGPKGN
Trigger: ATTTCCCTTAGGCCCAGGACTTGGGCCTCCAGCTCATCTGTTCCTTCTGGGCCCATTCATGGCAGGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 72 bp GAGCCTGACCTCACCCTAACAGCCATGCCTGGGCACTaGCTCTGTGTGTATGTTTTTGAGTCGGGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: EPDLTLTAMPGH*LCVYVFESGVC
Trigger: GCACACCCCCGACTCAAAAACATACACACAGAGTCAGTGCCCAGGCATGGCTGTTAGGGTGAGGTCAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 72 bp CTCCTCACTCAGCTCTGTGCCATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAAGGAGGGGAACTTGAC +
Preference number: 3 (lower is better)
Translates to: LLTQLCAISCHI*SPSGPQGGELD
Trigger: GTCAAGTTCCCCTCCTTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp CTCAGGGGTCATCTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATGCATCAAGAGGCCAGACCCTTaGGGTCCCCCAGGTCTAATG +
Preference number: 3 (lower is better)
Translates to: LRGHLSQSCPLLESPLCIKRPDP*GPPGLM
Trigger: CATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTT...GATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAGATGACCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 3 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESNATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 3 (lower is better)
Translates to: REVGGPRPPALRSFHLNPNATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCTCAAGGAGGGGAACTaGACCGGCAGTGGGACCCCC +
Preference number: 3 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSLKEGN*TGSGTP
Trigger: GGGGGTCCCACTGCCGGTCAAGTTCCCCTCCTTGAG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp CCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACTaGCCCGCCTCATCCAAGGCACTAACTAGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PEGSKSRGPYTH*PASSKALTSVC
Trigger: ACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp TGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTaGCTCAGCCAGAGGCCTGATGGTGTCCCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: WEMQVEMDPLCY*LSQRPDGVPSL
Trigger: CAGGGAAGGGACACCATCAGGCCTCTGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp AAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTaGTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCA +
Preference number: 3 (lower is better)
Translates to: KVAICTGFWLPE*CREEALISNPA
Trigger: TGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 72 bp TGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATaGCTAGGGGCCACCCTCCCTGTGGCACACCCACAT +
Preference number: 3 (lower is better)
Translates to: WLNLKPKQPMDT*LGATLPVAHPH
Trigger: ATGTGGGTGTGCCACAGGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR TCA 72 bp AGGAAGGGTCTTACCCAGGGTCACACAACAGCTGAATaGGAGCAAGGGCTAGAACTCAAGCTTGCGTCCCTA +
Preference number: 3 (lower is better)
Translates to: RKGLTQGHTTAE*EQGLELKLASL
Trigger: TAGGGACGCAAGCTTGAGTTCTAGCCCTTGCTCTCATTCAGCTGTTGTGTGACCCTGGGTAAGACCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp ACCACCACCCACCCCCGACTTCCTAATATCATGGAATaGATTTCAAGACTGGAAGAGCCCTCAGGGGTCATC +
Preference number: 3 (lower is better)
Translates to: TTTHPRLPNIME*ISRLEEPSGVI
Trigger: GATGACCCCTGAGGGCTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESLVRQI*VESEAK
Trigger: TTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 3 (lower is better)
Translates to: LRPRDWKRLSEVTHESDANATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR TCA 72 bp AACAAGGAAGGGTCTTACCCAGGGTCACACAACAGCTaGATGAGAGCAAGGGCTAGAACTCAAGCTTGCGTC +
Preference number: 3 (lower is better)
Translates to: NKEGSYPGSHNS*MRARARTQACV
Trigger: GACGCAAGCTTGAGTTCTAGCCCTTGCTCTCATTCAGCTGTTGTGTGACCCTGGGTAAGACCCTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 72 bp AAAGAGAATGTGAGTGGGCCAAAGTCACACAGCAAATaGGAAGGTGACATGGGACCGGAACCCTCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: KENVSGPKSHSK*EGDMGPEPSSP
Trigger: AGGAGAGGAGGGTTCCGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTTTGGCCCACTCACATTCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp GGACCAGAAATACAGGCAGACCCTAACTTAACACCCTaGTCACGTACCCAAGCTCATCGGCCCCTAAATTCA +
Preference number: 3 (lower is better)
Translates to: GPEIQADPNLTP*SRTQAHRPLNS
Trigger: TGAATTTAGGGGCCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp TGGGGCAGGATAATGTCTACTTTTCTGGGCACGATATaGACACTGGGACTGAGGTCTGACACTGAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: WGRIMSTFLGTI*TLGLRSDTEEG
Trigger: CCCTTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGACATTATCCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAATGGCCGCATCTGACCTaGAACCATGGACTCCCCATT +
Preference number: 3 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKWPHLT*NHGLPI
Trigger: AATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCA...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR TCA 72 bp CAGTCAAACCTGGACTGTCGGAGACCAAATGGTCTCTaGCCTCCTTCTGTAATCCTTTCACTGCACAGAAGG +
Preference number: 3 (lower is better)
Translates to: QSNLDCRRPNGL*PPSVILSLHRR
Trigger: CCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGTCTCCGACAGTCCAGGTTTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 72 bp AACTCTGAGGGAAGGAAAGAACAAAAGGTTGCGATTTaGACAGGGTTCTGGCTCCCTGAGTGCTGTAGAGAG +
Preference number: 3 (lower is better)
Translates to: NSEGRKEQKVAI*TGFWLPECCRE
Trigger: CTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCCCTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CCA 72 bp CCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTaGGAGACCTCTCTAAAGGTCATTGTGATAAAAATA +
Preference number: 3 (lower is better)
Translates to: PPEGIVGHLELA*ETSLKVIVIKI
Trigger: TATTTTTATCACAATGACCTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CCA 72 bp AGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTaGCTCCCTGAGTGCTGTAGAGAGGAAGCCCTCATT +
Preference number: 3 (lower is better)
Translates to: RKEQKVAICTGF*LPECCREEALI
Trigger: AATGAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CAA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTCAGGCAGATCTTGGTaGAATCTGAAGCCAAAACAG +
Preference number: 3 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRSGRSW*NLKPKQ
Trigger: CTGTTTTGGCTTCAGATTCAACCAAGATCTGCCTGA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp GCTGGAGGCCCAAGTCCTGGGCCTAAGGGAAATCACTaGCTTATAATTCTCTTATGGCTGCAGATAAGATGT +
Preference number: 3 (lower is better)
Translates to: AGGPSPGPKGNH*LIILLWLQIRC
Trigger: ACATCTTATCTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGGGCCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR GCA 72 bp CTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATaGATCCTGGCCATGCTTTTCATATTTCCCGTAACA +
Preference number: 3 (lower is better)
Translates to: LSQSCPLLESPL*ILAMLFIFPVT
Trigger: TGTTACGGGAAATATGAAAAGCATGGCCAGGATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATTCACCTACATACGTTaGATCCTCAGCCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGFTYIR*ILSQFH
Trigger: ATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR TCA 72 bp CATTGTTTCTGCCTTTGGTGGCCACAAGGGGAATGCTaGGGCCAACAAGTGGAAGAAATAACAATTCAGCCA +
Preference number: 3 (lower is better)
Translates to: HCFCLWWPQGEC*GQQVEEITIQP
Trigger: TGGCTGAATTGTTATTTCTTCCACTTGTTGGCCTCAGCATTCCCCTTGTGGCCACCAAAGGCAGAAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR GCA 72 bp CATCCACCAGAGTTCAGAGCTAGCCAGTCCATTCCATaGTTCCTACCCGATCAAAATCTAGAACCATCCAAA +
Preference number: 3 (lower is better)
Translates to: HPPEFRASQSIP*FLPDQNLEPSK
Trigger: TTTGGATGGTTCTAGATTTTGATCGGGTAGGAAGCATGGAATGGACTGGCTAGCTCTGAACTCTGGTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR-3UTR CAA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAATGGGAAGGGGAATTTaGACGTTTGTGGATTGCCTT +
Preference number: 3 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIMGRGI*TFVDCL
Trigger: AAGGCAATCCACAAACGTCAAAATTCCCCTTCCCAT...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCTCAATCCTCACAGATaGTTACAGCTAGAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSLNPHR*LQLEKP
Trigger: GGGCTTTTCTAGCTGTAACAATCTGTGAGGATTGAG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR GCA 72 bp TGTATGAATGTGGAAACTGAGACCTACAGACACACATaGAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: CMNVETETYRHT*SWSVRIQVSSP
Trigger: GGGACTTGAGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCACATTCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGTAACAAGTAACTCTTaGTCTCTCTCTTTCCCAATA +
Preference number: 3 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGVTSNS*SLSFPI
Trigger: TATTGGGAAAGAGAGAGACAAAGAGTTACTTGTTAC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR-3UTR CAA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCTCAATCCTCACAGATaGTTACAGCTAGAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: IFLKILRSPLSLPTALLCLNPHR*LQLEKP
Trigger: GGGCTTTTCTAGCTGTAACAATCTGTGAGGATTGAG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CCA 72 bp AATGTGGAAACTGAGACCTACAGACACACATGCAGTTaGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTT +
Preference number: 3 (lower is better)
Translates to: NVETETYRHTCS*SVRIQVSSPRF
Trigger: AAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTCAGGCAGATCTTGGTaGAATCTGAAGCCAAAACAG +
Preference number: 3 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSSGRSW*NLKPKQ
Trigger: CTGTTTTGGCTTCAGATTCAACCAAGATCTGCCTGA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSLVRQI*VESEAK
Trigger: TTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR TCA 72 bp AGAACCATCCAAAGATTTATTCTTTCATCCAATCAGTaGTCAGCCATAACCAAGCCAGTCATCCTCTCATCC +
Preference number: 3 (lower is better)
Translates to: RTIQRFILSSNQ*SAITKPVILSS
Trigger: GGATGAGAGGATGACTGGCTTGGTTATGGCTGATCACTGATTGGATGAAAGAATAAATCTTTGGATGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCTCACGGCAGTGGGCTaGAGGCTGTCCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWLTAVG*RLSWPG
Trigger: CCCCGGCCAGGACAGCCTGCAGCCCACTGCCGTGAG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGCCTGGGGGCCTGCTTaGCTCGGGGAGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSAWGPA*LGETTP
Trigger: GGGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGTGCCGTGGAGGGCCTaGCTCCGGCAGCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSVPWRA*LRQRGG
Trigger: TCCACCTCGCTGCCGGAGCCAGGCCCTCCACGGCAC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGGGGCTCCTCTCCATCTaGCTGGTGCCCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGGLLSI*LVPPGA
Trigger: GGCGCCAGGGGGCACCAGCCAGATGGAGAGGAGCCC...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGGCCTGGATGCGGGGTaGCTTGAGGCAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSGLDAG*LEAGGP
Trigger: TGGGCCTCCTGCCTCAAGTCACCCCGCATCCAGGCC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGAGGGCCTGGGGGCCTaGTTGGCTCGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLEGLGA*LARGDH
Trigger: GTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCCCTC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCTGGCCCTGTCGTCGTaGTGGGACGCCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWLALSS*WDAPCS
Trigger: GGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGTGCCCCCTGGCGCCTaGATCCCAAAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSVPPGA*IPKGLA
Trigger: GGCCAGGCCTTTTGGGATCCAGGCGCCAGGGGGCAC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGCCTGGGGGCCTGCTTaGCTCGGGGAGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPAWGPA*LGETTP
Trigger: GGGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGGATGCCCAGGGCTTTaGGCAGCTGCGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWGCPGL*AAAVSP
Trigger: AGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCCCAACGCTGGTTTCTaGGCCACTCTGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWPNAGF*ATLGPG
Trigger: CCCTGGGCCCAGAGTGGCCCAGAAACCAGCGTTGGG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGCTCCGGCCCAACGCTaGTTTCTGGGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWAPAQR*FLGHSG
Trigger: CCCAGAGTGGCCCAGAAACCAGCGTTGGGCCGGAGC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCAGGTGGAACTCAGGCTaGGCCCCGGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSRWNSG*APVHGL
Trigger: CAGGCCATGCACCGGGGCTCAGCCTGAGTTCCACCT...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCTGGAGGTGGGGCCGGTaGGGACTGCTGGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCWRWGR*GLLGLS
Trigger: CGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCA...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGGCCTGGATGCGGGGTaGCTTGAGGCAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFGLDAG*LEAGGP
Trigger: TGGGCCTCCTGCCTCAAGTCACCCCGCATCCAGGCC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGCCTCAGCCAGAGGCCTaGTGGTGTCCCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRPQPEA*WCPFPG
Trigger: CCCAGGGAAGGGACACCATCAGGCCTCTGGCTGAGG...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTCCCCCTGGTCCCTCTaGCGCCGCTTCTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSSPWSL*RRFSSA
Trigger: AGCGGATGAGAAGCGGCGGCAGAGGGACCAGGGGGA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGAGGGCCTGGGGGCCTaGTTGGCTCGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCEGLGA*LARGDH
Trigger: GTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCCCTC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGAGGGCTTTGGGCAGCTaGGGTGTCCCCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWRALGS*GVPWVT
Trigger: AGTCACCCAGGGGACACCGCAGCTGCCCAAAGCCCT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCCCACTGCACTGCTATaGACCTGCCCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWPTALL*TCPSSC
Trigger: GCAGGAGCTGGGGCAGGTGCATAGCAGTGCAGTGGG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGCTGAGCCCCGGTGCATaGCCTGGGAGGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGLSPGA*PGRLEG
Trigger: CCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAG...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCCTCTGTCGGGGCTCTaGGGACTGGGGTGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFPLSGL*GLGCRG
Trigger: TCCACGGCACCCCAGTCCCCAGAGCCCCGACAGAGG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTACCCCTCCATGCTGTaGCCAGGGACCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWYPSML*PGTPLS
Trigger: CGACAGAGGGGTCCCTGGCCACAGCATGGAGGGGTA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGTGCCCCCTGGCGCCTaGATCCCAAAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLVPPGA*IPKGLA
Trigger: GGCCAGGCCTTTTGGGATCCAGGCGCCAGGGGGCAC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTCCTGTCTGGCAAACTaGGGGGCTGGGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLSCLAN*GAGEPG
Trigger: CCCCGGCTCCCCAGCCCCCCAGTTTGCCAGACAGGA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGGCTTCGGCTTGGCCTaGATGCGGGGTGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWGFGLA*MRGDLR
Trigger: CCTCAAGTCACCCCGCATCCAGGCCAAGCCGAAGCC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCAGGCGGGGTCCGGGCTaGGCTTCGGGATGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCRRGPG*ASGCHS
Trigger: CGAGTGGCATCCCGAAGCCCAGCCCGGACCCCGCCT...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGGGGCGCAGCTGGTATaGCGGCTGCTTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFGAQLV*RLLGGL
Trigger: GAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLPGPRS*AWRARQ
Trigger: CTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGCCCCCTTGGGCAGGTTaGGCACCAGGTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGPPWAG*APGPRS
Trigger: GCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGG...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGGGAGACCACGCCCTaGAGGGAGACACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGETTP*RETRGR
Trigger: TCTCCCCCGTGTCTCCCTCCAGGGCGTGGTCTCCCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAGCCTGGGGGCCTGCTTaGCTCGGGGAGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKAAWGPA*LGETTP
Trigger: GGGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGC...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGAGCTGCGGTGTCCCCTaGGTGACTCTGCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWSCGVP*VTLQAE
Trigger: CTCTGCCTGCAGAGTCACCCAGGGGACACCGCAGCT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCCTCTCTGGAGCAGCTaGGTGGTTGGATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWPLWSS*VVGCPG
Trigger: CCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCAGGCTCAGCCCAGCATaGGCACTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSRLSPA*ALPPPP
Trigger: GGGTGGTGGAGGCAGTGCCCATGCTGGGCTGAGCCT...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGGGCAGAGCTCAGCCTaGCCGCAGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWGQSSA*PQELQN
Trigger: ATTCTGCAGCTCCTGCGGCCAGGCTGAGCTCTGCCC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCTCTGCCGGCGCCTGTTaGAGAGCTGGACGCCACGGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCSAGAC*RAGRHG
Trigger: CCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGA...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAGGTGGAACTCAGGCTaGGCCCCGGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLRWNSG*APVHGL
Trigger: CAGGCCATGCACCGGGGCTCAGCCTGAGTTCCACCT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCATGGAGGTGGGGCCGGTaGGGACTGCTGGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSWRWGR*GLLGLS
Trigger: CGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCA...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGCCTGGCCGTCCTGTTaGCCACTGATGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFAWPSC*PLMGAW
Trigger: CCAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCGAGGCAGCTCTTGGTaGGACCTTGGCAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWRGSSW*DLGRLL
Trigger: AAGGAGCCTGCCAAGGTCTCACCAAGAGCTGCCTCG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGGCGGAGGTGGGAGGTaGGGACCCAGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCGGGGR*GPSMVL
Trigger: CAGCACCATGCTGGGTCCTCACCTCCCACCTCCGCC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAGACCCTCGGCTGGCTaGCTCCACAGGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLRPSAG*LHRHWQ
Trigger: CTGCCAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLAGAWG*PSAHRV
Trigger: CACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGGGGCGTGGTGGCAGCTaGTCGCCCAGACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRGRGGS*SPRHLL
Trigger: CAAGAGATGTCTGGGCGAGCAGCTGCCACCACGCCC...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGGCCTCGGCCCCCAGTaGGAAGGGCTCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSGLGPQ*EGLLLH
Trigger: GTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCGAGGTGCTGGCTCCTaGTGGAAGTTGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSRGAGS*WKLEAS
Trigger: CGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGCACGGGAATTGGAGCTaGGAGGGGTGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRHGNWS*EGWSAG
Trigger: CCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTG...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCTGAGCCCCGGTGCATaGCCTGGGAGGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFLSPGA*PGRLEG
Trigger: CCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGTCTGCAGCTGGGCTGTaGACCTCAGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGSAAGL*TSAGGG
Trigger: CCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGA...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGGGCTCCTCTCCATCTaGCTGGTGCCCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSGLLSI*LVPPGA
Trigger: GGCGCCAGGGGGCACCAGCCAGATGGAGAGGAGCCC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSECPSC*QEPPGP
Trigger: AGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGCAGGAGGCCCACTCTaGTACCACCTCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPAGGPL*YHLLRR
Trigger: GCGGCGGAGGAGGTGGTACCAGAGTGGGCCTCCTGC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGTTTGGGCTTCGGCTTaGCCTGGATGCGGGGTGACT +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWVWASA*PGCGVT
Trigger: AGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAAC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAGGCGGGGTCCGGGCTaGGCTTCGGGATGCCACTCG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSRRGPG*ASGCHS
Trigger: CGAGTGGCATCCCGAAGCCCAGCCCGGACCCCGCCT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGGGGCGCAGCTGGTATaGCGGCTGCTTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCGAQLV*RLLGGL
Trigger: GAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPGPRS*AWRARQ
Trigger: CTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGGGAGACCACGCCCTaGAGGGAGACACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGETTP*RETRGR
Trigger: TCTCCCCCGTGTCTCCCTCCAGGGCGTGGTCTCCCC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAGCCCGGCGTCCAGGGTaGGGAGGTGGGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPARRPG*GGGQAL
Trigger: GAGAGCCTGCCCACCTCCCCACCCTGGACGCCGGGC...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGAGCAGCTGGGTGGTTaGATGCCCAGGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSEQLGG*MPRALG
Trigger: GCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGCCCTGTCGTCGTGCTaGGACGCCCCTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSALSSC*DAPCSS
Trigger: AGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGTTTCTGGGCCACTCTaGGCCCAGGGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAVSGPL*AQGQGW
Trigger: CCAGCCCTGGCCCTGGGCCCAGAGTGGCCCAGAAAC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCCCAACGCTGGTTTCTaGGCCACTCTGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFPNAGF*ATLGPG
Trigger: CCCTGGGCCCAGAGTGGCCCAGAAACCAGCGTTGGG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGGGCCACCCTCCCTGTaGCACACCCACATCTGCACA +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSGPPSL*HTHICT
Trigger: TGTGCAGATGTGGGTGTGCCACAGGGAGGGTGGCCC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCGTCCTGTTGACCACTaGTGGGGGCTTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSRPVDH*WGLGQC
Trigger: ACACTGGCCAAGCCCCCATCAGTGGTCAACAGGACG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCTGGGGCCAGCTGTGTaGGCCCTGGTCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESLGPAV*ALVSAP
Trigger: AGGAGCAGAGACCAGGGCTCACACAGCTGGCCCCAG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAGCTGGGCTGCAATCTaGTGGCTCCGCGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLSWAAI*WLRALA
Trigger: AGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCCACCTTCTCCAGGTaGCGCAGCAAGCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLATFSR*RSKLAS
Trigger: GGAGGCTAGCTTGCTGCGGCACCTGGAGAAGGTGGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGGGCCGGTGAGGACTaGTGGGCCTCTCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGAGED*WASRFW
Trigger: CCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPAGAWG*PSAHRV
Trigger: CACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGACATGGATTTGCGGCTaGCCCGGCGGGCCATCGACT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLTWICG*PGGPST
Trigger: AGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCGAGGTGCTGGCTCCTaGTGGAAGTTGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFRGAGS*WKLEAS
Trigger: CGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAGCTGGTATGGCGGCTaGTTGGTGGGCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESSWYGG*LVGSGR
Trigger: GCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTGAGGGCCTGGGGGCCTaGTTGGCTCGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTEGLGA*LARGDH
Trigger: GTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCCCTC...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGAGCCCCAGTCTCCTGTaGTACAAGGGACCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRSPSLL*YKGPSS
Trigger: GCTGCTGGGTCCCTTGTAGCACAGGAGACTGGGGCT...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGCCCTCCTCACCGCTaGTCTCCTCGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGPPHR*SPRLPE
Trigger: CTCTGGAAGCCGAGGAGAGCAGCGGTGAGGAGGGCC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCTGGCCCTGTCGTCGTaGTGGGACGCCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDALALSS*WDAPCS
Trigger: GGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTGGCACACCCACATCTaGACAGCCCCCTACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSWHTHI*TAPYRA
Trigger: AGCCCTGTAGGGGGCTGTGCAGATGTGGGTGTGCCA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGGACGCCACGGGAATTaGAGCTGGGAGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFGRHGN*SWEGWS
Trigger: TGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGACGCCACGGGAATTaGAGCTGGGAGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGRHGN*SWEGWS
Trigger: TGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCTGAGCCCCGGTGCATaGCCTGGGAGGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLSPGA*PGRLEG
Trigger: CCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCTCTGTCGGGGCTCTaGGGACTGGGGTGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPLSGL*GLGCRG
Trigger: TCCACGGCACCCCAGTCCCCAGAGCCCCGACAGAGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTGGGCCTCTCGGTTTTaGGACAGGTGCAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWWASRF*DRCSPL
Trigger: CAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTCCTCAGCCGGTGCCTaGGGTTGCCCATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFSSAGA*GCPSAH
Trigger: GTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGA...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTCCTCAGCCGGTGCCTaGGGTTGCCCATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLSSAGA*GCPSAH
Trigger: GTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAGACCTTGGTGGGCGTaGTGGCAGCTGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESRPWWA*WQLLAQ
Trigger: CTGGGCGAGCAGCTGCCACCACGCCCACCAAGGTCT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTAGACCTTGGTGGGCGTaGTGGCAGCTGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDARPWWA*WQLLAQ
Trigger: CTGGGCGAGCAGCTGCCACCACGCCCACCAAGGTCT...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCATCCTGTCTGGCAAACTaGGGGGCTGGGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKASCLAN*GAGEPG
Trigger: CCCCGGCTCCCCAGCCCCCCAGTTTGCCAGACAGGA...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCATCCTGTCTGGCAAACTaGGGGGCTGGGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSCLAN*GAGEPG
Trigger: CCCCGGCTCCCCAGCCCCCCAGTTTGCCAGACAGGA...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGAGSC*KLEASA
Trigger: GGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGAGSC*KLEASA
Trigger: GGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCAGGAGGCCCACTCTaGTACCACCTCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSAGGPL*YHLLRR
Trigger: GCGGCGGAGGAGGTGGTACCAGAGTGGGCCTCCTGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGCTCCGGCCCAACGCTaGTTTCTGGGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESAPAQR*FLGHSG
Trigger: CCCAGAGTGGCCCAGAAACCAGCGTTGGGCCGGAGC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGAACTTGACCGGCAGTaGGACCCCCGTGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFELDRQ*DPRGVR
Trigger: ACGAACCCCACGGGGGTCCCACTGCCGGTCAAGTTC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGGCTCTCCTTCTCCTaGGGATCCCCTGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGLSFS*GSPGTS
Trigger: GGACGTCCCAGGGGATCCCCAGGAGAAGGAGAGCCC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGGCCACCCTCCCTGTaGCACACCCACATCTGCACA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGPPSL*HTHICT
Trigger: TGTGCAGATGTGGGTGTGCCACAGGGAGGGTGGCCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCTGGGAAAGAGAAGTaGGTGGTCCTCGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLAGKEK*VVLGPQ
Trigger: CTGGGGGCCGAGGACCACCCACTTCTCTTTCCCAGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAGGCTCAGCCCAGCATaGGCACTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPRLSPA*ALPPPP
Trigger: GGGTGGTGGAGGCAGTGCCCATGCTGGGCTGAGCCT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCGTGGCTCTCCAAGGTaGACTCGTTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFRGSPR*TRSPSA
Trigger: GGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGTGGAGGTGGGGCCGGTaGGGACTGCTGGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVWRWGR*GLLGLS
Trigger: CGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCA...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCCGGTGGGTTCTGATTaGCATCGGTGGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFPVGSD*HRWLAD
Trigger: ATCCGCCAGCCACCGATGTCAATCAGAACCCACCGG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGCTGGACATGAAATCTaGGGCTGGGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFAGHEI*GWGPGA
Trigger: AGCTCCAGGCCCCCAGCCTCAGATTTCATGTCCAGC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGCCACCTTCTCCAGGTaGCGCAGCAAGCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCATFSR*RSKLAS
Trigger: GGAGGCTAGCTTGCTGCGGCACCTGGAGAAGGTGGC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGCATCAGCACACAGGGTaGTGGGTTTGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGHQHTG*WVWKQA
Trigger: GGCCTGCTTCCAAACCCAGCACCCTGTGTGCTGATG...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCATCAGCACACAGGGTaGTGGGTTTGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSHQHTG*WVWKQA
Trigger: GGCCTGCTTCCAAACCCAGCACCCTGTGTGCTGATG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGGGCGTGGTGGCAGCTaGTCGCCCAGACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCGRGGS*SPRHLL
Trigger: CAAGAGATGTCTGGGCGAGCAGCTGCCACCACGCCC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCATCTCCATCTGGCTGGTaGCCCCTGGCGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSPSGW*PLAPGS
Trigger: GGATCCAGGCGCCAGGGGGCACCAGCCAGATGGAGA...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGAGGCCGGGCTTCGCTaGCCCATCATCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAEAGLR*PIILLS
Trigger: GGAAAGGAGGATGATGGGGCAGCGAAGCCCGGCCTC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCCAGAATGCCCGTCTTaGTGGCAGGAACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCPECPS*WQEPPG
Trigger: GCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTGGCACACCCACATCTaGACAGCCCCCTACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLWHTHI*TAPYRA
Trigger: AGCCCTGTAGGGGGCTGTGCAGATGTGGGTGTGCCA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTGGGCCCCGTTCCACTaGGCTGAGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSWAPFH*AEVASF
Trigger: AAAAGAAGCCACCTCAGCGCAGTGGAACGGGGCCCA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCCAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTGAACACACCCCGCTTTGGGCTGCAATCTGCTaGCTCCGCGCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASAWTCDTGLGPSEHTPLWAAIC*LRALAS
Trigger: AGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCA...AAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACTGAGCCCCGGTGCATaGCCTGGGAGGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSLSPGA*PGRLEG
Trigger: CCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGTGCCGTGGAGGGCCTaGCTCCGGCAGCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPVPWRA*LRQRGG
Trigger: TCCACCTCGCTGCCGGAGCCAGGCCCTCCACGGCAC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTGCCGGTGAGGACTGCTaGGCCTCTCGGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PESQPPRFREPVRACSQAAGEDC*ASRFWD
Trigger: GTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGC...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGCCGGTGAGGACTGCTaGGCCTCTCGGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAAGEDC*ASRFWD
Trigger: GTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCAGCACACAGGGTGCTaGGTTTGGAAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFQHTGC*VWKQAL
Trigger: CAGGGCCTGCTTCCAAACCCAGCACCCTGTGTGCTG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCTTGGTGGGCGTGGTaGCAGCTGCTCGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPWWAW*QLLAQT
Trigger: TGTCTGGGCGAGCAGCTGCCACCACGCCCACCAAGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAGTGCCCCCTGGCGCCTaGATCCCAAAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPVPPGA*IPKGLA
Trigger: GGCCAGGCCTTTTGGGATCCAGGCGCCAGGGGGCAC...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESECPSC*QEPPGP
Trigger: AGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTACGCCTACCTCCCCCTaGTCCCTCTGCCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTTPTSP*SLCRRF
Trigger: GAAGCGGCGGCAGAGGGACCAGGGGGAGGTAGGCGT...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSAPAGS*RPRPPV
Trigger: CACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACTGCTTGGTGGGCTCTaGGCGCAGGACCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSLLGGL*AQDPVL
Trigger: GAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAGCGAGGGGCGCAGCTaGTATGGCGGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSEGRS*YGGCLV
Trigger: CACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGAGGGAGAGCCCCCTTaGGCAGGTTGGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSEGEPP*AGWAPG
Trigger: ACCTGGTGCCCAACCTGCCCAAGGGGGCTCTCCCTC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGCGGGCTCCGGGGACTaGTGCAGGACGAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVAGSGD*CRTKDR
Trigger: CCGGTCCTTCGTCCTGCACCAGTCCCCGGAGCCCGC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAACACGTCGGAGTCCGTaGGCGAGCGGCGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKATRRSP*ASGGRG
Trigger: TCCTCTACCGCCGCTCGCCCACGGACTCCGACGTGT...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGACTACATCCCAGTCCTaGCTGGCCCTGTCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLTTSQS*LALSSC
Trigger: GCACGACGACAGGGCCAGCCAGGACTGGGATGTAGT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGGGCAGAGCTCAGCCTaGCCGCAGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESGQSSA*PQELQN
Trigger: ATTCTGCAGCTCCTGCGGCCAGGCTGAGCTCTGCCC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTTTGAAGGGAGCACTCTaGGGGACTCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLKGAL*GTPGWA
Trigger: AGCCCAGCCAGGAGTCCCTCAGAGTGCTCCCTTCAA...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTGGGAGACCTCTCTAAAGATGGCCTGGGAGGCTTaGAGGGAGCACTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PPEGIVGHLELAWETSLKMAWEA*REHSEG
Trigger: TCCCTCAGAGTGCTCCCTTCAAGCCTCCCAGGCCAT...CTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCGGTGGGTTCTGATTaGCATCGGTGGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPVGSD*HRWLAD
Trigger: ATCCGCCAGCCACCGATGTCAATCAGAACCCACCGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCAAGGGGCGTCTCTCTaGGGCCGGGCTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRQGASL*GRASLP
Trigger: GGGCAGCGAAGCCCGGCCTCAGAGAGACGCCCCTTG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGCCTGGCCCTTCAGATaGGAAGACTTGGGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPAWPFR*EDLGSE
Trigger: CTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCGAGGCAGCTCTTGGTaGGACCTTGGCAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESRGSSW*DLGRLL
Trigger: AAGGAGCCTGCCAAGGTCTCACCAAGAGCTGCCTCG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCGAGGCAGCTCTTGGTaGGACCTTGGCAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCRGSSW*DLGRLL
Trigger: AAGGAGCCTGCCAAGGTCTCACCAAGAGCTGCCTCG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGGGCGTGGTGGCAGCTaGTCGCCCAGACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSGRGGS*SPRHLL
Trigger: CAAGAGATGTCTGGGCGAGCAGCTGCCACCACGCCC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCTCACGGCAGTGGGCTaGAGGCTGTCCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRLTAVG*RLSWPG
Trigger: CCCCGGCCAGGACAGCCTGCAGCCCACTGCCGTGAG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGTACCCAAGCTCATCGGGGCTCCGGGGACTGGTaGAGGACGAAGGACCGGCGG +
Preference number: 4 (lower is better)
Translates to: EIQADPNLTPCSRTQAHRGSGDW*RTKDRR
Trigger: CCGCCGGTCCTTCGTCCTGCACCAGTCCCCGGAGCC...CCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCGCCAGTGCCTGGACATaGGACACAGGCCTAGGACCT +
Preference number: 4 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGASAWT*DTGLGP
Trigger: AGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ATGAGAGAACAGCCAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTGCCTGGATGGTCAGGCCAGTaGCTGGACATGCGACACAGG +
Preference number: 4 (lower is better)
Translates to: MREQPGAGLGTAGFSRLPGWSGQ*LDMRHR
Trigger: CCTGTGTCGCATGTCCAGGCACTGGCCTGACCATCC...AGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGCACTGCTATGCACCTaGCCCAGCTCCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCALLCT*PSSCHA
Trigger: AGCATGGCAGGAGCTGGGGCAGGTGCATAGCAGTGC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGGCTGCAATCTGCTaGCTCCGCGCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESWAAIC*LRALAS
Trigger: AGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAACCTCTGTCGGGGCTCTaGGGACTGGGGTGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQPLSGL*GLGCRG
Trigger: TCCACGGCACCCCAGTCCCCAGAGCCCCGACAGAGG...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGTTGACATCTGCAGCTaGGCTGTGGACCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLVDICS*AVDLSW
Trigger: CCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAAC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCAGCACACAGGGTGCTaGGTTTGGAAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAQHTGC*VWKQAL
Trigger: CAGGGCCTGCTTCCAAACCCAGCACCCTGTGTGCTG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGACCTTGGTGGGCGTaGTGGCAGCTGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTRPWWA*WQLLAQ
Trigger: CTGGGCGAGCAGCTGCCACCACGCCCACCAAGGTCT...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCACTGTAGACCTTGGTaGGCGTGGTGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPHCRPW*AWWQLL
Trigger: GAGCAGCTGCCACCACGCCCACCAAGGTCTACAGTG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCTCACTGTAGACCTTaGTGGGCGTGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPHCRP*WAWWQL
Trigger: CAGCTGCCACCACGCCCACCAAGGTCTACAGTGAGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCCTGGCTGGTGCCCCCTaGCGCCTGGATCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTLAGAP*RLDPKR
Trigger: CCTTTTGGGATCCAGGCGCCAGGGGGCACCAGCCAG...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCATTATGTGTCTCTGTaGCCGGGGGCTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFHYVSL*PGAPVW
Trigger: CCAGACAGGAGCCCCCGGCCACAGAGACACATAATG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGAAGCCAGAGGGGCTGTaGACAAGGTCTCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRKPEGL*TRSQCR
Trigger: CCTACACTGAGACCTTGTCCACAGCCCCTCTGGCTT...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCACGCCTACCTCCCCCTaGTCCCTCTGCCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPTPTSP*SLCRRF
Trigger: GAAGCGGCGGCAGAGGGACCAGGGGGAGGTAGGCGT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACGCAGGAGGCCCACTCTaGTACCACCTCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHAGGPL*YHLLRR
Trigger: GCGGCGGAGGAGGTGGTACCAGAGTGGGCCTCCTGC...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGTTTGGGCTTCGGCTTaGCCTGGATGCGGGGTGACT +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPVWASA*PGCGVT
Trigger: AGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAAC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPPGPRS*AWRARQ
Trigger: CTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGTGAGGACCCAGCATaGTGCTGTTCTTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGEDPA*CCSSSA
Trigger: CGCTGAGGAAGAACAGCACCATGCTGGGTCCTCACC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCTTCCATCAGGGATCTaGAAGGCGCAGGGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLPSGI*KAQGVG
Trigger: GCCTACCCCCTGCGCCTTCCAGATCCCTGATGGAAG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAGGCAGACCCTCGGCTaGCTGACTCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSRQTLG*LTPQAL
Trigger: CAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCTGCCT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCTGGGAAAGAGAAGTaGGTGGTCCTCGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSAGKEK*VVLGPQ
Trigger: CTGGGGGCCGAGGACCACCCACTTCTCTTTCCCAGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCACCCCTGTTCCCATaGAGACAAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLAPLFP*RQAQSS
Trigger: TGAGCTCTGGGCTTGTCTCCATGGGAACAGGGGTGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGCGGGCTCTTCCATTaGTGGCCCTCAAGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGGLFH*WPSRVE
Trigger: TTCTACCCTTGAGGGCCACCAATGGAAGAGCCCGCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAACATCCCAGTCAGGCTaGCCGCAGAAGGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSTSQSG*PQKADP
Trigger: GGGGTCTGCCTTCTGCGGCCAGCCTGACTGGGATGT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGGTGTGAGGCCGCTTTaGGGCAATACCACAGGAATC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSGVRPL*GNTTGI
Trigger: GATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522122.1
3UTR CAA 72 bp CCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTaGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PHLWGCPKRPDP*GPPGLMSLLLA
Trigger: AGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CAA 72 bp AGGGCAGTGACAATGAGAGAACAGCCAGGCGCTGGCTaGGGAACTGCCGGTTTCTCAAGGCTGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RAVTMREQPGAG*GTAGFSRLPPA
Trigger: AGCAGGAGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCATTGTCACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGTGGAGGTGGGGCCGGTaGGGACTGCTGGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEWRWGR*GLLGLS
Trigger: CGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCA...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCCAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTGAACACACCCCGCTTCGCCCAGACATCTCTTaGTCTGCTGACACCACTAGG +
Preference number: 4 (lower is better)
Translates to: ASAWTCDTGLGPSEHTPLRPDIS*SADTTR
Trigger: CCTAGTGGTGTCAGCAGATCAAGAGATGTCTGGGCG...AAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGGGCTTGGCCAGTGTaGAGTGGACCTCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPGAWPV*SGPHCR
Trigger: TCTACAGTGAGGTCCACTTCACACTGGCCAAGCCCC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGGAGGCTGCCACGCTTaGGCCGAAGGCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVGGCHA*AEGCHS
Trigger: GGAATGGCAGCCTTCGGCTCAAGCGTGGCAGCCTCC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTGGGAGACCTCTCTAAAGCCCAGAAGGAACAGATaGGCTGGAGGCCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PPEGIVGHLELAWETSLKPRRNR*AGGPSP
Trigger: AGGACTTGGGCCTCCAGCTCATCTGTTCCTTCTGGG...CTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLTGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTGGGAGACCTCTCTAAAGAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PPEGIVGHLELAWETSLKNSFTL*RRLLKS
Trigger: GCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTT...CTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCGCCACCTTCTCCAGGTaGCGCAGCAAGCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTATFSR*RSKLAS
Trigger: GGAGGCTAGCTTGCTGCGGCACCTGGAGAAGGTGGC...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCCGGTTTTGGGACAGGTaGAGCCCATTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGRFWDR*SPLAVS
Trigger: GCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCG...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCTGTGGGACAACAGTTaGCGGTGGGTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSLWDNS*RWVLID
Trigger: GTCAATCAGAACCCACCGGCAACTGTTGTCCCACAG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCATCAGCACACAGGGTaGTGGGTTTGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCHQHTG*WVWKQA
Trigger: GGCCTGCTTCCAAACCCAGCACCCTGTGTGCTGATG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAATCTCCATCTGGCTGGTaGCCCCTGGCGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQSPSGW*PLAPGS
Trigger: GGATCCAGGCGCCAGGGGGCACCAGCCAGATGGAGA...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCTCTCCATCTGGCTGGTaGCCCCTGGCGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPSPSGW*PLAPGS
Trigger: GGATCCAGGCGCCAGGGGGCACCAGCCAGATGGAGA...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTCTCCATCTGGCTGGTaGCCCCTGGCGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSPSGW*PLAPGS
Trigger: GGATCCAGGCGCCAGGGGGCACCAGCCAGATGGAGA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTCCCCCTGGTCCCTCTaGCGCCGCTTCTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSPWSL*RRFSSA
Trigger: AGCGGATGAGAAGCGGCGGCAGAGGGACCAGGGGGA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGGCCTCGGCCCCCAGTaGGAAGGGCTCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGGLGPQ*EGLLLH
Trigger: GTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGCTGGGCTTCGGGATaGCACTCGGAAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LCISSLPSSALSPEPAMNGWASG*HSEGPG
Trigger: CCCGGGGCCTTCCGAGTGGCATCCCGAAGCCCAGCC...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTCACGGCAGTGGGCTaGAGGCTGTCCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELTAVG*RLSWPG
Trigger: CCCCGGCCAGGACAGCCTGCAGCCCACTGCCGTGAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGGGCCTGGGGGCCTaGTTGGCTCGGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEEGLGA*LARGDH
Trigger: GTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCCCTC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGATGGGCGCGAAGGCTaGCCCCGGCACAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPDGREG*PRHSSR
Trigger: TCGGCTGCTGTGCCGGGGGCAGCCTTCGCGCCCATC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGTTCTTCCTCAGCGATaGAGGGAAGCAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESVLPQR*REAGSW
Trigger: CCAGGAGCCTGCTTCCCTGCATCGCTGAGGAAGAAC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGAGGACCCAGCATGGTaGTGTTCTTCCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFEDPAW*CSSSAM
Trigger: CATCGCTGAGGAAGAACAGCACCATGCTGGGTCCTC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTTCTGGCTCCCTGAGTaGTGTAGAGAGGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFFWLPE*CREEAL
Trigger: GAGGGCTTCCTCTCTACAGCACTCAGGGAGCCAGAA...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCGGCCTTCAAGCCTTaGTTCTCAAAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPPAFKP*FSKPPA
Trigger: TGCCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCTGGCTCCGCGCCTTaGCTTCTTTCAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLAGSAP*LLSDPS
Trigger: AGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCCAGTGCCTGGACATGCGACACAGGCCTAGGACCTTCTGAACACACCCCGCTTACAGGTGCAGCCCATTaGCTGTCAGCAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ASAWTCDTGLGPSEHTPLTGAAH*LSAVLH
Trigger: ATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGT...AAGCGGGGTGTGTTCAGAAGGTCCTAGGCCTGTGTCGCATGTCCAGGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTTGGGCCTCTCGGTTTTaGGACAGGTGCAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAWASRF*DRCSPL
Trigger: CAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCA...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGTGGCTGGCGGATTGTaGCTGCTGTTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSVAGGL*LLLEVG
Trigger: ACCAACTTCTAACAGCAGCCACAATCCGCCAGCCAC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAAGTGGCAGGCTCTGTaGGACAACAGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPKWQAL*DNSCRW
Trigger: CCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTACAGGGTGCTGGGTTTaGAAGCAGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PESQPPRFREPVRACSQATGCWV*KQALCH
Trigger: ATGGCACAGGGCCTGCTTCCAAACCCAGCACCCTGT...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTACAGGGTGCTGGGTTTaGAAGCAGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDATGCWV*KQALCH
Trigger: ATGGCACAGGGCCTGCTTCCAAACCCAGCACCCTGT...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACAGCACACAGGGTGCTaGGTTTGGAAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKAQHTGC*VWKQAL
Trigger: CAGGGCCTGCTTCCAAACCCAGCACCCTGTGTGCTG...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGCTCCTCTCCATCTaGCTGGTGCCCCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGLLSI*LVPPGA
Trigger: GGCGCCAGGGGGCACCAGCCAGATGGAGAGGAGCCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTCATTATGTGTCTCTGTaGCCGGGGGCTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PESQPPRFREPVRACSQAHYVSL*PGAPVW
Trigger: CCAGACAGGAGCCCCCGGCCACAGAGACACATAATG...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCATTATGTGTCTCTGTaGCCGGGGGCTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESHYVSL*PGAPVW
Trigger: CCAGACAGGAGCCCCCGGCCACAGAGACACATAATG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGTTCTGGTTGGGTTTaGGCTTCGGCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGSGWV*ASAWPG
Trigger: TCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCGGAGAGGTTCTGGTTaGGTTTGGGCTTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCRRGSG*VWASAW
Trigger: CCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCCTCGGAGAGGTTCTaGTTGGGTTTGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSASERF*LGLGFG
Trigger: GCCGAAGCCCAAACCCAACCAGAACCTCTCCGAGGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAAGGCGGGGTCCGGGCTaGGCTTCGGGATGCCACTCG +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGRRGPG*ASGCHS
Trigger: CGAGTGGCATCCCGAAGCCCAGCCCGGACCCCGCCT...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCMAAAW*ALGAGP
Trigger: GGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCAT...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACAGCGAGGGGCGCAGCTaGTATGGCGGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHSEGRS*YGGCLV
Trigger: CACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCT...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCCCCCTTGGGCAGGTTaGGCACCAGGTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQPPWAG*APGPRS
Trigger: GCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGAGGGAGAGCCCCCTTaGGCAGGTTGGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVEGEPP*AGWAPG
Trigger: ACCTGGTGCCCAACCTGCCCAAGGGGGCTCTCCCTC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGGGAGACCACGCCCTaGAGGGAGACACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRGETTP*RETRGR
Trigger: TCTCCCCCGTGTCTCCCTCCAGGGCGTGGTCTCCCC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGGGTGGGGTCGGGGGTaGGGCTCTAGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPGWGRG*GSRWCR
Trigger: CCTGCACCACCTAGAGCCCCACCCCCGACCCCACCC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCAGGGGTCATCTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATGCATCTGCCAGGGAGCCGGATaGTCAGGCCAGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LRGHLSQSCPLLESPLCICQGAG*SGQCLD
Trigger: GTCCAGGCACTGGCCTGACCATCCGGCTCCCTGGCA...GATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAGATGACCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATGAGAGAACAGCCAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTGCCTAGAACAGCCAGGCGCTaGCTTGGGAACTGCCGGTTT +
Preference number: 4 (lower is better)
Translates to: MREQPGAGLGTAGFSRLPRTARR*LGNCRF
Trigger: AAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCT...AGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGCCCAGGGCCAGGGCTaGGGCTGGCTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQAQGQG*GWLSSS
Trigger: AGATGATGACAGCCAGCCCCAGCCCTGGCCCTGGGC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCAGCGTCAGACAGCAGTaGTGGGCCGAGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPSVRQQ*WAESAA
Trigger: GGCTGCGGACTCGGCCCACCACTGCTGTCTGACGCT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGAGGCTCAGCCCAGCATaGGCACTGCCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQRLSPA*ALPPPP
Trigger: GGGTGGTGGAGGCAGTGCCCATGCTGGGCTGAGCCT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTTCTGCCGGCGCCTGTTaGAGAGCTGGACGCCACGGG +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGSAGAC*RAGRHG
Trigger: CCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGA...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCATGGCCTGGGAGGCTTaGAGGGAGCACTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTMAWEA*REHSEG
Trigger: TCCCTCAGAGTGCTCCCTTCAAGCCTCCCAGGCCAT...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCAGGTGGAACTCAGGCTaGGCCCCGGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCRWNSG*APVHGL
Trigger: CAGGCCATGCACCGGGGCTCAGCCTGAGTTCCACCT...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCACCGGTGGGTTCTGATTaGCATCGGTGGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPPVGSD*HRWLAD
Trigger: ATCCGCCAGCCACCGATGTCAATCAGAACCCACCGG...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCGCCCAGACATCTCTTaGTCTGCTGACACCACTAGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPRPDIS*SADTTR
Trigger: CCTAGTGGTGTCAGCAGATCAAGAGATGTCTGGGCG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCACAAGGGGCGTCTCTCTaGGGCCGGGCTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSQGASL*GRASLP
Trigger: GGGCAGCGAAGCCCGGCCTCAGAGAGACGCCCCTTG...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGGCCTGGATGCGGGGTaGCTTGAGGCAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGGLDAG*LEAGGP
Trigger: TGGGCCTCCTGCCTCAAGTCACCCCGCATCCAGGCC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAATATTTCTCCATCCGTaGCTGGCGGCGGGCGTAGAG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSIFLHP*LAAGVE
Trigger: CTCTACGCCCGCCGCCAGTCACGGATGGAGAAATAT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAGGCTCCTTGATAGGTaGGAGGACAAAGAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPRLLDR*EDKERG
Trigger: CCCTCGCTCTTTGTCCTCTCACCTATCAAGGAGCCT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCGGAGGTGGGAGGTaGGGACCCAGCATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGGGGR*GPSMVL
Trigger: CAGCACCATGCTGGGTCCTCACCTCCCACCTCCGCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGAAGGCTTCCACACCTaGGCCTCGATCCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQEGFHT*ASIPAF
Trigger: GAACGCCGGGATCGAGGCTCAGGTGTGGAAGCCTTC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGTAGCAGCTGCTAGATaGGCCCAGACTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAVAAAR*AQTPNW
Trigger: CCAGTTTGGAGTCTGGGCTCATCTAGCAGCTGCTAC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ATGAGAGAACAGCCAGGCGCTGGCTTGGGAACTGCCGGTTTCTCAAGGCTGCCTGCAAAGGCAGCCAATTaGTTGGCTGACGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MREQPGAGLGTAGFSRLPAKAAN*LADEAR
Trigger: CCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGC...AGGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTGTTCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAAAGCTTCCCCCTGGATaGTCCTGCCGGCCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPKLPPG*SCRPSS
Trigger: GCTTGAAGGCCGGCAGGAGCATCCAGGGGGAAGCTT...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGGGGGCCGGTGAGGACTaGTGGGCCTCTCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRGAGED*WASRFW
Trigger: CCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCC...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGCACCTCCTCAGCCGGTaGCTGGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: CISSLPSSALSPEPAMNGHLLSR*LGLPIS
Trigger: GCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTG...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCAATTAGGAGTGTGCTaGATCTCACCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFQLGVC*ISPPQP
Trigger: CGGCTGAGGAGGTGAGATGCAGCACACTCCTAATTG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCCAGAATGCCCGTCTTaGTGGCAGGAACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQPECPS*WQEPPG
Trigger: GCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGCTGGTATGGCGGCTaGTTGGTGGGCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRSWYGG*LVGSGR
Trigger: GCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCT...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGCTGGTATGGCGGCTaGTTGGTGGGCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRSWYGG*LVGSGR
Trigger: GCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGCTCACGGCAGTGGGCTaGAGGCTGTCCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLLTAVG*RLSWPG
Trigger: CCCCGGCCAGGACAGCCTGCAGCCCACTGCCGTGAG...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCCTCCTCTGACTCTCTaGACTTTTGCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESPPLTL*TFAFLR
Trigger: GCGGAGGAAGGCAAAAGTGCAGAGAGTCAGAGGAGG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCCCCAGCTCCTGCCATaGTCCTACTGTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQPQLLP*SYCPQA
Trigger: TGCCTGGGGACAGTAGGAGCATGGCAGGAGCTGGGG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGCTGGCTCCGCGCCTTaGCTTCTTTCAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESAGSAP*LLSDPS
Trigger: AGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCACGGGAATTGGAGCTaGGAGGGGTGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPHGNWS*EGWSAG
Trigger: CCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAGGACGCCACGGGAATTaGAGCTGGGAGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQGRHGN*SWEGWS
Trigger: TGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCC...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGGTGCCGTGGAGGGCCTaGCTCCGGCAGCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLVPWRA*LRQRGG
Trigger: TCCACCTCGCTGCCGGAGCCAGGCCCTCCACGGCAC...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTCCTCTGTCGGGGCTCTaGGGACTGGGGTGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGPLSGL*GLGCRG
Trigger: TCCACGGCACCCCAGTCCCCAGAGCCCCGACAGAGG...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCACAGGTGCAGCCCATTaGCTGTCAGCAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESTGAAH*LSAVLH
Trigger: ATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGCCGGTGAGGACTGCTaGGCCTCTCGGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPAGEDC*ASRFWD
Trigger: GTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLAAVRS*CGERGT
Trigger: AGTGCCACGCTCACCACACCAACTTCTAACAGCAGC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLIDIGG*RIVAAV
Trigger: AACAGCAGCCACAATCCGCCAGCCACCGATGTCAAT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGTTGGATGCTAGAAAGTaGCAGGCTCTGTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGLDARK*QALWDN
Trigger: GTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAA...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCCACTGTAGACCTTGGTaGGCGTGGTGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTHCRPW*AWWQLL
Trigger: GAGCAGCTGCCACCACGCCCACCAAGGTCTACAGTG...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGTGCCCCCTGGCGCCTaGATCCCAAAAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYVPPGA*IPKGLA
Trigger: GGCCAGGCCTTTTGGGATCCAGGCGCCAGGGGGCAC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVECPSC*QEPPGP
Trigger: AGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTCAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: PESQPPRFREPVRACSQAQIQQV*IRGHLG
Trigger: CCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTG...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPQIQQV*IRGHLG
Trigger: CCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRAPAGS*RPRPPV
Trigger: CACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGC...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACGGCTTCGGCTTGGCCTaGATGCGGGGTGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHGFGLA*MRGDLR
Trigger: CCTCAAGTCACCCCGCATCCAGGCCAAGCCGAAGCC...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACGGAGAGGTTCTGGTTaGGTTTGGGCTTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSRRGSG*VWASAW
Trigger: CCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYMAAAW*ALGAGP
Trigger: GGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCAT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGGCGCAGCTGGTATaGCGGCTGCTTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGAQLV*RLLGGL
Trigger: GAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGCGAGGGGCGCAGCTaGTATGGCGGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRSEGRS*YGGCLV
Trigger: CACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCACCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPPGPRS*AWRARQ
Trigger: CTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGG...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAGCCTGGGGGCCTGCTTaGCTCGGGGAGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKAWGPA*LGETTP
Trigger: GGGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGC...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGTCCACGAGGGAGACATaGGCGGTGGCGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLSTRET*AVAAAA
Trigger: CGCTGCCGCCGCCACCGCCCATGTCTCCCTCGTGGA...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAGGTAGAGGAAGGGCCTaGGAGGCGCGGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIGRGRA*EARAAG
Trigger: GCCCGCTGCCCGCGCCTCCCAGGCCCTTCCTCTACC...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCGGGGAGGGACGAGTATaGAACCCTGAAGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGGEGRV*NPEGSK
Trigger: CTTGCTACCTTCAGGGTTCCATACTCGTCCCTCCCC...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTGGTCAGGCCAGTGCCTaGACATGCGACACAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTGQASA*TCDTGL
Trigger: TAGGCCTGTGTCGCATGTCCAGGCACTGGCCTGACC...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGCTGATTCACAGAATTaGGGTGAGGTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSADSQN*GEVWLR
Trigger: TCTCAGCCAGACCTCACCCCAATTCTGTGAATCAGC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCAGCTGTGTGAGCCCTaGTCTCTGCTCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCQLCEP*SLLLTQ
Trigger: CTGTGTAAGGAGCAGAGACCAGGGCTCACACAGCTG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCCCTTGTTCCTCTCTaGAGCAGCTGGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPLVPL*SSWVVG
Trigger: TCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGGCCAGGGCTGGGGCTaGCTGTCATCATCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYGQGWG*LSSSAR
Trigger: CCGGGCAGATGATGACAGCCAGCCCCAGCCCTGGCC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCAGTGGGACCCCCGTaGGGTTCGTTACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSAVGPP*GSLLEA
Trigger: TGCTTCAAGTAACGAACCCCACGGGGGTCCCACTGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGAACTTGACCGGCAGTaGGACCCCCGTGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQELDRQ*DPRGVR
Trigger: ACGAACCCCACGGGGGTCCCACTGCCGGTCAAGTTC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACAGCCAATGGATACATaGCTAGGGGCCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSQPMDT*LGATLP
Trigger: AGGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGAGAGAAAACAAAGTTaGGGGCAGAGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLERKQS*GQSSAW
Trigger: CCAGGCTGAGCTCTGCCCCCAACTTTGTTTTCTCTC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CAA 72 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTaGCGAAGCTTCCATCTGAATCCTGCCACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPA*RSFHLNPATCV
Trigger: GACACAAGTGGCAGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAGCCAATTGCTTGGCTaGCGAAGCCAGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESSQLLG*RSQENP
Trigger: GGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR TCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCTGCTAGGTCCTCCCTaGAGCCAAGCTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCLLGPP*SQASPW
Trigger: CCAGGGGGAAGCTTGGCTTCAGGGAGGACCTAGCAG...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GATGGGAAGGGGAATTTTGACGTTTGTGGATTGCCTTGGCCAAAGCCACCATTATCTGCCGGCGCCTGTTaGAGAGCTGGACGCCACGGG +
Preference number: 4 (lower is better)
Translates to: DGKGNFDVCGLPWPKPPLSAGAC*RAGRHG
Trigger: CCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGA...TAATGGTGGCTTTGGCCAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTCTGCCGGCGCCTGTTaGAGAGCTGGACGCCACGGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGSAGAC*RAGRHG
Trigger: CCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACTTGAAGGGAGCACTCTaGGGGACTCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHLKGAL*GTPGWA
Trigger: AGCCCAGCCAGGAGTCCCTCAGAGTGCTCCCTTCAA...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGATGGCCTGGGAGGCTTaGAGGGAGCACTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQMAWEA*REHSEG
Trigger: TCCCTCAGAGTGCTCCCTTCAAGCCTCCCAGGCCAT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGTTGCCGGTGGGTTCTaGTTGACATCGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQVAGGF*LTSVAG
Trigger: GCCAGCCACCGATGTCAATCAGAACCCACCGGCAAC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGCTGGACATGAAATCTaGGGCTGGGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVAGHEI*GWGPGA
Trigger: AGCTCCAGGCCCCCAGCCTCAGATTTCATGTCCAGC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGGCTGGACATGAAATCTaGGGCTGGGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLAGHEI*GWGPGA
Trigger: AGCTCCAGGCCCCCAGCCTCAGATTTCATGTCCAGC...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGCCTGGCCGTCCTGTTaGCCACTGATGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LCISSLPSSALSPEPAMNAWPSC*PLMGAW
Trigger: CCAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGC...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGATACAGGACAGAATATaGGGGAGGAGACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLIQDRI*GRRPHP
Trigger: TGGGTGAGGTCTCCTCCCTCATATTCTGTCCTGTAT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCATGGAGAAAGTAGCATaGCAGGGACCCGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGMEKVA*QGPGEN
Trigger: ATTCTCCCCGGGTCCCTGTCATGCTACTTTCTCCAT...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGTGGGGTTCGTTACTTaGAGCAGAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESVGFVT*SRRKAS
Trigger: GGAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCAC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAGACCCTCGGCTGGCTaGCTCCACAGGCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYRPSAG*LHRHWQ
Trigger: CTGCCAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTGCGAAGCTTCCATCTaGATCCTGCCACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLCEASI*ILPLVS
Trigger: AGACACAAGTGGCAGGATTCAGATGGAAGCTTCGCA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGAGGAAGGGAACCCTaGCCCCTAGCAGCACGGAAG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRGGREP*PLAARK
Trigger: CTTCCGTGCTGCTAGGGGTCAGGGTTCCCTTCCTCC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGATCCTCTCATCCAACTaGGAGTCTTCTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWILSSN*ESSNSS
Trigger: GGAGGAATTAGAAGACTCTCAGTTGGATGAGAGGAT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCGCCACCTTCTCCAGGTaGCGCAGCAAGCTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCATFSR*RSKLAS
Trigger: GGAGGCTAGCTTGCTGCGGCACCTGGAGAAGGTGGC...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTCACCTCCTCAGCCGGTaGCTGGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGHLLSR*LGLPIS
Trigger: GCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTG...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCACCTCCTCAGCCGGTaGCTGGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYHLLSR*LGLPIS
Trigger: GCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAGGGCGTGGTGGCAGCTaGTCGCCCAGACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAGRGGS*SPRHLL
Trigger: CAAGAGATGTCTGGGCGAGCAGCTGCCACCACGCCC...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTTTCCACCATGGGGCTaGGGGACATTATGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLFPPWG*GTLCVS
Trigger: AGAGACACATAATGTCCCGCAGCCCCATGGTGGAAA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGCCAGAATGCCCGTCTTaGTGGCAGGAACCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CISSLPSSALSPEPAMNGPECPS*WQEPPG
Trigger: GCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGG...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGACATGGATTTGCGGCTaGCCCGGCGGGCCATCGACT +
Preference number: 4 (lower is better)
Translates to: CISSLPSSALSPEPAMNGTWICG*PGGPST
Trigger: AGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGT...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGGCCTCGGCCCCCAGTaGGAAGGGCTCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAGLGPQ*EGLLLH
Trigger: GTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQGPVTR*WLLLEV
Trigger: AACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGGCTGGGCTTCGGGATaGCACTCGGAAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFGWASG*HSEGPG
Trigger: CCCGGGGCCTTCCGAGTGGCATCCCGAAGCCCAGCC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAGCTGGTATGGCGGCTaGTTGGTGGGCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYSWYGG*LVGSGR
Trigger: GCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAGGGGGCTGCTCATGCTaGTCCCGCGACCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIGGCSC*SRDLAP
Trigger: GGGAGCCAGGTCGCGGGAGCAGCATGAGCAGCCCCC...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAATGGGGCTCTAGGTGGTaGAGGAGGCCTCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEEWGSRW*RRPRRG
Trigger: TCCCCGCCGAGGCCTCCTGCACCACCTAGAGCCCCA...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCACTAGCTAGGTCAGAGTaGACTGGGGAAGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPLARSE*TGEGMG
Trigger: CCCCATCCCTTCCCCAGTGCACTCTGACCTAGCTAG...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGCGCTGGCTTGGGAACTaGCGGTTTCTCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVRWLGN*RFLKAA
Trigger: GGCAGCCTTGAGAAACCGGCAGTTCCCAAGCCAGCG...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCGTGAGCCCTGGTCTCTaGTCCTTACACAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTVSPGL*SLHSLL
Trigger: GAGGAGGCTGTGTAAGGAGCAGAGACCAGGGCTCAC...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCTGGGCCCCGTTCCACTaGGCTGAGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTWAPFH*AEVASF
Trigger: AAAAGAAGCCACCTCAGCGCAGTGGAACGGGGCCCA...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGAACTGGAGAGCGAATaGTGGCTAGAGGAATTTCTA +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWELESE*WLEEFL
Trigger: TAGAAATTCCTCTAGCCAGCATTCGCTCTCCAGTTC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGTACCCAAGCTCATCGGAGCCAAGCTTCCCCCTaGATGCTCCTGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EIQADPNLTPCSRTQAHRSQASP*MLLPAF
Trigger: GAAGGCCGGCAGGAGCATCCAGGGGGAAGCTTGGCT...CCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACTGGAGCTGGGAGGGGTaGTCAGCTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHWSWEG*SAGLQS
Trigger: AGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCA...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAGGACGCCACGGGAATTaGAGCTGGGAGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAGRHGN*SWEGWS
Trigger: TGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCC...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAGTGCCGTGGAGGGCCTaGCTCCGGCAGCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKVPWRA*LRQRGG
Trigger: TCCACCTCGCTGCCGGAGCCAGGCCCTCCACGGCAC...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAAAGTGGCAGGCTCTGTaGGACAACAGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPKWQAL*DNSCRW
Trigger: CCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTT...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTACTAGGGTGTTGGGCTaGATGTCAATGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDATRVLG*MSMSRE
Trigger: CTCCCTGCTCATTGACATCCAGCCCAACACCCTAGT...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGAGACCTTGGTGGGCGTaGTGGCAGCTGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSERPWWA*WQLLAQ
Trigger: CTGGGCGAGCAGCTGCCACCACGCCCACCAAGGTCT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTGGCTGGTGCCCCCTaGCGCCTGGATCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELAGAP*RLDPKR
Trigger: CCTTTTGGGATCCAGGCGCCAGGGGGCACCAGCCAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTCCTGTCTGGCAAACTaGGGGGCTGGGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGSCLAN*GAGEPG
Trigger: CCCCGGCTCCCCAGCCCCCCAGTTTGCCAGACAGGA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCCTCCTTTCCACCATaGGGCTGCGGGACATTATGT +
Preference number: 4 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGSSFPP*GCGTLC
Trigger: ACATAATGTCCCGCAGCCCCATGGTGGAAAGGAGGA...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTTCCTCCTTTCCACCATaGGGCTGCGGGACATTATGT +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDASSFPP*GCGTLC
Trigger: ACATAATGTCCCGCAGCCCCATGGTGGAAAGGAGGA...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAAGCCAGAGGGGCTGTaGACAAGGTCTCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSKPEGL*TRSQCR
Trigger: CCTACACTGAGACCTTGTCCACAGCCCCTCTGGCTT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCACTTGGGGTCGGAGCTaGGATACAGGACAGAATATG +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFTWGRS*DTGQNM
Trigger: CATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGT...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGGAGSC*KLEASA
Trigger: GGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYGAGSC*KLEASA
Trigger: GGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAGTTTGGGCTTCGGCTTaGCCTGGATGCGGGGTGACT +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQVWASA*PGCGVT
Trigger: AGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAAC...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACGCCTCGGAGAGGTTCTaGTTGGGTTTGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHASERF*LGLGFG
Trigger: GCCGAAGCCCAAACCCAACCAGAACCTCTCCGAGGC...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGCCTCGGAGAGGTTCTaGTTGGGTTTGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQASERF*LGLGFG
Trigger: GCCGAAGCCCAAACCCAACCAGAACCTCTCCGAGGC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGGGGGCGCAGCTGGTATaGCGGCTGCTTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLGAQLV*RLLGGL
Trigger: GAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCC...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGGGGAGACCACGCCCTaGAGGGAGACACGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEGETTP*RETRGR
Trigger: TCTCCCCCGTGTCTCCCTCCAGGGCGTGGTCTCCCC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTCAGGGGTCATCTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATGCATCCTGACCCCTCATCTCTaGGGCTGCCCAAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRGHLSQSCPLLESPLCILTPHL*GCPKRP
Trigger: TGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAG...GATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAGATGACCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGACAGCTGCTCCTGCCTaGGACTTGGTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRTAAPA*DLVPGS
Trigger: GCTCCCTGGCACCAAGTCCCAGGCAGGAGCAGCTGT...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAAGGAACAGATGAGCTaGAGGCCCAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTKEQMS*RPKSWA
Trigger: GGCCCAGGACTTGGGCCTCCAGCTCATCTGTTCCTT...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCCTCTCTGGAGCAGCTaGGTGGTTGGATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRPLWSS*VVGCPG
Trigger: CCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCGCCCTGTCGTCGTGCTaGGACGCCCCTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECALSSC*DAPCSS
Trigger: AGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGC...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCATCCCAGTCCTGGCTaGCCCTGTCGTCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYHPSPG*PCRRAG
Trigger: CCCAGCACGACGACAGGGCCAGCCAGGACTGGGATG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCACTACATCCCAGTCCTaGCTGGCCCTGTCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPTTSQS*LALSSC
Trigger: GCACGACGACAGGGCCAGCCAGGACTGGGATGTAGT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGACCAGCAGAAGGACCCTaGAGGGGAGCGCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRPAEGP*RGAQAE
Trigger: CTCCGCCTGCGCTCCCCTCCAGGGTCCTTCTGCTGG...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCACTGCGCTGAGGTaGCTTCTTTTAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESSTALR*LLLVRQ
Trigger: CTGCCTGACTAAAAGAAGCCACCTCAGCGCAGTGGA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGCAAAGAGAATGTGAGTaGGCCAAAGTCACACAGCAA +
Preference number: 4 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWQRECE*AKVTQQ
Trigger: TTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCCCACAAAGCCTGGTTTaGTCGGGGGCTGTATCATAT +
Preference number: 4 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFPQSLV*SGAVSY
Trigger: ATATGATACAGCCCCCGACCAAACCAGGCTTTGTGG...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCCACAAAGCCTGGTTTaGTCGGGGGCTGTATCATAT +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLPQSLV*SGAVSY
Trigger: ATATGATACAGCCCCCGACCAAACCAGGCTTTGTGG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGAGAGAAAACAAAGTTaGGGGCAGAGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESERKQS*GQSSAW
Trigger: CCAGGCTGAGCTCTGCCCCCAACTTTGTTTTCTCTC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGTGGCTCTCCAAGGTaGACTCGTTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRRGSPR*TRSPSA
Trigger: GGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCCTGGCCGTCCTGTTaGCCACTGATGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGAWPSC*PLMGAW
Trigger: CCAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCAAGGGGCGTCTCTCTaGGGCCGGGCTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCQGASL*GRASLP
Trigger: GGGCAGCGAAGCCCGGCCTCAGAGAGACGCCCCTTG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CCTCCAGAGGGGATAGTGGGACACCTTGAGCTGGCCTGGGAGACCTCTCTAAAGATACAGGACAGAATATaGGGGAGGAGACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: PPEGIVGHLELAWETSLKIQDRI*GRRPHP
Trigger: TGGGTGAGGTCTCCTCCCTCATATTCTGTCCTGTAT...CTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTGTCCCACTATCCCCTCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCGCCTGGCCCTTCAGATaGGAAGACTTGGGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCAWPFR*EDLGSE
Trigger: CTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGC...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCCTGGCCCTTCAGATaGGAAGACTTGGGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRAWPFR*EDLGSE
Trigger: CTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGGCCTGGATGCGGGGTaGCTTGAGGCAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFGLDAG*LEAGGP
Trigger: TGGGCCTCCTGCCTCAAGTCACCCCGCATCCAGGCC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACATATTTCTCCATCCGTaGCTGGCGGCGGGCGTAGAG +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHIFLHP*LAAGVE
Trigger: CTCTACGCCCGCCGCCAGTCACGGATGGAGAAATAT...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGTGGGGTTCGTTACTTaGAGCAGAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSVGFVT*SRRKAS
Trigger: GGAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCAC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPRGKAL*SSGEET
Trigger: CGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCAAGTCACACAGCAAATaGGAAGGTGACATGGGACCG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCKSHSK*EGDMGP
Trigger: CGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTT...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCCTTTCATCCAATCAGTaGTCAGCCATAACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSLSSNQ*SAITKP
Trigger: TGGCTTGGTTATGGCTGATCACTGATTGGATGAAAG...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCCCCCTGGATGCTCCTaGCGGCCTTCAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYPPGCS*RPSSLG
Trigger: ACCAAGGCTTGAAGGCCGGCAGGAGCATCCAGGGGG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCATCAGCACACAGGGTaGTGGGTTTGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQHQHTG*WVWKQA
Trigger: GGCCTGCTTCCAAACCCAGCACCCTGTGTGCTGATG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEAGAWG*PSAHRV
Trigger: CACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCTCCTCAGCCGGTaGCTGGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGHLLSR*LGLPIS
Trigger: GCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCTTTCCACCATGGGGCTaGGGGACATTATGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCFPPWG*GTLCVS
Trigger: AGAGACACATAATGTCCCGCAGCCCCATGGTGGAAA...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGAGGCCGGGCTTCGCTaGCCCATCATCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGEAGLR*PIILLS
Trigger: GGAAAGGAGGATGATGGGGCAGCGAAGCCCGGCCTC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGGCCGGGCTTCGCTaGCCCATCATCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEEAGLR*PIILLS
Trigger: GGAAAGGAGGATGATGGGGCAGCGAAGCCCGGCCTC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTACATGGATTTGCGGCTaGCCCGGCGGGCCATCGACT +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGTWICG*PGGPST
Trigger: AGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGT...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGTCCCCCTGGTCCCTCTaGCGCCGCTTCTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLSPWSL*RRFSSA
Trigger: AGCGGATGAGAAGCGGCGGCAGAGGGACCAGGGGGA...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACTCCCCCTGGTCCCTCTaGCGCCGCTTCTCATCCGCT +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDSPWSL*RRFSSA
Trigger: AGCGGATGAGAAGCGGCGGCAGAGGGACCAGGGGGA...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACCCGGTTTCTCAAGGCTaGCTCCTGCTAGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHPVSQG*LLLVLW
Trigger: CCAGAGGACTAGCAGGAGGCAGCCTTGAGAAACCGG...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCLCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCTCTGTCCCTTCCCACTaGACTGCTATGCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPSVPSH*TAMHLP
Trigger: GGGCAGGTGCATAGCAGTGCAGTGGGAAGGGACAGA...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCCTCCACCACCCCTTaGCCCACTGGGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGASTTP*PTGEPR
Trigger: TCTGGGTTCCCCAGTGGGGCAAGGGGTGGTGGAGGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCGCTGGCTCCGCGCCTTaGCTTCTTTCAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTAGSAP*LLSDPS
Trigger: AGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGC...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTGGAGCTGGGAGGGGTaGTCAGCTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRWSWEG*SAGLQS
Trigger: AGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGTGTCCCCTCTGGCCGTaGCTCTCCAAGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRCPLWP*LSKVNS
Trigger: CGAGTTCACCTTGGAGAGCCACGGCCAGAGGGGACA...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCATGTCCCCTCTGGCCGTaGCTCTCCAAGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDACPLWP*LSKVNS
Trigger: CGAGTTCACCTTGGAGAGCCACGGCCAGAGGGGACA...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTGTCCCCTCTGGCCGTaGCTCTCCAAGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRCPLWP*LSKVNS
Trigger: CGAGTTCACCTTGGAGAGCCACGGCCAGAGGGGACA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGTGGGCCTCTCGGTTTTaGGACAGGTGCAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVWASRF*DRCSPL
Trigger: CAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCA...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAGTTGACATCTGCAGCTaGGCTGTGGACCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQVDICS*AVDLSW
Trigger: CCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAAC...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAACTAGGGTGTTGGGCTaGATGTCAATGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSTRVLG*MSMSRE
Trigger: CTCCCTGCTCATTGACATCCAGCCCAACACCCTAGT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGCCTTGGTGGGCGTGGTaGCAGCTGCTCGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLPWWAW*QLLAQT
Trigger: TGTCTGGGCGAGCAGCTGCCACCACGCCCACCAAGG...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCCTTGGTGGGCGTGGTaGCAGCTGCTCGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDPWWAW*QLLAQT
Trigger: TGTCTGGGCGAGCAGCTGCCACCACGCCCACCAAGG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCACTGTAGACCTTGGTaGGCGTGGTGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCHCRPW*AWWQLL
Trigger: GAGCAGCTGCCACCACGCCCACCAAGGTCTACAGTG...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCACCTCACTGTAGACCTTaGTGGGCGTGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAPHCRP*WAWWQL
Trigger: CAGCTGCCACCACGCCCACCAAGGTCTACAGTGAGG...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GATGGGAAGGGGAATTTTGACGTTTGTGGATTGCCTTGGCCAAAGCCACCATTACTGGCTGGTGCCCCCTaGCGCCTGGATCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DGKGNFDVCGLPWPKPPLLAGAP*RLDPKR
Trigger: CCTTTTGGGATCCAGGCGCCAGGGGGCACCAGCCAG...TAATGGTGGCTTTGGCCAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCTGGCTGGTGCCCCCTaGCGCCTGGATCCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGLAGAP*RLDPKR
Trigger: CCTTTTGGGATCCAGGCGCCAGGGGGCACCAGCCAG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCATTATGTGTCTCTGTaGCCGGGGGCTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPHYVSL*PGAPVW
Trigger: CCAGACAGGAGCCCCCGGCCACAGAGACACATAATG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDAPAGS*RPRPPV
Trigger: CACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGC...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGAPAGS*RPRPPV
Trigger: CACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGCAGGAGGCCCACTCTaGTACCACCTCCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSAGGPL*YHLLRR
Trigger: GCGGCGGAGGAGGTGGTACCAGAGTGGGCCTCCTGC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCTTCGGCTTGGCCTaGATGCGGGGTGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGFGLA*MRGDLR
Trigger: CCTCAAGTCACCCCGCATCCAGGCCAAGCCGAAGCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGGTTCTGGTTGGGTTTaGGCTTCGGCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPGSGWV*ASAWPG
Trigger: TCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAACGGAGAGGTTCTGGTTaGGTTTGGGCTTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQRRGSG*VWASAW
Trigger: CCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCG...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACA +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPASSGV*LEDSMT
Trigger: TGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGC...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGCTGCTTGGTGGGCTCTaGGCGCAGGACCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEELLGGL*AQDPVL
Trigger: GAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAG...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSMAAAW*ALGAGP
Trigger: GGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCAT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCAGCGAGGGGCGCAGCTaGTATGGCGGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGSEGRS*YGGCLV
Trigger: CACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCT...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGACCCCCTTGGGCAGGTTaGGCACCAGGTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRPPWAG*APGPRS
Trigger: GCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGG...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCCCCCTTGGGCAGGTTaGGCACCAGGTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGPPWAG*APGPRS
Trigger: GCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGGTAGCCCAGGATGCCTaGAGACTTAGCCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRVAQDA*RLSPGV
Trigger: GACTCCGGGGCTAAGTCTCCAGGCATCCTGGGCTAC...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGGTTTGTGGATTGCCTTaGCCAAAGCCACCATTAAAC +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRVCGLP*PKPPLN
Trigger: GTTTAATGGTGGCTTTGGCCAAGGCAATCCACAAAC...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTCACCTTGAGCTGGCCTaGGAGACCTCTCTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKSRGPYTHCPASSKALTHLELA*ETSLKV
Trigger: GACCTTTAGAGAGGTCTCCCAGGCCAGCTCAAGGTG...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTCTCTGGCACAGCAACTaGCTGTGCCCGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGLWHSN*LCPGLC
Trigger: ACAGAGGCCCGGGCACAGCCAGTTGCTGTGCCAGAG...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGAGCAGCTGGGTGGTTaGATGCCCAGGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYEQLGG*MPRALG
Trigger: GCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGCAGTGGGACCCCCGTaGGGTTCGTTACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQAVGPP*GSLLEA
Trigger: TGCTTCAAGTAACGAACCCCACGGGGGTCCCACTGC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGTTGCCGGTGGGTTCTaGTTGACATCGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGVAGGF*LTSVAG
Trigger: GCCAGCCACCGATGTCAATCAGAACCCACCGGCAAC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCGCCCAGACATCTCTTaGTCTGCTGACACCACTAGG +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQRPDIS*SADTTR
Trigger: CCTAGTGGTGTCAGCAGATCAAGAGATGTCTGGGCG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCAAGGGGCGTCTCTCTaGGGCCGGGCTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSQGASL*GRASLP
Trigger: GGGCAGCGAAGCCCGGCCTCAGAGAGACGCCCCTTG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGATATTTCTCCATCCGTaGCTGGCGGCGGGCGTAGAG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRIFLHP*LAAGVE
Trigger: CTCTACGCCCGCCGCCAGTCACGGATGGAGAAATAT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTG +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGLKTR*HISPSV
Trigger: CACGGATGGAGAAATATGTCATCGAGTCTTCAAGCC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCGLKTR*HISPSV
Trigger: CACGGATGGAGAAATATGTCATCGAGTCTTCAAGCC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCTCTGGCGTGTGGCTTaGAGACTCGATGACATATTT +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDALWRVA*RLDDIF
Trigger: AAATATGTCATCGAGTCTTCAAGCCACACGCCAGAG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGGTTTAGGGAACCAGTaGGGGCCTGCAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEGLGNQ*GPAARL
Trigger: GAGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGTCACCTACATACGTTTaGTCCTCAGCCAATTCCATA +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRSPTYV*SSANSI
Trigger: TATGGAATTGGCTGAGGATCAAACGTATGTAGGTGA...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAACCCGTCTCTGGTGTaGGGCCGCTTTGGGGCAATC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYNPSLV*GRFGAI
Trigger: GATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAGCGGTGTCCCCTGGGTaGCTCTGCAGGCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKAVSPG*LCRQSR
Trigger: ACGACTCTGCCTGCAGAGTCACCCAGGGGACACCGC...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTAAGTCTCCAGCTACCTaGCTTAACACCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAKSPAT*LNTLTV
Trigger: TACAGTGAGGGTGTTAAGTCAGGTAGCTGGAGACTT...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCCCCTCGATCTGTGTaGAATGAGCTCACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPPRSV*NELTKK
Trigger: CTTCTTAGTGAGCTCATTTCACACAGATCGAGGGGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAGCAGGAGCTGCAGAATaGAGGGCGGGCTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAAGAAE*RAGSSI
Trigger: AATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGC...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGAGCAGGGAGGGGACCTaGGGGAACTGGAGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSESREGT*GNWRAN
Trigger: ATTCGCTCTCCAGTTCCCTCAGGTCCCCTCCCTGCT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGAGCTCTCCTGACCCTTaGTGGCAGTTCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSSPDP*WQFFPP
Trigger: GGGAGGAAAGAACTGCCATCAAGGGTCAGGAGAGCT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGCAAAGGCAGCCAATTaGTTGGCTGACGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPAKAAN*LADEAR
Trigger: CCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR GCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCACCCCCTGGATGCTCCTaGCGGCCTTCAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSPPGCS*RPSSLG
Trigger: ACCAAGGCTTGAAGGCCGGCAGGAGCATCCAGGGGG...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAAAGCTGGGCTGCAATCTaGTGGCTCCGCGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEESWAAI*WLRALA
Trigger: AGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCT...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDANSFTL*RRLLKS
Trigger: GCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTT...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGGTTTTGGGACAGGTaGAGCCCATTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRRFWDR*SPLAVS
Trigger: GCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGGGCCGGTGAGGACTaGTGGGCCTCTCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGAGED*WASRFW
Trigger: CCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAAGAWG*PSAHRV
Trigger: CACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCTGTCAATTAGGAGTGTaGTGCATCTCACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCCQLGV*CISPPQ
Trigger: CTGAGGAGGTGAGATGCAGCACACTCCTAATTGACA...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGGPVTR*WLLLEV
Trigger: AACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCC...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGPVTR*WLLLEV
Trigger: AACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGGCTGGGCTTCGGGATaGCACTCGGAAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSGWASG*HSEGPG
Trigger: CCCGGGGCCTTCCGAGTGGCATCCCGAAGCCCAGCC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCCTCCTCTGACTCTCTaGACTTTTGCCTTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQPPLTL*TFAFLR
Trigger: GCGGAGGAAGGCAAAAGTGCAGAGAGTCAGAGGAGG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGAGGACCCAGCATGGTaGTGTTCTTCCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQEDPAW*CSSSAM
Trigger: CATCGCTGAGGAAGAACAGCACCATGCTGGGTCCTC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCATCCCTTGGCCTCCTaGAGCAGCTCATTCCAACCC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRHPLAS*SSSFQP
Trigger: GGGTTGGAATGAGCTGCTGCAGGAGGCCAAGGGATG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCATCTGTCCCTTCCCACTaGACTGCTATGCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDASVPSH*TAMHLP
Trigger: GGGCAGGTGCATAGCAGTGCAGTGGGAAGGGACAGA...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAAGGCAGCCAATTGCTTaGCTGACGAAGCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKARQPIA*LTKPGK
Trigger: TTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCT...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAAGGCAGCCAATTGCTTaGCTGACGAAGCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSRQPIA*LTKPGK
Trigger: TTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTGGAGCTGGGAGGGGTaGTCAGCTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYWSWEG*SAGLQS
Trigger: AGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATACCCCTCCATGCTGTaGCCAGGGACCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSYPSML*PGTPLS
Trigger: CGACAGAGGGGTCCCTGGCCACAGCATGGAGGGGTA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCCGGTGAGGACTGCTaGGCCTCTCGGTTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGAGEDC*ASRFWD
Trigger: GTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGATCTGCAGCTGGGCTGTaGACCTCAGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRSAAGL*TSAGGG
Trigger: CCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGA...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PECCREEALISNPAHVCTIDIGG*RIVAAV
Trigger: AACAGCAGCCACAATCCGCCAGCCACCGATGTCAAT...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCCATTAGATGGGAGTTaGGCCTCTGAGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESPLDGS*ASEEFC
Trigger: ACAGAATTCCTCAGAGGCCCAACTCCCATCTAATGG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCAGCACACAGGGTGCTaGGTTTGGAAGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEQHTGC*VWKQAL
Trigger: CAGGGCCTGCTTCCAAACCCAGCACCCTGTGTGCTG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATCCTCAGCCGGTGCCTaGGGTTGCCCATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSSSAGA*GCPSAH
Trigger: GTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCCTTGGTGGGCGTGGTaGCAGCTGCTCGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSPWWAW*QLLAQT
Trigger: TGTCTGGGCGAGCAGCTGCCACCACGCCCACCAAGG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCCTCACTGTAGACCTTaGTGGGCGTGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYPHCRP*WAWWQL
Trigger: CAGCTGCCACCACGCCCACCAAGGTCTACAGTGAGG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGGTCGTCTCTCTAGCATaGGGCTCCTCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRVVSLA*GSSPSG
Trigger: GCCAGATGGAGAGGAGCCCCATGCTAGAGAGACGAC...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCAAGCCAGAGGGGCTGTaGACAAGGTCTCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPKPEGL*TRSQCR
Trigger: CCTACACTGAGACCTTGTCCACAGCCCCTCTGGCTT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAACTTGGGGTCGGAGCTaGGATACAGGACAGAATATG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSTWGRS*DTGQNM
Trigger: CATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGT...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGECPSC*QEPPGP
Trigger: AGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCCAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPQIQQV*IRGHLG
Trigger: CCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTG...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGTTTGGGCTTCGGCTTaGCCTGGATGCGGGGTGACT +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYVWASA*PGCGVT
Trigger: AGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAAC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACA +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPASSGV*LEDSMT
Trigger: TGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAGGCGGGGTCCGGGCTaGGCTTCGGGATGCCACTCG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSRRGPG*ASGCHS
Trigger: CGAGTGGCATCCCGAAGCCCAGCCCGGACCCCGCCT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCTGCTTGGTGGGCTCTaGGCGCAGGACCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFLLGGL*AQDPVL
Trigger: GAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPMAAAW*ALGAGP
Trigger: GGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCAT...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGAGGGAGAGCCCCCTTaGGCAGGTTGGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFEGEPP*AGWAPG
Trigger: ACCTGGTGCCCAACCTGCCCAAGGGGGCTCTCCCTC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAAGAACCTGCCATGAATaGGCCCAGAAGGAACAGATG +
Preference number: 4 (lower is better)
Translates to: EGSKSRGPYTHCPASSKARTCHE*AQKEQM
Trigger: CATCTGTTCCTTCTGGGCCCATTCATGGCAGGTTCT...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQFLTRL*CEAALG
Trigger: CCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGTGAGGACCCAGCATaGTGCTGTTCTTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRGEDPA*CCSSSA
Trigger: CGCTGAGGAAGAACAGCACCATGCTGGGTCCTCACC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGATGCCCAGGGCTTTaGGCAGCTGCGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGCPGL*AAAVSP
Trigger: AGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAGGCCAGGGCTGGGGCTaGCTGTCATCATCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPGQGWG*LSSSAR
Trigger: CCGGGCAGATGATGACAGCCAGCCCCAGCCCTGGCC...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGCCCAGGGCCAGGGCTaGGGCTGGCTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAAQGQG*GWLSSS
Trigger: AGATGATGACAGCCAGCCCCAGCCCTGGCCCTGGGC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCAGTGGGACCCCCGTaGGGTTCGTTACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRAVGPP*GSLLEA
Trigger: TGCTTCAAGTAACGAACCCCACGGGGGTCCCACTGC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACGAACTTGACCGGCAGTaGGACCCCCGTGGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDELDRQ*DPRGVR
Trigger: ACGAACCCCACGGGGGTCCCACTGCCGGTCAAGTTC...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGGGCTCTCCTTCTCCTaGGGATCCCCTGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAGLSFS*GSPGTS
Trigger: GGACGTCCCAGGGGATCCCCAGGAGAAGGAGAGCCC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCACAGCCAATGGATACATaGCTAGGGGCCACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAQPMDT*LGATLP
Trigger: AGGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTG...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAGCAGGGCACATGTGTaGGGTGAATACATAAGTAGA +
Preference number: 4 (lower is better)
Translates to: WEREVGGPRPPALRSFHLSRAHV*GEYISR
Trigger: TCTACTTATGTATTCACCCCACACATGTGCCCTGCT...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCTGCTAGGTCCTCCCTaGAGCCAAGCTTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFLLGPP*SQASPW
Trigger: CCAGGGGGAAGCTTGGCTTCAGGGAGGACCTAGCAG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR TCA 90 bp GATGGGAAGGGGAATTTTGACGTTTGTGGATTGCCTTGGCCAAAGCCACCATTACGTGGCTCTCCAAGGTaGACTCGTTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGKGNFDVCGLPWPKPPLRGSPR*TRSPSA
Trigger: GGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACG...TAATGGTGGCTTTGGCCAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCAGGTGGAACTCAGGCTaGGCCCCGGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCRWNSG*APVHGL
Trigger: CAGGCCATGCACCGGGGCTCAGCCTGAGTTCCACCT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAAAGGCAAGGTTTTGGTTaGCATCTGCAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQRQGFG*HLQLGC
Trigger: ACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCT...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCCGGTGGGTTCTGATTaGCATCGGTGGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGPVGSD*HRWLAD
Trigger: ATCCGCCAGCCACCGATGTCAATCAGAACCCACCGG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGTTGCCGGTGGGTTCTaGTTGACATCGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGVAGGF*LTSVAG
Trigger: GCCAGCCACCGATGTCAATCAGAACCCACCGGCAAC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCTGGACATGAAATCTaGGGCTGGGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGAGHEI*GWGPGA
Trigger: AGCTCCAGGCCCCCAGCCTCAGATTTCATGTCCAGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGGGGCTTGGCCAGTGTaGAGTGGACCTCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: TTTTHPRLPNIMECISRLGAWPV*SGPHCR
Trigger: TCTACAGTGAGGTCCACTTCACACTGGCCAAGCCCC...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAACGTCCTGTTGACCACTaGTGGGGGCTTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEERPVDH*WGLGQC
Trigger: ACACTGGCCAAGCCCCCATCAGTGGTCAACAGGACG...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCGTCCTGTTGACCACTaGTGGGGGCTTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGRPVDH*WGLGQC
Trigger: ACACTGGCCAAGCCCCCATCAGTGGTCAACAGGACG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAGCCTGGCCGTCCTGTTaGCCACTGATGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPAWPSC*PLMGAW
Trigger: CCAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGC...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTG +
Preference number: 4 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSGLKTR*HISPSV
Trigger: CACGGATGGAGAAATATGTCATCGAGTCTTCAAGCC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGTACCCAAGCTCATCGGAGGCTCCTTGATAGGTaGGAGGACAAAGAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EIQADPNLTPCSRTQAHRRLLDR*EDKERG
Trigger: CCCTCGCTCTTTGTCCTCTCACCTATCAAGGAGCCT...CCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGAGGCAGCTCTTGGTaGGACCTTGGCAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSRGSSW*DLGRLL
Trigger: AAGGAGCCTGCCAAGGTCTCACCAAGAGCTGCCTCG...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATACCCTCAGGGGTCATCTaGGCCAATCCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIPSGVI*ANPVPC
Trigger: GCAGGGGACAGGATTGGCTCAGATGACCCCTGAGGG...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCACAGCAGGAGCATTCCTaGGGCCCAAGGAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSQQEHS*GPRSPL
Trigger: TAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGCTG...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGTCACTCATCATTAACTaGGTAAGAGCACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRSLIIN*VRAPSH
Trigger: ATGAGAAGGTGCTCTTACTCAGTTAATGATGAGTGA...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCACTGGGGCCAGCTGTGTaGGCCCTGGTCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPLGPAV*ALVSAP
Trigger: AGGAGCAGAGACCAGGGCTCACACAGCTGGCCCCAG...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGAAGGCTTCCACACCTaGGCCTCGATCCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFEGFHT*ASIPAF
Trigger: GAACGCCGGGATCGAGGCTCAGGTGTGGAAGCCTTC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCAGGAGCTGCAGAATaGAGGGCGGGCTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEAGAAE*RAGSSI
Trigger: AATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCAGCTGGGCTGCAATCTaGTGGCTCCGCGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFSWAAI*WLRALA
Trigger: AGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAGCTGGGCTGCAATCTaGTGGCTCCGCGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSWAAI*WLRALA
Trigger: AGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYNSFTL*RRLLKS
Trigger: GCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGGGGCCGGTGAGGACTaGTGGGCCTCTCGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCGAGED*WASRFW
Trigger: CCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGGTTTTGGTTGACATCTaGAGCTGGGCTGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLVLVDI*SWAVDL
Trigger: GAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAAC...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGTTTTGGTTGACATCTaGAGCTGGGCTGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPVLVDI*SWAVDL
Trigger: GAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAAC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGTTTTGGTTGACATCTaGAGCTGGGCTGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQVLVDI*SWAVDL
Trigger: GAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAAC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCAGGGGTCATCTGAGCCAATCCTGTCCCCTGCTAGAATCTCCTCTATGCATCCTGTGGGACAACAGTTaGCGGTGGGTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LRGHLSQSCPLLESPLCILWDNS*RWVLID
Trigger: GTCAATCAGAACCCACCGGCAACTGTTGTCCCACAG...GATGCATAGAGGAGATTCTAGCAGGGGACAGGATTGGCTCAGATGACCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGAGGCCGGGCTTCGCTaGCCCATCATCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFEAGLR*PIILLS
Trigger: GGAAAGGAGGATGATGGGGCAGCGAAGCCCGGCCTC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRSTPPE*PSCWQE
Trigger: TTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAGGCCTCGGCCCCCAGTaGGAAGGGCTCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKGLGPQ*EGLLLH
Trigger: GTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCC...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATACGAGGTGCTGGCTCCTaGTGGAAGTTGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIRGAGS*WKLEAS
Trigger: CGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCG...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCGAGGTGCTGGCTCCTaGTGGAAGTTGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSRGAGS*WKLEAS
Trigger: CGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCACACAGCAACTGGCTGTaGCCGGGCCTCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPHSNWL*PGLCPR
Trigger: CCGTGGACAGAGGCCCGGGCACAGCCAGTTGCTGTG...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCACTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDALPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGCCTCCACCACCCCTTaGCCCACTGGGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCASTTP*PTGEPR
Trigger: TCTGGGTTCCCCAGTGGGGCAAGGGGTGGTGGAGGC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCACACGTCTGTACCAGTaGAGAACCAGACACACGGCA +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPTRLYQ*RTRHTA
Trigger: TGCCGTGTGTCTGGTTCTGCACTGGTACAGACGTGT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCGCTGGCTCCGCGCCTTaGCTTCTTTCAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCAGSAP*LLSDPS
Trigger: AGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGC...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCACGGGAATTGGAGCTaGGAGGGGTGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFHGNWS*EGWSAG
Trigger: CCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCGCCTGTTGAAGAGCTaGACGCCACGGGAATTGGAG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSERLLKS*TPRELE
Trigger: CTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTACCCCTCCATGCTGTaGCCAGGGACCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFYPSML*PGTPLS
Trigger: CGACAGAGGGGTCCCTGGCCACAGCATGGAGGGGTA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTGGGCCTCTCGGTTTTaGGACAGGTGCAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYWASRF*DRCSPL
Trigger: CAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCATCTGCAGCTGGGCTGTaGACCTCAGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKASAAGL*TSAGGG
Trigger: CCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGA...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGGTGGCTGGCGGATTGTaGCTGCTGTTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQVAGGL*LLLEVG
Trigger: ACCAACTTCTAACAGCAGCCACAATCCGCCAGCCAC...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTACAGGGTGCTGGGTTTaGAAGCAGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGTGCWV*KQALCH
Trigger: ATGGCACAGGGCCTGCTTCCAAACCCAGCACCCTGT...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTCCTCAGCCGGTGCCTaGGGTTGCCCATCAGCACAC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFSSAGA*GCPSAH
Trigger: GTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTCGTCTCTCTAGCATaGGGCTCCTCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEVVSLA*GSSPSG
Trigger: GCCAGATGGAGAGGAGCCCCATGCTAGAGAGACGAC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTACGCCTACCTCCCCCTaGTCCCTCTGCCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GQQVEEITIQPRLQNRRATPTSP*SLCRRF
Trigger: GAAGCGGCGGCAGAGGGACCAGGGGGAGGTAGGCGT...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTACGCCTACCTCCCCCTaGTCCCTCTGCCGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSTPTSP*SLCRRF
Trigger: GAAGCGGCGGCAGAGGGACCAGGGGGAGGTAGGCGT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGCTTCGGCTTGGCCTaGATGCGGGGTGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGFGLA*MRGDLR
Trigger: CCTCAAGTCACCCCGCATCCAGGCCAAGCCGAAGCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGGAGCATTCCTGAGGCCCAAGGAGCCCTCTAAGGTCACTCTTTCATTCCAATTGTCTGGGAAGGGATaGAAAACAGCTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGAFLRPKEPSKVTLSFQLSGKG*KTAAPA
Trigger: GGCAGGAGCAGCTGTTTTCCATCCCTTCCCAGACAA...TTGGAATGAAAGAGTGACCTTAGAGGGCTCCTTGGGCCTCAGGAATGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCGGGCTAGTGGAGTGGTaGACCTCCAATCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECGLVEW*TSNPSS
Trigger: AGAAGAGGGATTGGAGGTCCACCACTCCACTAGCCC...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCAATTGGGGTGAGGTCTaGCTGAGACGAAAGATAAGT +
Preference number: 4 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESNWGEV*LRRKIS
Trigger: ACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCTTCCATCAGGGATCTaGAAGGCGCAGGGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDLPSGI*KAQGVG
Trigger: GCCTACCCCCTGCGCCTTCCAGATCCCTGATGGAAG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAGCTGCGGTGTCCCCTaGGTGACTCTGCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSCGVP*VTLQAE
Trigger: CTCTGCCTGCAGAGTCACCCAGGGGACACCGCAGCT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRHKASW*PHLTLN
Trigger: GTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGTCAGACAGCAGTGGTaGGCCGAGTCCGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCVRQQW*AESAAS
Trigger: GCTGGCTGCGGACTCGGCCCACCACTGCTGTCTGAC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCCAAAGAGAATGTGAGTaGGCCAAAGTCACACAGCAA +
Preference number: 4 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCQRECE*AKVTQQ
Trigger: TTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGAAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGGCGGGCTCTTCCATTaGTGGCCCTCAAGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYGGLFH*WPSRVE
Trigger: TTCTACCCTTGAGGGCCACCAATGGAAGAGCCCGCC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGGGCAGAGCTCAGCCTaGCCGCAGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAGQSSA*PQELQN
Trigger: ATTCTGCAGCTCCTGCGGCCAGGCTGAGCTCTGCCC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCTGGAGAGCGAATGCTaGCTAGAGGAATTTCTATTC +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPLESEC*LEEFLF
Trigger: GAATAGAAATTCCTCTAGCCAGCATTCGCTCTCCAG...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTGAGGCCCAGAGATTaGAAGAGGTTGTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQLRPRD*KRLSEV
Trigger: GACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCCTAACAGCCATGCCTaGGCACTGACTCTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQPNSHA*ALTLCV
Trigger: TACACACAGAGTCAGTGCCCAGGCATGGCTGTTAGG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCGTGGCTCTCCAAGGTaGACTCGTTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFRGSPR*TRSPSA
Trigger: GGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTGAAGGGAGCACTCTaGGGGACTCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFLKGAL*GTPGWA
Trigger: AGCCCAGCCAGGAGTCCCTCAGAGTGCTCCCTTCAA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCAAGGCAAGGTTTTGGTTaGCATCTGCAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDARQGFG*HLQLGC
Trigger: ACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCT...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCGCCCAGACATCTCTTaGTCTGCTGACACCACTAGG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSERPDIS*SADTTR
Trigger: CCTAGTGGTGTCAGCAGATCAAGAGATGTCTGGGCG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCATACAGGACAGAATATaGGGGAGGAGACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: VESEAKTANGYMARGHPPIQDRI*GRRPHP
Trigger: TGGGTGAGGTCTCCTCCCTCATATTCTGTCCTGTAT...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCAGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTG +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPGLKTR*HISPSV
Trigger: CACGGATGGAGAAATATGTCATCGAGTCTTCAAGCC...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAAGGCCTAGGACCTTCTaGACACACCCCGCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIRPRTF*THPACQ
Trigger: CTGGCAAGCGGGGTGTGTTCAGAAGGTCCTAGGCCT...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCAGCCCAGAACCTGCCATaGATGGGCCCAGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSAQNLP*MGPEGT
Trigger: TGTTCCTTCTGGGCCCATTCATGGCAGGTTCTGGGC...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCGTCCCCACTCCTGCTaGCCCCCTCATCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCRPHSC*PPHPLP
Trigger: TGGAAGAGGATGAGGGGGTCAGCAGGAGTGGGGACG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGCGGTGTCCCCTGGGTaGCTCTGCAGGCAGAGTCGT +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSAVSPG*LCRQSR
Trigger: ACGACTCTGCCTGCAGAGTCACCCAGGGGACACCGC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGACGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRRGKAL*SSGEET
Trigger: CGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCG...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGAAGTCACACAGCAAATaGGAAGGTGACATGGGACCG +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQKSHSK*EGDMGP
Trigger: CGGTCCCATGTCACCTTCTCATTTGCTGTGTGACTT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTGCGAAGCTTCCATCTaGATCCTGCCACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQCEASI*ILPLVS
Trigger: AGACACAAGTGGCAGGATTCAGATGGAAGCTTCGCA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCAGGAGCTGCAGAATaGAGGGCGGGCTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGAGAAE*RAGSSI
Trigger: AATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCAATTAGGAGTGTGCTaGATCTCACCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRQLGVC*ISPPQP
Trigger: CGGCTGAGGAGGTGAGATGCAGCACACTCCTAATTG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATTCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LCISSLPSSALSPEPAMNSTPPE*PSCWQE
Trigger: TTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGA...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYSTPPE*PSCWQE
Trigger: TTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCACATGGATTTGCGGCTaGCCCGGCGGGCCATCGACT +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCTWICG*PGGPST
Trigger: AGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGPVTR*WLLLEV
Trigger: AACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGGGATGGAAAACAGCTaGTCCTGCCTGGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPGMENS*SCLGLG
Trigger: ACCAAGTCCCAGGCAGGAGCAGCTGTTTTCCATCCC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCCTCTGCTGACCCCTCATCTCTGGGGCTGCCCAAAGAGGCCAGACCCTTTGGGCCTAATATCATGGAATaGATTTCAAGACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSADPSSLGLPKEARPFGPNIME*ISRLEE
Trigger: CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGG...CCCAAAGGGTCTGGCCTCTTTGGGCAGCCCCAGAGATGAGGGGTCAGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGGCCCTCCTCACCGCTaGTCTCCTCGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSGPPHR*SPRLPE
Trigger: CTCTGGAAGCCGAGGAGAGCAGCGGTGAGGAGGGCC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGCACTGCTATGCACCTaGCCCAGCTCCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAALLCT*PSSCHA
Trigger: AGCATGGCAGGAGCTGGGGCAGGTGCATAGCAGTGC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCCCACTGCACTGCTATaGACCTGCCCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCPTALL*TCPSSC
Trigger: GCAGGAGCTGGGGCAGGTGCATAGCAGTGCAGTGGG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGCCTCCACCACCCCTTaGCCCACTGGGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSASTTP*PTGEPR
Trigger: TCTGGGTTCCCCAGTGGGGCAAGGGGTGGTGGAGGC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCAAAAGGTTGCGATTTaGACAGGGTTCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQQKVAI*TGFWLP
Trigger: AGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACGAGCTCAATGCACCGTaGACACCAGAGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDELNAP*TPELLG
Trigger: CCCAAGGAGCTCTGGTGTGCACGGTGCATTGAGCTC...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTGGGAGCTTCTCTGTaGCAGTGGAACATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELGASL*QWNIPV
Trigger: GACTGGGATGTTCCACTGGCACAGAGAAGCTCCCAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGCCGGCCTTCAAGCCTTaGTTCTCAAAGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEPAFKP*FSKPPA
Trigger: TGCCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGG...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAATGGGCTGCAATCTGCTaGCTCCGCGCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKWAAIC*LRALAS
Trigger: AGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCA...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAACGCCTGTTGAAGAGCTaGACGCCACGGGAATTGGAG +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEERLLKS*TPRELE
Trigger: CTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCG...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTGTCCCCTCTGGCCGTaGCTCTCCAAGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSCPLWP*LSKVNS
Trigger: CGAGTTCACCTTGGAGAGCCACGGCCAGAGGGGACA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTGGCGAGGCAAGGTTTTaGTTGACATCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGGEARF*LTSAAG
Trigger: CCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCC...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRIDIGG*RIVAAV
Trigger: AACAGCAGCCACAATCCGCCAGCCACCGATGTCAAT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGAAAGTGGCAGGCTCTGTaGGACAACAGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRKWQAL*DNSCRW
Trigger: CCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTT...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ATGGTAGCTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCACTAGGGTGTTGGGCTaGATGTCAATGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MVALYLFSPQFSFEPRTCTRVLG*MSMSRE
Trigger: CTCCCTGCTCATTGACATCCAGCCCAACACCCTAGT...GCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAGCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCACTGTAGACCTTGGTaGGCGTGGTGGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFHCRPW*AWWQLL
Trigger: GAGCAGCTGCCACCACGCCCACCAAGGTCTACAGTG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATACCTCACTGTAGACCTTaGTGGGCGTGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIPHCRP*WAWWQL
Trigger: CAGCTGCCACCACGCCCACCAAGGTCTACAGTGAGG...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGAGTCGTCTCTCTAGCATaGGGCTCCTCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRVVSLA*GSSPSG
Trigger: GCCAGATGGAGAGGAGCCCCATGCTAGAGAGACGAC...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSDEKT*GRSWDT
Trigger: TGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGGTTCTGGTTGGGTTTaGGCTTCGGCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGGSGWV*ASAWPG
Trigger: TCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACA +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEASSGV*LEDSMT
Trigger: TGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGAGGGAGAGCCCCCTTaGGCAGGTTGGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSEGEPP*AGWAPG
Trigger: ACCTGGTGCCCAACCTGCCCAAGGGGGCTCTCCCTC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTCTGCCCTCCCGGGACTTCCTAATATCATaGAATGCATTTCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: DPLGPPGLMSLLLALPSRDFLIS*NAFQDW
Trigger: CCAGTCTTGAAATGCATTCCATGATATTAGGAAGTC...CCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGGCTAGTGGAGTGGTaGACCTCCAATCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGLVEW*TSNPSS
Trigger: AGAAGAGGGATTGGAGGTCCACCACTCCACTAGCCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGATCTGGAGCAGCTGGGTaGTTGGATGCCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRSGAAG*LDAQGF
Trigger: AAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGA...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCATCCCAGTCCTGGCTaGCCCTGTCGTCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSHPSPG*PCRRAG
Trigger: CCCAGCACGACGACAGGGCCAGCCAGGACTGGGATG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCAGCCCAGGCATCCCTTaGCCTCCTGCAGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFSPGIP*PPAAAH
Trigger: ATGAGCTGCTGCAGGAGGCCAAGGGATGCCTGGGCT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGCTGGGAAAGAGAAGTaGGTGGTCCTCGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCAGKEK*VVLGPQ
Trigger: CTGGGGGCCGAGGACCACCCACTTCTCTTTCCCAGC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGAGAGAAAACAAAGTTaGGGGCAGAGCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRERKQS*GQSSAW
Trigger: CCAGGCTGAGCTCTGCCCCCAACTTTGTTTTCTCTC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCATTGTTTCTGCCTTTaGTGGCCACAAGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQHCFCL*WPQGEC
Trigger: GCATTCCCCTTGTGGCCACCAAAGGCAGAAACAATG...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTAATCAGGGTGGGCTCTaGCATGACCCAACACCTGAC +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGNQGGL*HDPTPD
Trigger: GTCAGGTGTTGGGTCATGCCAGAGCCCACCCTGATT...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGCAGGACATTTTTCATaGGATACTAATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: REVGGPRPPALRSFHLNPAGHFS*DTNAGV
Trigger: CACTCCAGCATTAGTATCCCATGAAAAATGTCCTGC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCATTGAAGGGAGCACTCTaGGGGACTCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPLKGAL*GTPGWA
Trigger: AGCCCAGCCAGGAGTCCCTCAGAGTGCTCCCTTCAA...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCATGGCCTGGGAGGCTTaGAGGGAGCACTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCMAWEA*REHSEG
Trigger: TCCCTCAGAGTGCTCCCTTCAAGCCTCCCAGGCCAT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGAGGCAAGGTTTTGGTTaGCATCTGCAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSERQGFG*HLQLGC
Trigger: ACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCGTCCTGTTGACCACTaGTGGGGGCTTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCRPVDH*WGLGQC
Trigger: ACACTGGCCAAGCCCCCATCAGTGGTCAACAGGACG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTCGTCCCCACTCCTGCTaGCCCCCTCATCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GQQVEEITIQPRLQNRRARPHSC*PPHPLP
Trigger: TGGAAGAGGATGAGGGGGTCAGCAGGAGTGGGGACG...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGAAGGCTTCCACACCTaGGCCTCGATCCCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSEGFHT*ASIPAF
Trigger: GAACGCCGGGATCGAGGCTCAGGTGTGGAAGCCTTC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTGTGGGGTTCGTTACTTaGAGCAGAAGGAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGVGFVT*SRRKAS
Trigger: GGAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCAC...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTTGGAAGAGGTTGTCTaGGGTCACACACGAATCAGA +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQLEEVV*GHTRIR
Trigger: TCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCGCCATGCCTGGGCACTaGCTCTGTGTGTATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECAMPGH*LCVYVF
Trigger: AAAAACATACACACAGAGTCAGTGCCCAGGCATGGC...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAAACCCGTCTCTGGTGTaGGGCCGCTTTGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKANPSLV*GRFGAI
Trigger: TATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACGGTTTTGGGACAGGTaGAGCCCATTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKARFWDR*SPLAVS
Trigger: GCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCTGTGGGACAACAGTTaGCGGTGGGTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYLWDNS*RWVLID
Trigger: GTCAATCAGAACCCACCGGCAACTGTTGTCCCACAG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGTGTCAATTAGGAGTGTaGTGCATCTCACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVCQLGV*CISPPQ
Trigger: CTGAGGAGGTGAGATGCAGCACACTCCTAATTGACA...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCATTTCCACCATGGGGCTaGGGGACATTATGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAFPPWG*GTLCVS
Trigger: AGAGACACATAATGTCCCGCAGCCCCATGGTGGAAA...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGGTCCATATACACACTaGCCCGCCTCATCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEGPYTH*PASSKA
Trigger: TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATTTGAGCCCAGAACCTaGCATGAATGGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGFEPRT*HEWAQK
Trigger: CTTCTGGGCCCATTCATGGCAGGTTCTGGGCTCAAA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGTGAGCCCTGGTCTCTaGTCCTTACACAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAVSPGL*SLHSLL
Trigger: GAGGAGGCTGTGTAAGGAGCAGAGACCAGGGCTCAC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTAGGGCTTTGGGCAGCTaGGGTGTCCCCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: GQQVEEITIQPRLQNRRARALGS*GVPWVT
Trigger: AGTCACCCAGGGGACACCGCAGCTGCCCAAAGCCCT...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCACAAAGGCCAGAGGATaGCCCTCTACCGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFTKARG*PSTASG
Trigger: CCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTGGGCCCCGTTCCACTaGGCTGAGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSWAPFH*AEVASF
Trigger: AAAAGAAGCCACCTCAGCGCAGTGGAACGGGGCCCA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTCTGTCCCTTCCCACTaGACTGCTATGCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSVPSH*TAMHLP
Trigger: GGGCAGGTGCATAGCAGTGCAGTGGGAAGGGACAGA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAGAGCTCACAAAAACTaGAGGCTCAGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYRAHKN*RLSPAW
Trigger: CCATGCTGGGCTGAGCCTGCAGTTTTTGTGAGCTCT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTTTTGAGTCGGGGGTGTaGACAGTACGAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGFESGV*TVRKGC
Trigger: GCAGCCTTTTCGTACTGTGCACACCCCCGACTCAAA...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCACGGGAATTGGAGCTaGGAGGGGTGGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSHGNWS*EGWSAG
Trigger: CCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTACCCCTCCATGCTGTaGCCAGGGACCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSYPSML*PGTPLS
Trigger: CGACAGAGGGGTCCCTGGCCACAGCATGGAGGGGTA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTCTGCAGCTGGGCTGTaGACCTCAGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSSAAGL*TSAGGG
Trigger: CCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGTTGACATCTGCAGCTaGGCTGTGGACCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAVDICS*AVDLSW
Trigger: CCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAAC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGGCGAGGCAAGGTTTTaGTTGACATCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TTHPRLPNIMECISRLEEGEARF*LTSAAG
Trigger: CCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGGCGAGGCAAGGTTTTaGTTGACATCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGGEARF*LTSAAG
Trigger: CCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPAAVRS*CGERGT
Trigger: AGTGCCACGCTCACCACACCAACTTCTAACAGCAGC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEAAVRS*CGERGT
Trigger: AGTGCCACGCTCACCACACCAACTTCTAACAGCAGC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGACAACAGTTGCCGGTaGGTTCTGATTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRDNSCR*VLIDIG
Trigger: ACCGATGTCAATCAGAACCCACCGGCAACTGTTGTC...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTTGGATGCTAGAAAGTaGCAGGCTCTGTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRLDARK*QALWDN
Trigger: GTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGTCGTCTCTCTAGCATaGGGCTCCTCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFVVSLA*GSSPSG
Trigger: GCCAGATGGAGAGGAGCCCCATGCTAGAGAGACGAC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACA +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECSDEKT*GRSWDT
Trigger: TGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGA...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAGGTTCTGGTTGGGTTTaGGCTTCGGCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIGSGWV*ASAWPG
Trigger: TCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACC...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGCTCCTGCTAGTCCTCTaGGAAATGCAGGTAGAAATG +
Preference number: 4 (lower is better)
Translates to: GPYTHCPASSKALTSVCVLLLVL*EMQVEM
Trigger: CATTTCTACCTGCATTTCCCAGAGGACTAGCAGGAG...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCCTGGGCTAGTGGAGTaGTGGACCTCCAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFPGLVE*WTSNPS
Trigger: AGAGGGATTGGAGGTCCACCACTCCACTAGCCCAGG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAAGATAAGTCCTTCCTaGGCTAGTGGAGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRKISPS*ASGVVD
Trigger: GTCCACCACTCCACTAGCCCAGGAAGGACTTATCTT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTCTGGAGCAGCTGGGTaGTTGGATGCCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSGAAG*LDAQGF
Trigger: AAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTTCCACTGCGCTGAGGTaGCTTCTTTTAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGSTALR*LLLVRQ
Trigger: CTGCCTGACTAAAAGAAGCCACCTCAGCGCAGTGGA...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 72 bp GCCTGGGATCCCACTGTTTTCTTCCCAGGGTCAGAATaGTGTATACATGAGCCAGAGACACTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AWDPTVFFPGSE*CIHEPETLGAS
Trigger: AGAAGCTCCCAGTGTCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGAGCCAATTGCTTGGCTaGCGAAGCCAGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLSQLLG*RSQENP
Trigger: GGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCT...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGGGGCTTGGCCAGTGTaGAGTGGACCTCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCGAWPV*SGPHCR
Trigger: TCTACAGTGAGGTCCACTTCACACTGGCCAAGCCCC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACATACAGGACAGAATATaGGGGAGGAGACCTCACCCA +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYIQDRI*GRRPHP
Trigger: TGGGTGAGGTCTCCTCCCTCATATTCTGTCCTGTAT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAGGCTCCTTGATAGGTaGGAGGACAAAGAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSRLLDR*EDKERG
Trigger: CCCTCGCTCTTTGTCCTCTCACCTATCAAGGAGCCT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGCAGGAAGCATTTATTaGGGGCCAGAGCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: TTTTHPRLPNIMECISRLAGSIY*GPELHS
Trigger: AGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTGC...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTTCACAGAATTGGGGTaGGGTCTGGCTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYFTELG*GLAETK
Trigger: TTTCGTCTCAGCCAGACCTCACCCCAATTCTGTGAA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFTGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCCCCCTCGATCTGTGTaGAATGAGCTCACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYPPRSV*NELTKK
Trigger: CTTCTTAGTGAGCTCATTTCACACAGATCGAGGGGG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTTCACACACAGTAATTaGGCAGGCCCACTCCACTTC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYFTHSN*AGPLHF
Trigger: GAAGTGGAGTGGGCCTGCTCAATTACTGTGTGTGAA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCGAACTGTTCACTTTCTaGCAGAGAGCTCAATGCACC +
Preference number: 4 (lower is better)
Translates to: GRKEQKVAICTGFWLPECELFTF*QRAQCT
Trigger: GGTGCATTGAGCTCTCTGTCAGAAAGTGAACAGTTC...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GATGGGAAGGGGAATTTTGACGTTTGTGGATTGCCTTGGCCAAAGCCACCATTAGTTTTGGTTGACATCTaGAGCTGGGCTGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: DGKGNFDVCGLPWPKPPLVLVDI*SWAVDL
Trigger: GAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAAC...TAATGGTGGCTTTGGCCAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGCAATTAGGAGTGTGCTaGATCTCACCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLQLGVC*ISPPQP
Trigger: CGGCTGAGGAGGTGAGATGCAGCACACTCCTAATTG...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCATCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKASTPPE*PSCWQE
Trigger: TTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGA...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGCCTAACTTAACACCCTaGTCACGTACCCAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CISSLPSSALSPEPAMNGPNLTP*SRTQAH
Trigger: ATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGG...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGGATCCTCTATGCTACTaGCTCAGCCAGAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLDPLCY*LSQRPD
Trigger: ATCAGGCCTCTGGCTGAGGCAGTAGCATAGAGGATC...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAGTTCTTCCTCAGCGATaGAGGGAAGCAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPVLPQR*REAGSW
Trigger: CCAGGAGCCTGCTTCCCTGCATCGCTGAGGAAGAAC...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCCTCACTCAGCTCTGTaGCATTTCCTGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGPHSAL*HFLPHL
Trigger: CAGATGTGGCAGGAAATGGCACAGAGCTGAGTGAGG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACTACCGCATCAGGGCTaGCAGACAGTTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKALPHQG*QTVLSP
Trigger: TGGAGAGAGAACTGTCTGGCAGCCCTGATGCGGTAG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCAGAGCTCACAAAAACTaGAGGCTCAGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGRAHKN*RLSPAW
Trigger: CCATGCTGGGCTGAGCCTGCAGTTTTTGTGAGCTCT...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGAGCCAGTCCATTCCATaGTTCCTACCCGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSQSIP*FLPDQN
Trigger: ATTTTGATCGGGTAGGAAGCATGGAATGGACTGGCT...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTGGGCTGCAATCTGCTaGCTCCGCGCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSWAAIC*LRALAS
Trigger: AGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCACGCCTGTTGAAGAGCTaGACGCCACGGGAATTGGAG +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPRLLKS*TPRELE
Trigger: CTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCG...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTACAGGTGCAGCCCATTaGCTGTCAGCAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSTGAAH*LSAVLH
Trigger: ATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGTTGACATCTGCAGCTaGGCTGTGGACCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCVDICS*AVDLSW
Trigger: CCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAAC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGCGAGGCAAGGTTTTaGTTGACATCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGEARF*LTSAAG
Trigger: CCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGGTGGCTGGCGGATTGTaGCTGCTGTTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLVAGGL*LLLEVG
Trigger: ACCAACTTCTAACAGCAGCCACAATCCGCCAGCCAC...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAAATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEEIDIGG*RIVAAV
Trigger: AACAGCAGCCACAATCCGCCAGCCACCGATGTCAAT...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGACAACAGTTGCCGGTaGGTTCTGATTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPDNSCR*VLIDIG
Trigger: ACCGATGTCAATCAGAACCCACCGGCAACTGTTGTC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCAAGTGGCAGGCTCTGTaGGACAACAGTTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCKWQAL*DNSCRW
Trigger: CCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCACTAGGGTGTTGGGCTaGATGTCAATGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGTRVLG*MSMSRE
Trigger: CTCCCTGCTCATTGACATCCAGCCCAACACCCTAGT...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGACTTGGGGTCGGAGCTaGGATACAGGACAGAATATG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSETWGRS*DTGQNM
Trigger: CATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACA +
Preference number: 4 (lower is better)
Translates to: TTTTHPRLPNIMECISRLSDEKT*GRSWDT
Trigger: TGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGA...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAQIQQV*IRGHLG
Trigger: CCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCACTCCTCTATGCATCCTaGCCATGCTTTTCATATTTC +
Preference number: 4 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPLLYAS*PCFSYF
Trigger: GAAATATGAAAAGCATGGCCAGGATGCATAGAGGAG...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATTTCTGGGCACGATATaGACACTGGGACTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGFLGTI*TLGLRS
Trigger: AGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCCTGGGCTAGTGGAGTaGTGGACCTCCAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCPGLVE*WTSNPS
Trigger: AGAGGGATTGGAGGTCCACCACTCCACTAGCCCAGG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAAGGCAGACCCTCGGCTaGCTGACTCCACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKRQTLG*LTPQAL
Trigger: CAGTGCCTGTGGAGTCAGCCAGCCGAGGGTCTGCCT...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGATTTGCACAGGGTTCTaGCTCCCTGAGTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEICTGF*LPECCR
Trigger: TCTACAGCACTCAGGGAGCCAGAACCCTGTGCAAAT...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 72 bp GCCCATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTaGTCACTTACAAGGCCTTTCTTCAAAGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: AHFLSLSSQGTV*SLTRPFFKAPA
Trigger: GGCTGGTGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
3UTR CAA 72 bp TTTGGCCAAACTCTGAGGGAAGGAAAGAACAAAAGGTaGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FGQTLREGKNKR*RFAQGSGSLSA
Trigger: AGCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCCCTCAGAGTTTGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 72 bp ACAGAGAGCTCAATGCACCGTGCACACCAGAGCTCCTaGGGAATGCGGTGGGTGAAAATTCAAAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TESSMHRAHQSS*GMRWVKIQKVA
Trigger: TGCTACTTTTTGAATTTTCACCCACCGCATTCCCAAGGAGCTCTGGTGTGCACGGTGCATTGAGCTCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 72 bp CAGCCAAGACTACAAAACAGAAGGGCTCAAACGGGATaGAATGTTGAGGGCAGTGGTAAGCAGATCCCCATC +
Preference number: 4 (lower is better)
Translates to: QPRLQNRRAQTG*NVEGSGKQIPI
Trigger: GATGGGGATCTGCTTACCACTGCCCTCAACATTCAATCCCGTTTGAGCCCTTCTGTTTTGTAGTCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGTTTCTCCTCCACAGATaGCTCAGCCCAGCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TTTTHPRLPNIMECISRLFLLHR*LSPALY
Trigger: ATAAAGAGCTGGGCTGAGTCATCTGTGGAGGAGAAA...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCAGGCAAGGTTTTGGTTaGCATCTGCAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFRQGFG*HLQLGC
Trigger: ACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAACACACAACAGCTGAATaGGAGCAAGGGCTAGAACTC +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEEHTTAE*EQGLEL
Trigger: GAGTTCTAGCCCTTGCTCTCATTCAGCTGTTGTGTG...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATGGGAAGGGGAATTTTaGCGTTTGTGGATTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGWEGEF*RLWIAL
Trigger: CAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCACAGGCCCATGGAGGTaGGAATCCAGCAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCTGPWR*ESSNRK
Trigger: CTTCCTGTTGCTGGATTCTCACCTCCATGGGCCTGT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCGAGGCAAAGCTCTCTaGAGCAGCGGAGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSRGKAL*SSGEET
Trigger: CGTTTCCTCTCCGCTGCTTCAGAGAGCTTTGCCTCG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCAGAACCCAGCTCTCCTaGCCCTTGATGGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFRTQLS*PLMAVL
Trigger: AAGAACTGCCATCAAGGGTCAGGAGAGCTGGGTTCT...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGACCAAATGGTCTCTaGCCTCCTTCTGTAATCCTT +
Preference number: 4 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRRPNGL*PPSVIL
Trigger: AAGGATTACAGAAGGAGGTCAGAGACCATTTGGTCT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAGGGCTCAAACGGGATTaGATGTTGAGGGCAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKGLKRD*MLRAVV
Trigger: TACCACTGCCCTCAACATTCAATCCCGTTTGAGCCC...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSNSFTL*RRLLKS
Trigger: GCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCGGTTTTGGGACAGGTaGAGCCCATTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSRFWDR*SPLAVS
Trigger: GCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGTGTCAATTAGGAGTGTaGTGCATCTCACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSECQLGV*CISPPQ
Trigger: CTGAGGAGGTGAGATGCAGCACACTCCTAATTGACA...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATTTCCACCATGGGGCTaGGGGACATTATGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSFPPWG*GTLCVS
Trigger: AGAGACACATAATGTCCCGCAGCCCCATGGTGGAAA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAGCTAGAACTCAAGCTTaGGTCCCTAACCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIARTQA*VPNPSP
Trigger: TGGGGATGGGTTAGGGACGCAAGCTTGAGTTCTAGC...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCAGAAATGGATCCTCTATaGTACTGCCTCAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSEMDPL*YCLSQR
Trigger: CCTCTGGCTGAGGCAGTAGCATAGAGGATCCATTTC...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGACTCTCTGCACTTTTaGCTTCCTCCGCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGDSLHF*LPPLIH
Trigger: GTGAATCAGCGGAGGAAGGCAAAAGTGCAGAGAGTC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDLCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCATCCCTTGGCCTCCTaGAGCAGCTCATTCCAACCC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSHPLAS*SSSFQP
Trigger: GGGTTGGAATGAGCTGCTGCAGGAGGCCAAGGGATG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGTGGCTGGCGGATTGTaGCTGCTGTTAGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSVAGGL*LLLEVG
Trigger: ACCAACTTCTAACAGCAGCCACAATCCGCCAGCCAC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CTCTGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATCCATTAGATGGGAGTTaGGCCTCTGAGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: LCISSLPSSALSPEPAMNPLDGS*ASEEFC
Trigger: ACAGAATTCCTCAGAGGCCCAACTCCCATCTAATGG...ATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCCATTAGATGGGAGTTaGGCCTCTGAGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYPLDGS*ASEEFC
Trigger: ACAGAATTCCTCAGAGGCCCAACTCCCATCTAATGG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCCATTAGATGGGAGTTaGGCCTCTGAGGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEPLDGS*ASEEFC
Trigger: ACAGAATTCCTCAGAGGCCCAACTCCCATCTAATGG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTACAGGGTGCTGGGTTTaGAAGCAGGCCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSTGCWV*KQALCH
Trigger: ATGGCACAGGGCCTGCTTCCAAACCCAGCACCCTGT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTCCTCCTTTCCACCATaGGGCTGCGGGACATTATGT +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSSFPP*GCGTLC
Trigger: ACATAATGTCCCGCAGCCCCATGGTGGAAAGGAGGA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCAAGCCAGAGGGGCTGTaGACAAGGTCTCAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCKPEGL*TRSQCR
Trigger: CCTACACTGAGACCTTGTCCACAGCCCCTCTGGCTT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCAACTTGGGGTCGGAGCTaGGATACAGGACAGAATATG +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSTWGRS*DTGQNM
Trigger: CATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGT...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGACTGGACAGTCTGAACTaGGATGGAGAAAGTAGCATG +
Preference number: 4 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGLDSLN*DGESSM
Trigger: CATGCTACTTTCTCCATCCCAGTTCAGACTGTCCAG...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCFLTRL*CEAALG
Trigger: CCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAA...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGCTGATTCACAGAATTaGGGTGAGGTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGADSQN*GEVWLR
Trigger: TCTCAGCCAGACCTCACCCCAATTCTGTGAATCAGC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCAGCTGTGTGAGCCCTaGTCTCTGCTCCTTACACAG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCQLCEP*SLLLTQ
Trigger: CTGTGTAAGGAGCAGAGACCAGGGCTCACACAGCTG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCCCCTTGTTCCTCTCTaGAGCAGCTGGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSPLVPL*SSWVVG
Trigger: TCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAACCCCCAGCAAGACGCTaGCATCAGACTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKPPARR*HQTLHP
Trigger: GGGATGCAGAGTCTGATGCCAGCGTCTTGCTGGGGG...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTGCACCCCTGTTCCCATaGAGACAAGCCCAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQQVEEITIQPRLQNRRAAPLFP*RQAQSS
Trigger: TGAGCTCTGGGCTTGTCTCCATGGGAACAGGGGTGC...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAACTCTGGCGTGTGGCTTaGAGACTCGATGACATATTT +
Preference number: 4 (lower is better)
Translates to: STFLGTIWTLGLRSDTEELWRVA*RLDDIF
Trigger: AAATATGTCATCGAGTCTTCAAGCCACACGCCAGAG...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCTCTGGCGTGTGGCTTaGAGACTCGATGACATATTT +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGLWRVA*RLDDIF
Trigger: AAATATGTCATCGAGTCTTCAAGCCACACGCCAGAG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCAATGTCCTGGACAGTCTaGACTGGGATGGAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSMSWTV*TGMEKV
Trigger: TACTTTCTCCATCCCAGTTCAGACTGTCCAGGACAT...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATATATGGACACTGGGACTaGGGTCTGACACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIYGHWD*GLTLKK
Trigger: CTTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATA...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGCTGAAGCTAATATTCTaGACCTCTAGAAGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: QEAFIEGQSCILQEARGRLKLIF*TSRRLY
Trigger: GTAGAGCCTTCTAGAGGTTCAGAATATTAGCTTCAG...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCATTAGGATCCAGACAGTaGAAACAATGGCAAATGTGG +
Preference number: 4 (lower is better)
Translates to: LRPRDWKRLSEVTHESDALGSRQ*KQWQMW
Trigger: CCACATTTGCCATTGTTTTCACTGTCTGGATCCTAA...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCTGTGGGACAACAGTTaGCGGTGGGTTCTGATTGAC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCLWDNS*RWVLID
Trigger: GTCAATCAGAACCCACCGGCAACTGTTGTCCCACAG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTATTTCCTGCCACATCTaGTCTCCATCTGGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSISCHI*SPSGPQ
Trigger: TTGAGGGCCAGATGGAGAGCAGATGTGGCAGGAAAT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACTCTGTGCCATTTCCTaGCACATCTGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKALCAIS*HICSPS
Trigger: AGATGGAGAGCAGATGTGGCAGGAAATGGCACAGAG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAGCTGGCATCAGACTCTaGATCCCTACAGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAAGIRL*IPTAHK
Trigger: TTTGTGAGCTGTAGGGATGCAGAGTCTGATGCCAGC...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAACATCCCTTGGCCTCCTaGAGCAGCTCATTCCAACCC +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKHPLAS*SSSFQP
Trigger: GGGTTGGAATGAGCTGCTGCAGGAGGCCAAGGGATG...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCTAAAGCATTGTTTCTaGCTTTGGTGGCCACAAGGG +
Preference number: 4 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDLKHCF*LWWPQG
Trigger: CCCTTGTGGCCACCAAAGGCAGAAACAATGCTTTAG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGACAACAGTTGCCGGTaGGTTCTGATTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFDNSCR*VLIDIG
Trigger: ACCGATGTCAATCAGAACCCACCGGCAACTGTTGTC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCATTGGATGCTAGAAAGTaGCAGGCTCTGTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKALDARK*QALWDN
Trigger: GTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAA...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACA +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFSDEKT*GRSWDT
Trigger: TGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAACGGAGAGGTTCTGGTTaGGTTTGGGCTTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKRRGSG*VWASAW
Trigger: CCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCG...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GGCCAACAAGTGGAAGAAATAACAATTCAGCCAAGACTACAAAACAGAAGGGCTGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACA +
Preference number: 4 (lower is better)
Translates to: GQQVEEITIQPRLQNRRAASSGV*LEDSMT
Trigger: TGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGC...AGCCCTTCTGTTTTGTAGTCTTGGCTGAATTGTTATTTCTTCCACTTGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAAAGATAAGTCCTTCCTaGGCTAGTGGAGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAKISPS*ASGVVD
Trigger: GTCCACCACTCCACTAGCCCAGGAAGGACTTATCTT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAATTGGGGTGAGGTCTaGCTGAGACGAAAGATAAGT +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYNWGEV*LRRKIS
Trigger: ACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCACAAAGCCAGCTGGTaGCCGCATCTGACCTTGAAC +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSHKASW*PHLTLN
Trigger: GTTCAAGGTCAGATGCGGCCACCAGCTGGCTTTGTG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACCACAAAGCCTGGTTTaGTCGGGGGCTGTATCATAT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKAPQSLV*SGAVSY
Trigger: ATATGATACAGCCCCCGACCAAACCAGGCTTTGTGG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAAGTCTCCAGCTACCTaGCTTAACACCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSKSPAT*LNTLTV
Trigger: TACAGTGAGGGTGTTAAGTCAGGTAGCTGGAGACTT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCCCCCTCGATCTGTGTaGAATGAGCTCACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCPPRSV*NELTKK
Trigger: CTTCTTAGTGAGCTCATTTCACACAGATCGAGGGGG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTGTCAATTAGGAGTGTaGTGCATCTCACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSCQLGV*CISPPQ
Trigger: CTGAGGAGGTGAGATGCAGCACACTCCTAATTGACA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATAATTGAGGGCCAGAGCTaGATTCTACAAGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIIEGQS*ILQEAR
Trigger: TCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAAT...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGACTCTCTGCACTTTTaGCTTCCTCCGCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCDSLHF*LPPLIH
Trigger: GTGAATCAGCGGAGGAAGGCAAAAGTGCAGAGAGTC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR GCA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTTCCATCTGAATCCTaGCACTTGTGTCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELPSES*HLCLYS
Trigger: AGAATACAGACACAAGTGGCAGGATTCAGATGGAAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAGAGCTCACAAAAACTaGAGGCTCAGCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSRAHKN*RLSPAW
Trigger: CCATGCTGGGCTGAGCCTGCAGTTTTTGTGAGCTCT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR GCA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACACAGTACGAAAAGGCTaGAGGAAATCAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYTVRKG*RKSELF
Trigger: GAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAACAGGTGCAGCCCATTaGCTGTCAGCAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKTGAAH*LSAVLH
Trigger: ATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGT...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ACCAGTCCACCTTGCCATTTAATCCAATCCAAATTCACTAGCAGTCATCCACCAGACAACAGTTGCCGGTaGGTTCTGATTGACATCGGT +
Preference number: 4 (lower is better)
Translates to: TSPPCHLIQSKFTSSHPPDNSCR*VLIDIG
Trigger: ACCGATGTCAATCAGAACCCACCGGCAACTGTTGTC...TGGTGGATGACTGCTAGTGAATTTGGATTGGATTAAATGGCAAGGTGGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCTTGGATGCTAGAAAGTaGCAGGCTCTGTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCLDARK*QALWDN
Trigger: GTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAA...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCAAAGAGAATGTGAGTaGGCCAAAGTCACACAGCAA +
Preference number: 4 (lower is better)
Translates to: QILVESEAKTANGYMARGQRECE*AKVTQQ
Trigger: TTGCTGTGTGACTTTGGCCCACTCACATTCTCTTTG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGAACACAGTCAAACCTaGACTGTCGGAGACCAAATG +
Preference number: 4 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFEHSQT*TVGDQM
Trigger: CATTTGGTCTCCGACAGTCCAGGTTTGACTGTGTTC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
3UTR CAA 72 bp ACTGCGCTGAGGTGGCTTCTTTTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAAACAGCCAATGGATAC +
Preference number: 4 (lower is better)
Translates to: TALRWLLLVRQI*VESEAKTANGY
Trigger: GTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAAAAGAAGCCACCTCAGCGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTTTTTTGGCCAAACTCTaGGGGAAGGAAAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGFLAKL*GKERTK
Trigger: TTTTGTTCTTTCCTTCCCTCAGAGTTTGGCCAAAAA...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAACAATTAGGAGTGTGCTaGATCTCACCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKQLGVC*ISPPQP
Trigger: CGGCTGAGGAGGTGAGATGCAGCACACTCCTAATTG...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp GGGATCCCACTGTTTTCTTCCCAGGGTCAGAATTGTGTATACATGAGCCAGAGAGAAAGAACAAAAGGTTaGGATTTGCACAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GIPLFSSQGQNCVYMSQRERTKG*DLHRVL
Trigger: CAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTC...TCTCTGGCTCATGTATACACAATTCTGACCCTGGGAAGAAAACAGTGGGATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACCTTATAATTCTCTTATaGCTGCAGATAAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHLIILL*LQIRCP
Trigger: AGGACATCTTATCTGCAGCCATAAGAGAATTATAAG...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
3UTR CAA 72 bp TGTACTGATGGGAAGGGGAATTTTGACGTTTGTGGATaGCCTTGGCCAAAGCCACCATTAAACAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: CTDGKGNFDVCG*PWPKPPLNRWE
Trigger: TTCCCATCTGTTTAATGGTGGCTTTGGCCAAGGCAATCCACAAACGTCAAAATTCCCCTTCCCATCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR TCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCTCTGGCGTGTGGCTTaGAGACTCGATGACATATTT +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSLWRVA*RLDDIF
Trigger: AAATATGTCATCGAGTCTTCAAGCCACACGCCAGAG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR TCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAATTCACAGAATTGGGGTaGGGTCTGGCTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKFTELG*GLAETK
Trigger: TTTCGTCTCAGCCAGACCTCACCCCAATTCTGTGAA...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAATGCGAAGCTTCCATCTaGATCCTGCCACTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKCEASI*ILPLVS
Trigger: AGACACAAGTGGCAGGATTCAGATGGAAGCTTCGCA...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAATCCCAGTCATCAAGCTaGAAGTTAAGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKSQSSS*KLRLSL
Trigger: CAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGA...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR TCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCATGTTATACAACAGCCTaGGCAGGACATTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKACYTTA*AGHFSW
Trigger: CCATGAAAAATGTCCTGCTCAGGCTGTTGTATAACA...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR GCA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACTTCCATCTGAATCCTaGCACTTGTGTCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKALPSES*HLCLYS
Trigger: AGAATACAGACACAAGTGGCAGGATTCAGATGGAAG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCAGGAATCACAGGAGTaGTGTGACCTAAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCQESQE*CDLRCK
Trigger: TTTGCATCTTAGGTCACACCACTCCTGTGATTCCTG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS-3UTR GCA 90 bp CCAAGTCCTGGGCCTAAGGGAAATCACTGCCTTATAATTCTCTTATGGCTGCAGCCTAAGGGAAATCACTaGCTTATAATTCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: PSPGPKGNHCLIILLWLQPKGNH*LIILLW
Trigger: CCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGG...CTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR GCA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCTTCCATCTGAATCCTaGCACTTGTGTCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: IFLKILRSPLSLPTALLCLPSES*HLCLYS
Trigger: AGAATACAGACACAAGTGGCAGGATTCAGATGGAAG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGGCAAATGTGGGAAATaGCCAAATTTAGATAATGGG +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSGKCGK*PNLDNG
Trigger: CCCATTATCTAAATTTGGCCATTTCCCACATTTGCC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CCA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAAACAATGGCAAATGTaGGAAATGGCCAAATTTAGA +
Preference number: 4 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSKQWQM*EMAKFR
Trigger: TCTAAATTTGGCCATTTCCCACATTTGCCATTGTTT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CCA 90 bp GACCTGGCTCCCACGGGCCCGGGCTCACCCAGCCGTCTAGGCTGCTaGGGGGCCGGGACGCGCCCGGCGTCCAGGGTGGGGAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: DLAPTGPGSPSRLGC*GAGTRPASRVGRWA
Trigger: TGCCCACCTCCCCACCCTGGACGCCGGGCGCGTCCCGGCCCCCCAGCAGCCTAGACGGCTGGGTGAGCCCGGGCCCGTGGGAGCCAGGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 90 bp GACTGGTGCAGGACGAAGGACCGGCGGGCAACGGGCTCCGCGGGATaGGCGCGAAGGCTGCCCCCGGCACAGCAGCCGAGCCGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: DWCRTKDRRATGSAG*ARRLPPAQQPSRGG
Trigger: CCCGCCCCGGCTCGGCTGCTGTGCCGGGGGCAGCCTTCGCGCCCATCCCGCGGAGCCCGTTGCCCGCCGGTCCTTCGTCCTGCACCAGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS GCA 90 bp AGAGGAAGGGCCTGGGAGGCGCGGGCAGCGGGCTCCGGGGACTGGTaGAGGACGAAGGACCGGCGGGCAACGGGCTCCGCGGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: RGRAWEARAAGSGDW*RTKDRRATGSAGWA
Trigger: CGCCCATCCCGCGGAGCCCGTTGCCCGCCGGTCCTTCGTCCTGCACCAGTCCCCGGAGCCCGCTGCCCGCGCCTCCCAGGCCCTTCCTCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 90 bp GGTAGAGGAAGGGCCTGGGAGGCGCGGGCAGCGGGCTCCGGGGACTaGTGCAGGACGAAGGACCGGCGGGCAACGGGCTCCGCGGGATGG +
Preference number: 5 (lower is better)
Translates to: GRGRAWEARAAGSGD*CRTKDRRATGSAGW
Trigger: CCATCCCGCGGAGCCCGTTGCCCGCCGGTCCTTCGTCCTGCACCAGTCCCCGGAGCCCGCTGCCCGCGCCTCCCAGGCCCTTCCTCTACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 90 bp GGGACACGTCGGAGTCCGTGGGCGAGCGGCGGTAGAGGAAGGGCCTaGGAGGCGCGGGCAGCGGGCTCCGGGGACTGGTGCAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: GTRRSPWASGGRGRA*EARAAGSGDWCRTK
Trigger: CTTCGTCCTGCACCAGTCCCCGGAGCCCGCTGCCCGCGCCTCCCAGGCCCTTCCTCTACCGCCGCTCGCCCACGGACTCCGACGTGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS GCA 90 bp TCCTCCGCCGCCGCGGGGCTGGCCCTGTCACGAGGTGCTGGCTCCTaGTGGAAGTTGGAGGCCTCGGCCCCCAGTGCGAAGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSAAAGLALSRGAGS*WKLEASAPSAKGSS
Trigger: GGAGGAGCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGAGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TCCGCCGCCGCGGGGCTGGCCCTGTCACGAGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCCCCCAGTGCGAAGGGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAAAGLALSRGAGSC*KLEASAPSAKGSSS
Trigger: GGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TACCACCTCCTCCGCCGCCGCGGGGCTGGCCCTGTCACGAGGTGCTaGCTCCTGCTGGAAGTTGGAGGCCTCGGCCCCCAGTGCGAAGGG +
Preference number: 5 (lower is better)
Translates to: YHLLRRRGAGPVTRC*LLLEVGGLGPQCEG
Trigger: CCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGAGGAGGTGGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp TGGTACCACCTCCTCCGCCGCCGCGGGGCTGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTTGGAGGCCTCGGCCCCCAGTGCGAA +
Preference number: 5 (lower is better)
Translates to: WYHLLRRRGAGPVTR*WLLLEVGGLGPQCE
Trigger: TTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGAGGAGGTGGTACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp CAATCTGTAGCCGGACACCACACCCTCTGGCACAGCAACTGGCTGTaGCCGGGCCTCTGTCCACGGCTGCCCGGCTGCCCGCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QSVAGHHTLWHSNWL*PGLCPRLPGCPPPA
Trigger: GGCAGGCGGCGGGCAGCCGGGCAGCCGTGGACAGAGGCCCGGGCACAGCCAGTTGCTGTGCCAGAGGGTGTGGTGTCCGGCTACAGATTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CCA 90 bp CCGCGGGGCTGGCCCTGTCACGAGGTGCTGGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTGCGAAGGGCTCCTCCTCCACGCCTA +
Preference number: 5 (lower is better)
Translates to: PRGWPCHEVLAPAGS*RPRPPVRRAPPPRL
Trigger: TAGGCGTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GAGACACGGGGGAGATGTCACCGCCGTAAGGAGGGCTCACGGCAGTaGGCTGCAGGCTGTCCTGGCCGGGGGAGGTGTAGAGGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: ETRGRCHRRKEGSRQ*AAGCPGRGRCRGPV
Trigger: CACCGGGCCTCTACACCTCCCCCGGCCAGGACAGCCTGCAGCCCACTGCCGTGAGCCCTCCTTACGGCGGTGACATCTCCCCCGTGTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GAGGGAGAGCCCCCTTGGGCAGGTTGGGCACCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAGCTCTTGGTGAGACCTTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EGEPPWAGWAPGPRS*AWRARQLLVRPWQA
Trigger: AGCCTGCCAAGGTCTCACCAAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGGCTCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GGCGCAGGGGGTAGGCCTCCCTTCGCTGGGTGCAAGGGGCGGAGGTaGGAGGTGAGGACCCAGCATGGTGCTGTTCTTCCTCAGCGATGC +
Preference number: 5 (lower is better)
Translates to: GAGGRPPFAGCKGRR*EVRTQHGAVLPQRC
Trigger: GCATCGCTGAGGAAGAACAGCACCATGCTGGGTCCTCACCTCCCACCTCCGCCCCTTGCACCCAGCGAAGGGAGGCCTACCCCCTGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS GCA 90 bp GCAGCTGGGCTGTGGACCTCAGCTGGAGGTGGGGCCGGTGAGGACTaGTGGGCCTCTCGGTTTTGGGACAGGTGCAGCCCATTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AAGLWTSAGGGAGED*WASRFWDRCSPLAV
Trigger: GACAGCCAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCAGCTGAGGTCCACAGCCCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GCTGGGCTGTGGACCTCAGCTGGAGGTGGGGCCGGTGAGGACTGCTaGGCCTCTCGGTTTTGGGACAGGTGCAGCCCATTGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: AGLWTSAGGGAGEDC*ASRFWDRCSPLAVS
Trigger: GCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCAGCTGAGGTCCACAGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GGCTGCCCCGGCGGGCCATCGACTCCTCCAGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCTTCAGATGAGAAGACTTGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: GCPGGPSTPPECPSC*QEPPGPSDEKTWGR
Trigger: CCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GTCGTCGTGCTGGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGTaGTTGGATGCCCAGGGCTTTGGGCAGCTGCGGTGTCCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: VVVLGRPLFLSGAAG*LDAQGFGQLRCPLG
Trigger: ACCCAGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTGGTATGGCGGCTGCTaGGTGGGCTCTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWWYGGC*VGSGRR
Trigger: CCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp TGCGGCTGCCCCGGCGGGCCATCGACTCCTCCAGAATGCCCGTCTTaGTGGCAGGAACCGCCTGGCCCTTCAGATGAGAAGACTTGGGGT +
Preference number: 5 (lower is better)
Translates to: CGCPGGPSTPPECPS*WQEPPGPSDEKTWG
Trigger: ACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGGGCAGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp TGCCCGGCCTTCACTACATCCCAGTCCTGGCTGGCCCTGTCGTCGTaGTGGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: CPAFTTSQSWLALSS*WDAPCSSLEQLGGW
Trigger: CCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAAGGCCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 90 bp AAAGAGCGAGGGGCGCAGCTGGTATGGCGGCTGCTTGGTGGGCTCTaGGCGCAGGACCCCGTTCTCAGGCAGGTAGCCATGGTAGAGGGA +
Preference number: 5 (lower is better)
Translates to: KERGAQLVWRLLGGL*AQDPVLRQVAMVEG
Trigger: TCCCTCTACCATGGCTACCTGCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp AGAGGACAAAGAGCGAGGGGCGCAGCTGGTATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCCCGTTCTCAGGCAGGTAGCCATGGT +
Preference number: 5 (lower is better)
Translates to: RGQRARGAAGMAAAW*ALGAGPRSQAGSHG
Trigger: ACCATGGCTACCTGCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCTTTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TCGTGCTGGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGTGGTTaGATGCCCAGGGCTTTGGGCAGCTGCGGTGTCCCCTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: SCWDAPCSSLEQLGG*MPRALGSCGVPWVT
Trigger: AGTCACCCAGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGGCCTGGCCGTCCTGTaGACCACTGATGGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWGLAVL*TTDGGL
Trigger: CAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGCC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGGCTCCTGCTGGAAGTaGGAGGCCTCGGCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSGSCWK*EASAPS
Trigger: ACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAGGCCTGGGGGCCTGCTaGGCTCGGGGAGACCACGCC +
Preference number: 5 (lower is better)
Translates to: EGSKSRGPYTHCPASSKAGLGAC*ARGDHA
Trigger: GGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCC...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 90 bp GCACTGGGCGAGGCAAGGTTTTGGTTGACATCTGCAGCTGGGCTGTaGACCTCAGCTGGAGGTGGGGCCGGTGAGGACTGCTGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ALGEARFWLTSAAGL*TSAGGGAGEDCWAS
Trigger: AGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CCGGCCTTCACTACATCCCAGTCCTGGCTGGCCCTGTCGTCGTGCTaGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGTGGTTGGATG +
Preference number: 5 (lower is better)
Translates to: PAFTTSQSWLALSSC*DAPCSSLEQLGGWM
Trigger: CATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 90 bp GGGCTGGCTGTCATCATCTGCCCGGCCTTCACTACATCCCAGTCCTaGCTGGCCCTGTCGTCGTGCTGGGACGCCCCTTGTTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GLAVIICPAFTTSQS*LALSSCWDAPCSSL
Trigger: CAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAAGGCCGGGCAGATGATGACAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCGGCTCCTGCTGGAAGTaGGAGGCCTCGGCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFGSCWK*EASAPS
Trigger: ACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCC...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTGGATGCGGGGTGACTaGAGGCAGGAGGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWWMRGD*RQEAHS
Trigger: AGAGTGGGCCTCCTGCCTCAAGTCACCCCGCATCCA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 90 bp CCCCGTGGGGTTCGTTACTTGAAGCAGAAGGAAGGCTTCCACACCTaGGCCTCGATCCCGGCGTTCCGGGTAGAGAAGGAGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRGVRYLKQKEGFHT*ASIPAFRVEKEGLG
Trigger: CCCCAGGCCCTCCTTCTCTACCCGGAACGCCGGGATCGAGGCTCAGGTGTGGAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp TGTCCCCTCTGGCCGTGGCTCTCCAAGGTGAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGCTGGACGCCACGGGAATTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CPLWPWLSKVNSFTL*RRLLKSWTPRELEL
Trigger: CAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACGGCCAGAGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp ACATGGATTTGCGGCTGCCCCGGCGGGCCATCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAACCGCCTGGCCCTTCAGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: TWICGCPGGPSTPPE*PSCWQEPPGPSDEK
Trigger: CTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TCCAAGGTGAACTCGTTCACCCTCTGCCGGCGCCTGTTGAAGAGCTaGACGCCACGGGAATTGGAGCTGGGAGGGGTGGTCAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SKVNSFTLCRRLLKS*TPRELELGGVVSWA
Trigger: AGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTTCACCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TCAGCTGGAGGTGGGGCCGGTGAGGACTGCTGGGCCTCTCGGTTTTaGGACAGGTGCAGCCCATTGGCTGTCAGCAGTGCTGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: SAGGGAGEDCWASRF*DRCSPLAVSSAAFS
Trigger: GGAGAATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCAGCAGTCCTCACCGGCCCCACCTCCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GCTGCCATTCCACCCGCGGGGACAGATATTGTAGCCCAGGATGCCTaGAGACTTAGCCCCGGAGTCCTCGGAGTCGAGGGACACGTCGGA +
Preference number: 5 (lower is better)
Translates to: AAIPPAGTDIVAQDA*RLSPGVLGVEGHVG
Trigger: TCCGACGTGTCCCTCGACTCCGAGGACTCCGGGGCTAAGTCTCCAGGCATCCTGGGCTACAATATCTGTCCCCGCGGGTGGAATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGG +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDALCRRL*KSWTPR
Trigger: CCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGGACAGGTGCAGCCCATaGGCTGTCAGCAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWDRCSP*AVSSAA
Trigger: TGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTC...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGCCTGGCCGTCCTGTaGACCACTGATGGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGLAVL*TTDGGL
Trigger: CAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTCCAGAATGCCCGTCTaGCTGGCAGGAACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSSRMPV*LAGTAW
Trigger: CCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCTCCTGCTGGAAGTaGGAGGCCTCGGCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGSCWK*EASAPS
Trigger: ACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGCGGGCGAGGCAGCTCTaGGTGAGACCTTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: WEREVGGPRPPALRSFHLRARQL*VRPWQA
Trigger: AGCCTGCCAAGGTCTCACCAAGAGCTGCCTCGCCCG...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGGCCTGGGGGCCTGCTaGGCTCGGGGAGACCACGCC +
Preference number: 5 (lower is better)
Translates to: VESEAKTANGYMARGHPPGLGAC*ARGDHA
Trigger: GGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGATGCCCAGGGCTTaGGGCAGCTGCGGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESWMPRA*GSCGVP
Trigger: GGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGTGCTGGGACGCCCCTaGTTCCTCTCTGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSVLGRP*FLSGAA
Trigger: AGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCAC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS GCA 90 bp CCACGGGAATTGGAGCTGGGAGGGGTGGTCAGCTGGGCTGCAATCTaGTGGCTCCGCGCCTTGGCTTCTTTCAGATCCTTCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PRELELGGVVSWAAI*WLRALASFRSFSVR
Trigger: CCTCACGGAGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp CTGGACGCCACGGGAATTGGAGCTGGGAGGGGTGGTCAGCTGGGCTaGAATCTGCTGGCTCCGCGCCTTGGCTTCTTTCAGATCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LDATGIGAGRGGQLG*NLLAPRLGFFQILL
Trigger: GAGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp AAGAGCTGGACGCCACGGGAATTGGAGCTGGGAGGGGTGGTCAGCTaGGCTGCAATCTGCTGGCTCCGCGCCTTGGCTTCTTTCAGATCC +
Preference number: 5 (lower is better)
Translates to: KSWTPRELELGGVVS*AAICWLRALASFRS
Trigger: GGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCCTGGCCGTCCTGTaGACCACTGATGGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGLAVL*TTDGGL
Trigger: CAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGCC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTTCCAAGGAGCTGGGCTaGGCGGGCGAGGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDASKELG*AGEAAL
Trigger: AAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGA...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTCTCAAGGAGGGGAACTaGACCGGCAGTGGGACCCCC +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDALKEGN*TGSGTP
Trigger: GGGGGTCCCACTGCCGGTCAAGTTCCCCTCCTTGAG...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 90 bp GTGATGGGCAGCGGGCCAGCTCTGGCGTGTGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTGACTGGCGGCGGGCGTAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VMGSGPALACGLKTR*HISPSVTGGGRRAQ
Trigger: CTGAGCTCTACGCCCGCCGCCAGTCACGGATGGAGAAATATGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGCCCGCTGCCCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp ATTAGGAGTGTGCTGCATCTCACCTCCTCAGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTGCTGGGTTTGGAAGCAGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: IRSVLHLTSSAGAWG*PSAHRVLGLEAGPV
Trigger: CACAGGGCCTGCTTCCAAACCCAGCACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTGAGATGCAGCACACTCCTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CGGGAATTGGAGCTGGGAGGGGTGGTCAGCTGGGCTGCAATCTGCTaGCTCCGCGCCTTGGCTTCTTTCAGATCCTTCTCCGTGAGGCTA +
Preference number: 5 (lower is better)
Translates to: RELELGGVVSWAAIC*LRALASFRSFSVRL
Trigger: TAGCCTCACGGAGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCGCCGGCCTTCAAGCCTaGGTTCTCAAAGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGAGLQA*VLKASG
Trigger: GCCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGGC...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCGCCGGCCTTCAAGCCTaGGTTCTCAAAGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCAGLQA*VLKASG
Trigger: GCCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGGC...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519664.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTCGGTGGCTGGCGGATaGTGGCTGCTGTTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWSVAGG*WLLLEV
Trigger: AACTTCTAACAGCAGCCACAATCCGCCAGCCACCGA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTTCCAGAATGCCCGTCTaGCTGGCAGGAACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPSRMPV*LAGTAW
Trigger: CCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGA...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGGATGCGGGGTGACTaGAGGCAGGAGGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESWMRGD*RQEAHS
Trigger: AGAGTGGGCCTCCTGCCTCAAGTCACCCCGCATCCA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTCGGAGAGGTTCTGGTaGGGTTTGGGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSSERFW*GLGFGL
Trigger: CAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGGCCTGGGGGCCTGCTaGGCTCGGGGAGACCACGCC +
Preference number: 5 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEGLGAC*ARGDHA
Trigger: GGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCC...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTCAGCCAGGCGCTGGCTaGGGAACTGCCGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PESQPPRFREPVRACSQAQPGAG*GTAGFS
Trigger: TGAGAAACCGGCAGTTCCCAAGCCAGCGCCTGGCTG...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GGCAGGGACATGGTAGGTGATGGGCAGCGGGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACATATTTCTCCATCCGTGACTGGCGG +
Preference number: 5 (lower is better)
Translates to: GRDMVGDGQRASSGV*LEDSMTYFSIRDWR
Trigger: CCGCCAGTCACGGATGGAGAAATATGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGCCCGCTGCCCATCACCTACCATGTCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGACAGGTGCAGCCCATaGGCTGTCAGCAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPDRCSP*AVSSAA
Trigger: TGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGGGGCGAGGCAAGGTTTaGGTTGACATCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WEREVGGPRPPALRSFHLGRGKV*VDICSW
Trigger: CCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCC...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAKVNMD*RLPRRA
Trigger: GGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTT...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCTGGTATGGCGGCTGCTaGGTGGGCTCTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VESEAKTANGYMARGHPPWYGGC*VGSGRR
Trigger: CCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCA...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCGCTCTTGGTGAGACCTaGGCAGGCTCCTTGATAGGT +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSALGET*AGSLIG
Trigger: ACCTATCAAGGAGCCTGCCAAGGTCTCACCAAGAGC...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGCGCGGGGAGGCGCTCTaGCGCCGGGCCGCATTGATG +
Preference number: 5 (lower is better)
Translates to: TTTTHPRLPNIMECISRLRGEAL*RRAALM
Trigger: CATCAATGCGGCCCGGCGCAAGAGCGCCTCCCCGCG...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCCCTCGGCCCCCAGCCTaGCGAAGCTTCCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESPRPPA*RSFHLN
Trigger: ATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGG...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 90 bp GGTGTTGGGCTGGATGTCAATGAGCAGGGAGCTGGACATGAAATCTaGGGCTGGGGGCCTGGAGCTGGGGATGAGCGTAGCTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GVGLDVNEQGAGHEI*GWGPGAGDERSFSG
Trigger: TCCAGAGAAGCTACGCTCATCCCCAGCTCCAGGCCCCCAGCCTCAGATTTCATGTCCAGCTCCCTGCTCATTGACATCCAGCCCAACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TTAGAAGTTGGTGTGGTGAGCGTGGCACTGGGCGAGGCAAGGTTTTaGTTGACATCTGCAGCTGGGCTGTGGACCTCAGCTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LEVGVVSVALGEARF*LTSAAGLWTSAGGG
Trigger: CCCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCCAGTGCCACGCTCACCACACCAACTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CCGTCTTGCTGGCAGGAACCGCCTGGCCCTTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACAGGACAGAATATGAGGGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: PSCWQEPPGPSDEKT*GRSWDTGQNMREET
Trigger: GGTCTCCTCCCTCATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GCTAGTGGAGTGGTGGACCTCCAATCCCTCTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGGCAATCTGTAGCCGGACACCACACC +
Preference number: 5 (lower is better)
Translates to: ASGVVDLQSLFLTRL*CEAALGQSVAGHHT
Trigger: GGTGTGGTGTCCGGCTACAGATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCCACCACTCCACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CCCAAAGAGGCCAGACCCTTTGGGTCCCCCAGGTCTAATGAGCCTTCTTCTGGCTGCTGGCTCCGCGCCTaGGCTTCTTTCAGATCCTTC +
Preference number: 5 (lower is better)
Translates to: PKEARPFGSPRSNEPSSGCWLRA*ASFRSF
Trigger: GAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCA...GCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGCATCAGACTCTGCTGCTGGCTCCGCGCCTaGGCTTCTTTCAGATCCTTC +
Preference number: 5 (lower is better)
Translates to: LGSPSRPLPQQDAGIRLCCWLRA*ASFRSF
Trigger: GAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCA...GCAGAGTCTGATGCCAGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGTGGACGCCACGGGAATaGGAGCTGGGAGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GPYTHCPASSKALTSVCVWTPRE*ELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCA...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTCGGTGGCTGGCGGATaGTGGCTGCTGTTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFSVAGG*WLLLEV
Trigger: AACTTCTAACAGCAGCCACAATCCGCCAGCCACCGA...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGGCCTGGCCGTCCTGTaGACCACTGATGGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GPYTHCPASSKALTSVCVGLAVL*TTDGGL
Trigger: CAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGCC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TCACGTACCCAAGCTCATCGGCCCCTAAATTCAAGCCCAACTAGCCCACCACCATGGATGCGGGGTGACTaGAGGCAGGAGGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SRTQAHRPLNSSPTSPPPWMRGD*RQEAHS
Trigger: AGAGTGGGCCTCCTGCCTCAAGTCACCCCGCATCCA...TGGTGGTGGGCTAGTTGGGCTTGAATTTAGGGGCCGATGAGCTTGGGTACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GAGGGACGAGTATGGAACCCTGAAGGTAGCAAGTCCAGGGGTCCATATACACACCGGGCGAGGCAGCTCTaGGTGAGACCTTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EGRVWNPEGSKSRGPYTHRARQL*VRPWQA
Trigger: AGCCTGCCAAGGTCTCACCAAGAGCTGCCTCGCCCG...GTGTGTATATGGACCCCTGGACTTGCTACCTTCAGGGTTCCATACTCGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGGCCTGGGGGCCTGCTaGGCTCGGGGAGACCACGCC +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSGLGAC*ARGDHA
Trigger: GGCGTGGTCTCCCCGAGCCAAGCAGGCCCCCAGGCC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWNATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCACCTCGGCCCCCAGCCTaGCGAAGCTTCCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSPRPPA*RSFHLN
Trigger: ATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGG...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CTGTGGGACAACAGTTGCCGGTGGGTTCTGATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTTAGAAGTTGGTGTGGTGAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LWDNSCRWVLIDIGG*RIVAAVRSWCGERG
Trigger: GCCACGCTCACCACACCAACTTCTAACAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CAGGAACCGCCTGGCCCTTCAGATGAGAAGACTTGGGGTCGGAGCTaGGATACAGGACAGAATATGAGGGAGGAGACCTCACCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QEPPGPSDEKTWGRS*DTGQNMREETSPRK
Trigger: CTTCCTGGGTGAGGTCTCCTCCCTCATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTGAGGCCCAGAGATTGGAAGAGGTTGTCTGAGGTCACACACGAATCAGATGCATGGACGCCACGGGAATaGGAGCTGGGAGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: LRPRDWKRLSEVTHESDAWTPRE*ELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCA...TGCATCTGATTCGTGTGTGACCTCAGACAACCTCTTCCAATCTCTGGGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGTGGACGCCACGGGAATaGGAGCTGGGAGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRWTPRE*ELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCA...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACCACCACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGG +
Preference number: 5 (lower is better)
Translates to: TTTTHPRLPNIMECISRLLCRRL*KSWTPR
Trigger: CCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAG...CAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGTGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTGAGGCAAGGTTTTGGTaGACATCTGCAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPEARFW*TSAAGL
Trigger: CAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTC...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGAGCCGGTGCCTGGGGTaGCCCATCAGCACACAGGGT +
Preference number: 5 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRSRCLG*PISTQG
Trigger: ACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGTCCAGAATGCCCGTCTaGCTGGCAGGAACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGCIISPPKVSEAMGSLQSRMPV*LAGTAW
Trigger: CCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGA...CTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCAGAAGTCCCTGTTAGGATCCCCTTCTAGGCCACTCCCCCAGCAAGACGCTGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LQKSLLGSPSRPLPQQDAGFGVT*GFSTKV
Trigger: TACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCC...AGCGTCTTGCTGGGGGAGTGGCCTAGAAGGGGATCCTAACAGGGACTTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTA +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESGFGVT*GFSTKV
Trigger: TACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCC...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGGGCGAGGCAGCTCTaGGTGAGACCTTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRRARQL*VRPWQA
Trigger: AGCCTGCCAAGGTCTCACCAAGAGCTGCCTCGCCCG...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTCCCAGGGGACTGTCTaGTCACTTACAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFSQGTV*SLTRPF
Trigger: GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGA...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTCAGCCTGGCCGCAGGAGCTGCAGAATGAAGGGCGGGCTCTTCCATTGGTGGTCTGAATCCTGCCACTaGTGTCTGTATTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: AQPGRRSCRMKGGLFHWWSESCH*CLYSLT
Trigger: GGTGAGAGAATACAGACACAAGTGGCAGGATTCAGA...CCACCAATGGAAGAGCCCGCCCTTCATTCTGCAGCTCCTGCGGCCAGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTTGGTGTGAGGCCGCTTaGGGGCAATACCACAGGAAT +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPWCEAA*GQYHRN
Trigger: ATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACCA...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS TCA 90 bp TCCAGAATGCCCGTCTTGCTGGCAGGAACCGCCTGGCCCTTCAGATaGGAAGACTTGGGGTCGGAGCTGGGATACAGGACAGAATATGAG +
Preference number: 5 (lower is better)
Translates to: SRMPVLLAGTAWPFR*EDLGSELGYRTEYE
Trigger: CTCATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CTGATTGACATCGGTGGCTGGCGGATTGTGGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACTGGGCGAGGCAAGGTTTTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: LIDIGGWRIVAAVRS*CGERGTGRGKVLVD
Trigger: GTCAACCAAAACCTTGCCTCGCCCAGTGCCACGCTCACCACACCAACTTCTAACAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACTGGACGCCACGGGAATaGGAGCTGGGAGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYWTPRE*ELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCA...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGGTGTGCACAGTACGAAAAGGCTGCAGGAAATCAGAACTGTTCACTTTCTGACCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGG +
Preference number: 5 (lower is better)
Translates to: GCAQYEKAAGNQNCSLSDLCRRL*KSWTPR
Trigger: CCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAG...GTCAGAAAGTGAACAGTTCTGATTTCCTGCAGCCTTTTCGTACTGTGCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAAGCCGGTGCCTGGGGTaGCCCATCAGCACACAGGGT +
Preference number: 5 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGSRCLG*PISTQG
Trigger: ACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCT...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GAAATACAGGCAGACCCTAACTTAACACCCTGCTCACGTACCCAAGCTCATCGGTCCAGAATGCCCGTCTaGCTGGCAGGAACCGCCTGG +
Preference number: 5 (lower is better)
Translates to: EIQADPNLTPCSRTQAHRSRMPV*LAGTAW
Trigger: CCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGA...CCGATGAGCTTGGGTACGTGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLKVNMD*RLPRRA
Trigger: GGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTT...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAAGGCTCCTGCTGGAAGTaGGAGGCCTCGGCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: STFLGTIWTLGLRSDTEEGSCWK*EASAPS
Trigger: ACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCC...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp AGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTTCGGAGAGGTTCTGGTaGGGTTTGGGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SKSRGPYTHCPASSKALTSERFW*GLGFGL
Trigger: CAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGA...AGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCTCGGAGAGGTTCTGGTaGGGTTTGGGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: PECCREEALISNPAHVCTSERFW*GLGFGL
Trigger: CAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGA...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTGGTATGGCGGCTGCTaGGTGGGCTCTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGWYGGC*VGSGRR
Trigger: CCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCACCTTGGCAGGCTCCTaGATAGGTGAGAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESTLAGS*IGERTK
Trigger: CTTTGTCCTCTCACCTATCAAGGAGCCTGCCAAGGT...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATCCAAGGAGCTGGGCTaGGCGGGCGAGGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGSKELG*AGEAAL
Trigger: AAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCTCAAGGAGGGGAACTaGACCGGCAGTGGGACCCCC +
Preference number: 5 (lower is better)
Translates to: TKPGLVGGCIISPPKVSELKEGN*TGSGTP
Trigger: GGGGGTCCCACTGCCGGTCAAGTTCCCCTCCTTGAG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTCCCAGGGGACTGTCTaGTCACTTACAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: KRSGWSSAPSLAKLPSESSQGTV*SLTRPF
Trigger: GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGA...GGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CCTGAGTGCTGTAGAGAGGAAGCCCTCATTTCCAACCCAGCACACGTCTGTACCGCACACCAGAGCTCCTaGGGAATGCGGTGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PECCREEALISNPAHVCTAHQSS*GMRWVK
Trigger: TTTCACCCACCGCATTCCCAAGGAGCTCTGGTGTGC...GGTACAGACGTGTGCTGGGTTGGAAATGAGGGCTTCCTCTCTACAGCACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp GCTCACAAAGGCCAGAGGATGCCCCTCTACCGCATCAGGGCTGCCAGACAGTTCTCTGTGTGTATGTTTTaGAGTCGGGGGTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: AHKGQRMPLYRIRAARQFSVCMF*SRGCAQ
Trigger: CTGTGCACACCCCCGACTCAAAAACATACACACAGA...GAACTGTCTGGCAGCCCTGATGCGGTAGAGGGGCATCCTCTGGCCTTTGTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS TCA 90 bp TGGAGTGGTGGACCTCCAATCCCTCTTCTTAACCCGTCTCTGGTGTaGGGCCGCTTTGGGGCAATACCACAGGAATCACAGGAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: WSGGPPIPLLNPSLV*GRFGAIPQESQEWC
Trigger: ACACCACTCCTGTGATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCCACCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS CCA 90 bp GTGAGGACTGCTGGGCCTCTCGGTTTTGGGACAGGTGCAGCCCATTaGCTGTCAGCAGTGCTGCATTCTCCTTTAGATAAACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: VRTAGPLGFGTGAAH*LSAVLHSPLDKPPV
Trigger: CACTGGTGGTTTATCTAAAGGAGAATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCAGCAGTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TTGGATGCTAGAAAGTGGCAGGCTCTGTGGGACAACAGTTGCCGGTaGGTTCTGATTGACATCGGTGGCTGGCGGATTGTGGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LDARKWQALWDNSCR*VLIDIGGWRIVAAV
Trigger: AACAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp AGGGTGCTGGGTTTGGAAGCAGGCCCTGTGCCATTAGATGGGAGTTaGGCCTCTGAGGAATTCTGTTGGATGCTAGAAAGTGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RVLGLEAGPVPLDGS*ASEEFCWMLESGRL
Trigger: GAGCCTGCCACTTTCTAGCATCCAACAGAATTCCTCAGAGGCCCAACTCCCATCTAATGGCACAGGGCCTGCTTCCAAACCCAGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CTGCCGCCGCTTCTCATCCGCTGTCTGTACCAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGGCTTCTCCACGAAAGTAAACATGGA +
Preference number: 5 (lower is better)
Translates to: LPPLLIRCLYQIQQV*IRGHLGLLHESKHG
Trigger: TCCATGTTTACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTGGTACAGACAGCGGATGAGAAGCGGCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp GCTAGTGGAGTGGTGGACCTCCAATCCCTCTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGGCAATACCACAGGAATCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: ASGVVDLQSLFLTRL*CEAALGQYHRNHRS
Trigger: ACTCCTGTGATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCCACCACTCCACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS-3UTR CAA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGTGGATGCGGGGTGACTaGAGGCAGGAGGCCCACTCT +
Preference number: 5 (lower is better)
Translates to: TKPGLVGGCIISPPKVSEWMRGD*RQEAHS
Trigger: AGAGTGGGCCTCCTGCCTCAAGTCACCCCGCATCCA...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGATCCTGAAGCTAATATGGTATGGCGGCTGCTaGGTGGGCTCTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HTFDPQPIPYPQLILKLIWYGGC*VGSGRR
Trigger: CCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCA...TATTAGCTTCAGGATCAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTCCAAGGAGCTGGGCTaGGCGGGCGAGGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGSKELG*AGEAAL
Trigger: AAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TCTACTTTTCTGGGCACGATATGGACACTGGGACTGAGGTCTGACACTGAAGAAGGGAGGCTGCCACGCTaGAGCCGAAGGCTGCCATTC +
Preference number: 5 (lower is better)
Translates to: STFLGTIWTLGLRSDTEEGRLPR*SRRLPF
Trigger: GAATGGCAGCCTTCGGCTCAAGCGTGGCAGCCTCCC...TTCTTCAGTGTCAGACCTCAGTCCCAGTGTCCATATCGTGCCCAGAAAAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTGGATGCCCAGGGCTTaGGGCAGCTGCGGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFWMPRA*GSCGVP
Trigger: GGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCATCCCAGGGGACTGTCTaGTCACTTACAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSQGTV*SLTRPF
Trigger: GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGA...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGGAAAGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGTTCCCAGGGTCAGAATaGTGTATACATGAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: WEREVGGPRPPALRSFHLFPGSE*CIHEPE
Trigger: CTCTGGCTCATGTATACACAATTCTGACCCTGGGAA...CAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS TCA 90 bp CTAGAAAGTGGCAGGCTCTGTGGGACAACAGTTGCCGGTGGGTTCTaGTTGACATCGGTGGCTGGCGGATTGTGGCTGCTGTTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LESGRLCGTTVAGGF*LTSVAGGLWLLLEV
Trigger: AACTTCTAACAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS GCA 90 bp GCCTTCAAGCCTTGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTaGTTGGCTGACGAAGCCAGGAAAATCCCACATCGGCAGCAACAT +
Preference number: 5 (lower is better)
Translates to: AFKPWFSKPPAKAAN*LADEARKIPHRQQH
Trigger: ATGTTGCTGCCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCAAGGCTTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS GCA 90 bp ATTCTGTTGGATGCTAGAAAGTGGCAGGCTCTGTGGGACAACAGTTaGCGGTGGGTTCTGATTGACATCGGTGGCTGGCGGATTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ILLDARKWQALWDNS*RWVLIDIGGWRIVA
Trigger: AGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAACAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGG +
Preference number: 5 (lower is better)
Translates to: IFLKILRSPLSLPTALLCLCRRL*KSWTPR
Trigger: CCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAG...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGAGGCAAGGTTTTGGTaGACATCTGCAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPYTHCPASSKALTSVCVEARFW*TSAAGL
Trigger: CAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGGAGGCAAGGTTTTGGTaGACATCTGCAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLEARFW*TSAAGL
Trigger: CAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTC...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCGAGGCAAGGTTTTGGTaGACATCTGCAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VESEAKTANGYMARGHPPEARFW*TSAAGL
Trigger: CAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTC...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGAAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGKVNMD*RLPRRA
Trigger: GGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTT...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GGTCCATATACACACTGCCCCGCCTCATCCAAGGCACTAACTAGTGTGTGTGTGGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTA +
Preference number: 5 (lower is better)
Translates to: GPYTHCPASSKALTSVCVGFGVT*GFSTKV
Trigger: TACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCC...CACACACACACTAGTTAGTGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTCGGGCGAGGCAGCTCTaGGTGAGACCTTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSRARQL*VRPWQA
Trigger: AGCCTGCCAAGGTCTCACCAAGAGCTGCCTCGCCCG...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGATTGCGCCGGGCCGCATaGATGATGTTTCGCGCCAGA +
Preference number: 5 (lower is better)
Translates to: RKHLLRARAAFYKRQEAGLRRAA*MMFRAR
Trigger: TCTGGCGCGAAACATCATCAATGCGGCCCGGCGCAA...TCCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TGTATCTCTTCTCTCCCCAGTTCAGCTTTGAGCCCAGAACCTGCCATGAATGGGCTCCCCAGTTCAGCTTaGAGCCCAGAACCTGCCATG +
Preference number: 5 (lower is better)
Translates to: CISSLPSSALSPEPAMNGLPSSA*SPEPAM
Trigger: CATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAG...CCCATTCATGGCAGGTTCTGGGCTCAAAGCTGAACTGGGGAGAGAAGAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCACCCTCCCTGGCCGCATCTGACCTaGAACCATGGACTCCCCATT +
Preference number: 5 (lower is better)
Translates to: VESEAKTANGYMARGHPPWPHLT*NHGLPI
Trigger: AATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCA...GGGAGGGTGGCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CTCCTGCCATGCTCCTACTGTCCCCAGGCAATCCTGAGCCTAAGCCAGCCCAGCTTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LLPCSYCPQAILSLSQPSLVRQI*VESEAK
Trigger: TTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAA...GCTGGGCTGGCTTAGGCTCAGGATTGCCTGGGGACAGTAGGAGCATGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGAGAAGTGGGTGGTCCTCGGCCCCCAGCCTTGCGAAGCTTCCATCTGAATCCTTCTGAATCCTGCCACTaGTGTCTGTATTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: REVGGPRPPALRSFHLNPSESCH*CLYSLT
Trigger: GGTGAGAGAATACAGACACAAGTGGCAGGATTCAGA...AGGATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGGACCACCCACTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp TCAAGCCTTGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTGCTTaGCTGACGAAGCCAGGAAAATCCCACATCGGCAGCAACATGAAG +
Preference number: 5 (lower is better)
Translates to: SSLGSQSLRQRQPIA*LTKPGKSHIGSNMK
Trigger: CTTCATGTTGCTGCCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCAAGGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS CCA 90 bp CAGAATTGGGGTGAGGTCTGGCTGAGACGAAAGATAAGTCCTTCCTaGGCTAGTGGAGTGGTGGACCTCCAATCCCTCTTCTTAACCCGT +
Preference number: 5 (lower is better)
Translates to: QNWGEVWLRRKISPS*ASGVVDLQSLFLTR
Trigger: ACGGGTTAAGAAGAGGGATTGGAGGTCCACCACTCCACTAGCCCAGGAAGGACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 90 bp GCACTTTTGCCTTCCTCCGCTGATTCACAGAATTGGGGTGAGGTCTaGCTGAGACGAAAGATAAGTCCTTCCTGGGCTAGTGGAGTGGTG +
Preference number: 5 (lower is better)
Translates to: ALLPSSADSQNWGEV*LRRKISPSWASGVV
Trigger: CACCACTCCACTAGCCCAGGAAGGACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATTCTGTGAATCAGCGGAGGAAGGCAAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS-3UTR CAA 90 bp CCAAGTCCTGGGCCTAAGGGAAATCACTGCCTTATAATTCTCTTATGGCTGCAGGACAGGTGCAGCCCATaGGCTGTCAGCAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PSPGPKGNHCLIILLWLQDRCSP*AVSSAA
Trigger: TGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTC...CTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGGAAGCATTTATTGAGGGCCAGAGCTGCATTCTACAAGAGGCAAGAGGCAGGTCGGTGGCTGGCGGATaGTGGCTGCTGTTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: QEAFIEGQSCILQEARGRSVAGG*WLLLEV
Trigger: AACTTCTAACAGCAGCCACAATCCGCCAGCCACCGA...CCTGCCTCTTGCCTCTTGTAGAATGCAGCTCTGGCCCTCAATAAATGCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGCTGGAGTTGATACCTaGTCAATTAGGAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSAGVDT*SIRSVL
Trigger: CAGCACACTCCTAATTGACAAGGTATCAACTCCAGC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAAAGAGGCCAGACCCTTaGGGTCCCCCAGGTCTAATG +
Preference number: 5 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPKRPDP*GPPGLM
Trigger: CATTAGACCTGGGGGACCCAAAGGGTCTGGCCTCTT...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CCTGAATCACAGCCACCAAGGTTTAGGGAACCAGTGAGGGCCTGCAGCCAGGCTATGGGAAGGGGAATTTaGACGTTTGTGGATTGCCTT +
Preference number: 5 (lower is better)
Translates to: PESQPPRFREPVRACSQAMGRGI*TFVDCL
Trigger: AAGGCAATCCACAAACGTCAAAATTCCCCTTCCCAT...AGCCTGGCTGCAGGCCCTCACTGGTTCCCTAAACCTTGGTGGCTGTGATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CCAAGTCCTGGGCCTAAGGGAAATCACTGCCTTATAATTCTCTTATGGCTGCAGCTGAACACACCCCGCTaGCCAGACTCCAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: PSPGPKGNHCLIILLWLQLNTPR*PDSRQQ
Trigger: CTGCTGTCTGGAGTCTGGCAAGCGGGGTGTGTTCAG...CTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTGGTGTGAGGCCGCTTaGGGGCAATCTGTAGCCGGA +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGWCEAA*GQSVAG
Trigger: TCCGGCTACAGATTGCCCCAAAGCGGCCTCACACCA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAAAGACGCCAGGAGCTaGAGCCTCAGGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSKDARS*SLRREA
Trigger: GGCCTCCCTCCTGAGGCTCAAGCTCCTGGCGTCTTT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TCCAAGCTCCCAGTCATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGACAAAAGGTTGCGATTaGCACAGGGTTCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SKLPVIKLKVKAQPGIPLTKGCD*HRVLAP
Trigger: GGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGT...CAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGATGACTGGGAGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCTGCTGGCTCCGCGCCTaGGCTTCTTTCAGATCCTTC +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGCWLRA*ASFRSF
Trigger: GAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCA...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTGACAGGTGCAGCCCATaGGCTGTCAGCAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSDRCSP*AVSSAA
Trigger: TGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTC...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGGGGCGAGGCAAGGTTTaGGTTGACATCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TTHPRLPNIMECISRLEEGRGKV*VDICSW
Trigger: CCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCC...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGGACCTTGGCAGGCTCCTaGATAGGTGAGAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: QSLVWSGAVSYHLQKCQRTLAGS*IGERTK
Trigger: CTTTGTCCTCTCACCTATCAAGGAGCCTGCCAAGGT...CCTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ATCAAGCTGAAAGTTAAGGCTCAGCCTGGGATCCCACTGTTTTCTTCCCAGGGTGCTCTTGGTGAGACCTaGGCAGGCTCCTTGATAGGT +
Preference number: 5 (lower is better)
Translates to: IKLKVKAQPGIPLFSSQGALGET*AGSLIG
Trigger: ACCTATCAAGGAGCCTGCCAAGGTCTCACCAAGAGC...ACCCTGGGAAGAAAACAGTGGGATCCCAGGCTGAGCCTTAACTTTCAGCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTCCAAGGAGCTGGGCTaGGCGGGCGAGGCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSSKELG*AGEAAL
Trigger: AAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCATCCCTCCAGCCTCACTaGGGGGTTCCAGATCTAACA +
Preference number: 5 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPSLQPH*GVPDLT
Trigger: TGTTAGATCTGGAACCCCCAAGTGAGGCTGGAGGGA...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCATCAGGCAGATCTTGGTaGAATCTGAAGCCAAAACAG +
Preference number: 5 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSSGRSW*NLKPKQ
Trigger: CTGTTTTGGCTTCAGATTCAACCAAGATCTGCCTGA...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCCCTCGGCCCCCAGCCTaGCGAAGCTTCCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFPRPPA*RSFHLN
Trigger: ATTCAGATGGAAGCTTCGCAAGGCTGGGGGCCGAGG...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CAGCTGGTGGCCGCATCTGACCTTGAACCATGGACTCCCCATTCTCCTCACTCAGGAAAGAACAAAAGGTaGCGATTTGCACAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: QLVAASDLEPWTPHSPHSGKNKR*RFAQGS
Trigger: AGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCC...TGAGTGAGGAGAATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp ACCAAATGGTCTCTGACCTCCTTCTGTAATCCTTTCACTGCACAGAAGGGGAAAGGGCGAGGCAAGGTTTaGGTTGACATCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TKWSLTSFCNPFTAQKGKGRGKV*VDICSW
Trigger: CCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCC...TTTCCCCTTCTGTGCAGTGAAAGGATTACAGAAGGAGGTCAGAGACCATTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAAGCCGGTGCCTGGGGTaGCCCATCAGCACACAGGGT +
Preference number: 5 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKSRCLG*PISTQG
Trigger: ACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCT...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTA +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGGFGVT*GFSTKV
Trigger: TACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCC...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAACCTTGGCAGGCTCCTaGATAGGTGAGAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPTLAGS*IGERTK
Trigger: CTTTGTCCTCTCACCTATCAAGGAGCCTGCCAAGGT...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GTATCCTTTCACCTACATACGTTTGATCCTCAGCCAATTCCATACCCCCAGCTGGCTCTTGGTGAGACCTaGGCAGGCTCCTTGATAGGT +
Preference number: 5 (lower is better)
Translates to: VSFHLHTFDPQPIPYPQLALGET*AGSLIG
Trigger: ACCTATCAAGGAGCCTGCCAAGGTCTCACCAAGAGC...CAGCTGGGGGTATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAAAGGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACCGTGGGGTTCGTTACTaGAAGCAGAAGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYRGVRY*KQKEGF
Trigger: GAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCACG...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACAAAGCCTGGTTTGGTCGGGGGCTGTATCATATCACCTCCAAAAGTGTCAGAGCGTGGGGTTCGTTACTaGAAGCAGAAGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TKPGLVGGCIISPPKVSERGVRY*KQKEGF
Trigger: GAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCACG...CTCTGACACTTTTGGAGGTGATATGATACAGCCCCCGACCAAACCAGGCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCGGGCGAGGCAAGGTTTaGGTTGACATCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IFLKILRSPLSLPTALLCGRGKV*VDICSW
Trigger: CCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCC...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GGAAGGAAAGAACAAAAGGTTGCGATTTGCACAGGGTTCTGGCTCCCTGAGTGCGCTGGAGTTGATACCTaGTCAATTAGGAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GRKEQKVAICTGFWLPECAGVDT*SIRSVL
Trigger: CAGCACACTCCTAATTGACAAGGTATCAACTCCAGC...GCACTCAGGGAGCCAGAACCCTGTGCAAATCGCAACCTTTTGTTCTTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSKVNMD*RLPRRA
Trigger: GGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTT...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAAGTGCTGGGACGCCCCTaGTTCCTCTCTGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKVLGRP*FLSGAA
Trigger: AGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCAC...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTGGCCGCATCTGACCTaGAACCATGGACTCCCCATT +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFWPHLT*NHGLPI
Trigger: AATGGGGAGTCCATGGTTCAAGGTCAGATGCGGCCA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYNATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp AGTCCTCTGGGAAATGCAGGTAGAAATGGATCCTCTATGCTACTGCCTCAGCCAGCTGGAGTTGATACCTaGTCAATTAGGAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SPLGNAGRNGSSMLLPQPAGVDT*SIRSVL
Trigger: CAGCACACTCCTAATTGACAAGGTATCAACTCCAGC...TGGCTGAGGCAGTAGCATAGAGGATCCATTTCTACCTGCATTTCCCAGAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp GCTGTATCATATCACCTCCAAAAGTGTCAGAGGCGATGGGAAGTCTCCAGCTACGCTGGAGTTGATACCTaGTCAATTAGGAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AVSYHLQKCQRRWEVSSYAGVDT*SIRSVL
Trigger: CAGCACACTCCTAATTGACAAGGTATCAACTCCAGC...GTAGCTGGAGACTTCCCATCGCCTCTGACACTTTTGGAGGTGATATGATACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTCGGAGAGGTTCTGGTaGGGTTTGGGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSSERFW*GLGFGL
Trigger: CAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCAACCTTGGCAGGCTCCTaGATAGGTGAGAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKATLAGS*IGERTK
Trigger: CTTTGTCCTCTCACCTATCAAGGAGCCTGCCAAGGT...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GAAGGTAGCAAGTCCAGGGGTCCATATACACACTGCCCCGCCTCATCCAAGGCAGTAACAAGTAACTCTTaGTCTCTCTCTTTCCCAATA +
Preference number: 5 (lower is better)
Translates to: EGSKSRGPYTHCPASSKAVTSNS*SLSFPI
Trigger: TATTGGGAAAGAGAGAGACAAAGAGTTACTTGTTAC...TGCCTTGGATGAGGCGGGGCAGTGTGTATATGGACCCCTGGACTTGCTACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CCAAGTCCTGGGCCTAAGGGAAATCACTGCCTTATAATTCTCTTATGGCTGCAGTGCAGGAAGCATTTATaGAGGGCCAGAGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: PSPGPKGNHCLIILLWLQCRKHL*RARAAF
Trigger: GAATGCAGCTCTGGCCCTCAATAAATGCTTCCTGCA...CTGCAGCCATAAGAGAATTATAAGGCAGTGATTTCCCTTAGGCCCAGGACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp TCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTCAAAGCACGTGGGGTTCGTTACTaGAAGCAGAAGGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SLSSQGTVLSLTRPFFKARGVRY*KQKEGF
Trigger: GAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCACG...TGCTTTGAAGAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCGCATTGTTTCTGCCTTaGGTGGCCACAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFALFLP*VATRGM
Trigger: CATTCCCCTTGTGGCCACCAAAGGCAGAAACAATGC...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTTCGGTGGCTGGCGGATaGTGGCTGCTGTTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSSVAGG*WLLLEV
Trigger: AACTTCTAACAGCAGCCACAATCCGCCAGCCACCGA...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTGCTCTTGGTGAGACCTaGGCAGGCTCCTTGATAGGT +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSALGET*AGSLIG
Trigger: ACCTATCAAGGAGCCTGCCAAGGTCTCACCAAGAGC...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACCACCCACCCCCGACTTCCTAATATCATGGAATGCATTTCAAGACTGGAAGAGCAGCAGGTAGGGGCTTaGGTAAATATAGTCACTCAT +
Preference number: 5 (lower is better)
Translates to: TTHPRLPNIMECISRLEEQQVGA*VNIVTH
Trigger: ATGAGTGACTATATTTACCAAAGCCCCTACCTGCTG...CTCTTCCAGTCTTGAAATGCATTCCATGATATTAGGAAGTCGGGGGTGGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CAGATCTTGGTTGAATCTGAAGCCAAAACAGCCAATGGATACATGGCTAGGGGCCTCAATCCTCACAGATaGTTACAGCTAGAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QILVESEAKTANGYMARGLNPHR*LQLEKP
Trigger: GGGCTTTTCTAGCTGTAACAATCTGTGAGGATTGAG...GCCCCTAGCCATGTATCCATTGGCTGTTTTGGCTTCAGATTCAACCAAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ATTTTCCTCAAAATTCTAAGATCTCCTCTGTCCCTTCCCACTGCACTGCTATGCAACGCCACCTGTCCTTaGGCAATAGCCCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: IFLKILRSPLSLPTALLCNATCP*AIAHFL
Trigger: AAGGAAATGGGCTATTGCCAAAGGACAGGTGGCGTT...GCATAGCAGTGCAGTGGGAAGGGACAGAGGAGATCTTAGAATTTTGAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTTCTGAATCCTGCCACTaGTGTCTGTATTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSSESCH*CLYSLT
Trigger: GGTGAGAGAATACAGACACAAGTGGCAGGATTCAGA...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp ACATTTCCAAGGGGACCAGAAATACAGGCAGACCCTAACTTAACACCCTGCTCATTCACCTACATACGTTaGATCCTCAGCCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: TFPRGPEIQADPNLTPCSFTYIR*ILSQFH
Trigger: ATGGAATTGGCTGAGGATCAAACGTATGTAGGTGAA...TGAGCAGGGTGTTAAGTTAGGGTCTGCCTGTATTTCTGGTCCCCTTGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTCAGGCAGATCTTGGTaGAATCTGAAGCCAAAACAG +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFSGRSW*NLKPKQ
Trigger: CTGTTTTGGCTTCAGATTCAACCAAGATCTGCCTGA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGGAAACTGAGACCTACAGACACACATGCAGTTGGTCTGTTAGAATCCAGGTCTAGAAGCAAGACGGATTaGAGGCAGAGTGTATTGAGA +
Preference number: 5 (lower is better)
Translates to: WKLRPTDTHAVGLLESRSRSKTD*RQSVLR
Trigger: TCTCAATACACTCTGCCTCAAATCCGTCTTGCTTCT...AGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS-3UTR CAA 90 bp CATTTCCTTTCTCTTTCTTCCCAGGGGACTGTCTTGTCACTTACAAGGCCTTTCTTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: HFLSLSSQGTVLSLTRPFLVRQI*VESEAK
Trigger: TTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAA...GAAAGGCCTTGTAAGTGACAAGACAGTCCCCTGGGAAGAAAGAGAAAGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 90 bp CACTGTATGAATGTGGAAACTGAGACCTACAGACACACATGCAGTTaGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HCMNVETETYRHTCS*SVRIQVSSPRFSSK
Trigger: TTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGCATGTGTGTCTGTAGGTCTCAGTTTCCACATTCATACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp GCAGTTGGTCTGTTAGAATCCAGGTCTCAAGTCCCAGATTTTCCTCAAAATTCTCTCAATCCTCACAGATaGTTACAGCTAGAAAAGCCC +
Preference number: 5 (lower is better)
Translates to: AVGLLESRSQVPDFPQNSLNPHR*LQLEKP
Trigger: GGGCTTTTCTAGCTGTAACAATCTGTGAGGATTGAG...AGAATTTTGAGGAAAATCTGGGACTTGAGACCTGGATTCTAACAGACCAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS-3UTR CAA 90 bp TGTAAAGAACCCAAACAAACCTCAACGAGAAGAGGTAGTGCATTTTCCCCAAAATTAGTCAGGCAGATCTaGGTTGAATCTGAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: CKEPKQTSTRRGSAFSPKLVRQI*VESEAK
Trigger: TTTGGCTTCAGATTCAACCAAGATCTGCCTGACTAA...TTTTGGGGAAAATGCACTACCTCTTCTCGTTGAGGTTTGTTTGGGTTCTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CCA 72 bp AGGGCCTGGGAGGCGCGGGCAGCGGGCTCCGGGGACTaGTGCAGGACGAAGGACCGGCGGGCAACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RAWEARAAGSGD*CRTKDRRATGS
Trigger: GGAGCCCGTTGCCCGCCGGTCCTTCGTCCTGCACCAGTCCCCGGAGCCCGCTGCCCGCGCCTCCCAGGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 72 bp AGGACGAAGGACCGGCGGGCAACGGGCTCCGCGGGATaGGCGCGAAGGCTGCCCCCGGCACAGCAGCCGAGC +
Preference number: 6 (lower is better)
Translates to: RTKDRRATGSAG*ARRLPPAQQPS
Trigger: GCTCGGCTGCTGTGCCGGGGGCAGCCTTCGCGCCCATCCCGCGGAGCCCGTTGCCCGCCGGTCCTTCGTCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS GCA 72 bp CTCCTCCGCCGCCGCGGGGCTGGCCCTGTCACGAGGTaGTGGCTCCTGCTGGAAGTTGGAGGCCTCGGCCCC +
Preference number: 6 (lower is better)
Translates to: LLRRRGAGPVTR*WLLLEVGGLGP
Trigger: GGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGAGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp TCGGCGCCCGCCGACCGCGGGGAGGCGCTCTTGCGCCGGGCCGCATaGATGATGTTTCGCGCCAGAAGCGCCTGCAGCTGGCGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SAPADRGEALLRRAA*MMFRARSACSWRLG
Trigger: CCCCAGCCGCCAGCTGCAGGCGCTTCTGGCGCGAAACATCATCAATGCGGCCCGGCGCAAGAGCGCCTCCCCGCGGTCGGCGGGCGCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS GCA 72 bp GCCGGACACCACACCCTCTGGCACAGCAACTGGCTGTaGCCGGGCCTCTGTCCACGGCTGCCCGGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: AGHHTLWHSNWL*PGLCPRLPGCP
Trigger: CGGGCAGCCGGGCAGCCGTGGACAGAGGCCCGGGCACAGCCAGTTGCTGTGCCAGAGGGTGTGGTGTCCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CAA 90 bp GCCGCGGGGCTGGCCCTGTCACGAGGTGCTGGCTCCTGCTGGAAGTaGGAGGCCTCGGCCCCCAGTGCGAAGGGCTCCTCCTCCACGCCT +
Preference number: 6 (lower is better)
Translates to: AAGLALSRGAGSCWK*EASAPSAKGSSSTP
Trigger: AGGCGTGGAGGAGGAGCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp GCGGGGCTGGCCCTGTCACGAGGTGCTGGCTCCTGCTaGAAGTTGGAGGCCTCGGCCCCCAGTGCGAAGGGC +
Preference number: 6 (lower is better)
Translates to: AGLALSRGAGSC*KLEASAPSAKG
Trigger: GCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp GTGGTGCAGGAGGCCTCGGCGGGGAGGCTGCCACGCTaGAGCCGAAGGCTGCCATTCCACCCGCGGGGACAG +
Preference number: 6 (lower is better)
Translates to: VVQEASAGRLPR*SRRLPFHPRGQ
Trigger: CTGTCCCCGCGGGTGGAATGGCAGCCTTCGGCTCAAGCGTGGCAGCCTCCCCGCCGAGGCCTCCTGCACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS TCA 72 bp TGGTGCAGGAGGCCTCGGCGGGGAGGCTGCCACGCTTaGGCCGAAGGCTGCCATTCCACCCGCGGGGACAGA +
Preference number: 6 (lower is better)
Translates to: WCRRPRRGGCHA*AEGCHSTRGDR
Trigger: TCTGTCCCCGCGGGTGGAATGGCAGCCTTCGGCTCAAGCGTGGCAGCCTCCCCGCCGAGGCCTCCTGCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 72 bp CCCACTCTGGTACCACCTCCTCCGCCGCCGCGGGGCTaGCCCTGTCACGAGGTGCTGGCTCCTGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: PTLVPPPPPPRG*PCHEVLAPAGS
Trigger: ACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCAGCCCCGCGGCGGCGGAGGAGGTGGTACCAGAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp GCCGACCGCGGGGAGGCGCTCTTGCGCCGGGCCGCATaGATGATGTTTCGCGCCAGAAGCGCCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: ADRGEALLRRAA*MMFRARSACSW
Trigger: CCAGCTGCAGGCGCTTCTGGCGCGAAACATCATCAATGCGGCCCGGCGCAAGAGCGCCTCCCCGCGGTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS TCA 72 bp GAGGGCCTGGCTCCGGCAGCGAGGTGGAACTCAGGCTaGGCCCCGGTGCATGGCCTGGGAGGCTTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: EGLAPAARWNSG*APVHGLGGLKG
Trigger: TCCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAGCCTGAGTTCCACCTCGCTGCCGGAGCCAGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 72 bp TGCGGCTGCCCCGGCGGGCCATCGACTCCTCCAGAATaGCCGTCTTGCTGGCAGGAACCGCCTGGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: CGCPGGPSTPPE*PSCWQEPPGPS
Trigger: TGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGGGCAGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp GGGGCGCAGCTGGTATGGCGGCTGCTTGGTGGGCTCTaGGCGCAGGACCCCGTTCTCAGGCAGGTAGCCATG +
Preference number: 6 (lower is better)
Translates to: GAQLVWRLLGGL*AQDPVLRQVAM
Trigger: CATGGCTACCTGCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp AGAGCGAGGGGCGCAGCTGGTATGGCGGCTGCTTGGTaGGCTCTGGGCGCAGGACCCCGTTCTCAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: RARGAAGMAAAW*ALGAGPRSQAG
Trigger: ACCTGCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp TGGCCCTGTCACGAGGTGCTGGCTCCTGCTGGAAGTTaGAGGCCTCGGCCCCCAGTGCGAAGGGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: WPCHEVLAPAGS*RPRPPVRRAPP
Trigger: AGGAGGAGCCCTTCGCACTGGGGGCCGAGGCCTCCAACTTCCAGCAGGAGCCAGCACCTCGTGACAGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CAAAGAGCGAGGGGCGCAGCTGGTATGGCGGCTGCTTaGTGGGCTCTGGGCGCAGGACCCCGTTCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: QRARGAAGMAAA*WALGAGPRSQA
Trigger: TGCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CCCCCTTGGGCAGGTTGGGCACCAGGTCCAAGGAGCTaGGCTTGGCGGGCGAGGCAGCTCTTGGTGAGACCT +
Preference number: 6 (lower is better)
Translates to: PPWAGWAPGPRS*AWRARQLLVRP
Trigger: AGGTCTCACCAAGAGCTGCCTCGCCCGCCAAGCCCAGCTCCTTGGACCTGGTGCCCAACCTGCCCAAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp ACAAAGAGCGAGGGGCGCAGCTGGTATGGCGGCTGCTaGGTGGGCTCTGGGCGCAGGACCCCGTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: TKSEGRSWYGGC*VGSGRRTPFSG
Trigger: GCCTGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp GCTAGTGCTCCGGCCCAACGTCTGCTAGGTCCTCCCTaGAGCCAAGCTTCCCCCTGGATGCTCCTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ASAPAQRLLGPP*SQASPWMLLPA
Trigger: GGCCGGCAGGAGCATCCAGGGGGAAGCTTGGCTTCAGGGAGGACCTAGCAGACGTTGGGCCGGAGCACTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS GCA 72 bp AGGACAAAGAGCGAGGGGCGCAGCTGGTATGGCGGCTaGTTGGTGGGCTCTGGGCGCAGGACCCCGTTCTCA +
Preference number: 6 (lower is better)
Translates to: RTKSEGRSWYGG*LVGSGRRTPFS
Trigger: TGAGAACGGGGTCCTGCGCCCAGAGCCCACCAAGCAGCCGCCATACCAGCTGCGCCCCTCGCTCTTTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp GGGCTCCTCTCCATCTGGCTGGTGCCCCCTGGCGCCTaGATCCCAAAAGGCCTGGCCGTCCTGTTGACCACT +
Preference number: 6 (lower is better)
Translates to: GLLSIWLVPPGA*IPKGLAVLLTT
Trigger: AGTGGTCAACAGGACGGCCAGGCCTTTTGGGATCCAGGCGCCAGGGGGCACCAGCCAGATGGAGAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp ACTCAGGCTGAGCCCCGGTGCATGGCCTGGGAGGCTTaGAGGGAGCACTCTGAGGGACTCCTGGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: TQAEPRCMAWEA*REHSEGLLAGL
Trigger: AAGCCCAGCCAGGAGTCCCTCAGAGTGCTCCCTTCAAGCCTCCCAGGCCATGCACCGGGGCTCAGCCTGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 72 bp CCCGGCGGGCCATCGACTCCTCCAGAATGCCCGTCTTaGTGGCAGGAACCGCCTGGCCCTTCAGATGAGAAG +
Preference number: 6 (lower is better)
Translates to: PGGPSTPPECPS*WQEPPGPSDEK
Trigger: CTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CTGGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGTaGTTGGATGCCCAGGGCTTTGGGCAGCTGCGGTGT +
Preference number: 6 (lower is better)
Translates to: LGRPLFLSGAAG*LDAQGFGQLRC
Trigger: ACACCGCAGCTGCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CAA 72 bp TCTCTGGAGCAGCTGGGTGGTTGGATGCCCAGGGCTTaGGGCAGCTGCGGTGTCCCCTGGGTGACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLEQLGGWMPRA*GSCGVPWVTLQ
Trigger: CTGCAGAGTCACCCAGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CAA 90 bp CTGGGAGGGGTGGTCAGCTGGGCTGCAATCTGCTGGCTCCGCGCCTaGGCTTCTTTCAGATCCTTCTCCGTGAGGCTAGTGCTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: LGGVVSWAAICWLRA*ASFRSFSVRLVLRP
Trigger: GGGCCGGAGCACTAGCCTCACGGAGAAGGATCTGAAAGAAGCCAAGGCGCGGAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp TTCACCCTCTGCCGGCGCCTGTTGAAGAGCTGGACGCCACGGGAATaGGAGCTGGGAGGGGTGGTCAGCTGGGCTGCAATCTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: FTLCRRLLKSWTPRE*ELGGVVSWAAICWL
Trigger: GAGCCAGCAGATTGCAGCCCAGCTGACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp CCGTGGCTCTCCAAGGTGAACTCGTTCACCCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGGGAATTGGAGCTGGGAGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: PWLSKVNSFTLCRRL*KSWTPRELELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp CCTTGTTCCTCTCTGGAGCAGCTGGGTGGTTGGATGCCCAGGGCTTaGGGCAGCTGCGGTGTCCCCTGGGTGACTCTGCAGGCAGAGTCG +
Preference number: 6 (lower is better)
Translates to: PCSSLEQLGGWMPRA*GSCGVPWVTLQAES
Trigger: CGACTCTGCCTGCAGAGTCACCCAGGGGACACCGCAGCTGCCCAAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS TCA 72 bp CACCTTCTCCAGGTGCCGCAGCAAGCTAGCCTCCTCTaGGTACCCCTCCATGCTGTGGCCAGGGACCCCTCT +
Preference number: 6 (lower is better)
Translates to: HLLQVPQQASLL*VPLHAVARDPS
Trigger: AGAGGGGTCCCTGGCCACAGCATGGAGGGGTACTCAGAGGAGGCTAGCTTGCTGCGGCACCTGGAGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 72 bp TGGCCGTGGCTCTCCAAGGTGAACTCGTTCACCCTCTaGCGGCGCCTGTTGAAGAGCTGGACGCCACGGGAA +
Preference number: 6 (lower is better)
Translates to: WPWLSKVNSFTL*RRLLKSWTPRE
Trigger: TTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTTCACCTTGGAGAGCCACGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp AACTCGTTCACCCTCTGCCGGCGCCTGTTGAAGAGCTaGACGCCACGGGAATTGGAGCTGGGAGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: NSFTLCRRLLKS*TPRELELGGVV
Trigger: GACCACCCCTCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CCGGGCTTCGCTGCCCCATCATCCTCCTTTCCACCATaGGGCTGCGGGACATTATGTGTCTCTGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: PGFAAPSSSFPP*GCGTLCVSVAG
Trigger: CCCGGCCACAGAGACACATAATGTCCCGCAGCCCCATGGTGGAAAGGAGGATGATGGGGCAGCGAAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CCACCCGCGGGGACAGATATTGTAGCCCAGGATGCCTaGAGACTTAGCCCCGGAGTCCTCGGAGTCGAGGGA +
Preference number: 6 (lower is better)
Translates to: PPAGTDIVAQDA*RLSPGVLGVEG
Trigger: TCCCTCGACTCCGAGGACTCCGGGGCTAAGTCTCCAGGCATCCTGGGCTACAATATCTGTCCCCGCGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307662.5
CDS CCA 72 bp ACTACATCCCAGTCCTGGCTGGCCCTGTCGTCGTGCTaGGACGCCCCTTGTTCCTCTCTGGAGCAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: TTSQSWLALSSC*DAPCSSLEQLG
Trigger: ACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 72 bp TCATCTGCCCGGCCTTCACTACATCCCAGTCCTGGCTaGCCCTGTCGTCGTGCTGGGACGCCCCTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: SSARPSLHPSPG*PCRRAGTPLVP
Trigger: AGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAAGGCCGGGCAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 72 bp GTCATCATCTGCCCGGCCTTCACTACATCCCAGTCCTaGCTGGCCCTGTCGTCGTGCTGGGACGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: VIICPAFTTSQS*LALSSCWDAPC
Trigger: ACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAAGGCCGGGCAGATGATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CAA 72 bp CCTGGCGCCTGGATCCCAAAAGGCCTGGCCGTCCTGTaGACCACTGATGGGGGCTTGGCCAGTGTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: PGAWIPKGLAVL*TTDGGLASVKW
Trigger: CCACTTCACACTGGCCAAGCCCCCATCAGTGGTCAACAGGACGGCCAGGCCTTTTGGGATCCAGGCGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp CCCTTCCCAGAGGCCTCGGAGAGGTTCTGGTTGGGTTaGGGCTTCGGCTTGGCCTGGATGCGGGGTGACTTG +
Preference number: 6 (lower is better)
Translates to: PFPEASERFWLG*GFGLAWMRGDL
Trigger: CAAGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGAGGCCTCTGGGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp AGCTCAGCTCCCTTCCCAGAGGCCTCGGAGAGGTTCTGGTTGGGTTaGGGCTTCGGCTTGGCCTGGATGCGGGGTGACTTGAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SSAPFPEASERFWLG*GFGLAWMRGDLRQE
Trigger: CTCCTGCCTCAAGTCACCCCGCATCCAGGCCAAGCCGAAGCCCAAACCCAACCAGAACCTCTCCGAGGCCTCTGGGAAGGGAGCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp TACATCCCAGTCCTGGCTGGCCCTGTCGTCGTGCTGGGACGCCCCTaGTTCCTCTCTGGAGCAGCTGGGTGGTTGGATGCCCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: YIPVLAGPVVVLGRP*FLSGAAGWLDAQGF
Trigger: AAAGCCCTGGGCATCCAACCACCCAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS GCA 72 bp GTCCTCCCTGAAGCCAAGCTTCCCCCTGGATGCTCCTaGCGGCCTTCAAGCCTTGGTTCTCAAAGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: VLPEAKLPPGCS*RPSSLGSQSLR
Trigger: CCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGGCAGGAGCATCCAGGGGGAAGCTTGGCTTCAGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS GCA 72 bp GTGCTGCATCTCACCTCCTCAGCCGGTGCCTGGGGTTaGCCATCAGCACACAGGGTGCTGGGTTTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VLHLTSSAGAWG*PSAHRVLGLEA
Trigger: TGCTTCCAAACCCAGCACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTGAGATGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS GCA 72 bp TTCACTACATCCCAGTCCTGGCTGGCCCTGTCGTCGTaGTGGGACGCCCCTTGTTCCTCTCTGGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: FTTSQSWLALSS*WDAPCSSLEQL
Trigger: CAGCTGCTCCAGAGAGGAACAAGGGGCGTCCCAGCACGACGACAGGGCCAGCCAGGACTGGGATGTAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CCA 72 bp GGCGGGCCATCGACTCCTCCAGAATGCCCGTCTTGCTaGCAGGAACCGCCTGGCCCTTCAGATGAGAAGACT +
Preference number: 6 (lower is better)
Translates to: GGPSTPPECPSC*QEPPGPSDEKT
Trigger: AGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGGCATTCTGGAGGAGTCGATGGCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp ATCGGTGGCTGGCGGATTGTGGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACTGGCCGCGTCCGTCAG +
Preference number: 6 (lower is better)
Translates to: IGGWRIVAAVRS*CGERGTGRVRQ
Trigger: CTGACGGACGCGGCCAGTGCCACGCTCACCACACCAACTTCTAACAGCAGCCACAATCCGCCAGCCACCGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518872.1
CDS CAA 72 bp TGTGCTGCATCTCACCTCCTCAGCCGGTGCCTGGGGTaGCCCATCAGCACACAGGGTGCTGGGTTTGGAAGC +
Preference number: 6 (lower is better)
Translates to: CAASHLLSRCLG*PISTQGAGFGS
Trigger: GCTTCCAAACCCAGCACCCTGTGTGCTGATGGGCAACCCCAGGCACCGGCTGAGGAGGTGAGATGCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp GGATTCGGGGTCACCTTGGGCTTCTCCACGAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCCATCGACTCCTCCAGAATGCCCGTC +
Preference number: 6 (lower is better)
Translates to: GFGVTLGFSTKVNMD*RLPRRAIDSSRMPV
Trigger: GACGGGCATTCTGGAGGAGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp GGCAGGCTCTGTGGGACAACAGTTGCCGGTGGGTTCTaGTTGACATCGGTGGCTGGCGGATTGTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRLCGTTVAGGF*LTSVAGGLWLL
Trigger: CAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAGAGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp CCCGTCTTGCTGGCAGGAACCGCCTGGCCCTTCAGATaGGAAGACTTGGGGTCGGAGCTGGGATACAGGACA +
Preference number: 6 (lower is better)
Translates to: PVLLAGTAWPFR*EDLGSELGYRT
Trigger: TGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCAGCAAGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp AGCGGGCCAGCTCTGGCGTGTGGCTTGAAGACTCGATaGCATATTTCTCCATCCGTGACTGGCGGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: SGPALACGLKTR*HISPSVTGGGR
Trigger: ACGCCCGCCGCCAGTCACGGATGGAGAAATATGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGCCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS GCA 72 bp GGTGAGGACTGCTGGGCCTCTCGGTTTTGGGACAGGTaGAGCCCATTGGCTGTCAGCAGTGCTGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: GEDCWASRFWDR*SPLAVSSAAFS
Trigger: GGAGAATGCAGCACTGCTGACAGCCAATGGGCTGCACCTGTCCCAAAACCGAGAGGCCCAGCAGTCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp TCCAAGGTGAACTCGTTCACCCTCTGCCGGCGCCTGTaGAAGAGCTGGACGCCACGGGAATTGGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: SKVNSFTLCRRL*KSWTPRELELG
Trigger: TCCCAGCTCCAATTCCCGTGGCGTCCAGCTCTTCAACAGGCGCCGGCAGAGGGTGAACGAGTTCACCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp TTGACCGGCAGTGGGACCCCCGTGGGGTTCGTTACTTaGAGCAGAAGGAAGGCTTCCACACCTGAGCCTCGA +
Preference number: 6 (lower is better)
Translates to: LTGSGTPVGFVT*SRRKASTPEPR
Trigger: TCGAGGCTCAGGTGTGGAAGCCTTCCTTCTGCTTCAAGTAACGAACCCCACGGGGGTCCCACTGCCGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp ATCGGTGGCTGGCGGATTGTGGCTGCTGTTAGAAGTTaGTGTGGTGAGCGTGGCACTGGGCGAGGCAAGGTT +
Preference number: 6 (lower is better)
Translates to: IGGWRIVAAVRS*CGERGTGRGKV
Trigger: AACCTTGCCTCGCCCAGTGCCACGCTCACCACACCAACTTCTAACAGCAGCCACAATCCGCCAGCCACCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp AGCTTCCCCCTGGATGCTCCTGCCGGCCTTCAAGCCTaGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTG +
Preference number: 6 (lower is better)
Translates to: SFPLDAPAGLQA*VLKASGKGSQL
Trigger: CAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCAAGGCTTGAAGGCCGGCAGGAGCATCCAGGGGGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS CAA 72 bp GTCACCTTGGGCTTCTCCACGAAAGTAAACATGGATTaGCGGCTGCCCCGGCGGGCCATCGACTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: VTLGFSTKVNMD*RLPRRAIDSSR
Trigger: TCTGGAGGAGTCGATGGCCCGCCGGGGCAGCCGCAAATCCATGTTTACTTTCGTGGAGAAGCCCAAGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CAA 90 bp GTTAGAAGTTGGTGTGGTGAGCGTGGCACTGGGCGAGGCAAGGTTTaGGTTGACATCTGCAGCTGGGCTGTGGACCTCAGCTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VRSWCGERGTGRGKV*VDICSWAVDLSWRW
Trigger: CCACCTCCAGCTGAGGTCCACAGCCCAGCTGCAGATGTCAACCAAAACCTTGCCTCGCCCAGTGCCACGCTCACCACACCAACTTCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp GGACCTCCAATCCCTCTTCTTAACCCGTCTCTGGTGTaGGGCCGCTTTGGGGCAATCTGTAGCCGGACACCA +
Preference number: 6 (lower is better)
Translates to: GPPIPLLNPSLV*GRFGAICSRTP
Trigger: TGGTGTCCGGCTACAGATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CCA 72 bp GTGGTGGACCTCCAATCCCTCTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGGCAATCTGTAGCCGGA +
Preference number: 6 (lower is better)
Translates to: VVDLQSLFLTRL*CEAALGQSVAG
Trigger: TCCGGCTACAGATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394243.5
CDS CAA 90 bp TCCGCTGTCTGTACCAGATCCAGCAAGTCTGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTAAACATGGATTTGCGGCTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SAVCTRSSKSGFGVT*GFSTKVNMDLRLPR
Trigger: CCGGGGCAGCCGCAAATCCATGTTTACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTGGTACAGACAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp GTTCGTTACTTGAAGCAGAAGGAAGGCTTCCACACCTaGGCCTCGATCCCGGCGTTCCGGGTAGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: VRYLKQKEGFHT*ASIPAFRVEKE
Trigger: CTCCTTCTCTACCCGGAACGCCGGGATCGAGGCTCAGGTGTGGAAGCCTTCCTTCTGCTTCAAGTAACGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp TGGCAGGAACCGCCTGGCCCTTCAGATGAGAAGACTTaGGGTCGGAGCTGGGATACAGGACAGAATATGAGG +
Preference number: 6 (lower is better)
Translates to: WQEPPGPSDEKT*GRSWDTGQNMR
Trigger: CCTCATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGGCGGTTCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS TCA 72 bp CTCAAAGCCTCCGGCAAAGGCAGCCAATTGCTTGGCTaGCGAAGCCAGGAAAATCCCACATCGGCAGCAACA +
Preference number: 6 (lower is better)
Translates to: LKASGKGSQLLG*RSQENPTSAAT
Trigger: TGTTGCTGCCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS TCA 72 bp GGACCTCCAATCCCTCTTCTTAACCCGTCTCTGGTGTaGGGCCGCTTTGGGGCAATACCACAGGAATCACAG +
Preference number: 6 (lower is better)
Translates to: GPPIPLLNPSLV*GRFGAIPQESQ
Trigger: CTGTGATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS GCA 72 bp CCTTGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTaGTTGGCTGACGAAGCCAGGAAAATCCCACATCGG +
Preference number: 6 (lower is better)
Translates to: PWFSKPPAKAAN*LADEARKIPHR
Trigger: CCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS CCA 72 bp CCTGGCCCTTCAGATGAGAAGACTTGGGGTCGGAGCTaGGATACAGGACAGAATATGAGGGAGGAGACCTCA +
Preference number: 6 (lower is better)
Translates to: PGPSDEKTWGRS*DTGQNMREETS
Trigger: TGAGGTCTCCTCCCTCATATTCTGTCCTGTATCCCAGCTCCGACCCCAAGTCTTCTCATCTGAAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp ATGGTAGGTGATGGGCAGCGGGCCAGCTCTGGCGTGTaGCTTGAAGACTCGATGACATATTTCTCCATCCGT +
Preference number: 6 (lower is better)
Translates to: MVGDGQRASSGV*LEDSMTYFSIR
Trigger: ACGGATGGAGAAATATGTCATCGAGTCTTCAAGCCACACGCCAGAGCTGGCCCGCTGCCCATCACCTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp GTGGTGGACCTCCAATCCCTCTTCTTAACCCGTCTCTaGTGTGAGGCCGCTTTGGGGCAATACCACAGGAAT +
Preference number: 6 (lower is better)
Translates to: VVDLQSLFLTRL*CEAALGQYHRN
Trigger: ATTCCTGTGGTATTGCCCCAAAGCGGCCTCACACCAGAGACGGGTTAAGAAGAGGGATTGGAGGTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522122.1
CDS CAA 72 bp TGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTGCTaGGCTGACGAAGCCAGGAAAATCCCACATCGGCAG +
Preference number: 6 (lower is better)
Translates to: WFSKPPAKAANC*ADEARKIPHRQ
Trigger: CTGCCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS CCA 72 bp AACAGTTGCCGGTGGGTTCTGATTGACATCGGTGGCTaGCGGATTGTGGCTGCTGTTAGAAGTTGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: NSCRWVLIDIGG*RIVAAVRSWCG
Trigger: ACCACACCAACTTCTAACAGCAGCCACAATCCGCCAGCCACCGATGTCAATCAGAACCCACCGGCAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CTTCTCATCCGCTGTCTGTACCAGATCCAGCAAGTCTaGATTCGGGGTCACCTTGGGCTTCTCCACGAAAGT +
Preference number: 6 (lower is better)
Translates to: LLIRCLYQIQQV*IRGHLGLLHES
Trigger: ACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTGGTACAGACAGCGGATGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp CCTTCCTCCGCTGATTCACAGAATTGGGGTGAGGTCTaGCTGAGACGAAAGATAAGTCCTTCCTGGGCTAGT +
Preference number: 6 (lower is better)
Translates to: PSSADSQNWGEV*LRRKISPSWAS
Trigger: ACTAGCCCAGGAAGGACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATTCTGTGAATCAGCGGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1
CDS CAA 90 bp TTCAAGCCTTGGTTCTCAAAGCCTCCGGCAAAGGCAGCCAATTGCTaGGCTGACGAAGCCAGGAAAATCCCACATCGGCAGCAACATGAA +
Preference number: 6 (lower is better)
Translates to: FKPWFSKPPAKAANC*ADEARKIPHRQQHE
Trigger: TTCATGTTGCTGCCGATGTGGGATTTTCCTGGCTTCGTCAGCCAAGCAATTGGCTGCCTTTGCCGGAGGCTTTGAGAACCAAGGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307662.5
ENST00000519664.1
CDS CCA 72 bp GGAATTCTGTTGGATGCTAGAAAGTGGCAGGCTCTGTaGGACAACAGTTGCCGGTGGGTTCTGATTGACATC +
Preference number: 6 (lower is better)
Translates to: GILLDARKWQAL*DNSCRWVLIDI
Trigger: GATGTCAATCAGAACCCACCGGCAACTGTTGTCCCACAGAGCCTGCCACTTTCTAGCATCCAACAGAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000518872.1
ENST00000519664.1
ENST00000522122.1
CDS CAA 72 bp TGTACCAGATCCAGCAAGTCTGGATTCGGGGTCACCTaGGGCTTCTCCACGAAAGTAAACATGGATTTGCGG +
Preference number: 6 (lower is better)
Translates to: CTRSSKSGFGVT*GFSTKVNMDLR
Trigger: CCGCAAATCCATGTTTACTTTCGTGGAGAAGCCCAAGGTGACCCCGAATCCAGACTTGCTGGATCTGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307662.5
ENST00000394243.5
ENST00000519664.1
ENST00000522122.1
CDS CCA 72 bp TCTGCACTTTTGCCTTCCTCCGCTGATTCACAGAATTaGGGTGAGGTCTGGCTGAGACGAAAGATAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SALLPSSADSQN*GEVWLRRKISP
Trigger: AGGACTTATCTTTCGTCTCAGCCAGACCTCACCCCAATTCTGTGAATCAGCGGAGGAAGGCAAAAGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394243.5
ENST00000522122.1