RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNM (Homo sapiens)

Ensembl gene IDs: ENSG00000182253

Ensembl transcript IDs: ENST00000328642.11, ENST00000336292.11, ENST00000560674.5, ENST00000594047.2

Found 928 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTACCTGCGGTAGCCACTCCCAGGACCTGGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAGGTGAATCTGAGAGGGAAGACCCTC +
Preference number: 1 (lower is better)
Translates to: TTCGSHSQDLGRRAP*GSEGLQVNLRGKTL
Trigger: GAGGGTCTTCCCTCTCAGATTCACCTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGCTACCGCAGGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 90 bp GGCCTGGTCTCCTTCCCCAGCAGAGGCCTTAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTC +
Preference number: 1 (lower is better)
Translates to: GLVSFPSRGLKAHTN*LVIPTVRVSPGTTV
Trigger: GACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCCTCTGCTGGGGAAGGAGACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR CCA 90 bp TGGTCTCCTTCCCCAGCAGAGGCCTTAAAGCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTCAGAC +
Preference number: 1 (lower is better)
Translates to: WSPSPAEALKLTPTA*SFLLSASLQEPRSD
Trigger: GTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCCTCTGCTGGGGAAGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR GCA 90 bp TGGTCTACCATTCTCTGGAGCTGCACCTTCTTATCAAACATGGCCTaGTCCTTGCCCTGTTCTCTGTGGGCCTGGTCTCCTTCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: WSTILWSCTFLSNMA*SLPCSLWAWSPSPA
Trigger: TGCTGGGGAAGGAGACCAGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR GCA 90 bp GTAGCCTGGCTGAGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATGATGCTGTGTTACTGGAAATACAGC +
Preference number: 1 (lower is better)
Translates to: VAWLRVVLAQTVIPQ*ATVSAMMLCYWKYS
Trigger: GCTGTATTTCCAGTAACACAGCATCATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCTCAGCCAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 90 bp GCACAGTCCACTGTGTGCTTCCAATTTTCCTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTC +
Preference number: 1 (lower is better)
Translates to: AQSTVCFQFSCTQPA*RSSCSLSIGILFIV
Trigger: GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 90 bp GAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGCGGTAGCCACTCCCAGGACCTGGGG +
Preference number: 1 (lower is better)
Translates to: ESCAAFLLHLSMKKT*SPETTCGSHSQDLG
Trigger: CCCCAGGTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 90 bp GGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTGGAAATACAGCTGAGACAGCATTAT +
Preference number: 1 (lower is better)
Translates to: GGASSDCYSPVRHSQ*DDAVLLEIQLRQHY
Trigger: ATAATGCTGTCTCAGCTGTATTTCCAGTAACACAGCATCATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATaGAGGGTTGGGAAAGGCATCTTTAAGAGGCACAGTCCACTGTGT +
Preference number: 1 (lower is better)
Translates to: IHLSPLSSERPASHE*RVGKGIFKRHSPLC
Trigger: ACACAGTGGACTGTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR TCA 90 bp AATCATCTACCCTACCAGTGCCAGGGAACCTGTGCAAATAGAATGTaGAATATCACAACAGACTACAGCTGTCCTCGCCATAAATACTAT +
Preference number: 1 (lower is better)
Translates to: NHLPYQCQGTCANRM*NITTDYSCPRHKYY
Trigger: ATAGTATTTATGGCGAGGACAGCTGTAGTCTGTTGTGATATTTCACATTCTATTTGCACAGGTTCCCTGGCACTGGTAGGGTAGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR TCA 90 bp TTAGAAACGACAAAACCTTACAAAGCAGTCACCTCCATACCAGTCTaGCAATCACTAGTTCATTTGGCAGATGGACAACAAAGGTTTAAA +
Preference number: 1 (lower is better)
Translates to: LETTKPYKAVTSIPV*QSLVHLADGQQRFK
Trigger: TTTAAACCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTGTCAGACTGGTATGGAGGTGACTGCTTTGTAAGGTTTTGTCGTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPCTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGGTCCAGCTGCAGTCTaGGTATCGGCATTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAGPAAV*VSAFSS
Trigger: TGAAGAGAATGCCGATACTCAGACTGCAGCTGGACC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGGTCCAGCTGCAGTCTaGGTATCGGCATTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPGPAAV*VSAFSS
Trigger: TGAAGAGAATGCCGATACTCAGACTGCAGCTGGACC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCATCTACCCTACCAGTaGCAGGGAACCTGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAHLPYQ*QGTCAN
Trigger: ATTTGCACAGGTTCCCTGGCACTGGTAGGGTAGATG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSCTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 2 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTTLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 2 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGANYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 2 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTGGTCTACCATTCTCTaGAGCTGCACCTTCTTATCA +
Preference number: 2 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPWSTIL*SCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR CCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCG +
Preference number: 2 (lower is better)
Translates to: QPACRSSCSLSIGILFIVLTPTA*SFLLSA
Trigger: CGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR TCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTTTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 2 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCACAAAACACCCCAACTaGAATGACTTCTGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPTKHPN*NDFCSK
Trigger: CTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGT...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAATGTTCTCTGTGGGCCTaGTCTCCTTCCCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKCSLWA*SPSPAE
Trigger: CTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACA...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 2 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTC +
Preference number: 2 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMKAHTN*LVIPTV
Trigger: GACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATAAGGCCTTTGGATGTTaGCACGTCGCCAACAGGCTG +
Preference number: 2 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYKAFGC*HVANRL
Trigger: CAGCCTGTTGGCGACGTGCCAACATCCAAAGGCCTT...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: QPACRSSCSLSIGILFIVQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CAA 90 bp GGCACAGTCCACTGTGTGCTTCCAATTTTCCTGTACACAGCCAGCTaGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGT +
Preference number: 2 (lower is better)
Translates to: GTVHCVLPIFLYTAS*PVQLQSEYRHSLHC
Trigger: ACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACAGGAAAATTGGAAGCACACAGTGGACTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCTLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 2 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTRRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATCTCCAGAAACTACCTaGGGTAGCCACTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSSPETT*GSHSQD
Trigger: GTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATGGGTATCTCGGTGCTaGGCTGCAGGAGAGATATCC +
Preference number: 2 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSWVSRC*AAGEIS
Trigger: GGATATCTCTCCTGCAGCCCAGCACCGAGATACCCA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTG +
Preference number: 2 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSVRHSQ*DDAVLL
Trigger: CAGTAACACAGCATCATCGCACTGACTGTGGCGCAC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCATCTACCCTACCAGTaGCAGGGAACCTGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSHLPYQ*QGTCAN
Trigger: ATTTGCACAGGTTCCCTGGCACTGGTAGGGTAGATG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 2 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACCCCCAGGCCCGTCCTaGGTATCTCGGTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: EVGHNINYLFTSASIYKSPPGPS*VSRCWA
Trigger: AGCCCAGCACCGAGATACCCAGGACGGGCCTGGGGG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTACATGGCCTGCTCCTTaGCCTGTTCTCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: HILVTFPIVGNRSLAKSATWPAP*PVLCGP
Trigger: AGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 2 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 2 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSEITDL*STILWS
Trigger: GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR CCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: CIHLSPLSSERPASHEWRQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 2 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: SHCREQEFSKISFLDDVICTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 2 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 2 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTSMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGCTGTCGTTGTAGCCTaGCTGAGGGTGGTGCTAGCT +
Preference number: 2 (lower is better)
Translates to: SHCREQEFSKISFLDDVIAVVVA*LRVVLA
Trigger: AGCTAGCACCACCCTCAGCCAGGCTACAACGACAGC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCCACAGTCAGTGCGATaGTGCTGTGTTACTGGAAAT +
Preference number: 2 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKPQSVR*CCVTGN
Trigger: ATTTCCAGTAACACAGCATCATCGCACTGACTGTGG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 2 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKRRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAACCATTCTCTGGAGCTaGACCTTCTTATCAAACATG +
Preference number: 2 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSTILWS*TFLSNM
Trigger: CATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 2 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAATCTCGGTGCTGGGCTaGAGGAGAGATATCCAGTTC +
Preference number: 2 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGISVLG*RRDIQF
Trigger: GAACTGGATATCTCTCCTGCAGCCCAGCACCGAGAT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTG +
Preference number: 2 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGVRHSQ*DDAVLL
Trigger: CAGTAACACAGCATCATCGCACTGACTGTGGCGCAC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 2 (lower is better)
Translates to: IHLSPLSSERPASHEWRVNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGGTCCAGCTGCAGTCTaGGTATCGGCATTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SHCREQEFSKISFLDDVIGPAAV*VSAFSS
Trigger: TGAAGAGAATGCCGATACTCAGACTGCAGCTGGACC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTCCTCCACTTATCAATaGAGAAAACGTGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKSSTYQ*RKRALQ
Trigger: CTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGA...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 2 (lower is better)
Translates to: SHCREQEFSKISFLDDVIHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 2 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: EVGHNINYLFTSASIYKSGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VIILITCSHQLPFTSHEPKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 2 (lower is better)
Translates to: EVGHNINYLFTSASIYKSSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EVGHNINYLFTSASIYKSKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTACACTGACATCAAACTaGGCCCACTTAGACTCCTCA +
Preference number: 2 (lower is better)
Translates to: SHCREQEFSKISFLDDVITLTSN*AHLDSS
Trigger: TGAGGAGTCTAAGTGGGCTCAGTTTGATGTCAGTGT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 2 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTGCAAGCCATGTCTGTaGCCAGGTGCAAAACATAGA +
Preference number: 2 (lower is better)
Translates to: VIILITCSHQLPFTSHEPCKPCL*PGAKHR
Trigger: TCTATGTTTTGCACCTGGTCACAGACATGGCTTGCA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAACAAAACACCCCAACTaGAATGACTTCTGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKTKHPN*NDFCSK
Trigger: CTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 2 (lower is better)
Translates to: HILVTFPIVGNRSLAKSASMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 2 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAATAAACTGTTTCCCTaGACAAAACACCCCAACTGC +
Preference number: 2 (lower is better)
Translates to: HILVTFPIVGNRSLAKSANKLFP*TKHPNC
Trigger: GCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTATT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 2 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCACAAAACACCCCAACTaGAATGACTTCTGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCTKHPN*NDFCSK
Trigger: CTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 2 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 2 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CCA 72 bp GGTAGCCACTCCCAGGACCTGGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAGGTGAATCTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: GSHSQDLGRRAP*GSEGLQVNLRG
Trigger: CCCTCTCAGATTCACCTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CCA 72 bp CTCCAGAAACTACCTGCGGTAGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGGGGTCTGAGGGCCTCC +
Preference number: 3 (lower is better)
Translates to: LQKLPAVATPRT*GDVHPGGLRAS
Trigger: GGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CCA 72 bp TCCCCAGCAGAGGCCTTAAAGCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCGTCTCTCCAGGAACCA +
Preference number: 3 (lower is better)
Translates to: SPAEALKLTPTA*SFLLSASLQEP
Trigger: TGGTTCCTGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCCTCTGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR GCA 72 bp CTGAGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATGATGCTGTGTTACTGG +
Preference number: 3 (lower is better)
Translates to: LRVVLAQTVIPQ*ATVSAMMLCYW
Trigger: CCAGTAACACAGCATCATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 72 bp ATTCTCTGGAGCTGCACCTTCTTATCAAACATGGCCTaGTCCTTGCCCTGTTCTCTGTGGGCCTGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: ILWSCTFLSNMA*SLPCSLWAWSP
Trigger: AGGAGACCAGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR GCA 72 bp GAAATCACCGACCTTTGGTCTACCATTCTCTGGAGCTaGACCTTCTTATCAAACATGGCCTGCTCCTTGCCC +
Preference number: 3 (lower is better)
Translates to: EITDLWSTILWS*TFLSNMACSLP
Trigger: GGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR TCA 72 bp AGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATaGTGCTGTGTTACTGGAAATACAGCTGAGACAGCA +
Preference number: 3 (lower is better)
Translates to: RLLFPSAPQSVR*CCVTGNTAETA
Trigger: TGCTGTCTCAGCTGTATTTCCAGTAACACAGCATCATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 72 bp AGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTGGAAATACAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: SSDCYSPVRHSQ*DDAVLLEIQLR
Trigger: TCTCAGCTGTATTTCCAGTAACACAGCATCATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR GCA 72 bp GCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGCGGTAGCCACTCCCAG +
Preference number: 3 (lower is better)
Translates to: AAFLLHLSMKKT*SPETTCGSHSQ
Trigger: CTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR TCA 72 bp CCCTACCAGTGCCAGGGAACCTGTGCAAATAGAATGTaGAATATCACAACAGACTACAGCTGTCCTCGCCAT +
Preference number: 3 (lower is better)
Translates to: PYQCQGTCANRM*NITTDYSCPRH
Trigger: ATGGCGAGGACAGCTGTAGTCTGTTGTGATATTTCACATTCTATTTGCACAGGTTCCCTGGCACTGGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 3 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTCGGCATTCTCTTCATaGTCTTCAAGGTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: CIHLSPLSSERPASHEWRSAFSS*SSRSTS
Trigger: GGAGGTAGACCTTGAAGACAATGAAGAGAATGCCGA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAATTCATCTTTCACCCTaGAGCTCAGAAAGACCTGCA +
Preference number: 3 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSIHLSP*SSERPA
Trigger: TGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCCCATGAATGGAGGGTaGGGAAAGGCATCTTTAAGA +
Preference number: 3 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKPMNGG*GKASLR
Trigger: TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR CCA 72 bp AGGGCAACTTTCTTTTCATCTGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGCTGCACCTTCTTATCA +
Preference number: 3 (lower is better)
Translates to: RATFFSSEITDL*STILWSCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTCAGATGAAAAGAAAGTTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
3UTR-3UTR CAA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTCGGCATTCTCTTCATaGTCTTCAAGGTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSSAFSS*SSRSTS
Trigger: GGAGGTAGACCTTGAAGACAATGAAGAGAATGCCGA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTCGGCATTCTCTTCATaGTCTTCAAGGTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: SHCREQEFSKISFLDDVISAFSS*SSRSTS
Trigger: GGAGGTAGACCTTGAAGACAATGAAGAGAATGCCGA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACAGGAGGCTGTCACCTaGACCAAATTCTCACCAGTC +
Preference number: 3 (lower is better)
Translates to: EVGHNINYLFTSASIYKSQEAVT*TKFSPV
Trigger: GACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 3 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCEVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 3 (lower is better)
Translates to: SHCREQEFSKISFLDDVIQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGGTTCATGGTTGTTATaGTATTCATCTTTCACCCTT +
Preference number: 3 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASGSWLL*YSSFTL
Trigger: AAGGGTGAAAGATGAATACAATAACAACCATGAACC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 3 (lower is better)
Translates to: EVGHNINYLFTSASIYKSEVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
3UTR-3UTR CAA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGGTTCATGGTTGTTATaGTATTCATCTTTCACCCTT +
Preference number: 3 (lower is better)
Translates to: EVGHNINYLFTSASIYKSGSWLL*YSSFTL
Trigger: AAGGGTGAAAGATGAATACAATAACAACCATGAACC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCCTGCCCCTCTCTGGTaGGGGCGGACAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAPAPLW*GRTAPP
Trigger: GGGAGGAGCTGTCCGCCCTCACCAGAGAGGGGCAGG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGCATCTTGCCGGGCGTaGGGGGTTCTCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPASCRA*GVLAAG
Trigger: GCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCGCTGCTGCCGCAAGCTaGGCGCCTCCTCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ASLQEPRSDTPRAPASCVAAAAS*APPRRS
Trigger: GCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGC...GACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCCGCATCCAGGCGCTaGAGCTCCCGCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSASRR*SSRSSR
Trigger: GCGCGAGCTGCGGGAGCTGCAGCGCCTGGATGCGGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTGGAGTCTGCTCTCCTaGCCGCGCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPWSLLS*PRRSAS
Trigger: GGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCCCCCAGGCCCGTCCTaGGTATCTCGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAPPGPS*VSRCWA
Trigger: AGCCCAGCACCGAGATACCCAGGACGGGCCTGGGGG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTGGGCTGCCAGGCGCTaGGCTGCGTTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAWAARR*AALPAQ
Trigger: CTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCCGCTGTCCCGAGCTGTaGGAGGCCCCACCAGCAACC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPRCPEL*EAPPAT
Trigger: GGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAGCG...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGTCGGGCTCGCTGCCTaGCTTAGGTCACCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAVGLAA*LRSPPA
Trigger: TGCGGGAGGTGACCTAAGTCAGGCAGCGAGCCCGAC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCAGCTCGTCCAGCTGCTaGCGCAAGCTGCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSSSSC*RKLRAS
Trigger: GGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCT...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTAGCCGCGCGCGCAGCTaGTCCAACCCGAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSSRARS*SNPSAS
Trigger: CGAGGCGCTCGGGTTGGAGCAGCTGCGCGCGCGGCT...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTCTGGCGAGCCCCATaGCTCTGGACAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAFWRAP*LWTGRG
Trigger: GCCCCTGCCTGTCCAGAGGCATGGGGCTCGCCAGAA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCCATAGAGCCGGGCGTTaGGCTCCTGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPHRAGR*APGARP
Trigger: AGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATG...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTCGCCACCTCCAGACTaGGGCCGGTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGASPPPD*GRSSPA
Trigger: TGCAGGTGAAGACCGGCCTCAGTCTGGAGGTGGCGA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASLQEPRSDTPRAPASCVGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...GACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCTCAGCTCGTCCAGCTaGTGCCGCAAGCTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSLSSSS*CRKLRA
Trigger: GGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCACCCTGGACCTTCTTaGCATCCACGGAAACGCTCC +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAHPGPS*HPRKRS
Trigger: GGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCCCGTCATCTCTGTCGTaGCCCCCGGGGTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPPSSLS*PPGCSS
Trigger: AGATGAACACCCCGGGGGGCACGACAGAGATGACGG...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCCGGCTTCTCCCCGCTaGCATAACTCACGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSPASPR*HNSRAP
Trigger: AGGAGCCCGTGAGTTATGTCAGCGGGGAGAAGCCGG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCCTGCCCCTCTCTGGTaGGGGCGGACAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVPAPLW*GRTAPP
Trigger: GGGAGGAGCTGTCCGCCCTCACCAGAGAGGGGCAGG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GGCCTTAAAGCTCACACCAACTGCCTGGTCATTCCTACTGTCCGCGTCTCTCCAGCATCTTGCCGGGCGTaGGGGGTTCTCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLKAHTNCLVIPTVRVSPASCRA*GVLAAG
Trigger: GCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGC...TGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAGCTCGTCCAGCTGCTaGCGCAAGCTGCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSSSSC*RKLRAS
Trigger: GGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGCGCGGGCGCGGAAATaGATGGTAAGGCTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMARARK*MVRLAA
Trigger: CGCCGCCAGCCTTACCATGCATTTCCGCGCCCGCGC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCCTCCGCCTGGAGTCTaGTCTCCTGGCCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNPPPGV*SPGRAA
Trigger: TGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAGCGCCTCTGCCTCCTaGGCGCACAGCCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSASAS*AHSRVS
Trigger: AGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCACGTTGACGACCTTTaGTCTCCCCTCCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAHVDDL*SPLPPF
Trigger: AAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGCTCCTTGGAGGAGATaGCCTTCATGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAAPWRR*PSWRCG
Trigger: TCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCACAGCTCCTCCCTCATaGGCTCGGGAAGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPTAPPS*AREGFP
Trigger: AGGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGT...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GGCCTTAAAGCTCACACCAACTGCCTGGTCATTCCTACTGTCCGCGTCTCTCCATGGAGTCTGCTCTCCTaGCCGCGCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLKAHTNCLVIPTVRVSPWSLLS*PRRSAS
Trigger: GGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCA...TGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCCTCACAGACCGGCTaGCTCCGGTCGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVASQTG*LRSGSL
Trigger: CAGCGAGCCCGACCGGAGCCAGCCGGTCTGTGAGGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCGACCTCCTCCACTTTaGATGGGACGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGARPPPL*MGRKTP
Trigger: AGGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGCTGCTGCCGCAAGCTaGGCGCCTCCTCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYAAAAS*APPRRS
Trigger: GCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCTCAGCTCGTCCAGCTaGTGCCGCAAGCTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNLSSSS*CRKLRA
Trigger: GGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCTCGTCCTCGTACAGCTaGACCGTCTCCCGCCACGAC +
Preference number: 4 (lower is better)
Translates to: IPTVRVSPGTTVRHTESSSSSYS*TVSRHD
Trigger: GTCGTGGCGGGAGACGGTGCAGCTGTACGAGGACGA...GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGGCCCAATGCTGATGTaGCTGATGGATGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPGPMLM*LMDVLL
Trigger: GAGCAGCACATCCATCAGGCACATCAGCATTGGGCC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCGGGGTTCTCGCGGCTaGCCGGCTCCCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTRGSRG*PAPSCP
Trigger: AGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCCCCCAGGCCCGTCCTaGGTATCTCGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNPPGPS*VSRCWA
Trigger: AGCCCAGCACCGAGATACCCAGGACGGGCCTGGGGG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GGCCTTAAAGCTCACACCAACTGCCTGGTCATTCCTACTGTCCGCGTCTCTCCACATAGAGCCGGGCGTTaGGCTCCTGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GLKAHTNCLVIPTVRVSPHRAGR*APGARP
Trigger: AGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATG...TGGAGAGACGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTTAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCAGCCATGGCCAAGGTaGGGGTTGCCTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSQPWPR*GLPSHP
Trigger: AGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTACTCTGCTCGCCCTCTaGATCACCTGCCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSTLLAL*ITCLCH
Trigger: GTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGT...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGCTTGTTCTTTCCAGTaGGTGGAACCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSACSFQ*VEPRSP
Trigger: GGGGGACCTGGGTTCCACTCACTGGAAAGAACAAGC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGCCAGGACAGCATCTTaGCGGGCGTGCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNARTAS*RACGVL
Trigger: GAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTTCTCGGGGCCCGTCTaGAGCCGCCAGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVFSGPV*SRQDSI
Trigger: GATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATTCCTGCAGCTCGCGCTaGTGCGCACCCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYSCSSR*CAPSSA
Trigger: CGCCGAGCTGGGTGCGCAGCAGCGCGAGCTGCAGGA...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGGCCAAGGTGAGGGTTaGCTTCTCATCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSGQGEG*LLILQA
Trigger: TGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCTTCCTCATCTGGGCTaGCAGGCGCTGGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMLPHLG*QALGCV
Trigger: AACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGCTGAGCCCTCTCCGTaGACAGTGCTCTCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSAEPSP*TVLSES
Trigger: TGACTCAGAGAGCACTGTGCACGGAGAGGGCTCAGC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATCTCACGTCGCGTTCGTaGGCCGCGTCGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYLTSRS*AASRPR
Trigger: CCGAGGCCTCGACGCGGCCCACGAACGCGACGTGAG...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCTGGGTATCTCGGTGCTaGGCTGCAGGAGAGATATCC +
Preference number: 4 (lower is better)
Translates to: ASLQEPRSDTPRAPASCVWVSRC*AAGEIS
Trigger: GGATATCTCTCCTGCAGCCCAGCACCGAGATACCCA...GACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCAACCCCCAGGGGCCTaGCGACACATCTTCGACCTC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMQPPGA*RHIFDL
Trigger: GAGGTCGAAGATGTGTCGCCAGGCCCCTGGGGGTTG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCCACAGTGGCCGACACTaGGCCCTGGGGAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSHSGRH*ALGSAL
Trigger: CAGCGCACTCCCCAGGGCCCAGTGTCGGCCACTGTG...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTGCTGGGCCAGGTTCTaGCGAGCCCCATGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVCWARF*RAPCLW
Trigger: CCAGAGGCATGGGGCTCGCCAGAACCTGGCCCAGCA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCCACAGTCAGTGCGATaGTGCTGTGTTACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAPQSVR*CCVTGN
Trigger: ATTTCCAGTAACACAGCATCATCGCACTGACTGTGG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCCATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ASLQEPRSDTPRAPASCVHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...GACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCTCTGGAGACTGAGTaGACTGCTTCAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSLETE*TASGYW
Trigger: CCAGTATCCTGAAGCAGTTCACTCAGTCTCCAGAGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAACCTCGCTCTCGCCTaGAGGGATGTACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMNLALA*RDVQLP
Trigger: CGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGCATCTTGCCGGGCGTaGGGGGTTCTCGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHASCRA*GVLAAG
Trigger: GCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTCGTCCTCGTACAGCTaGACCGTCTCCCGCCACGAC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSSSYS*TVSRHD
Trigger: GTCGTGGCGGGAGACGGTGCAGCTGTACGAGGACGA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACCCTCCGCCTGGAGTCTaGTCTCCTGGCCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHPPPGV*SPGRAA
Trigger: TGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGG...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAAGCCGCGCGCGCAGCTaGTCCAACCCGAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSSRARS*SNPSAS
Trigger: CGAGGCGCTCGGGTTGGAGCAGCTGCGCGCGCGGCT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCGGTCTGTTTCTTTCTTaGTCCCTCGTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAGLFLS*SLVAFT
Trigger: AGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACC...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGTCATGGAATCGCCTTaGAGAGAACCAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPVMESP*REPVAS
Trigger: TGATGCCACTGGTTCTCTGCAAGGCGATTCCATGAC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCTGGGCCCTGGGGAGTaGGCTGTCCCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTLGPGE*AVPSCE
Trigger: CTCACAGCTCGGGACAGCGCACTCCCCAGGGCCCAG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCCCCCAGGCCCGTCCTaGGTATCTCGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTPPGPS*VSRCWA
Trigger: AGCCCAGCACCGAGATACCCAGGACGGGCCTGGGGG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCTGCCGGGGCTCCTTaGAGGAGATGCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVAAGAP*RRCPSW
Trigger: CCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTCCTGTCCACGTAAGTaGCTTTTGTGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGASCPRK*LLCLEK
Trigger: CTTTTCCAGACACAAAAGTCACTTACGTGGACAGGA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCCCGGCTTCTCCCCGCTaGCATAACTCACGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSPASPR*HNSRAP
Trigger: AGGAGCCCGTGAGTTATGTCAGCGGGGAGAAGCCGG...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTCCAGCACCTGTaGCTGGGCAAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNILQHL*LGKACG
Trigger: CCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGAT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGGCCAAGGTGAGGGTTaGCTTCTCATCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMGQGEG*LLILQA
Trigger: TGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPKAHTN*LVIPTV
Trigger: GACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTT...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCTTTCCGAAGCACCTaGTGCCACCTTGTCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVAFRST*CHLVSA
Trigger: CGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCTCCTTCGAGTCCCCTaGACGATTTCATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSLLRVP*TISSCQ
Trigger: TTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGGACCCAGCGTGACATaGCTCACAGACCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSGPSVT*LTDRLA
Trigger: AGCCAGCCGGTCTGTGAGGCATGTCACGCTGGGTCC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGGCTCCCTCCTGCCCTaGTCTTGTCCCGGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYGSLLP*SCPGLV
Trigger: GACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPEITDL*STILWS
Trigger: GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCTCCTCCACTTTGAATaGGACGGAAAACTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSLLHFE*DGKLLR
Trigger: CCGGAGGAGTTTTCCGTCCCATTCAAAGTGGAGGAG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGCCGACACTGGGCCCTaGGGAGTGCGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSADTGP*GVRCPE
Trigger: CTCGGGACAGCGCACTCCCCAGGGCCCAGTGTCGGC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTCCAGCACCTGTGACTaGGCAAAGCCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVSSTCD*AKPVGL
Trigger: CAGCCCCACAGGCTTTGCCCAGTCACAGGTGCTGGA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCTGCACTATCCTCCTaGGGAGATTCAGAAACGACA +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSALSS*GDSETT
Trigger: TGTCGTTTCTGAATCTCCCCAGGAGGATAGTGCAGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCCTGTCCACGTAAGTaGCTTTTGTGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSCPRK*LLCLEK
Trigger: CTTTTCCAGACACAAAAGTCACTTACGTGGACAGGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTGGTCCTTCGATGCTaGTTAACTGAGAATGTGACA +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGALVLRC*LTENVT
Trigger: TGTCACATTCTCAGTTAATCAGCATCGAAGGACCAA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCTTGTTCTTTCCAGTaGGTGGAACCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVACSFQ*VEPRSP
Trigger: GGGGGACCTGGGTTCCACTCACTGGAAAGAACAAGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCACCCTGGACCTTCTTaGCATCCACGGAAACGCTCC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNHPGPS*HPRKRS
Trigger: GGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGTGCACAGTGCTCTCTaGGTCACCAGATTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNVHSAL*VTRFPQ
Trigger: CTGGGGGAATCTGGTGACTCAGAGAGCACTGTGCAC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCTCAGCTCGTCCAGCTaGTGCCGCAAGCTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSLSSSS*CRKLRA
Trigger: GGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCTCGGCCACCAGCAGTaGGTAGCTGTCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTLGHQQ*VAVVHL
Trigger: GAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTAC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVLPVSG*GSPLRY
Trigger: GTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNCTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGASMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGCCTTCTCCTTCATCTaGTGGCTTTCTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSAFSFI*WLSLCL
Trigger: GAGACAGAGAGAAAGCCAGCAGATGAAGGAGAAGGC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACATGCCAGGCGCTGGGCTaGGTTGCCTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTCQALG*VACSGS
Trigger: AGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCA...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGATCACCAACCTTCCCTaGAGCAGAAATGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMITNLP*SRNGAL
Trigger: CAGGGCCCCATTTCTGCTGCAGGGAAGGTTGGTGAT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCGGGGTTCTCGCGGCTaGCCGGCTCCCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKRGSRG*PAPSCP
Trigger: AGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTGTTCTCTGTGGGCCTaGTCTCCTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVCSLWA*SPSPAE
Trigger: CTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGCTGTCGTTGTAGCCTaGCTGAGGGTGGTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNAVVVA*LRVVLA
Trigger: AGCTAGCACCACCCTCAGCCAGGCTACAACGACAGC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCTTGCAGAGAACCAGTaGCATCACTGGTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMLAENQ*HHWCPT
Trigger: GGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACAACCCCCAGGGGCCTaGCGACACATCTTCGACCTC +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKQPPGA*RHIFDL
Trigger: GAGGTCGAAGATGTGTCGCCAGGCCCCTGGGGGTTG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCTGCCACCAGCACCCTaGACCTTCTTGACATCCACG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVLPPAP*TFLTST
Trigger: CGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGAGCCCAGAATCACATaGAGCCCACCGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNEPRIT*SPPVRG
Trigger: ACCTCTGACCGGTGGGCTCCATGTGATTCTGGGCTC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560674.5
3UTR CAA 72 bp TGGAGCTGCACCTTCTTATCAAACATGGCCTGCTCCTaGCCCTGTTCTCTGTGGGCCTGGTCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WSCTFLSNMACS*PCSLWAWSPSP
Trigger: TGGGGAAGGAGACCAGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTCGCCACCTCCAGACTaGGGCCGGTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHSPPPD*GRSSPA
Trigger: TGCAGGTGAAGACCGGCCTCAGTCTGGAGGTGGCGA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSTLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCTGAAAAACACTCAGTaGGTACTGTTTTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGALKNTQ*VLFCLS
Trigger: ACTGAGACAAAACAGTACTCACTGAGTGTTTTTCAG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGACGGTCCTCTCATTTaGCCGTGTGCTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNDGPLI*PCAFRS
Trigger: GCTTCGGAAAGCACACGGTCAAATGAGAGGACCGTC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCACTGGTGCCCAACCTaGACCGTAGCTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNHWCPT*TVALLL
Trigger: AAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTCGATGCTGATTAACTaGGAATGTGACATCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPSMLIN*ECDIAF
Trigger: GAAAGCGATGTCACATTCTCAGTTAATCAGCATCGA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGATTCTCGGGGCCCGTCTaGAGCCGCCAGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRFSGPV*SRQDSI
Trigger: GATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAA...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GCAACTTTCTTTTCATCTGAAATCACCGACCTTTGGTCTACCATTCTCTGGAGCTCCGCATCCAGGCGCTaGAGCTCCCGCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: ATFFSSEITDLWSTILWSSASRR*SSRSSR
Trigger: GCGCGAGCTGCGGGAGCTGCAGCGCCTGGATGCGGA...GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTCAGATGAAAAGAAAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGATCTCGGTGCTGGGCTaGAGGAGAGATATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMISVLG*RRDIQF
Trigger: GAACTGGATATCTCTCCTGCAGCCCAGCACCGAGAT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTCTCCAGAAACTACCTaGGGTAGCCACTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVSPETT*GSHSQD
Trigger: GTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTCTCCAGAAACTACCTaGGGTAGCCACTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSPETT*GSHSQD
Trigger: GTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGGTCTGTTTCTTTCTTaGTCCCTCGTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSGLFLS*SLVAFT
Trigger: AGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCAAAAGAATCAGCAGATaGTTCTGTCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPKRISR*FCLWRL
Trigger: CAGTCTCCAGAGACAGAAGCATCTGCTGATTCTTTT...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCTCCTTCGAGTCCCCTaGACGATTTCATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMLLRVP*TISSCQ
Trigger: TTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATGCCAGGCGCTGGGCTaGGTTGCCTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSCQALG*VACSGS
Trigger: AGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTGGGCCCTGGGGAGTaGGCTGTCCCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLGPGE*AVPSCE
Trigger: CTCACAGCTCGGGACAGCGCACTCCCCAGGGCCCAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCCTCTCCGTGCACAGTaGTCTCTGAGTCACCAGATT +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMPLRAQ*SLSHQI
Trigger: AATCTGGTGACTCAGAGAGCACTGTGCACGGAGAGG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGGCCCTGGTGCAATGTaGCTTAGCGTTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSGPGAM*LSVLLL
Trigger: CAGCAGCAGAACGCTAAGGCACATTGCACCAGGGCC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGCGGGCGTTGAGCTCCTaGAGCTCGGCCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRRALSS*SSAFSG
Trigger: CCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCG...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNLTPTA*SFLLSA
Trigger: CGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCTGGTCTACCATTCTCTaGAGCTGCACCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: ASLQEPRSDTPRAPASCVWSTIL*SCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA...GACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACAAGGCCTTTGGATGTTaGCACGTCGCCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNKAFGC*HVANRL
Trigger: CAGCCTGTTGGCGACGTGCCAACATCCAAAGGCCTT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCGTGAGGTGGGTTCATaGTTGTTATTGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAREVGS*LLLYSS
Trigger: AGATGAATACAATAACAACCATGAACCCACCTCACG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGGTGTTCATCTGGAGTaGACACAAAATAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPGVHLE*TQNNSA
Trigger: AGCAGAGTTATTTTGTGTCCACTCCAGATGAACACC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAGGAGATGCCCTTCATaGAGGTGTGGAATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMRRCPS*RCGIRG
Trigger: CCCACGAATTCCACACCTCCATGAAGGGCATCTCCT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGCTGCCGGGGCTCCTTaGAGGAGATGCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTAAGAP*RRCPSW
Trigger: CCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTGGGCTGCCAGGCGCTaGGCTGCGTTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVWAARR*AALPAQ
Trigger: CTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAATGCAGAAGACTCTGCTaGGCCAGGTTCTGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKCRRLC*ARFWRA
Trigger: GGCTCGCCAGAACCTGGCCCAGCAGAGTCTTCTGCA...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATCGCCACCTCCAGACTaGGGCCGGTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSSPPPD*GRSSPA
Trigger: TGCAGGTGAAGACCGGCCTCAGTCTGGAGGTGGCGA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRTLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCAGATCCACGGTGCCCTaGCAGGTTAGAATACAGTGC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVRSTVP*QVRIQC
Trigger: GCACTGTATTCTAACCTGTCAGGGCACCGTGGATCT...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGTTCTGACGTTGGTTTaGCTGCTGACGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVVLTLV*LLTAFP
Trigger: CGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAAC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGTCTCTGGAGACTGAGTaGACTGCTTCAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSLETE*TASGYW
Trigger: CCAGTATCCTGAAGCAGTTCACTCAGTCTCCAGAGA...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGAGTGGGTCCTTCATATaGCATTCGCTCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSGSFI*HSLSPP
Trigger: TGGAGGACTGAGCGAATGTCATATGAAGGACCCACT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAGGACGAGCTGGTCCTTaGGCCTCCCAGACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKGRAGP*ASQTQF
Trigger: AAACTGAGTCTGGGAGGCTCAAGGACCAGCTCGTCC...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCCGCATCCAGGCGCTaGAGCTCCCGCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSASRR*SSRSSR
Trigger: GCGCGAGCTGCGGGAGCTGCAGCGCCTGGATGCGGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAGCCGCGCGCGCAGCTaGTCCAACCCGAGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCSRARS*SNPSAS
Trigger: CGAGGCGCTCGGGTTGGAGCAGCTGCGCGCGCGGCT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGTCTCATTTGACCGTGTaGTTTCCGAAGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSHLTV*FPKHLL
Trigger: CAGCAGGTGCTTCGGAAAGCACACGGTCAAATGAGA...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGCCTTCTCCTTCATCTaGTGGCTTTCTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMAFSFI*WLSLCL
Trigger: GAGACAGAGAGAAAGCCAGCAGATGAAGGAGAAGGC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTTTCGGGGACACCTCTaGTCTTCTGTCCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNFRGHL*SSVLGY
Trigger: GTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTTTCGGGGACACCTCTaGTCTTCTGTCCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVFRGHL*SSVLGY
Trigger: GTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGGTCATGGAATCGCCTTaGAGAGAACCAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMVMESP*REPVAS
Trigger: TGATGCCACTGGTTCTCTGCAAGGCGATTCCATGAC...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTCCTCGATGTGGATCTaGCCGTACACCGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTSSMWI*PYTEPS
Trigger: TGACGGCTCGGTGTACGGGCAGATCCACATCGAGGA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCACTGGCCTCATCTTTaGTCAGCTCCTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNHWPHL*SAPPGL
Trigger: TAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGGGCCGAGTTTTATGTaGCTTGCAGCCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSGPSFM*LAAWLT
Trigger: TGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGCTCCCTCCTGCCCTaGTCTTGTCCCGGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVGSLLP*SCPGLV
Trigger: GACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCC...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp GCAACTTTCTTTTCATCTGAAATCACCGACCTTTGGTCTACCATTCTCTGGAGCCGGGCGTTGAGCTCCTaGAGCTCGGCCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ATFFSSEITDLWSTILWSRALSS*SSAFSG
Trigger: CCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCG...GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTCAGATGAAAAGAAAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCCTCACGTCGCGTTCGTaGGCCGCGTCGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLLTSRS*AASRPR
Trigger: CCGAGGCCTCGACGCGGCCCACGAACGCGACGTGAG...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATTGTTCTCTGTGGGCCTaGTCTCCTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYCSLWA*SPSPAE
Trigger: CTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACA...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCCGTGAGGTGGGTTCATaGTTGTTATTGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPREVGS*LLLYSS
Trigger: AGATGAATACAATAACAACCATGAACCCACCTCACG...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAGCTGTCGTTGTAGCCTaGCTGAGGGTGGTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKAVVVA*LRVVLA
Trigger: AGCTAGCACCACCCTCAGCCAGGCTACAACGACAGC...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCAGGAGATGCCCTTCATaGAGGTGTGGAATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVRRCPS*RCGIRG
Trigger: CCCACGAATTCCACACCTCCATGAAGGGCATCTCCT...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCTCCACCTTCCTCATCTaGGCTGCCAGGCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSSTFLI*AARRWA
Trigger: AGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGA...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCGCCGACACTGGGCCCTaGGGAGTGCGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLADTGP*GVRCPE
Trigger: CTCGGGACAGCGCACTCCCCAGGGCCCAGTGTCGGC...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGACTTCTCTGGACAGTaGACTTTGACCGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSDFSGQ*TLTGTQ
Trigger: CTGGGTCCCGGTCAAAGTCCACTGTCCAGAGAAGTC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGTGTTGCACAAGACTTaGCACACCGCACTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVVLHKT*HTALSK
Trigger: CTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACAC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR TCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGACACTCACTCCCGCGTaGTTCACATTTAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMTLTPA*FTFSNQ
Trigger: TTGGTTGCTAAATGTGAATCACGCGGGAGTGAGTGT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACATAGATGTGCCCGTCTaGGATCCACGGTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHIDVPV*DPRCPD
Trigger: GTCAGGGCACCGTGGATCTCAGACGGGCACATCTAT...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCGTTGGTTTGACTGCTaGCGGCTTTTCCGTATGAGT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNRWFDC*RLFRMS
Trigger: ACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTCTCTGGAGACTGAGTaGACTGCTTCAGGATACTGG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSLETE*TASGYW
Trigger: CCAGTATCCTGAAGCAGTTCACTCAGTCTCCAGAGA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCCGACCTCCTCCACTTTaGATGGGACGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSRPPPL*MGRKTP
Trigger: AGGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCG...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACAGTGGGTCCTTCATATaGCATTCGCTCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSGSFI*HSLSPP
Trigger: TGGAGGACTGAGCGAATGTCATATGAAGGACCCACT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGCCAGGGAGAGAGGCTaGAGAGTCAGGGCACAGATG +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSARERG*RVRAQM
Trigger: CATCTGTGCCCTGACTCTTCAGCCTCTCTCCCTGGC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATCCTGCAGCTCGCGCTaGTGCGCACCCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSCSSR*CAPSSA
Trigger: CGCCGAGCTGGGTGCGCAGCAGCGCGAGCTGCAGGA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCGCGCGGGCGCGGAAATaGATGGTAAGGCTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLARARK*MVRLAA
Trigger: CGCCGCCAGCCTTACCATGCATTTCCGCGCCCGCGC...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGCTCGGCCACCAGCAGTaGGTAGCTGTCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRLGHQQ*VAVVHL
Trigger: GAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAG...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACCTCCGCCTGGAGTCTaGTCTCCTGGCCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGPPPGV*SPGRAA
Trigger: TGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCAGCGCCTCTGCCTCCTaGGCGCACAGCCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLSASAS*AHSRVS
Trigger: AGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTACCATTCTCTGGAGCTaGACCTTCTTATCAAACATG +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSTILWS*TFLSNM
Trigger: CATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGT...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSVRHSQ*DDAVLL
Trigger: CAGTAACACAGCATCATCGCACTGACTGTGGCGCAC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTCTCCAGAAACTACCTaGGGTAGCCACTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTSPETT*GSHSQD
Trigger: GTCCTGGGAGTGGCTACCGCAGGTAGTTTCTGGAGA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGGTAACGATGTTTTCTaGTACGGTTTCTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSGNDVF*YGFCHG
Trigger: TCCATGACAGAAACCGTAGCAGAAAACATCGTTACC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTCTGCTCGGCTGACTTaGCTTTCAGCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTSARLT*LSAPLP
Trigger: AGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCACGTTGACGACCTTTaGTCTCCCCTCCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTHVDDL*SPLPPF
Trigger: AAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGCTCCTTGGAGGAGATaGCCTTCATGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYAPWRR*PSWRCG
Trigger: TCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAAGGGTTTCCTCCAGCTaGCCGATGACCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRRVSSS*PMTSTS
Trigger: GCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCT...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGCTTCCTCATCTGGGCTaGCAGGCGCTGGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRLPHLG*QALGCV
Trigger: AACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAG...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGGGCCGAGTTTTATGTaGCTTGCAGCCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYGPSFM*LAAWLT
Trigger: TGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCTCACGTCGCGTTCGTaGGCCGCGTCGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSALTSRS*AASRPR
Trigger: CCGAGGCCTCGACGCGGCCCACGAACGCGACGTGAG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTGGAGTCTGCTCTCCTaGCCGCGCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCWSLLS*PRRSAS
Trigger: GGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 4 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGCTGTCGTTGTAGCCTaGCTGAGGGTGGTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHAVVVA*LRVVLA
Trigger: AGCTAGCACCACCCTCAGCCAGGCTACAACGACAGC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGTATGAGTTTTCCTGCTaGGTAGTGGCCGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMYEFSC*VVAEEE
Trigger: TTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATA...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGGTGTTCATCTGGAGTaGACACAAAATAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSGVHLE*TQNNSA
Trigger: AGCAGAGTTATTTTGTGTCCACTCCAGATGAACACC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTGCCTGACAGAAGTCTaGGTACCCACTGACTCTTCT +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVCLTEV*VPTDSS
Trigger: AGAAGAGTCAGTGGGTACCCAGACTTCTGTCAGGCA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAAACTATCTGCTGGGTaGTCTGATGCCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSKLSAG*SDASEA
Trigger: GGCCTCAGAGGCATCAGACCACCCAGCAGATAGTTT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTGCTGGTCATCTTCATaGGAGAGGTCCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTCWSSS*ERSWSP
Trigger: TGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKTLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCCACCAGTAGGAAACTaGAAAACACTCAGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMPPVGN*KTLSEY
Trigger: GTACTCACTGAGTGTTTTTCAGTTTCCTACTGGTGG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGTTCTGACGTTGGTTTaGCTGCTGACGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTVLTLV*LLTAFP
Trigger: CGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAAC...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCCGGCTTCTCCCCGCTaGCATAACTCACGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKPASPR*HNSRAP
Trigger: AGGAGCCCGTGAGTTATGTCAGCGGGGAGAAGCCGG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACCCTGCCAAGAGTACCTaGTGGTGGATTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHPAKST*WWIPPR
Trigger: TCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGG...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCACTGTGGGTTCGGCATaGAATTCACCGCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSTVGSA*NSPLLA
Trigger: AGCTAGAAGCGGTGAATTTCATGCCGAACCCACAGT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCACACCCTGGACCTTCTTaGCATCCACGGAAACGCTCC +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSHPGPS*HPRKRS
Trigger: GGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTG...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGAACCTCGCTCTCGCCTaGAGGGATGTACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRNLALA*RDVQLP
Trigger: CGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACGCTGTCCCGAGCTGTaGGAGGCCCCACCAGCAACC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGRCPEL*EAPPAT
Trigger: GGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAGCG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTGGACAGTGGACTTTaGCCGGGACCCAGCGTGACA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLDSGL*PGPSVT
Trigger: TGTCACGCTGGGTCCCGGTCAAAGTCCACTGTCCAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCGCTGCTGCCGCAAGCTaGGCGCCTCCTCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPAAAAS*APPRRS
Trigger: GCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGC...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAAGCTCGTCCAGCTGCTaGCGCAAGCTGCGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSSSSC*RKLRAS
Trigger: GGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTCCTGCAGCTCGCGCTaGTGCGCACCCAGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASSCSSR*CAPSSA
Trigger: CGCCGAGCTGGGTGCGCAGCAGCGCGAGCTGCAGGA...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAGCGCCTCTGCCTCCTaGGCGCACAGCCGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSASASAS*AHSRVS
Trigger: AGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVGMFST*SAQITI
Trigger: GATAGTGATCTGGGCTGAGCACGTTGAAAACATGCC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTAC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRLPVSG*GSPLRY
Trigger: GTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVKAHTN*LVIPTV
Trigger: GACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTT...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNKAHTN*LVIPTV
Trigger: GACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKVRHSQ*DDAVLL
Trigger: CAGTAACACAGCATCATCGCACTGACTGTGGCGCAC...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATCCGTATGAGTTTTCCTaGTGGGTAGTGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYPYEFS*WVVAEE
Trigger: TTCCTCGGCCACTACCCAGCAGGAAAACTCATACGG...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTTTCGGGGACACCTCTaGTCTTCTGTCCTGGGATAC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTFRGHL*SSVLGY
Trigger: GTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGTCATGGAATCGCCTTaGAGAGAACCAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSVMESP*REPVAS
Trigger: TGATGCCACTGGTTCTCTGCAAGGCGATTCCATGAC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACACTGGCCTCATCTTTaGTCAGCTCCTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKHWPHL*SAPPGL
Trigger: TAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCTGGGCTGCGTTGCCTaGTCAGGCTCTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKLGCVA*SGSPEP
Trigger: TGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATGCCAGGCGCTGGGCTaGGTTGCCTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKCQALG*VACSGS
Trigger: AGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTGCTGTCTGCTAACTTaGCTAGCTCAGGGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHCCLLT*LAQGSP
Trigger: CGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTACCGCACTCAGCAAGTaGTGGTCATCTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTTALSK*WSSSWE
Trigger: CTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CCA 90 bp ATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: IPTVRVSPGTTVRHTESSKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTGGGTATCTCGGTGCTaGGCTGCAGGAGAGATATCC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHWVSRC*AAGEIS
Trigger: GGATATCTCTCCTGCAGCCCAGCACCGAGATACCCA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGCCACTCCCAGGACCTaGGGAGACGTGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGATPRT*GDVHPG
Trigger: CCCAGGGTGCACGTCTCCCCAGGTCCTGGGAGTGGC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCTACGGTTTCTGTCATaGAATCGCCTTGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVLRFLS*NRLAEN
Trigger: GTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTAGTGACTTTTGTGTCTaGAAAAGAATCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSSDFCV*KRISRC
Trigger: GCATCTGCTGATTCTTTTCCAGACACAAAAGTCACT...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCTCCTCCACTTTGAATaGGACGGAAAACTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTLLHFE*DGKLLR
Trigger: CCGGAGGAGTTTTCCGTCCCATTCAAAGTGGAGGAG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCCCGGGGTGTTCATCTaGAGTGGACACAAAATAACT +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVPGVFI*SGHKIT
Trigger: AGTTATTTTGTGTCCACTCCAGATGAACACCCCGGG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTCCAGAGAGGGCGCTaGGACATCCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLQRGR*DIQGLH
Trigger: GTGAAGCCCTTGGATGTCCCAGCGCCCTCTCTGGAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGTTCTTTCCAGTGAGTaGAACCCAGGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHVLSSE*NPGPPP
Trigger: TGGAGGGGGACCTGGGTTCCACTCACTGGAAAGAAC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTGGGCTGCCAGGCGCTaGGCTGCGTTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCWAARR*AALPAQ
Trigger: CTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCCACAGTGGCCGACACTaGGCCCTGGGGAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCHSGRH*ALGSAL
Trigger: CAGCGCACTCCCCAGGGCCCAGTGTCGGCCACTGTG...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCACAGTGGCCGACACTaGGCCCTGGGGAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAHSGRH*ALGSAL
Trigger: CAGCGCACTCCCCAGGGCCCAGTGTCGGCCACTGTG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACCCACCACTTCTGCAGTaGGTCCTTCATATGACATTC +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNPPLLQ*VLHMTF
Trigger: GAATGTCATATGAAGGACCCACTGCAGAAGTGGTGG...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCGAGCCCCATGCCTCTaGACAGGCAGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASRAPCL*TGRGRA
Trigger: GGCCCTGCCCCTGCCTGTCCAGAGGCATGGGGCTCG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCACACGGGTCCACGGATaGCAATGTGTTCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSTRVHG*QCVQRF
Trigger: AAACCTCTGAACACATTGCCATCCGTGGACCCGTGT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCAGCCATGGCCAAGGTaGGGGTTGCCTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVQPWPR*GLPSHP
Trigger: AGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTACACTCCGCGGCCCATaGGCATGGGGGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSATLRGP*AWGPFS
Trigger: CGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACCATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCACACTCACTCCCGCGTaGTTCACATTTAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSTLTPA*FTFSNQ
Trigger: TTGGTTGCTAAATGTGAATCACGCGGGAGTGAGTGT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCCACCAGTAGGAAACTaGAAAACACTCAGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVPPVGN*KTLSEY
Trigger: GTACTCACTGAGTGTTTTTCAGTTTCCTACTGGTGG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATCGTTGGTTTGACTGCTaGCGGCTTTTCCGTATGAGT +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYRWFDC*RLFRMS
Trigger: ACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACG...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGACGGTCCTCTCATTTaGCCGTGTGCTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSDGPLI*PCAFRS
Trigger: GCTTCGGAAAGCACACGGTCAAATGAGAGGACCGTC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTTTTCTTTCCCAGAATaGCGGTCCTCTCATTTGACC +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVFSFPE*RSSHLT
Trigger: GGTCAAATGAGAGGACCGTCATTCTGGGAAAGAAAA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTCCTGTCCACGTAAGTaGCTTTTGTGTCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSCPRK*LLCLEK
Trigger: CTTTTCCAGACACAAAAGTCACTTACGTGGACAGGA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCCACGATCTCCACGTTaGCGACCTTTGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVPRSPR*RPLLSP
Trigger: AGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACCTGCCAAGAGTACCTaGTGGTGGATTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRPAKST*WWIPPR
Trigger: TCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTACTGTGGGTTCGGCATaGAATTCACCGCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTTVGSA*NSPLLA
Trigger: AGCTAGAAGCGGTGAATTTCATGCCGAACCCACAGT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCCTGCCCCTCTCTGGTaGGGGCGGACAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPPAPLW*GRTAPP
Trigger: GGGAGGAGCTGTCCGCCCTCACCAGAGAGGGGCAGG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGGCATCCACAGTTTGTaGGACGTTGACTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYGIHSL*DVDFSN
Trigger: GTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCGCTGTCCCGAGCTGTaGGAGGCCCCACCAGCAACC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASRCPEL*EAPPAT
Trigger: GGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAGCG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGACCGGGACCCAGCGTaGCATGCCTCACAGACCGGC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASDRDPA*HASQTG
Trigger: GCCGGTCTGTGAGGCATGTCACGCTGGGTCCCGGTC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGGCACAGATGCAGATaGTGGCAGCTCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKGHRCR*WQLRRV
Trigger: GACCCTGCGGAGCTGCCATCATCTGCATCTGTGCCC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGCCAGGACAGCATCTTaGCGGGCGTGCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGARTAS*RACGVL
Trigger: GAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCCTCGGCCACCAGCAGTaGGTAGCTGTCGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLLGHQQ*VAVVHL
Trigger: GAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAG...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVCTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGCTGTGATTGAAACTTaGCAAAGGTGCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVAVIET*QRCFLP
Trigger: AGGCAGAAAGCACCTTTGGCAAGTTTCAATCACAGC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTTCCGAAGCACCTGCTaGCACCTTGTCTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVFRSTC*HLVSAI
Trigger: GATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATCCTTCACAGGCGTCTaGAAACCTTTCGGGGACACC +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSSFTGV*KPFGDT
Trigger: GGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTCCTCGATGTGGATCTaGCCGTACACCGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVSSMWI*PYTEPS
Trigger: TGACGGCTCGGTGTACGGGCAGATCCACATCGAGGA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGAGGGTTTCCTCCAGCTaGCCGATGACCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKRVSSS*PMTSTS
Trigger: GCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGACAGCTCCTCCCTCATaGGCTCGGGAAGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRTAPPS*AREGFP
Trigger: AGGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCTGGGCCCTGGGGAGTaGGCTGTCCCGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVILGPGE*AVPSCE
Trigger: CTCACAGCTCGGGACAGCGCACTCCCCAGGGCCCAG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATGAGTTTTATGTGCCTTaGAGCCTGGCTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYEFYVP*SLAHIL
Trigger: GAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTC...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGTCTGCAGCCAAATGTaGTGTGCCTCCCTGATCCGT +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRVCSQM*CASLIR
Trigger: ACGGATCAGGGAGGCACAGCACATTTGGCTGCAGAC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTGGCTCCCTCCTGCCCTaGTCTTGTCCCGGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSGSLLP*SCPGLV
Trigger: GACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCC...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCGGGCGTTGAGCTCCTaGAGCTCGGCCTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIRALSS*SSAFSG
Trigger: CCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCCTCCGCCAGCGCAGTaGCCCAGCTCAGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASPPPAQ*PSSARP
Trigger: TGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCCTCCGCCAGCGCAGTaGCCCAGCTCAGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIPPPAQ*PSSARP
Trigger: TGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTGGTCTACCATTCTCTaGAGCTGCACCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVWSTIL*SCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAAAGGCCTTTGGATGTTaGCACGTCGCCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSKAFGC*HVANRL
Trigger: CAGCCTGTTGGCGACGTGCCAACATCCAAAGGCCTT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 4 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCCCCCAGGCCCGTCCTaGGTATCTCGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASPPGPS*VSRCWA
Trigger: AGCCCAGCACCGAGATACCCAGGACGGGCCTGGGGG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGGGAGACGTGCACCCTaGGGGTCTGAGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASGRRAP*GSEGLQ
Trigger: CTGGAGGCCCTCAGACCCCCAGGGTGCACGTCTCCC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGTTCTTTCCAGTGAGTaGAACCCAGGTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSVLSSE*NPGPPP
Trigger: TGGAGGGGGACCTGGGTTCCACTCACTGGAAAGAAC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCCCTTCATGGAGGTGTaGAATTCGTGGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVPFMEV*NSWGIL
Trigger: TAAAATACCCCACGAATTCCACACCTCCATGAAGGG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCCTTCTCCATCTCACTaGCCTCATCTTTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTPSPSH*PHLCSA
Trigger: AGCTGAGCAAAGATGAGGCCAGTGAGATGGAGAAGG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCGCCGACACTGGGCCCTaGGGAGTGCGCTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPADTGP*GVRCPE
Trigger: CTCGGGACAGCGCACTCCCCAGGGCCCAGTGTCGGC...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTCCAGCACCTGTGACTaGGCAAAGCCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKSSTCD*AKPVGL
Trigger: CAGCCCCACAGGCTTTGCCCAGTCACAGGTGCTGGA...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCATAGAGCCGGGCGTTaGGCTCCTGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASHRAGR*APGARP
Trigger: AGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCGCCACCTCCAGACTaGGGCCGGTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSASPPPD*GRSSPA
Trigger: TGCAGGTGAAGACCGGCCTCAGTCTGGAGGTGGCGA...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCACCAACAATAGCTCATaGGTCCATACTTGTAAATAC +
Preference number: 4 (lower is better)
Translates to: IPTVRVSPGTTVRHTESSTNNSS*VHTCKY
Trigger: GTATTTACAAGTATGGACTCATGAGCTATTGTTGGT...GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAAGATCCACGGTGCCCTaGCAGGTTAGAATACAGTGC +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSRSTVP*QVRIQC
Trigger: GCACTGTATTCTAACCTGTCAGGGCACCGTGGATCT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGTTCTGACGTTGGTTTaGCTGCTGACGGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRVLTLV*LLTAFP
Trigger: CGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAAC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACCAGTTTGTGAGACGTTaGCTTCAGCAACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHQFVRR*LQQPGS
Trigger: TGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTG...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGGCATCCACAGTTTGTaGGACGTTGACTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHGIHSL*DVDFSN
Trigger: GTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAAACCTCGCTCTCGCCTaGAGGGATGTACAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKNLALA*RDVQLP
Trigger: CGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTCAGGGGAGTCCGCTaGACCAGCAAGCACAAATGT +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLRGVR*TSKHKC
Trigger: ACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTGAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTTCTCGGGGCCCGTCTaGAGCCGCCAGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIFSGPV*SRQDSI
Trigger: GATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCGCGCGGGCGCGGAAATaGATGGTAAGGCTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPARARK*MVRLAA
Trigger: CGCCGCCAGCCTTACCATGCATTTCCGCGCCCGCGC...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR GCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATAAAGCTCACACCAACTaGCTGGTCATTCCTACTGTC +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYKAHTN*LVIPTV
Trigger: GACAGTAGGAATGACCAGGCAGTTGGTGTGAGCTTT...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGACATGGCCTGCTCCTTaGCCTGTTCTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKTWPAP*PVLCGP
Trigger: AGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCATCTCGGTGCTGGGCTaGAGGAGAGATATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSISVLG*RRDIQF
Trigger: GAACTGGATATCTCTCCTGCAGCCCAGCACCGAGAT...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCCAGGTTAGAATACAGTaGCGAGCTGTGATTGAAACT +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVQVRIQ*RAVIET
Trigger: AGTTTCAATCACAGCTCGGCACTGTATTCTAACCTG...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACATCTCATTTGACCGTGTaGTTTCCGAAGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTSHLTV*FPKHLL
Trigger: CAGCAGGTGCTTCGGAAAGCACACGGTCAAATGAGA...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACGGTAACGATGTTTTCTaGTACGGTTTCTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNGNDVF*YGFCHG
Trigger: TCCATGACAGAAACCGTAGCAGAAAACATCGTTACC...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCCCGTCATCTCTGTCGTaGCCCCCGGGGTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLPSSLS*PPGCSS
Trigger: AGATGAACACCCCGGGGGGCACGACAGAGATGACGG...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACCGTCATCTCTGTCGTaGCCCCCGGGGTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKPSSLS*PPGCSS
Trigger: AGATGAACACCCCGGGGGGCACGACAGAGATGACGG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACTCCTTCGAGTCCCCTaGACGATTTCATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRLLRVP*TISSCQ
Trigger: TTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCCTGGGCTGCGTTGCCTaGTCAGGCTCTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCLGCVA*SGSPEP
Trigger: TGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAG...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLTPTA*SFLLSA
Trigger: CGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGAAGGCCTTTGGATGTTaGCACGTCGCCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRKAFGC*HVANRL
Trigger: CAGCCTGTTGGCGACGTGCCAACATCCAAAGGCCTT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGCTGTCGTTGTAGCCTaGCTGAGGGTGGTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKAVVVA*LRVVLA
Trigger: AGCTAGCACCACCCTCAGCCAGGCTACAACGACAGC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCTTGCAGAGAACCAGTaGCATCACTGGTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLAENQ*HHWCPT
Trigger: GGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACTACGGTTTCTGTCATaGAATCGCCTTGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKLRFLS*NRLAEN
Trigger: GTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGATGCTTCTGTCTCTaGAGACTGAGTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSRCFCL*RLSELL
Trigger: AAGCAGTTCACTCAGTCTCCAGAGACAGAAGCATCT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCAACCCCCAGGGGCCTaGCGACACATCTTCGACCTC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSQPPGA*RHIFDL
Trigger: GAGGTCGAAGATGTGTCGCCAGGCCCCTGGGGGTTG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGATTCCTCCTCGATGTaGATCTGCCCGTACACCGAG +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVDSSSM*ICPYTE
Trigger: CTCGGTGTACGGGCAGATCCACATCGAGGAGGAATC...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACTCCAGAGAGGGCGCTaGGACATCCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKLQRGR*DIQGLH
Trigger: GTGAAGCCCTTGGATGTCCCAGCGCCCTCTCTGGAG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTGCTGCCGGGGCTCCTTaGAGGAGATGCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAAAGAP*RRCPSW
Trigger: CCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGC...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACACCTTCTCCATCTCACTaGCCTCATCTTTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTPSPSH*PHLCSA
Trigger: AGCTGAGCAAAGATGAGGCCAGTGAGATGGAGAAGG...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAATTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCCACCAGTAGGAAACTaGAAAACACTCAGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTPPVGN*KTLSEY
Trigger: GTACTCACTGAGTGTTTTTCAGTTTCCTACTGGTGG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGTGCCGAGCTGTGATTaGAACTTGCCAAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSVPSCD*NLPKVL
Trigger: AAGCACCTTTGGCAAGTTTCAATCACAGCTCGGCAC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTACAGTGCCGAGCTGTaGTTGAAACTTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHYSAEL*LKLAKG
Trigger: ACCTTTGGCAAGTTTCAATCACAGCTCGGCACTGTA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTTTTCTTTCCCAGAATaGCGGTCCTCTCATTTGACC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTFSFPE*RSSHLT
Trigger: GGTCAAATGAGAGGACCGTCATTCTGGGAAAGAAAA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGCTTGTTCTTTCCAGTaGGTGGAACCCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKACSFQ*VEPRSP
Trigger: GGGGGACCTGGGTTCCACTCACTGGAAAGAACAAGC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATC +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTGMFST*SAQITI
Trigger: GATAGTGATCTGGGCTGAGCACGTTGAAAACATGCC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTAC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKLPVSG*GSPLRY
Trigger: GTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCACCATTCTCTGGAGCTaGACCTTCTTATCAAACATG +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSTILWS*TFLSNM
Trigger: CATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGATCTCGGTGCTGGGCTaGAGGAGAGATATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRISVLG*RRDIQF
Trigger: GAACTGGATATCTCTCCTGCAGCCCAGCACCGAGAT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCCAGGTTAGAATACAGTaGCGAGCTGTGATTGAAACT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSQVRIQ*RAVIET
Trigger: AGTTTCAATCACAGCTCGGCACTGTATTCTAACCTG...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCTTCCGAAGCACCTGCTaGCACCTTGTCTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLFRSTC*HLVSAI
Trigger: GATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAA...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGATCTCATTTGACCGTGTaGTTTCCGAAGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRSHLTV*FPKHLL
Trigger: CAGCAGGTGCTTCGGAAAGCACACGGTCAAATGAGA...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGGTCTGTTTCTTTCTTaGTCCCTCGTGGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHGLFLS*SLVAFT
Trigger: AGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTCCTTCACAGGCGTCTaGAAACCTTTCGGGGACACC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKSFTGV*KPFGDT
Trigger: GGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGA...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGAACCTTCTCGCCCACTaGACCGTCCTTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKNLLAH*TVLLCP
Trigger: AGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGTT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAGGGTTTCCTCCAGCTaGCCGATGACCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSARVSSS*PMTSTS
Trigger: GCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCTTCCTCATCTGGGCTaGCAGGCGCTGGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVILPHLG*QALGCV
Trigger: AACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGAGTTTTATGTGCCTTaGAGCCTGGCTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLREFYVP*SLAHIL
Trigger: GAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGACACAGCGTCTTCATaGTCCGTCTCACTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHDTASS*SVSLQN
Trigger: ATTTTGGAGTGAGACGGAGCATGAAGACGCTGTGTC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACCTCCGCCAGCGCAGTaGCCCAGCTCAGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSPPPAQ*PSSARP
Trigger: TGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCTGTTCTCTGTGGGCCTaGTCTCCTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLCSLWA*SPSPAE
Trigger: CTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACA...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAATGGTCTACCATTCTCTaGAGCTGCACCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKWSTIL*SCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTATGAGTTTTCCTGCTaGGTAGTGGCCGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHYEFSC*VVAEEE
Trigger: TTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCTGTATCTCCGGCTTTTaGTCTGTCAGGGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSCISGF*SVRECF
Trigger: AAAACATTCCCTGACAGACCAAAAGCCGGAGATACA...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAAGATGCTTCTGTCTCTaGAGACTGAGTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKRCFCL*RLSELL
Trigger: AAGCAGTTCACTCAGTCTCCAGAGACAGAAGCATCT...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATAGATGCTTCTGTCTCTaGAGACTGAGTGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYRCFCL*RLSELL
Trigger: AAGCAGTTCACTCAGTCTCCAGAGACAGAAGCATCT...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGATTCCTCCTCGATGTaGATCTGCCCGTACACCGAG +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKDSSSM*ICPYTE
Trigger: CTCGGTGTACGGGCAGATCCACATCGAGGAGGAATC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACCCTTCATGGAGGTGTaGAATTCGTGGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKPFMEV*NSWGIL
Trigger: TAAAATACCCCACGAATTCCACACCTCCATGAAGGG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAATGTGCCTTGCAGCCTaGCTCACATCCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKMCLAA*LTSSST
Trigger: GGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACAT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACCCACCACTTCTGCAGTaGGTCCTTCATATGACATTC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHPPLLQ*VLHMTF
Trigger: GAATGTCATATGAAGGACCCACTGCAGAAGTGGTGG...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACTCTTTAGGGCCTAACTaGAGTTGCCTGACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHSLGPN*SCLTEV
Trigger: GACTTCTGTCAGGCAACTCCAGTTAGGCCCTAAAGA...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATGCAAGCCATGTCTGTaGCCAGGTGCAAAACATAGA +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSCKPCL*PGAKHR
Trigger: TCTATGTTTTGCACCTGGTCACAGACATGGCTTGCA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVRRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRRRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAACACTGACATCAAACTaGGCCCACTTAGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRTLTSN*AHLDSS
Trigger: TGAGGAGTCTAAGTGGGCTCAGTTTGATGTCAGTGT...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCGATAGGATTTGTTTCTaGATTCTGACGGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: QPACRSSCSLSIGILFIVDRICF*ILTACF
Trigger: AAAACATGCCGTCAGAATTCAGAAACAAATCCTATC...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGAGATCCACGGTGCCCTaGCAGGTTAGAATACAGTGC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKRSTVP*QVRIQC
Trigger: GCACTGTATTCTAACCTGTCAGGGCACCGTGGATCT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCGACGGTCCTCTCATTTaGCCGTGTGCTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLDGPLI*PCAFRS
Trigger: GCTTCGGAAAGCACACGGTCAAATGAGAGGACCGTC...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACCACGATCTCCACGTTaGCGACCTTTGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGPRSPR*RPLLSP
Trigger: AGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTTGGTCCTTCGATGCTaGTTAACTGAGAATGTGACA +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTLVLRC*LTENVT
Trigger: TGTCACATTCTCAGTTAATCAGCATCGAAGGACCAA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTACTCTGCTCGCCCTCTaGATCACCTGCCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSTLLAL*ITCLCH
Trigger: GTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGT...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCACTCTGCTCGCCCTCTaGATCACCTGCCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCTLLAL*ITCLCH
Trigger: GTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCAGTTTGTGAGACGTTaGCTTCAGCAACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVQFVRR*LQQPGS
Trigger: TGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTATCCTCCAGCACCTGTaGCTGGGCAAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASILQHL*LGKACG
Trigger: CCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGAT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACAGGGCCTAGGAAGATaGCTTCTCTGGACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKQGLGR*LLWTVD
Trigger: GTCCACTGTCCAGAGAAGTCATCTTCCTAGGCCCTG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGGCCAAGGTGAGGGTTaGCTTCTCATCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCGQGEG*LLILQA
Trigger: TGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGCATCTACCCTACCAGTaGCAGGGAACCTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRHLPYQ*QGTCAN
Trigger: ATTTGCACAGGTTCCCTGGCACTGGTAGGGTAGATG...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATGTACACAGCCAGCTTaGCGGTCCAGCTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGCTQPA*RSSCSL
Trigger: CAGACTGCAGCTGGACCGGCAAGCTGGCTGTGTACA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGGGAAGACCCTCCAGTaGTGTCGTTGTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGGKTLQ*CRCSLA
Trigger: AGCCAGGCTACAACGACAGCACTGGAGGGTCTTCCC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGGCACGCTGTGATTGAAACTTaGCAAAGGTGCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ERPASHEWRVGKGIFKRHAVIET*QRCFLP
Trigger: AGGCAGAAAGCACCTTTGGCAAGTTTCAATCACAGC...GTGCCTCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGGTAACGATGTTTTCTaGTACGGTTTCTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTGNDVF*YGFCHG
Trigger: TCCATGACAGAAACCGTAGCAGAAAACATCGTTACC...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCTGCTCGGCTGACTTaGCTTTCAGCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSARLT*LSAPLP
Trigger: AGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTCCTCGATGTGGATCTaGCCGTACACCGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSSSMWI*PYTEPS
Trigger: TGACGGCTCGGTGTACGGGCAGATCCACATCGAGGA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTACAGCTCCTCCCTCATaGGCTCGGGAAGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSATAPPS*AREGFP
Trigger: AGGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCTGGGCTGCGTTGCCTaGTCAGGCTCTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPLGCVA*SGSPEP
Trigger: TGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACAGCATGAAATTGTCTaGAGCCAAATGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRQHEIV*SQMCCA
Trigger: GGCACAGCACATTTGGCTGCAGACAATTTCATGCTG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCTGTGTGAGACGTGTTaGACAAGACTTGGCACACCG +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKLCETC*TRLGTP
Trigger: CGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAAAGGCCTTTGGATGTTaGCACGTCGCCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKKAFGC*HVANRL
Trigger: CAGCCTGTTGGCGACGTGCCAACATCCAAAGGCCTT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTAATAAACTGTTTCCCTaGACAAAACACCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTNKLFP*TKHPNC
Trigger: GCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTATT...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCTATGAGTTTTCCTGCTaGGTAGTGGCCGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSYEFSC*VVAEEE
Trigger: TTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATA...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATCTGGCTTTGTTCGGATaGTTTCTGGTCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYLALFG*FLVCFF
Trigger: AAAGAAACAGACCAGAAACCATCCGAACAAAGCCAG...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCTCCAGAGAGGGCGCTaGGACATCCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVILQRGR*DIQGLH
Trigger: GTGAAGCCCTTGGATGTCCCAGCGCCCTCTCTGGAG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCTGCCACCAGCACCCTaGACCTTCTTGACATCCACG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSALPPAP*TFLTST
Trigger: CGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCCTTCTCCATCTCACTaGCCTCATCTTTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVPSPSH*PHLCSA
Trigger: AGCTGAGCAAAGATGAGGCCAGTGAGATGGAGAAGG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTCCACCTTCCTCATCTaGGCTGCCAGGCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPSTFLI*AARRWA
Trigger: AGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTCCAGCACCTGTGACTaGGCAAAGCCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASSSTCD*AKPVGL
Trigger: CAGCCCCACAGGCTTTGCCCAGTCACAGGTGCTGGA...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCATGTGCCTTGCAGCCTaGCTCACATCCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCMCLAA*LTSSST
Trigger: GGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACAT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTGCAAGCCATGTCTGTaGCCAGGTGCAAAACATAGA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVCKPCL*PGAKHR
Trigger: TCTATGTTTTGCACCTGGTCACAGACATGGCTTGCA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGTCCAGCTGCAGTCTaGGTATCGGCATTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKGPAAV*VSAFSS
Trigger: TGAAGAGAATGCCGATACTCAGACTGCAGCTGGACC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ACCTTTGGTCTACCATTCTCTGGAGCTGCACCTTCTTATCAAACATGGCCTGCTTCCTCCACTTATCAATaGAGAAAACGTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TFGLPFSGAAPSYQTWPASSTYQ*RKRALQ
Trigger: CTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGA...AGCAGGCCATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCTGAAAAACACTCAGTaGGTACTGTTTTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTLKNTQ*VLFCLS
Trigger: ACTGAGACAAAACAGTACTCACTGAGTGTTTTTCAG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTCTGTCTCTGGAGACTaGGTGAACTGCTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRSVSGD*VNCFRI
Trigger: TATCCTGAAGCAGTTCACTCAGTCTCCAGAGACAGA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCCTGCCAAGAGTACCTaGTGGTGGATTCCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAPAKST*WWIPPR
Trigger: TCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGTACAGAATCTCCTATaGCACCCAACTCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVVQNLL*HPTPPC
Trigger: ACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTAC...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTAC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASLPVSG*GSPLRY
Trigger: GTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTACATGGCCTGCTCCTTaGCCTGTTCTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASTWPAP*PVLCGP
Trigger: AGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCATCTCGGTGCTGGGCTaGAGGAGAGATATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLISVLG*RRDIQF
Trigger: GAACTGGATATCTCTCCTGCAGCCCAGCACCGAGAT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGCTGTGATTGAAACTTaGCAAAGGTGCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSAVIET*QRCFLP
Trigger: AGGCAGAAAGCACCTTTGGCAAGTTTCAATCACAGC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTCTGCTCGGCTGACTTaGCTTTCAGCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCSARLT*LSAPLP
Trigger: AGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTGCACGATTTCATCCTaGCAAGAGTACCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRCTISS*QEYLMV
Trigger: CACCATCAGGTACTCTTGGCAGGATGAAATCGTGCA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTAACCTTCTCGCCCACTaGACCGTCCTTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSNLLAH*TVLLCP
Trigger: AGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGTT...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAAACCTTCTCGCCCACTaGACCGTCCTTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGNLLAH*TVLLCP
Trigger: AGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGTT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTGCTCCTTGGAGGAGATaGCCTTCATGGAGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAAPWRR*PSWRCG
Trigger: TCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGC...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACACTGGCCTCATCTTTaGTCAGCTCCTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKHWPHL*SAPPGL
Trigger: TAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGGACCTAGTCGAATGTaGCTAAAGGATCTGCTAACA +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSGPSRM*LKDLLT
Trigger: TGTTAGCAGATCCTTTAGGCACATTCGACTAGGTCC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCCAGATCACTATCTCTaGATTACTTTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTPDHYL*ITFSFQ
Trigger: TTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCLTPTA*SFLLSA
Trigger: CGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAG...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWREITDL*STILWS
Trigger: GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAAATAAACTGTTTCCCTaGACAAAACACCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTNKLFP*TKHPNC
Trigger: GCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTATT...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTGGGTATCTCGGTGCTaGGCTGCAGGAGAGATATCC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSWVSRC*AAGEIS
Trigger: GGATATCTCTCCTGCAGCCCAGCACCGAGATACCCA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAGATTCCTCCTCGATGTaGATCTGCCCGTACACCGAG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGDSSSM*ICPYTE
Trigger: CTCGGTGTACGGGCAGATCCACATCGAGGAGGAATC...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCCCTTCATGGAGGTGTaGAATTCGTGGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSPFMEV*NSWGIL
Trigger: TAAAATACCCCACGAATTCCACACCTCCATGAAGGG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCTGCCACCAGCACCCTaGACCTTCTTGACATCCACG +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVILPPAP*TFLTST
Trigger: CGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCAGGTATGACTGTGAGTaGCCTGGTGCACATCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLRYDCE*PGAHLL
Trigger: CAGCAGATGTGCACCAGGCCACTCACAGTCATACCT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp GCAACTTTCTTTTCATCTGAAATCACCGACCTTTGGTCTACCATTCTCTGGAGCTGCAAGCCATGTCTGTaGCCAGGTGCAAAACATAGA +
Preference number: 4 (lower is better)
Translates to: ATFFSSEITDLWSTILWSCKPCL*PGAKHR
Trigger: TCTATGTTTTGCACCTGGTCACAGACATGGCTTGCA...GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTCAGATGAAAAGAAAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAAAGACCTGCATCCCATaGATGGAGGGTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGKTCIP*MEGWER
Trigger: CCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCTCTTGTGTGCAGAGTaGCTGATTTTAAAGGACATG +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSLLCAE*LILKDM
Trigger: CATGTCCTTTAAAATCAGTCACTCTGCACACAAGAG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCACTCTTGTGTGCAGAGTaGCTGATTTTAAAGGACATG +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSLLCAE*LILKDM
Trigger: CATGTCCTTTAAAATCAGTCACTCTGCACACAAGAG...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCACTGGTGCCCAACCTaGACCGTAGCTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIHWCPT*TVALLL
Trigger: AAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCCACGATCTCCACGTTaGCGACCTTTGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPPRSPR*RPLLSP
Trigger: AGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCGACCTCCTCCACTTTaGATGGGACGGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSRPPPL*MGRKTP
Trigger: AGGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCTCGATGCTGATTAACTaGGAATGTGACATCGCTTTC +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSSMLIN*ECDIAF
Trigger: GAAAGCGATGTCACATTCTCAGTTAATCAGCATCGA...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAATCCTCCAGCACCTGTaGCTGGGCAAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSILQHL*LGKACG
Trigger: CCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGAT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTGTGCTGTGCCTCCCTaGTCCGTCCATATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVICAVPP*SVHICR
Trigger: TCTGCAGATATGGACGGATCAGGGAGGCACAGCACA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCGGCCAAGGTGAGGGTTaGCTTCTCATCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPGQGEG*LLILQA
Trigger: TGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCC...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 4 (lower is better)
Translates to: IHLSPLSSERPASHEWRVAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTGTGCGCCACAGTCAGTaGGATGATGCTGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAVRHSQ*DDAVLL
Trigger: CAGTAACACAGCATCATCGCACTGACTGTGGCGCAC...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRSMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGCCAAAGGTGCTTTCTaGCTTGAAAATAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTAKGAF*LENRFL
Trigger: AAGGAATCTATTTTCAAGGCAGAAAGCACCTTTGGC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCCGTATGAGTTTTCCTaGTGGGTAGTGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAPYEFS*WVVAEE
Trigger: TTCCTCGGCCACTACCCAGCAGGAAAACTCATACGG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGCTTTCCGAAGCACCTaGTGCCACCTTGTCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSAFRST*CHLVSA
Trigger: CGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGGGCCGAGTTTTATGTaGCTTGCAGCCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASGPSFM*LAAWLT
Trigger: TGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTATCTGCAGAAGACTCTaGTGGGCCAGGTTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIICRRL*WARFWR
Trigger: TCGCCAGAACCTGGCCCAGCAGAGTCTTCTGCAGAT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACAGCCAAATGTGCTGTaGCTCCCTGATCCGTCCATA +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGQPNVL*LPDPSI
Trigger: TATGGACGGATCAGGGAGGCACAGCACATTTGGCTG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCTGTGCCTTAGCGTTCTaGTGCTGTCTGCTAACTTGC +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLCALAF*CCLLTC
Trigger: GCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACA...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACACCAGATCACTATCTCTaGATTACTTTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTPDHYL*ITFSFQ
Trigger: TTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGG...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCATGTATCTCCGGCTTTTaGTCTGTCAGGGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSCISGF*SVRECF
Trigger: AAAACATTCCCTGACAGACCAAAAGCCGGAGATACA...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCTACGGTTTCTGTCATaGAATCGCCTTGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKLRFLS*NRLAEN
Trigger: GTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACTCCTCCACTTTGAATaGGACGGAAAACTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGLLHFE*DGKLLR
Trigger: CCGGAGGAGTTTTCCGTCCCATTCAAAGTGGAGGAG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCCCGGGGTGTTCATCTaGAGTGGACACAAAATAACT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKPGVFI*SGHKIT
Trigger: AGTTATTTTGTGTCCACTCCAGATGAACACCCCGGG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAGGAGATGCCCTTCATaGAGGTGTGGAATTCGTGGG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSARRCPS*RCGIRG
Trigger: CCCACGAATTCCACACCTCCATGAAGGGCATCTCCT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTGCACTCAGCAAGTGCTaGTCATCTTCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAALSKC*SSSWER
Trigger: CCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGC...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
3UTR CAA 72 bp AGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTaGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: RLVVFRPHPTTK*ISLVCRVTDFK
Trigger: TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCCCACAGTCAGTGCGATaGTGCTGTGTTACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLPQSVR*CCVTGN
Trigger: ATTTCCAGTAACACAGCATCATCGCACTGACTGTGG...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSRRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAGGAGGCTGTCACCTTaGCCAAATTCTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSARRLSP*PNSHQS
Trigger: TGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAACACTCACTCCCGCGTaGTTCACATTTAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKTLTPA*FTFSNQ
Trigger: TTGGTTGCTAAATGTGAATCACGCGGGAGTGAGTGT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCACACTCACTCCCGCGTaGTTCACATTTAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLTLTPA*FTFSNQ
Trigger: TTGGTTGCTAAATGTGAATCACGCGGGAGTGAGTGT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATACAGTGCCGAGCTGTaGTTGAAACTTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKYSAEL*LKLAKG
Trigger: ACCTTTGGCAAGTTTCAATCACAGCTCGGCACTGTA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAATAGATGTGCCCGTCTaGGATCCACGGTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSIDVPV*DPRCPD
Trigger: GTCAGGGCACCGTGGATCTCAGACGGGCACATCTAT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCGTTGGTTTGACTGCTaGCGGCTTTTCCGTATGAGT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSRWFDC*RLFRMS
Trigger: ACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCACTGGTGCCCAACCTaGACCGTAGCTCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPHWCPT*TVALLL
Trigger: AAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCACTGTGGGTTCGGCATaGAATTCACCGCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCTVGSA*NSPLLA
Trigger: AGCTAGAAGCGGTGAATTTCATGCCGAACCCACAGT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCCAGTTTGTGAGACGTTaGCTTCAGCAACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCQFVRR*LQQPGS
Trigger: TGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTG...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGGCATCCACAGTTTGTaGGACGTTGACTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCGIHSL*DVDFSN
Trigger: GTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAACATGGCCTGCTCCTTaGCCTGTTCTCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSTWPAP*PVLCGP
Trigger: AGGCCCACAGAGAACAGGGCAAGGAGCAGGCCATGT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTCCTGGGTATCTCGGTaGTGGGCTGCAGGAGAGATA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPSWVSR*WAAGEI
Trigger: TATCTCTCCTGCAGCCCAGCACCGAGATACCCAGGA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGCCAAAGGTGCTTTCTaGCTTGAAAATAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRAKGAF*LENRFL
Trigger: AAGGAATCTATTTTCAAGGCAGAAAGCACCTTTGGC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATTCCGAAGCACCTGCTaGCACCTTGTCTCGGCGATC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSFRSTC*HLVSAI
Trigger: GATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAA...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTCCTTCACAGGCGTCTaGAAACCTTTCGGGGACACC +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPSFTGV*KPFGDT
Trigger: GGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATGCACGATTTCATCCTaGCAAGAGTACCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKCTISS*QEYLMV
Trigger: CACCATCAGGTACTCTTGGCAGGATGAAATCGTGCA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTGAGTTTTATGTGCCTTaGAGCCTGGCTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSEFYVP*SLAHIL
Trigger: GAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTC...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGGGCCTAACTGGAGTTaGCTGACAGAAGTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIGPNWS*LTEVWV
Trigger: TACCCAGACTTCTGTCAGGCAACTCCAGTTAGGCCC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCTCACACCAACTGCCTaGTCATTCCTACTGTCCGCG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPLTPTA*SFLLSA
Trigger: CGCGGACAGTAGGAATGACCAGGCAGTTGGTGTGAG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGTTCTCTGTGGGCCTaGTCTCCTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSCSLWA*SPSPAE
Trigger: CTCTGCTGGGGAAGGAGACCAGGCCCACAGAGAACA...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTGGGTATCTCGGTGCTaGGCTGCAGGAGAGATATCC +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPWVSRC*AAGEIS
Trigger: GGATATCTCTCCTGCAGCCCAGCACCGAGATACCCA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTGTATCTCCGGCTTTTaGTCTGTCAGGGAATGTTTT +
Preference number: 4 (lower is better)
Translates to: CIHLSPLSSERPASHEWRCISGF*SVRECF
Trigger: AAAACATTCCCTGACAGACCAAAAGCCGGAGATACA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGAACATTTTCTCTTCTaGCTTTGTTCGGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: AQKDLHPMNGGLGKASLREHFLF*LCSDGF
Trigger: GAAACCATCCGAACAAAGCCAGAAGAGAAAATGTTC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGAACATTTTCTCTTCTaGCTTTGTTCGGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSEHFLF*LCSDGF
Trigger: GAAACCATCCGAACAAAGCCAGAAGAGAAAATGTTC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAATGTGCCTTGCAGCCTaGCTCACATCCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSMCLAA*LTSSST
Trigger: GGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACAT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACCACAGTCAGTGCGATaGTGCTGTGTTACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGPQSVR*CCVTGN
Trigger: ATTTCCAGTAACACAGCATCATCGCACTGACTGTGG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCGATAGGATTTGTTTCTaGATTCTGACGGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSDRICF*ILTACF
Trigger: AAAACATGCCGTCAGAATTCAGAAACAAATCCTATC...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGTGCCGAGCTGTGATTaGAACTTGCCAAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASVPSCD*NLPKVL
Trigger: AAGCACCTTTGGCAAGTTTCAATCACAGCTCGGCAC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTCTGTCTCTGGAGACTaGGTGAACTGCTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCSVSGD*VNCFRI
Trigger: TATCCTGAAGCAGTTCACTCAGTCTCCAGAGACAGA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGTCTCTGGAGACTaGGTGAACTGCTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSASVSGD*VNCFRI
Trigger: TATCCTGAAGCAGTTCACTCAGTCTCCAGAGACAGA...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTCGATGCTGATTAACTaGGAATGTGACATCGCTTTC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKSMLIN*ECDIAF
Trigger: GAAAGCGATGTCACATTCTCAGTTAATCAGCATCGA...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTAGTGGGTCCTTCATATaGCATTCGCTCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASSGSFI*HSLSPP
Trigger: TGGAGGACTGAGCGAATGTCATATGAAGGACCCACT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCTAACTGGAGTTGCCTaGCAGAAGTCTGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPLTGVA*QKSGYP
Trigger: TGGGTACCCAGACTTCTGTCAGGCAACTCCAGTTAG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCAACTCCACCTTGTCTaGAAGTGGAGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASQLHLV*KWSCEL
Trigger: CAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTGTCATTTCTGCCCCTaGTGTGTCCTCTGCACTATC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASCHFCP*CVLCTI
Trigger: GATAGTGCAGAGGACACATCAGGGGCAGAAATGACA...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCGMFST*SAQITI
Trigger: GATAGTGATCTGGGCTGAGCACGTTGAAAACATGCC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGACCATTCTCTGGAGCTaGACCTTCTTATCAAACATG +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKTILWS*TFLSNM
Trigger: CATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGCTTGCCGGTCCAGCTaGAGTCTGAGTATCGGCATT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSACRSS*SLSIGI
Trigger: AATGCCGATACTCAGACTGCAGCTGGACCGGCAAGC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCACTGTTATTCCCCAGTaGGCCACAGTCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPTVIPQ*ATVSAM
Trigger: CATCGCACTGACTGTGGCGCACTGGGGAATAACAGT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGCCTTCTCCTTCATCTaGTGGCTTTCTCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASAFSFI*WLSLCL
Trigger: GAGACAGAGAGAAAGCCAGCAGATGAAGGAGAAGGC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACACGTTGACGACCTTTaGTCTCCCCTCCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSHVDDL*SPLPPF
Trigger: AAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCEITDL*STILWS
Trigger: GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCAGTCTGATAGGAACTaGCCACTCCAGAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIQSDRN*PLQKRA
Trigger: TGCCCTTTTCTGGAGTGGCCAGTTCCTATCAGACTG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 4 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACTTGCAGAGAACCAGTaGCATCACTGGTGCCCAACC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSLAENQ*HHWCPT
Trigger: GGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGGGTGTTCATCTGGAGTaGACACAAAATAACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKGVHLE*TQNNSA
Trigger: AGCAGAGTTATTTTGTGTCCACTCCAGATGAACACC...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCCACCACTTCTGCAGTaGGTCCTTCATATGACATTC +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSPPLLQ*VLHMTF
Trigger: GAATGTCATATGAAGGACCCACTGCAGAAGTGGTGG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCAAGCACAAATGTTCTaGACACGGGTCCACGGATGG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPQAQMF*TRVHGW
Trigger: CCATCCGTGGACCCGTGTCCAGAACATTTGTGCTTG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTGCAAGCCATGTCTGTaGCCAGGTGCAAAACATAGA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVICKPCL*PGAKHR
Trigger: TCTATGTTTTGCACCTGGTCACAGACATGGCTTGCA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAACACCCCAACTGCAATaGCTTCTGTTCAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGTPQLQ*LLFKVQ
Trigger: TTGCACTTTGAACAGAAGTCATTGCAGTTGGGGTGT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTCCTCCACTTATCAATaGAGAAAACGTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSSSTYQ*RKRALQ
Trigger: CTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTACACTGACATCAAACTaGGCCCACTTAGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASTLTSN*AHLDSS
Trigger: TGAGGAGTCTAAGTGGGCTCAGTTTGATGTCAGTGT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACATGAGCCCAGACACTaGCATCAAACTGAGCCCACT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSHEPRH*HQTEPT
Trigger: AGTGGGCTCAGTTTGATGTCAGTGTCTGGGCTCATG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTACAGTGCCGAGCTGTaGTTGAAACTTGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIYSAEL*LKLAKG
Trigger: ACCTTTGGCAAGTTTCAATCACAGCTCGGCACTGTA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAAGTCTGGGTACCCACTaGCTCTTCTGTTGCAAAATA +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSLGTH*LFCCKI
Trigger: TATTTTGCAACAGAAGAGTCAGTGGGTACCCAGACT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCACCATTCTCTGGAGCTaGACCTTCTTATCAAACATG +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLTILWS*TFLSNM
Trigger: CATGTTTGATAAGAAGGTGCAGCTCCAGAGAATGGT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCATCTACCCTACCAGTaGCAGGGAACCTGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPHLPYQ*QGTCAN
Trigger: ATTTGCACAGGTTCCCTGGCACTGGTAGGGTAGATG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACCGTATGAGTTTTCCTaGTGGGTAGTGGCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSPYEFS*WVVAEE
Trigger: TTCCTCGGCCACTACCCAGCAGGAAAACTCATACGG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTATGTCTCCTATCATCTaGTCGGCTGACTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIMSPII*SADLPF
Trigger: GAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACAT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCGCTGTGAACTGGATTTaGCCACTGAACCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCAVNWI*PLNPSL
Trigger: TAAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGC...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCGCCTTAGCGTTCTGCTaGTGTCTGCTAACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPALAFC*CLLTCL
Trigger: TAGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGC...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCAAAGCTTCCGTGAGGTaGGTTCATGGTTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLKASVR*VHGCYC
Trigger: ACAATAACAACCATGAACCCACCTCACGGAAGCTTT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAACTCGCGGGCAATTGTaGAATCTTCACCTATGTAAA +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKTRGQL*NLHLCK
Trigger: TTTACATAGGTGAAGATTCCACAATTGCCCGCGAGT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCCCGGGGTGTTCATCTaGAGTGGACACAAAATAACT +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASPGVFI*SGHKIT
Trigger: AGTTATTTTGTGTCCACTCCAGATGAACACCCCGGG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAACTATAAAGGAAATTaGCCATGCCGGGAGTACTCT +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCNYKGN*PCREYS
Trigger: AGAGTACTCCCGGCATGGTCAATTTCCTTTATAGTT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCACACTGACATCAAACTaGGCCCACTTAGACTCCTCA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPTLTSN*AHLDSS
Trigger: TGAGGAGTCTAAGTGGGCTCAGTTTGATGTCAGTGT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGACCAACAATAGCTCATaGGTCCATACTTGTAAATAC +
Preference number: 4 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKTNNSS*VHTCKY
Trigger: GTATTTACAAGTATGGACTCATGAGCTATTGTTGGT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCCTCTTGTGTGCAGAGTaGCTGATTTTAAAGGACATG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCLLCAE*LILKDM
Trigger: CATGTCCTTTAAAATCAGTCACTCTGCACACAAGAG...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCCACCAGTAGGAAACTaGAAAACACTCAGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASPPVGN*KTLSEY
Trigger: GTACTCACTGAGTGTTTTTCAGTTTCCTACTGGTGG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGCACAGTCCACTGTGTaGTTCCAATTTTCCTGTACA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIAQSTV*FQFSCT
Trigger: TGTACAGGAAAATTGGAAGCACACAGTGGACTGTGC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATCAATGAAGAAAACGTaGTCTCCAGAAACTACCTGC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSMKKT*SPETTC
Trigger: GCAGGTAGTTTCTGGAGAGCACGTTTTCTTCATTGA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGCCAAAGGTGCTTTCTaGCTTGAAAATAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKAKGAF*LENRFL
Trigger: AAGGAATCTATTTTCAAGGCAGAAAGCACCTTTGGC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAAAAGAATCAGCAGATaGTTCTGTCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCKRISR*FCLWRL
Trigger: CAGTCTCCAGAGACAGAAGCATCTGCTGATTCTTTT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTAAAAGAATCAGCAGATaGTTCTGTCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAKRISR*FCLWRL
Trigger: CAGTCTCCAGAGACAGAAGCATCTGCTGATTCTTTT...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCATGTCTCCTATCATCTaGTCGGCTGACTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPMSPII*SADLPF
Trigger: GAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACAT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTGCACGATTTCATCCTaGCAAGAGTACCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPCTISS*QEYLMV
Trigger: CACCATCAGGTACTCTTGGCAGGATGAAATCGTGCA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTGGTCTACCATTCTCTaGAGCTGCACCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIWSTIL*SCTFLS
Trigger: TGATAAGAAGGTGCAGCTCCAGAGAATGGTAGACCA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAAATAAACTGTTTCCCTaGACAAAACACCCCAACTGC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGNKLFP*TKHPNC
Trigger: GCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTATT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTACTCGCGGGCAATTGTaGAATCTTCACCTATGTAAA +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSTRGQL*NLHLCK
Trigger: TTTACATAGGTGAAGATTCCACAATTGCCCGCGAGT...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCTGGCTTTGTTCGGATaGTTTCTGGTCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSALALFG*FLVCFF
Trigger: AAAGAAACAGACCAGAAACCATCCGAACAAAGCCAG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCTGGCTTTGTTCGGATaGTTTCTGGTCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSLALFG*FLVCFF
Trigger: AAAGAAACAGACCAGAAACCATCCGAACAAAGCCAG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAAGTGACTTTTGTGTCTaGAAAAGAATCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSDFCV*KRISRC
Trigger: GCATCTGCTGATTCTTTTCCAGACACAAAAGTCACT...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATCAGAAACGACACTTTaGAAGGTGCTCTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGSETTL*KVLFSV
Trigger: GACTGAAAAGAGCACCTTCCAAAGTGTCGTTTCTGA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTTCATCTTTCACCCTTaGGCTCAGAAAGACCTGCAT +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPFIFHP*AQKDLH
Trigger: ATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTCCTCCACTTATCAATaGAGAAAACGTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPSSTYQ*RKRALQ
Trigger: CTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTCTCTTGTGTGCAGAGTaGCTGATTTTAAAGGACATG +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASLLCAE*LILKDM
Trigger: CATGTCCTTTAAAATCAGTCACTCTGCACACAAGAG...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCTGAAAAACACTCAGTaGGTACTGTTTTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSLKNTQ*VLFCLS
Trigger: ACTGAGACAAAACAGTACTCACTGAGTGTTTTTCAG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSGMFST*SAQITI
Trigger: GATAGTGATCTGGGCTGAGCACGTTGAAAACATGCC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAGAAATCACCGACCTTTaGTCTACCATTCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSEITDL*STILWS
Trigger: GCTCCAGAGAATGGTAGACCAAAGGTCGGTGATTTC...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCGTGAGGTGGGTTCATaGTTGTTATTGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAREVGS*LLLYSS
Trigger: AGATGAATACAATAACAACCATGAACCCACCTCACG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTACTCGCGGGCAATTGTaGAATCTTCACCTATGTAAA +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASTRGQL*NLHLCK
Trigger: TTTACATAGGTGAAGATTCCACAATTGCCCGCGAGT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCAGTGACTTTTGTGTCTaGAAAAGAATCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCSDFCV*KRISRC
Trigger: GCATCTGCTGATTCTTTTCCAGACACAAAAGTCACT...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATCCTCCACTTATCAATaGAGAAAACGTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSSSTYQ*RKRALQ
Trigger: CTGGAGAGCACGTTTTCTTCATTGATAAGTGGAGGA...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTCTGAAAAACACTCAGTaGGTACTGTTTTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVILKNTQ*VLFCLS
Trigger: ACTGAGACAAAACAGTACTCACTGAGTGTTTTTCAG...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTGATAGGATTTGTTTCTaGATTCTGACGGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSDRICF*ILTACF
Trigger: AAAACATGCCGTCAGAATTCAGAAACAAATCCTATC...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTTACTCACATCCATCTaGAAGGTAAACGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HILVTFPIVGNRSLAKSALLTSI*KVNEVS
Trigger: AGAAACTTCGTTTACCTTTCAGATGGATGTGAGTAA...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGAACATTTTCTCTTCTaGCTTTGTTCGGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIEHFLF*LCSDGF
Trigger: GAAACCATCCGAACAAAGCCAGAAGAGAAAATGTTC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTACCAACAATAGCTCATaGGTCCATACTTGTAAATAC +
Preference number: 4 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASTNNSS*VHTCKY
Trigger: GTATTTACAAGTATGGACTCATGAGCTATTGTTGGT...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTACCAACAATAGCTCATaGGTCCATACTTGTAAATAC +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVITNNSS*VHTCKY
Trigger: GTATTTACAAGTATGGACTCATGAGCTATTGTTGGT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR GCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCACAAAACACCCCAACTaGAATGACTTCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPTKHPN*NDFCSK
Trigger: CTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCCAGATCACTATCTCTaGATTACTTTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VIILITCSHQLPFTSHEPPDHYL*ITFSFQ
Trigger: TTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGTGAAATTAAATGTTTaGGTGCTAAGGGATAAGGTG +
Preference number: 4 (lower is better)
Translates to: SHCREQEFSKISFLDDVIVKLNV*VLRDKV
Trigger: CACCTTATCCCTTAGCACCCAAACATTTAATTTCAC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR TCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAATCTCCTTTTCAGCATaGAATTGTCTGCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSISFSA*NCLQPN
Trigger: ATTTGGCTGCAGACAATTTCATGCTGAAAAGGAGAT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACCAGATCACTATCTCTaGATTACTTTCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSPDHYL*ITFSFQ
Trigger: TTGGAAGGAGAAAGTAATCCAGAGATAGTGATCTGG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CCA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCACGTGAGGTGGGTTCATaGTTGTTATTGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: EVGHNINYLFTSASIYKSREVGS*LLLYSS
Trigger: AGATGAATACAATAACAACCATGAACCCACCTCACG...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp AGGCGTGGCGGCGGCGCGGCGGGGCCGGTGGCGCGGGCGCGGAAATaGATGGTAAGGCTGGCGGCGCGCGCGCGCAGCTCCCTCACGTCG +
Preference number: 5 (lower is better)
Translates to: RRGGGAAGPVARARK*MVRLAARARSSLTS
Trigger: CGACGTGAGGGAGCTGCGCGCGCGCGCCGCCAGCCTTACCATGCATTTCCGCGCCCGCGCCACCGGCCCCGCCGCGCCGCCGCCACGCCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp CGCTCGCCCTCCGCCAGCGCAGTGGCCCAGCTCAGCTCGTCCAGCTaGTGCCGCAAGCTGCGCGCCTCCTCGGCGCAGCGGGCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RSPSASAVAQLSSSS*CRKLRASSAQRACP
Trigger: GGGGCAGGCCCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGGGCGAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp TCGCCCTCCGCCAGCGCAGTGGCCCAGCTCAGCTCGTCCAGCTGCTaGCGCAAGCTGCGCGCCTCCTCGGCGCAGCGGGCCTGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SPSASAVAQLSSSSC*RKLRASSAQRACPS
Trigger: CGAGGGGCAGGCCCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGAGGGCGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 90 bp GCCGGGCGTGCGGGGTTCTCGCGGCTGGCCGGCTCCCTCCTGCCCTaGTCTTGTCCCGGTCTCGTCCTCTCCGCCGCGACGCTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: AGRAGFSRLAGSLLP*SCPGLVLSAATLRP
Trigger: AGGCCGGAGCGTCGCGGCGGAGAGGACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 90 bp CTCGGCCACCAGCAGTGCGTAGCTGTCGTGCACCTCCCGCAGGCGTaGCGGCGGCGCGGCGGGGCCGGTGGCGCGGGCGCGGAAATGCAT +
Preference number: 5 (lower is better)
Translates to: LGHQQCVAVVHLPQA*RRRGGAGGAGAEMH
Trigger: ATGCATTTCCGCGCCCGCGCCACCGGCCCCGCCGCGCCGCCGCCACGCCTGCGGGAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp CGCGCGCAGCTGCTCCAACCCGAGCGCCTCGCGCCGCAGCGCCTCTaGCTCCTGCGCGCACAGCCGCGTCTCTTCCTCCGCCTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RAQLLQPERLAPQRL*LLRAQPRLFLRLES
Trigger: AGACTCCAGGCGGAGGAAGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCTGCGGCGCGAGGCGCTCGGGTTGGAGCAGCTGCGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp TCTCGGGGCCCGTCTGCAGCCGCCAGGACAGCATCTTGCCGGGCGTaGGGGGTTCTCGCGGCTGGCCGGCTCCCTCCTGCCCTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SRGPSAAARTASCRA*GVLAAGRLPPALVL
Trigger: CAAGACCAGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp CTCGTACAGCTGCACCGTCTCCCGCCACGACTCGGCCACCAGCAGTaGGTAGCTGTCGTGCACCTCCCGCAGGCGTGGCGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: LVQLHRLPPRLGHQQ*VAVVHLPQAWRRRG
Trigger: GCCGCGCCGCCGCCACGCCTGCGGGAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAGTCGTGGCGGGAGACGGTGCAGCTGTACGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 90 bp AGCGCCTCTGCCTCCTGCGCGCACAGCCGCGTCTCTTCCTCCGCCTaGAGTCTGCTCTCCTGGCCGCGCCGCAGCGCCTCCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SASASCAHSRVSSSA*SLLSWPRRSASSSS
Trigger: CGAGCTGGAGGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGGAAGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCT
73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp AGCCGGGCGTTGAGCTCCTGGAGCTCGGCCTTCTCGGGGCCCGTCTaGAGCCGCCAGGACAGCATCTTGCCGGGCGTGCGGGGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: SRALSSWSSAFSGPV*SRQDSILPGVRGSR
Trigger: GCGAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 90 bp AGCCGCCAGGACAGCATCTTGCCGGGCGTGCGGGGTTCTCGCGGCTaGCCGGCTCCCTCCTGCCCTGGTCTTGTCCCGGTCTCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SRQDSILPGVRGSRG*PAPSCPGLVPVSSS
Trigger: AGAGGACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS TCA 90 bp GCTCCAGCTCCCGCACCCGACACACGTAGTCATAGAGCCGGGCGTTaGGCTCCTGGAGCTCGGCCTTCTCGGGGCCCGTCTGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: APAPAPDTRSHRAGR*APGARPSRGPSAAA
Trigger: GGCGGCTGCAGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATGACTACGTGTGTCGGGTGCGGGAGCTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 90 bp AGCCGGGGCCTCCGCTCCACCTTCCTCATCTGGGCTGCCAGGCGCTaGGCTGCGTTGCCTGCTCAGGCTCTCCCGAACCACCGACTCCAC +
Preference number: 5 (lower is better)
Translates to: SRGLRSTFLIWAARR*AALPAQALPNHRLH
Trigger: GTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAGCGGAGGCCCCGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GGGCCTCCGCTCCACCTTCCTCATCTGGGCTGCCAGGCGCTGGGCTaGGTTGCCTGCTCAGGCTCTCCCGAACCACCGACTCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: GPPLHLPHLGCQALG*VACSGSPEPPTPQP
Trigger: AGGCTGTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAGCGGAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp AAAGCGAATGCCAGCAGCCGGGGCCTCCGCTCCACCTTCCTCATCTaGGCTGCCAGGCGCTGGGCTGCGTTGCCTGCTCAGGCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: KANASSRGLRSTFLI*AARRWAALPAQALP
Trigger: CGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAGCGGAGGCCCCGGCTGCTGGCATTCGCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GCGGACAGCTCCTCCCTCATGCGCTCGGGAAGGGTTTCCTCCAGCTaGCCGATGACCTCCACCAGCTGCTGCCGGGGCTCCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ADSSSLMRSGRVSSS*PMTSTSCCRGSLEE
Trigger: CTCCTCCAAGGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCTTCCCGAGCGCATGAGGGAGGAGCTGTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp CAGCAACCAGGGTCACGGAACTGCCACCAGCACCCTGGACCTTCTTaGCATCCACGGAAACGCTCCCCGGCCCACCCTGCCCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QQPGSRNCHQHPGPS*HPRKRSPAHPAPLW
Trigger: CCAGAGAGGGGCAGGGTGGGCCGGGGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp CTGTCCCGAGCTGTGAGAGGCCCCACCAGCAACCTCGCTCTCGCCTaGAGGGATGTACAGCTCCCGGGTGGCCCAACGCCTAAAGCGAAT +
Preference number: 5 (lower is better)
Translates to: LSRAVRGPTSNLALA*RDVQLPGGPTPKAN
Trigger: ATTCGCTTTAGGCGTTGGGCCACCCGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTTGCTGGTGGGGCCTCTCACAGCTCGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GTGACATGCCTCACAGACCGGCTGGCTCCGGTCGGGCTCGCTGCCTaGCTTAGGTCACCTCCCGCACTTACCTCCACCACTTCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VTCLTDRLAPVGLAA*LRSPPALTSTTSAV
Trigger: CACTGCAGAAGTGGTGGAGGTAAGTGCGGGAGGTGACCTAAGTCAGGCAGCGAGCCCGACCGGAGCCAGCCGGTCTGTGAGGCATGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp GCAGGGGCAGGGCCTAGGAAGATGACTTCTCTGGACAGTGGACTTTaGCCGGGACCCAGCGTGACATGCCTCACAGACCGGCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: AGAGPRKMTSLDSGL*PGPSVTCLTDRLAP
Trigger: CGGAGCCAGCCGGTCTGTGAGGCATGTCACGCTGGGTCCCGGTCAAAGTCCACTGTCCAGAGAAGTCATCTTCCTAGGCCCTGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp ATTCCTACTGTCCGCGTCTCTCCAGGAACCACGGTCAGACACACCGAGAGCTCCCGCCAGGACAGCATCTaGCCGGGCGTGCGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: IPTVRVSPGTTVRHTESSRQDSI*PGVRGS
Trigger: AGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCG...GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGCGGACAGTAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS-3UTR CAA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCATCTGCTCGGCTGACTaGCCTTTCAGCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAICSAD*PFSPTS
Trigger: GGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGAT...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp TCGGGAAGGGTTTCCTCCAGCTGCCCGATGACCTCCACCAGCTGCTaGCGGGGCTCCTTGGAGGAGATGCCCTTCATGGAGGTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SGRVSSSCPMTSTSC*RGSLEEMPFMEVWN
Trigger: ATTCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCTTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCGCCAGGACAGCATCTaGCCGGGCGTGCGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMRQDSI*PGVRGS
Trigger: AGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CAA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCAAACGGGGACCTCCCTaGTATCTCCGGCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAKRGPP*YLRLLV
Trigger: GACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTT...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCCAGGAGGCTGTCACCTaGACCAAATTCTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAQEAVT*TKFSPV
Trigger: GACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTG...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GCAGGAGGTCCTGATAGTCCCGCAGCCAGTCAGCCATGGCCAAGGTaGGGGTTGCCTTCTCATCCTCCAGGCAGTCAATCACTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AGGPDSPAASQPWPR*GLPSHPPGSQSLSA
Trigger: GGCAGAGAGTGATTGACTGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTGACTGGCTGCGGGACTATCAGGACCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 90 bp AGAGGGCGCTGGGACATCCAAGGGCTTCACAACCTTCTCGCCCACTaGACCGTCCTTCTGTGTCCTCCTTCGAGTCCCCTGCACGATTTC +
Preference number: 5 (lower is better)
Translates to: RGRWDIQGLHNLLAH*TVLLCPPSSPLHDF
Trigger: GAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGGTGCAGTGGGCGAGAAGGTTGTGAAGCCCTTGGATGTCCCAGCGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp TGTGAGTGGCCTGGTGCACATCTGCTGAGCCCTCTCCGTGCACAGTaGTCTCTGAGTCACCAGATTCCCCCAGTTGGGGAACCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: CEWPGAHLLSPLRAQ*SLSHQIPPVGEPAH
Trigger: ATGGGCTGGTTCCCCAACTGGGGGAATCTGGTGACTCAGAGAGCACTGTGCACGGAGAGGGCTCAGCAGATGTGCACCAGGCCACTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 90 bp GTCCTCCAGACTTCAGAGGGGCCGAGTTTTATGTGCCTTGCAGCCTaGCTCACATCCTCCAGCACCTGTGACTGGGCAAAGCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: VLQTSEGPSFMCLAA*LTSSSTCDWAKPVG
Trigger: CCCCACAGGCTTTGCCCAGTCACAGGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGTCTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp AACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTACTCACATCCATCTCCACCACTTCTG +
Preference number: 5 (lower is better)
Translates to: NHGQTHRELPLPVSG*GSPLRYSHPSPPLL
Trigger: CAGAAGTGGTGGAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp CACACCGCACTCAGCAAGTGCTGGTCATCTTCATGGGAGAGGTCCTaGAGCCCAGAATCACATGGAGCCCACCGGTCAGAGGTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: HTALSKCWSSSWERS*SPESHGAHRSEVCL
Trigger: GAGACAGACCTCTGACCGGTGGGCTCCATGTGATTCTGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CAA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCATACAAAAAGACTGGTaGTGTTCCGGCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAIQKDW*CSGPIQ
Trigger: TTGGATGGGGCCGGAACACAACCAGTCTTTTTGTAT...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGTCTGGACAGTGGACTTaGACCGGGACCCAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMSGQWT*TGTQRD
Trigger: GTCACGCTGGGTCCCGGTCAAAGTCCACTGTCCAGA...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp TGGAATCGCCTTGCAGAGAACCAGTGGCATCACTGGTGCCCAACCTaGACCGTAGCTCTCTTGCTTCTGCCTCTCTACCGGTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: WNRLAENQWHHWCPT*TVALLLLPLYRSHH
Trigger: GTGGTGGGACCGGTAGAGAGGCAGAAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAGGCGATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GCTCCTCCAGGTCTAACCGATCGGCATCCACAGTTTGTGAGACGTTaGCTTCAGCAACCAGGGTCACGGAACTGCCACCAGCACCCTGGA +
Preference number: 5 (lower is better)
Translates to: APPGLTDRHPQFVRR*LQQPGSRNCHQHPG
Trigger: TCCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCCGATCGGTTAGACCTGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GCAGGAGGTCCTGATAGTCCCGCAGCCAGTCAGCCATGGCCAAGGTaGGGGTTGCCTTCTCATCCTCCAGGCAGTCAATCACTCTCTTAC +
Preference number: 5 (lower is better)
Translates to: AGGPDSPAASQPWPR*GLPSHPPGSQSLSY
Trigger: GTAAGAGAGTGATTGACTGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTGACTGGCTGCGGGACTATCAGGACCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS GCA 90 bp AACCACGGTCAGACACACCGAGAGCTCCCGCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTACTCACATCCATCTGACGGCATGTTT +
Preference number: 5 (lower is better)
Translates to: NHGQTHRELPLPVSG*GSPLRYSHPSDGMF
Trigger: AAACATGCCGTCAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTGACCGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS GCA 90 bp TCTGCCTCTCTACCGGTCCCACCACCAGCATCCTTCACAGGCGTCTaGAAACCTTTCGGGGACACCTCTGCTCTTCTGTCCTGGGATACT +
Preference number: 5 (lower is better)
Translates to: SASLPVPPPASFTGV*KPFGDTSALLSWDT
Trigger: AGTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAAGGTTTGCAGACGCCTGTGAAGGATGCTGGTGGTGGGACCGGTAGAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GACATAACTCACGGGCTCCTCCACGATCTCCACGTTGACGACCTTTaGTCTCCCCTCCCTCCCTTTCAGGCCGAGGTTGATGATGTCTCC +
Preference number: 5 (lower is better)
Translates to: DITHGLLHDLHVDDL*SPLPPFQAEVDDVS
Trigger: GGAGACATCATCAACCTCGGCCTGAAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGAGGAGCCCGTGAGTTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GACATTCGCTCAGTCCTCCAGACTTCAGAGGGGCCGAGTTTTATGTaGCTTGCAGCCTGGCTCACATCCTCCAGCACCTGTGACTGGGCA +
Preference number: 5 (lower is better)
Translates to: DIRSVLQTSEGPSFM*LAAWLTSSSTCDWA
Trigger: TGCCCAGTCACAGGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGAGCGAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp CTGCCACCTTGTCTCGGCGATCCCGGTACGACTCGCGGGCAATTGTaGAATCTTCACCTATGTAAACGGGGACCTCCCTTGTATCTCCGG +
Preference number: 5 (lower is better)
Translates to: LPPCLGDPGTTRGQL*NLHLCKRGPPLYLR
Trigger: CCGGAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp CACAAGACTTGGCACACCGCACTCAGCAAGTGCTGGTCATCTTCATaGGAGAGGTCCTGGAGCCCAGAATCACATGGAGCCCACCGGTCA +
Preference number: 5 (lower is better)
Translates to: HKTWHTALSKCWSSS*ERSWSPESHGAHRS
Trigger: TGACCGGTGGGCTCCATGTGATTCTGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CAA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAGCACCTGCTGCCACCTaGTCTCGGCGATCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKAPAAT*SRRSRY
Trigger: GTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGC...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTTCGACCTCCTCCACTTaGAATGGGACGGAAAACTCC +
Preference number: 5 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSSTSST*NGTENS
Trigger: GGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCGA...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCGCCCCTTCACCGCTTCTAGCTaGTTCTTTCCAGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: LSTGPHSAAHEHGGLSRPFTASS*FFPVSG
Trigger: TCCACTCACTGGAAAGAACAAGCTAGAAGCGGTGAA...GGGGCGAGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTCGGTGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTCAGTCATAACGGTTaGTCTACCCGAGGTATGACT +
Preference number: 5 (lower is better)
Translates to: LGGAYLQVHTPRPMSMGAFSHNG*STRGMT
Trigger: AGTCATACCTCGGGTAGACAAACCGTTATGACTGAA...GGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp TCCTCCTTCGAGTCCCCTGCACGATTTCATCCTGCCAAGAGTACCTaGTGGTGGATTCCTCCTCGATGTGGATCTGCCCGTACACCGAGC +
Preference number: 5 (lower is better)
Translates to: SSFESPARFHPAKST*WWIPPRCGSARTPS
Trigger: GCTCGGTGTACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp TTCTCGCCCACTGCACCGTCCTTCTGTGTCCTCCTTCGAGTCCCCTaGACGATTTCATCCTGCCAAGAGTACCTGATGGTGGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSPTAPSFCVLLRVP*TISSCQEYLMVDSS
Trigger: GGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGGTGCAGTGGGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGCACCTGCTGCCACCTaGTCTCGGCGATCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTAPAAT*SRRSRY
Trigger: GTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCTGCTCGGCTGACTaGCCTTTCAGCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNICSAD*PFSPTS
Trigger: GGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGAT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp CCCAAGAAGCCTCTTCTGGCATCACCTCCAATAGATGTGCCCGTCTaGGATCCACGGTGCCCTGACAGGTTAGAATACAGTGCCGAGCTG +
Preference number: 5 (lower is better)
Translates to: PKKPLLASPPIDVPV*DPRCPDRLEYSAEL
Trigger: CAGCTCGGCACTGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGAGGTGATGCCAGAAGAGGCTTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp CCGTCCTTCTGTGTCCTCCTTCGAGTCCCCTGCACGATTTCATCCTaGCAAGAGTACCTGATGGTGGATTCCTCCTCGATGTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: PSFCVLLRVPCTISS*QEYLMVDSSSMWIC
Trigger: GCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GCCCTGGTGCAATGTGCCTTAGCGTTCTGCTGCTGTCTGCTAACTTaGCTAGCTCAGGGGAGTCCGCTGAACCAGCAAGCACAAATGTTC +
Preference number: 5 (lower is better)
Translates to: ALVQCALAFCCCLLT*LAQGSPLNQQAQMF
Trigger: GAACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACATTGCACCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 90 bp ACGAAGTTTCTTTGGGCCCTGGTGCAATGTGCCTTAGCGTTCTGCTaGTGTCTGCTAACTTGCCTAGCTCAGGGGAGTCCGCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: TKFLWALVQCALAFC*CLLTCLAQGSPLNQ
Trigger: CTGGTTCAGCGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACATTGCACCAGGGCCCAAAGAAACTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 90 bp ACAGGCGTCTGCAAACCTTTCGGGGACACCTCTGCTCTTCTGTCCTaGGATACTTCTAGACTAATCGGCACCTCTCTCTCTCGCACGCTC +
Preference number: 5 (lower is better)
Translates to: TGVCKPFGDTSALLS*DTSRLIGTSLSRTL
Trigger: GAGCGTGCGAGAGAGAGAGGTGCCGATTAGTCTAGAAGTATCCCAGGACAGAAGAGCAGAGGTGTCCCCGAAAGGTTTGCAGACGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TGGTGCCTATCTACAGGTCCACACTCCGCGGCCCATGAGCATGGGGGCCTTTCTCCCATGAATGGAGGGTaGGGAAAGGCATCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: WCLSTGPHSAAHEHGGLSPMNGG*GKASLR
Trigger: TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGG...AGAAAGGCCCCCATGCTCATGGGCCGCGGAGTGTGGACCTGTAGATAGGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGCACCCTGGACCTTCTaGACATCCACGGAAACGCTC +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSAPWTF*TSTETL
Trigger: GAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGACACCCAACTCCACCTaGTCTGAAAGTGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMTPNST*SESGAV
Trigger: CACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp CAATCACTCTCTTACCCACTTTGCCACACTGCCCGTTACGCTGTGTaGGACGTGTTGCACAAGACTTGGCACACCGCACTCAGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: QSLSYPLCHTARYAV*DVLHKTWHTALSKC
Trigger: GCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAAAGTGGGTAAGAGAGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS GCA 90 bp CTTACCCACTTTGCCACACTGCCCGTTACGCTGTGTGAGACGTGTTaGACAAGACTTGGCACACCGCACTCAGCAAGTGCTGGTCATCTT +
Preference number: 5 (lower is better)
Translates to: LTHFATLPVTLCETC*TRLGTPHSASAGHL
Trigger: AAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAAAGTGGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CCA 90 bp CCTGACTTAGGTCACCTCCCGCACTTACCTCCACCACTTCTGCAGTaGGTCCTTCATATGACATTCGCTCAGTCCTCCAGACTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: PDLGHLPHLPPPLLQ*VLHMTFAQSSRLQR
Trigger: CCTCTGAAGTCTGGAGGACTGAGCGAATGTCATATGAAGGACCCACTGCAGAAGTGGTGGAGGTAAGTGCGGGAGGTGACCTAAGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 90 bp CCTCTGAGGCCCAATGCTGATGTGCCTGATGGATGTGCTGCTCCCTaGCAACCCTTCCATGTGTACAGAATCTCCTATGACACCCAACTC +
Preference number: 5 (lower is better)
Translates to: PLRPNADVPDGCAAP*QPFHVYRISYDTQL
Trigger: GAGTTGGGTGTCATAGGAGATTCTGTACACATGGAAGGGTTGCCAGGGAGCAGCACATCCATCAGGCACATCAGCATTGGGCCTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 90 bp TGCCTAGCTCAGGGGAGTCCGCTGAACCAGCAAGCACAAATGTTCTaGACACGGGTCCACGGATGGCAATGTGTTCAGAGGTTTCCGTTT +
Preference number: 5 (lower is better)
Translates to: CLAQGSPLNQQAQMF*TRVHGWQCVQRFPF
Trigger: AAACGGAAACCTCTGAACACATTGCCATCCGTGGACCCGTGTCCAGAACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTGAGCTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAAACGGGGACCTCCCTaGTATCTCCGGCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSKRGPP*YLRLLV
Trigger: GACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGACGACTCGCGGGCAATaGTGGAATCTTCACCTATGT +
Preference number: 5 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMTTRGQ*WNLHLC
Trigger: ACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGT...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTTCCACGATCTCCACGTaGACGACCTTTGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTSTIST*TTFALP
Trigger: GGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGA...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp ACCTCCCGCACTTACCTCCACCACTTCTGCAGTGGGTCCTTCATATaGCATTCGCTCAGTCCTCCAGACTTCAGAGGGGCCGAGTTTTAT +
Preference number: 5 (lower is better)
Translates to: TSRTYLHHFCSGSFI*HSLSPPDFRGAEFY
Trigger: ATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGAGCGAATGTCATATGAAGGACCCACTGCAGAAGTGGTGGAGGTAAGTGCGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 90 bp CCCTCCCTCCCTTTCAGGCCGAGGTTGATGATGTCTCCTATCATCTaGTCGGCTGACTTGCCTTTCAGCCCCACTTCCTTAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: PSLPFRPRLMMSPII*SADLPFSPTSLISL
Trigger: CAAGGATATTAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCTCGGCCTGAAAGGGAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAACGCCAGGACAGCATCTaGCCGGGCGTGCGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKRQDSI*PGVRGS
Trigger: AGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCG...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAAAAACGGGGACCTCCCTaGTATCTCCGGCTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKKRGPP*YLRLLV
Trigger: GACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTT...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GGCATCACCTCCAATAGATGTGCCCGTCTGAGATCCACGGTGCCCTaGCAGGTTAGAATACAGTGCCGAGCTGTGATTGAAACTTGCCAA +
Preference number: 5 (lower is better)
Translates to: GITSNRCARLRSTVP*QVRIQCRAVIETCQ
Trigger: TTGGCAAGTTTCAATCACAGCTCGGCACTGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGAGGTGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp GGGGTGTTCATCTGGAGTGGACACAAAATAACTCTGCTCGCCCTCTaGATCACCTGCCTCTGTCACTTCTTCCACGTGAGTCGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GVFIWSGHKITLLAL*ITCLCHFFHVSRVL
Trigger: GAGAACACGACTCACGTGGAAGAAGTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGTTATTTTGTGTCCACTCCAGATGAACACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp CTTTTCAGCATGAAATTGTCTGCAGCCAAATGTGCTGTGCCTCCCTaGTCCGTCCATATCTGCAGAAGACTCTGCTGGGCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LFSMKLSAAKCAVPP*SVHICRRLCWARFW
Trigger: CCAGAACCTGGCCCAGCAGAGTCTTCTGCAGATATGGACGGATCAGGGAGGCACAGCACATTTGGCTGCAGACAATTTCATGCTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp TCCTGTGTCCGGCTGCGGATCGCCTCTACGTTACTCACATCCATCTaGAAGGTAAACGAAGTTTCTTTGGGCCCTGGTGCAATGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SCVRLRIASTLLTSI*KVNEVSLGPGAMCL
Trigger: AAGGCACATTGCACCAGGGCCCAAAGAAACTTCGTTTACCTTTCAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 90 bp CTGGTAACGATGTTTTCTGCTACGGTTTCTGTCATGGAATCGCCTTaGAGAGAACCAGTGGCATCACTGGTGCCCAACCTGAACCGTAGC +
Preference number: 5 (lower is better)
Translates to: LVTMFSATVSVMESP*REPVASLVPNLNRS
Trigger: GCTACGGTTCAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAGCAGAAAACATCGTTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CAGCCAGCTTGCCGGTCCAGCTGCAGTCTGAGTATCGGCATTCTCTTCATTGTCTCGGCATTCTCTTCATaGTCTTCAAGGTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: QPACRSSCSLSIGILFIVSAFSS*SSRSTS
Trigger: GGAGGTAGACCTTGAAGACAATGAAGAGAATGCCGA...GACAATGAAGAGAATGCCGATACTCAGACTGCAGCTGGACCGGCAAGCTGGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTCGGCATTCTCTTCATaGTCTTCAAGGTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNSAFSS*SSRSTS
Trigger: GGAGGTAGACCTTGAAGACAATGAAGAGAATGCCGA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATACAAAAAGACTGGTaGTGTTCCGGCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNIQKDW*CSGPIQ
Trigger: TTGGATGGGGCCGGAACACAACCAGTCTTTTTGTAT...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGTTCTGACGTTGGTTaGACTGCTGACGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSSSDVG*TADGFS
Trigger: GGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAACT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCCCTTTCAGGCCGAGGTaGATGATGTCTCCTATCATC +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSPFRPR*MMSPII
Trigger: GATGATAGGAGACATCATCAACCTCGGCCTGAAAGG...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGATCCACGATCTCCACGTaGACGACCTTTGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRSTIST*TTFALP
Trigger: GGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGA...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAATCGACCTCCTCCACTTaGAATGGGACGGAAAACTCC +
Preference number: 5 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKSTSST*NGTENS
Trigger: GGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCGA...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGCACCCTGGACCTTCTaGACATCCACGGAAACGCTC +
Preference number: 5 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSAPWTF*TSTETL
Trigger: GAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACATCACTGGCCTCATCTTaGCTCAGCTCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTSLASS*LSSSRS
Trigger: AGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGA...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACGAGTTTTATGTGCCTaGCAGCCTGGCTCACATCCT +
Preference number: 5 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKRVLCA*QPGSHP
Trigger: AGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 90 bp AGAGAAAGTTCTGACGTTGGTTTGACTGCTGACGGCTTTTCCGTATaGGTTTTCCTGCTGGGTAGTGGCCGAGGAAGAATATCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: RESSDVGLTADGFSV*VFLLGSGRGRISRA
Trigger: GGCTCGGGATATTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAACTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp ACACCCAACTCCACCTTGTCTGAAAGTGGAGCTGTGAACTGGATTTaGCCACTGAACCCTTCTTTAGGGCCTAACTGGAGTTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: TPNSTLSESGAVNWI*PLNPSLGPNWSCLT
Trigger: TGTCAGGCAACTCCAGTTAGGCCCTAAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCATACAAAAAGACTGGTaGTGTTCCGGCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSIQKDW*CSGPIQ
Trigger: TTGGATGGGGCCGGAACACAACCAGTCTTTTTGTAT...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CTGGGTATCTCGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACTTGTATCTCCGGCTTTaGGTCTGTCAGGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: LGISVLGCRRDIQFLPQNLYLRL*VCQGMF
Trigger: AAACATTCCCTGACAGACCAAAAGCCGGAGATACAA...GTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCGAGATACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTGCACCTGCTGCCACCTaGTCTCGGCGATCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSAPAAT*SRRSRY
Trigger: GTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGC...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp AGGGTGGTGCTAGCTCAGACTGTTATTCCCCAGTGCGCCACAGTCAGTGCGATGCCACTGACTCTTCTGTaGCAAAATAATCACCAACCT +
Preference number: 5 (lower is better)
Translates to: RVVLAQTVIPQCATVSAMPLTLL*QNNHQP
Trigger: AGGTTGGTGATTATTTTGCAACAGAAGAGTCAGTGG...CATCGCACTGACTGTGGCGCACTGGGGAATAACAGTCTGAGCTAGCACCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAACTCTCTTACCCACTTaGCCACACTGCCCGTTACGC +
Preference number: 5 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSTLLPT*PHCPLR
Trigger: GCGTAACGGGCAGTGTGGCAAAGTGGGTAAGAGAGT...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS TCA 90 bp GTTACTCACATCCATCTCCACCACTTCTGCAGTGGGTCCTTCATATaGCATTCGCTCAGTCCTCCAGACTTCAGAGGGGCCGAGTTTTAT +
Preference number: 5 (lower is better)
Translates to: VTHIHLHHFCSGSFI*HSLSPPDFRGAEFY
Trigger: ATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGAGCGAATGTCATATGAAGGACCCACTGCAGAAGTGGTGGAGATGGATGTGAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGTTCCGGCCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTCCCATGAATGGAGGGTaGGGAAAGGCATCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VFRPHPTTKLISLVCRVTPMNGG*GKASLR
Trigger: TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGG...AGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGGCCGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCAGGAGGCTGTCACCTaGACCAAATTCTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSQEAVT*TKFSPV
Trigger: GACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCTGTCATGGAATCGCCTaGCAGAGAACCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSCHGIA*QRTSGI
Trigger: GATGCCACTGGTTCTCTGCAAGGCGATTCCATGACA...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp TGGAGACTGAGTGAACTGCTTCAGGATACTGGTAACGATGTTTTCTaGTACGGTTTCTGTCATGGAATCGCCTTGCAGAGAACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: WRLSELLQDTGNDVF*YGFCHGIALQRTSG
Trigger: GCCACTGGTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAGCAGAAAACATCGTTACCAGTATCCTGAAGCAGTTCACTCAGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp GTGTCCTCTGCACTATCCTCCTGGGGAGATTCAGAAACGACACTTTaGAAGGTGCTCTTTTCAGTCATAACGGTTTGTCTACCCGAGGTA +
Preference number: 5 (lower is better)
Translates to: VSSALSSWGDSETTL*KVLFSVITVCLPEV
Trigger: TACCTCGGGTAGACAAACCGTTATGACTGAAAAGAGCACCTTCCAAAGTGTCGTTTCTGAATCTCCCCAGGAGGATAGTGCAGAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp CGGTGCTGGGCTGCAGGAGAGATATCCAGTTCCTTCCCCAAAACATCCTTCTATATTCATCTTTCACCCTaGAGCTCAGAAAGACCTGCA +
Preference number: 5 (lower is better)
Translates to: RCWAAGEISSSFPKTSFYIHLSP*SSERPA
Trigger: TGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT...ATAGAAGGATGTTTTGGGGAAGGAACTGGATATCTCTCCTGCAGCCCAGCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAACGACTCGCGGGCAATaGTGGAATCTTCACCTATGT +
Preference number: 5 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRTTRGQ*WNLHLC
Trigger: ACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGT...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TGTATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGTGTCATGGAATCGCCTaGCAGAGAACCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: CIHLSPLSSERPASHEWRCHGIA*QRTSGI
Trigger: GATGCCACTGGTTCTCTGCAAGGCGATTCCATGACA...CCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTGTCATGGAATCGCCTaGCAGAGAACCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVCHGIA*QRTSGI
Trigger: GATGCCACTGGTTCTCTGCAAGGCGATTCCATGACA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCACCTTTCAGGCCGAGGTaGATGATGTCTCCTATCATC +
Preference number: 5 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSPFRPR*MMSPII
Trigger: GATGATAGGAGACATCATCAACCTCGGCCTGAAAGG...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCCACGATCTCCACGTaGACGACCTTTGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSTIST*TTFALP
Trigger: GGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCACAGTTTGTGAGACGTaGACTTCAGCAACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSTVCET*TSATRV
Trigger: GACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGT...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCACCAGATTCCCCCAGTaGGGGAACCAGCCCATGGTA +
Preference number: 5 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLTRFPQ*GNQPMV
Trigger: TACCATGGGCTGGTTCCCCAACTGGGGGAATCTGGT...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp AGTCGTGTTCTCCTGAGGCTGCTTGGTCCTTCGATGCTGATTAACTaGGAATGTGACATCGCTTTCTCCATAACCTTCCTCCTCCTTAAC +
Preference number: 5 (lower is better)
Translates to: SRVLLRLLGPSMLIN*ECDIAFSITFLLLN
Trigger: GTTAAGGAGGAGGAAGGTTATGGAGAAAGCGATGTCACATTCTCAGTTAATCAGCATCGAAGGACCAAGCAGCCTCAGGAGAACACGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp GCAATGTGTTCAGAGGTTTCCGTTTCTGTAGGACCTAGTCGAATGTaGCTAAAGGATCTGCTAACACCCGATGTCATTTCTGCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: AMCSEVSVSVGPSRM*LKDLLTPDVISAPD
Trigger: ATCAGGGGCAGAAATGACATCGGGTGTTAGCAGATCCTTTAGGCACATTCGACTAGGTCCTACAGAAACGGAAACCTCTGAACACATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp GATAAGGTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: DKVQRSASLHSLIGTGHSEVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...GGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCACCTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTGCAGAGAAGCGCAAGTCTGCACAGTCTGATAGGAACTGGCCACTCCAGAAAACAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 5 (lower is better)
Translates to: VQRSASLHSLIGTGHSRKQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...TTTTCTGGAGTGGCCAGTTCCTATCAGACTGTGCAGACTTGCGCTTCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCAGGAGGCTGTCACCTaGACCAAATTCTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKQEAVT*TKFSPV
Trigger: GACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTAGTTCTGACGTTGGTTaGACTGCTGACGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVSSDVG*TADGFS
Trigger: GGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAACT...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACATTTTCTCTTCTGGCTTaGTTCGGATGGTTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTFSLLA*FGWFLV
Trigger: GACCAGAAACCATCCGAACAAAGCCAGAAGAGAAAA...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAATCACTGGCCTCATCTTaGCTCAGCTCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKSLASS*LSSSRS
Trigger: AGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGA...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAAGCTGTGAACTGGATTaGCCCACTGAACCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRSCELD*PTEPFF
Trigger: AAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGCT...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGGGACGAGCTGGTCCTaGAGCCTCCCAGACTCAGTT +
Preference number: 5 (lower is better)
Translates to: SHCREQEFSKISFLDDVIGTSWS*SLPDSV
Trigger: AACTGAGTCTGGGAGGCTCAAGGACCAGCTCGTCCC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS TCA 90 bp TTCCATGTGTACAGAATCTCCTATGACACCCAACTCCACCTTGTCTaGAAGTGGAGCTGTGAACTGGATTTGCCCACTGAACCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FHVYRISYDTQLHLV*KWSCELDLPTEPFF
Trigger: AAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTACACATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTCCCATGAATGGAGGGTaGGGAAAGGCATCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVPMNGG*GKASLR
Trigger: TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGG...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTGCACCCTGGACCTTCTaGACATCCACGGAAACGCTC +
Preference number: 5 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASAPWTF*TSTETL
Trigger: GAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGC...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGACAGTTTGTGAGACGTaGACTTCAGCAACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKTVCET*TSATRV
Trigger: GACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 90 bp TTCTCTTCTGGCTTTGTTCGGATGGTTTCTGGTCTGTTTCTTTCTTaGTCCCTCGTGGCTTTCACTTCTGTTTTCTTTCCCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: FSSGFVRMVSGLFLS*SLVAFTSVFFPRMT
Trigger: CGTCATTCTGGGAAAGAAAACAGAAGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACCAGAAACCATCCGAACAAAGCCAGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTATTCATCTTTCACCCTaGAGCTCAGAAAGACCTGCA +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVIHLSP*SSERPA
Trigger: TGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATGAAGCATGCTCATCCCAGTATCTTAAACTCGGTGGTGCCTATCTACAGGTCCCAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 5 (lower is better)
Translates to: MKHAHPSILNSVVPIYRSQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...GGACCTGTAGATAGGCACCACCGAGTTTAAGATACTGGGATGAGCATGCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGACAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 5 (lower is better)
Translates to: AQKDLHPMNGGLGKASLRQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CACATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTCAGGAGGCTGTCACCTaGACCAAATTCTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: HILVTFPIVGNRSLAKSAQEAVT*TKFSPV
Trigger: GACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTG...AGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGATACAAAAAGACTGGTaGTGTTCCGGCCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKIQKDW*CSGPIQ
Trigger: TTGGATGGGGCCGGAACACAACCAGTCTTTTTGTAT...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTTTGTATCTCCGGCTTTaGGTCTGTCAGGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVLYLRL*VCQGMF
Trigger: AAACATTCCCTGACAGACCAAAAGCCGGAGATACAA...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCATCTGCTCGGCTGACTaGCCTTTCAGCCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: VIILITCSHQLPFTSHEPICSAD*PFSPTS
Trigger: GGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGAT...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGTTCACCGCTTCTAGCTaGTTCTTTCCAGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKFTASS*FFPVSG
Trigger: TCCACTCACTGGAAAGAACAAGCTAGAAGCGGTGAA...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTTCACTGGCCTCATCTTaGCTCAGCTCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SHCREQEFSKISFLDDVISLASS*LSSSRS
Trigger: AGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGA...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CAAACAGATGCAAGCCATGTCTGTGACCAGGTGCAAAACATAGAAATTCATCTCGTAAACGAAGTTTCTTaGGGCCCTGGTGCAATGTGC +
Preference number: 5 (lower is better)
Translates to: QTDASHVCDQVQNIEIHLVNEVS*GPGAMC
Trigger: GCACATTGCACCAGGGCCCAAAGAAACTTCGTTTAC...GAGATGAATTTCTATGTTTTGCACCTGGTCACAGACATGGCTTGCATCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 90 bp TTTGTGTCTGGAAAAGAATCAGCAGATGCTTCTGTCTCTGGAGACTaGGTGAACTGCTTCAGGATACTGGTAACGATGTTTTCTGCTACG +
Preference number: 5 (lower is better)
Translates to: FVSGKESADASVSGD*VNCFRILVTMFSAT
Trigger: CGTAGCAGAAAACATCGTTACCAGTATCCTGAAGCAGTTCACTCAGTCTCCAGAGACAGAAGCATCTGCTGATTCTTTTCCAGACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 90 bp TCTCTCCTCGGAAGCCTTCTCTTTAGAATCGAACATTTTCTCTTCTaGCTTTGTTCGGATGGTTTCTGGTCTGTTTCTTTCTTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SLLGSLLFRIEHFLF*LCSDGFWSVSFLLP
Trigger: AGGGAGCAAGAAAGAAACAGACCAGAAACCATCCGAACAAAGCCAGAAGAGAAAATGTTCGATTCTAAAGAGAAGGCTTCCGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATCAAACTGAGCCCACTTAGACTCCTCACCACCAGTCTGTCCTGTCATCAGACAGGTTCATGGTTGTTATaGTATTCATCTTTCACCCTT +
Preference number: 5 (lower is better)
Translates to: IKLSPLRLLTTSLSCHQTGSWLL*YSSFTL
Trigger: AAGGGTGAAAGATGAATACAATAACAACCATGAACC...TGTCTGATGACAGGACAGACTGGTGGTGAGGAGTCTAAGTGGGCTCAGTTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGGGAAAGGCATCTTTAAGAGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: AQKDLHPMNGGLGKASLREVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGGATGCAGGTCTTTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTCCTTTCAGGCCGAGGTaGATGATGTCTCCTATCATC +
Preference number: 5 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSPFRPR*MMSPII
Trigger: GATGATAGGAGACATCATCAACCTCGGCCTGAAAGG...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGAACAGTTTGTGAGACGTaGACTTCAGCAACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGTVCET*TSATRV
Trigger: GACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGT...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCGTGTTGCACAAGACTaGGCACACCGCACTCAGCAA +
Preference number: 5 (lower is better)
Translates to: VIILITCSHQLPFTSHEPRVAQD*AHRTQQ
Trigger: TTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS-3UTR CAA 90 bp TCCTGTCATCAGACAGGAGGCTGTCACCTTGACCAAATTCTCACCAGTCAATCAGGTTCATGGTTGTTATaGTATTCATCTTTCACCCTT +
Preference number: 5 (lower is better)
Translates to: SCHQTGGCHLDQILTSQSGSWLL*YSSFTL
Trigger: AAGGGTGAAAGATGAATACAATAACAACCATGAACC...TGATTGACTGGTGAGAATTTGGTCAAGGTGACAGCCTCCTGTCTGATGACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCATCTTTCACCCTTGAGCTCAGAAAGACCTGCATCCCATGAATGGAGGGTTGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: IHLSPLSSERPASHEWRVEVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...AACCCTCCATTCATGGGATGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTAACAATAAATACAAAAAGACTGGTTGTGTTCCGGCCCCATCCAACCACGAAGCAATCACTAGTTCATTaGGCAGATGGACAACAAAGG +
Preference number: 5 (lower is better)
Translates to: VTINTKRLVVFRPHPTTKQSLVH*ADGQQR
Trigger: CCTTTGTTGTCCATCTGCCAAATGAACTAGTGATTG...CTTCGTGGTTGGATGGGGCCGGAACACAACCAGTCTTTTTGTATTTATTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTAGTTCTGACGTTGGTTaGACTGCTGACGGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SHCREQEFSKISFLDDVISSDVG*TADGFS
Trigger: GGAAAAGCCGTCAGCAGTCAAACCAACGTCAGAACT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCTCGACCTCCTCCACTTaGAATGGGACGGAAAACTCC +
Preference number: 5 (lower is better)
Translates to: VIILITCSHQLPFTSHEPSTSST*NGTENS
Trigger: GGAGTTTTCCGTCCCATTCAAAGTGGAGGAGGTCGA...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTTCACCGCTTCTAGCTaGTTCTTTCCAGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSFTASS*FFPVSG
Trigger: TCCACTCACTGGAAAGAACAAGCTAGAAGCGGTGAA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCGAGTTTTATGTGCCTaGCAGCCTGGCTCACATCCT +
Preference number: 5 (lower is better)
Translates to: VIILITCSHQLPFTSHEPRVLCA*QPGSHP
Trigger: AGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGATTGTATCTCCGGCTTTaGGTCTGTCAGGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGLYLRL*VCQGMF
Trigger: AAACATTCCCTGACAGACCAAAAGCCGGAGATACAA...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATAAACTGTTTCCCTGGACAAAACACCCCAACTGCAATGACTTCTGTTCAAAGTTTTTCTCTTCTGGCTTaGTTCGGATGGTTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: INCFPGQNTPTAMTSVQSFSLLA*FGWFLV
Trigger: GACCAGAAACCATCCGAACAAAGCCAGAAGAGAAAA...ACTTTGAACAGAAGTCATTGCAGTTGGGGTGTTTTGTCCAGGGAAACAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCATGAGCCCCCCATGAATGGAGGGTaGGGAAAGGCATCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VIILITCSHQLPFTSHEPPMNGG*GKASLR
Trigger: TCTTAAAGATGCCTTTCCCAACCCTCCATTCATGGG...GGGCTCATGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTATTCATCTTTCACCCTaGAGCTCAGAAAGACCTGCA +
Preference number: 5 (lower is better)
Translates to: SHCREQEFSKISFLDDVIIHLSP*SSERPA
Trigger: TGCAGGTCTTTCTGAGCTCAAGGGTGAAAGATGAAT...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp GAAGTGGGTCATAATATTAATTACCTGTTCACATCAGCTTCCATTTACAAGTCAACGACTCGCGGGCAATaGTGGAATCTTCACCTATGT +
Preference number: 5 (lower is better)
Translates to: EVGHNINYLFTSASIYKSTTRGQ*WNLHLC
Trigger: ACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGT...TGACTTGTAAATGGAAGCTGATGTGAACAGGTAATTAATATTATGACCCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp ATTCTTGTGACATTTCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTTTTCTCTTCTGGCTTaGTTCGGATGGTTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ILVTFPIVGNRSLAKSASFSLLA*FGWFLV
Trigger: GACCAGAAACCATCCGAACAAAGCCAGAAGAGAAAA...AGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGAAATGTCACAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp CATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGACTTTTCAGCATGAAATaGTCTGCAGCCAAATGTGCT +
Preference number: 5 (lower is better)
Translates to: HPTTKLISLVCRVTDFKGLFSMK*SAAKCA
Trigger: AGCACATTTGGCTGCAGACAATTTCATGCTGAAAAG...TCCTTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp TATCTTGAAAGCTGTGCTGCATTTCTCCTCCACTTATCAATGAAGAAAACGTGCTTCAGAAACGACACTTaGGAAGGTGCTCTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: YLESCAAFLLHLSMKKTCFRNDT*EGALFS
Trigger: ACTGAAAAGAGCACCTTCCAAAGTGTCGTTTCTGAA...GCACGTTTTCTTCATTGATAAGTGGAGGAGAAATGCAGCACAGCTTTCAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS-3UTR CAA 90 bp CCCCATCCAACCACGAAGTTGATTTCTCTTGTGTGCAGAGTGACTGATTTTAAAGGTTCATGGTTGTTATaGTATTCATCTTTCACCCTT +
Preference number: 5 (lower is better)
Translates to: PHPTTKLISLVCRVTDFKGSWLL*YSSFTL
Trigger: AAGGGTGAAAGATGAATACAATAACAACCATGAACC...TTTAAAATCAGTCACTCTGCACACAAGAGAAATCAACTTCGTGGTTGGATGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS-3UTR CAA 90 bp TCCCATTGTAGGGAACAGGAGTTTAGCAAAATCAGCTTCTTAGATGATGTCATTGAGGTGGGTTCATGGTaGTTATTGTATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: SHCREQEFSKISFLDDVIEVGSW*LLYSSF
Trigger: GAAAGATGAATACAATAACAACCATGAACCCACCTC...AATGACATCATCTAAGAAGCTGATTTTGCTAAACTCCTGTTCCCTACAATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp GCCAGCGCAGTGGCCCAGCTCAGCTCGTCCAGCTGCTaGCGCAAGCTGCGCGCCTCCTCGGCGCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: ASAVAQLSSSSC*RKLRASSAQRA
Trigger: GGCCCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAGCTGGGCCACTGCGCTGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp TCTCGGGGCCCGTCTGCAGCCGCCAGGACAGCATCTTaGCGGGCGTGCGGGGTTCTCGCGGCTGGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SRGPSAAARTAS*RACGVLAAGRL
Trigger: GAGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp TCCGCCAGCGCAGTGGCCCAGCTCAGCTCGTCCAGCTaGTGCCGCAAGCTGCGCGCCTCCTCGGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SASAVAQLSSSS*CRKLRASSAQR
Trigger: CCGCTGCGCCGAGGAGGCGCGCAGCTTGCGGCAGCAGCTGGACGAGCTGAGCTGGGCCACTGCGCTGGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp CTGCTCCAACCCGAGCGCCTCGCGCCGCAGCGCCTCTaGCTCCTGCGCGCACAGCCGCGTCTCTTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: LLQPERLAPQRL*LLRAQPRLFLR
Trigger: GCGGAGGAAGAGACGCGGCTGTGCGCGCAGGAGGCAGAGGCGCTGCGGCGCGAGGCGCTCGGGTTGGAGCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 72 bp GCGGGGTTCTCGCGGCTGGCCGGCTCCCTCCTGCCCTaGTCTTGTCCCGGTCTCGTCCTCTCCGCCGCGACG +
Preference number: 6 (lower is better)
Translates to: AGFSRLAGSLLP*SCPGLVLSAAT
Trigger: CGTCGCGGCGGAGAGGACGAGACCGGGACAAGACCAGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp GCGCGCACAGCCGCGTCTCTTCCTCCGCCTGGAGTCTaGTCTCCTGGCCGCGCCGCAGCGCCTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ARTAASLPPPGV*SPGRAAAPPPA
Trigger: AGCTGGAGGAGGCGCTGCGGCGCGGCCAGGAGAGCAGACTCCAGGCGGAGGAAGAGACGCGGCTGTGCGCGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CAA 72 bp TTCTCGGGGCCCGTCTGCAGCCGCCAGGACAGCATCTaGCCGGGCGTGCGGGGTTCTCGCGGCTGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: FSGPVCSRQDSI*PGVRGSRGWPA
Trigger: AGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp CTGCACCGTCTCCCGCCACGACTCGGCCACCAGCAGTaGGTAGCTGTCGTGCACCTCCCGCAGGCGTGGCGG +
Preference number: 6 (lower is better)
Translates to: LHRLPPRLGHQQ*VAVVHLPQAWR
Trigger: CCGCCACGCCTGCGGGAGGTGCACGACAGCTACGCACTGCTGGTGGCCGAGTCGTGGCGGGAGACGGTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 72 bp GACAGCATCTTGCCGGGCGTGCGGGGTTCTCGCGGCTaGCCGGCTCCCTCCTGCCCTGGTCTTGTCCCGGTC +
Preference number: 6 (lower is better)
Translates to: DSILPGVRGSRG*PAPSCPGLVPV
Trigger: GACCGGGACAAGACCAGGGCAGGAGGGAGCCGGCCAGCCGCGAGAACCCCGCACGCCCGGCAAGATGCTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp TTGAGCTCCTGGAGCTCGGCCTTCTCGGGGCCCGTCTaGAGCCGCCAGGACAGCATCTTGCCGGGCGTGCGG +
Preference number: 6 (lower is better)
Translates to: LSSWSSAFSGPV*SRQDSILPGVR
Trigger: CCGCACGCCCGGCAAGATGCTGTCCTGGCGGCTGCAGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp GCCTCCTCCAGCTCGCGCACCTCGTCCTCGTACAGCTaGACCGTCTCCCGCCACGACTCGGCCACCAGCAGT +
Preference number: 6 (lower is better)
Translates to: ASSSSRTSSSYS*TVSRHDSATSS
Trigger: ACTGCTGGTGGCCGAGTCGTGGCGGGAGACGGTGCAGCTGTACGAGGACGAGGTGCGCGAGCTGGAGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS CCA 72 bp GCCTGTGGGGCTGCTGACCTCCACAGTGGCCGACACTaGGCCCTGGGGAGTGCGCTGTCCCGAGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: ACGAADLHSGRH*ALGSALSRAVR
Trigger: TCTCACAGCTCGGGACAGCGCACTCCCCAGGGCCCAGTGTCGGCCACTGTGGAGGTCAGCAGCCCCACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp CCCGCACCCGACACACGTAGTCATAGAGCCGGGCGTTaGGCTCCTGGAGCTCGGCCTTCTCGGGGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: PAPDTRSHRAGR*APGARPSRGPS
Trigger: AGACGGGCCCCGAGAAGGCCGAGCTCCAGGAGCTCAACGCCCGGCTCTATGACTACGTGTGTCGGGTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000594047.2
CDS GCA 72 bp TCCTCCCTCATGCGCTCGGGAAGGGTTTCCTCCAGCTaGCCGATGACCTCCACCAGCTGCTGCCGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSLMRSGRVSSS*PMTSTSCCRGS
Trigger: GGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGAGGAAACCCTTCCCGAGCGCATGAGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CCTCATCTGGGCTGCCAGGCGCTGGGCTGCGTTGCCTaGTCAGGCTCTCCCGAACCACCGACTCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: PHLGCQALGCVA*SGSPEPPTPQP
Trigger: AGGCTGTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp CTCCGCTCCACCTTCCTCATCTGGGCTGCCAGGCGCTGGGCTGCGTaGCCTGCTCAGGCTCTCCCGAACCACCGACTCCACAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LRSTFLIWAARRWAA*PAQALPNHRLHSLL
Trigger: GAGAAGGCTGTGGAGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp GGGTCACGGAACTGCCACCAGCACCCTGGACCTTCTTaGCATCCACGGAAACGCTCCCCGGCCCACCCTGCC +
Preference number: 6 (lower is better)
Translates to: GSRNCHQHPGPS*HPRKRSPAHPA
Trigger: GGCAGGGTGGGCCGGGGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp GCTGTGAGAGGCCCCACCAGCAACCTCGCTCTCGCCTaGAGGGATGTACAGCTCCCGGGTGGCCCAACGCCT +
Preference number: 6 (lower is better)
Translates to: AVRGPTSNLALA*RDVQLPGGPTP
Trigger: AGGCGTTGGGCCACCCGGGAGCTGTACATCCCTTCAGGCGAGAGCGAGGTTGCTGGTGGGGCCTCTCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CTCCACCTTCCTCATCTGGGCTGCCAGGCGCTGGGCTaGGTTGCCTGCTCAGGCTCTCCCGAACCACCGACT +
Preference number: 6 (lower is better)
Translates to: LHLPHLGCQALG*VACSGSPEPPT
Trigger: AGTCGGTGGTTCGGGAGAGCCTGAGCAGGCAACGCAGCCCAGCGCCTGGCAGCCCAGATGAGGAAGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp CTCACAGACCGGCTGGCTCCGGTCGGGCTCGCTGCCTaGCTTAGGTCACCTCCCGCACTTACCTCCACCACT +
Preference number: 6 (lower is better)
Translates to: LTDRLAPVGLAA*LRSPPALTSTT
Trigger: AGTGGTGGAGGTAAGTGCGGGAGGTGACCTAAGTCAGGCAGCGAGCCCGACCGGAGCCAGCCGGTCTGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 72 bp AGGGTCACGGAACTGCCACCAGCACCCTGGACCTTCTaGACATCCACGGAAACGCTCCCCGGCCCACCCTGC +
Preference number: 6 (lower is better)
Translates to: RVTELPPAPWTF*TSTETLPGPPC
Trigger: GCAGGGTGGGCCGGGGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp TCAGCAACCAGGGTCACGGAACTGCCACCAGCACCCTGGACCTTCTaGACATCCACGGAAACGCTCCCCGGCCCACCCTGCCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SATRVTELPPAPWTF*TSTETLPGPPCPSL
Trigger: CAGAGAGGGGCAGGGTGGGCCGGGGAGCGTTTCCGTGGATGTCAAGAAGGTCCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 72 bp GTCCATATCTGCAGAAGACTCTGCTGGGCCAGGTTCTaGCGAGCCCCATGCCTCTGGACAGGCAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: VHICRRLCWARF*RAPCLWTGRGR
Trigger: CCTGCCCCTGCCTGTCCAGAGGCATGGGGCTCGCCAGAACCTGGCCCAGCAGAGTCTTCTGCAGATATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp TCCTCCAGCTGCCCGATGACCTCCACCAGCTGCTGCCGGGGCTCCTaGGAGGAGATGCCCTTCATGGAGGTGTGGAATTCGTGGGGTATT +
Preference number: 6 (lower is better)
Translates to: SSSCPMTSTSCCRGS*EEMPFMEVWNSWGI
Trigger: AATACCCCACGAATTCCACACCTCCATGAAGGGCATCTCCTCCAAGGAGCCCCGGCAGCAGCTGGTGGAGGTCATCGGGCAGCTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CACGGGCTCCTCCACGATCTCCACGTTGACGACCTTTaGTCTCCCCTCCCTCCCTTTCAGGCCGAGGTTGAT +
Preference number: 6 (lower is better)
Translates to: HGLLHDLHVDDL*SPLPPFQAEVD
Trigger: ATCAACCTCGGCCTGAAAGGGAGGGAGGGGAGAGCAAAGGTCGTCAACGTGGAGATCGTGGAGGAGCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp GGGCCTAGGAAGATGACTTCTCTGGACAGTGGACTTTaGCCGGGACCCAGCGTGACATGCCTCACAGACCGG +
Preference number: 6 (lower is better)
Translates to: GPRKMTSLDSGL*PGPSVTCLTDR
Trigger: CCGGTCTGTGAGGCATGTCACGCTGGGTCCCGGTCAAAGTCCACTGTCCAGAGAAGTCATCTTCCTAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp CAGACACACCGAGAGCTCCCGCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTACTCACATCCATCTGAC +
Preference number: 6 (lower is better)
Translates to: QTHRELPLPVSG*GSPLRYSHPSD
Trigger: GTCAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS GCA 72 bp TGGATCTGCCCGTACACCGAGCCGTCATCTCTGTCGTaGCCCCCGGGGTGTTCATCTGGAGTGGACACAAAA +
Preference number: 6 (lower is better)
Translates to: WICPYTEPSSLS*PPGCSSGVDTK
Trigger: TTTTGTGTCCACTCCAGATGAACACCCCGGGGGGCACGACAGAGATGACGGCTCGGTGTACGGGCAGATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp GAGTACCTGATGGTGGATTCCTCCTCGATGTGGATCTaGCCGTACACCGAGCCGTCATCTCTGTCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: EYLMVDSSSMWI*PYTEPSSLSCP
Trigger: GGGGCACGACAGAGATGACGGCTCGGTGTACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CCTGGTGCACATCTGCTGAGCCCTCTCCGTGCACAGTaGTCTCTGAGTCACCAGATTCCCCCAGTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: PGAHLLSPLRAQ*SLSHQIPPVGE
Trigger: TTCCCCAACTGGGGGAATCTGGTGACTCAGAGAGCACTGTGCACGGAGAGGGCTCAGCAGATGTGCACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp CAGACACACCGAGAGCTCCCGCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTACTCACATCCATCTCCA +
Preference number: 6 (lower is better)
Translates to: QTHRELPLPVSG*GSPLRYSHPSP
Trigger: TGGAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp TTTGACCGTGTGCTTTCCGAAGCACCTGCTGCCACCTaGTCTCGGCGATCCCGGTACGACTCGCGGGCAATT +
Preference number: 6 (lower is better)
Translates to: FDRVLSEAPAAT*SRRSRYDSRAI
Trigger: AATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGCACACGGTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp GTCCTCTCATTTGACCGTGTGCTTTCCGAAGCACCTGCTGCCACCTaGTCTCGGCGATCCCGGTACGACTCGCGGGCAATTGTGGAATCT +
Preference number: 6 (lower is better)
Translates to: VLSFDRVLSEAPAAT*SRRSRYDSRAIVES
Trigger: AGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAGCAGGTGCTTCGGAAAGCACACGGTCAAATGAGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp AGCTCCTCCAGGTCTAACCGATCGGCATCCACAGTTTGTGAGACGTaGACTTCAGCAACCAGGGTCACGGAACTGCCACCAGCACCCTGG +
Preference number: 6 (lower is better)
Translates to: SSSRSNRSASTVCET*TSATRVTELPPAPW
Trigger: CCAGGGTGCTGGTGGCAGTTCCGTGACCCTGGTTGCTGAAGTCAACGTCTCACAAACTGTGGATGCCGATCGGTTAGACCTGGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp CCTGATAGTCCCGCAGCCAGTCAGCCATGGCCAAGGTaGGGGTTGCCTTCTCATCCTCCAGGCAGTCAATCA +
Preference number: 6 (lower is better)
Translates to: PDSPAASQPWPR*GLPSHPPGSQS
Trigger: TGATTGACTGCCTGGAGGATGAGAAGGCAACCCTCACCTTGGCCATGGCTGACTGGCTGCGGGACTATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328642.11
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CAGACACACCGAGAGCTCCCGCTTCCTGTGTCCGGCTaGGGATCGCCTCTACGTTACTCACATCCATCTGAA +
Preference number: 6 (lower is better)
Translates to: QTHRELPLPVSG*GSPLRYSHPSE
Trigger: TTCAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCGGACACAGGAAGCGGGAGCTCTCGGTGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 72 bp CTCAGCAAGTGCTGGTCATCTTCATGGGAGAGGTCCTaGAGCCCAGAATCACATGGAGCCCACCGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: LSKCWSSSWERS*SPESHGAHRSE
Trigger: CTCTGACCGGTGGGCTCCATGTGATTCTGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CCA 72 bp TGGCACACCGCACTCAGCAAGTGCTGGTCATCTTCATaGGAGAGGTCCTGGAGCCCAGAATCACATGGAGCC +
Preference number: 6 (lower is better)
Translates to: WHTALSKCWSSS*ERSWSPESHGA
Trigger: GGCTCCATGTGATTCTGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CAA 72 bp CCTTGTCTCGGCGATCCCGGTACGACTCGCGGGCAATaGTGGAATCTTCACCTATGTAAACGGGGACCTCCC +
Preference number: 6 (lower is better)
Translates to: PCLGDPGTTRGQ*WNLHLCKRGPP
Trigger: GGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp CTGCTGCCACCTTGTCTCGGCGATCCCGGTACGACTCGCGGGCAATaGTGGAATCTTCACCTATGTAAACGGGGACCTCCCTTGTATCTC +
Preference number: 6 (lower is better)
Translates to: LLPPCLGDPGTTRGQ*WNLHLCKRGPPLYL
Trigger: GAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACAAGGTGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp CTTGCAGAGAACCAGTGGCATCACTGGTGCCCAACCTaGACCGTAGCTCTCTTGCTTCTGCCTCTCTACCGG +
Preference number: 6 (lower is better)
Translates to: LAENQWHHWCPT*TVALLLLPLYR
Trigger: CCGGTAGAGAGGCAGAAGCAAGAGAGCTACGGTTCAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp TCAGAGGTCTGTCTCCAGAAGGCCAGGGAGAGAGGCTaGAGAGTCAGGGCACAGATGCAGATGATGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SEVCLQKARERG*RVRAQMQMMAA
Trigger: AGCTGCCATCATCTGCATCTGTGCCCTGACTCTTCAGCCTCTCTCCCTGGCCTTCTGGAGACAGACCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS GCA 72 bp TCAGTCCTCCAGACTTCAGAGGGGCCGAGTTTTATGTaGCTTGCAGCCTGGCTCACATCCTCCAGCACCTGT +
Preference number: 6 (lower is better)
Translates to: SVLQTSEGPSFM*LAAWLTSSSTC
Trigger: ACAGGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGTCTGGAGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp GTGTTGCACAAGACTTGGCACACCGCACTCAGCAAGTaGTGGTCATCTTCATGGGAGAGGTCCTGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: VLHKTWHTALSK*WSSSWERSWSP
Trigger: TGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CCA 72 bp TGTCTCGGCGATCCCGGTACGACTCGCGGGCAATTGTaGAATCTTCACCTATGTAAACGGGGACCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: CLGDPGTTRGQL*NLHLCKRGPPL
Trigger: CAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAATTGCCCGCGAGTCGTACCGGGATCGCCGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 72 bp TGCCAAGAGTACCTGATGGTGGATTCCTCCTCGATGTaGATCTGCCCGTACACCGAGCCGTCATCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: CQEYLMVDSSSM*ICPYTEPSSLS
Trigger: CGACAGAGATGACGGCTCGGTGTACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 72 bp ACTTCAGAGGGGCCGAGTTTTATGTGCCTTGCAGCCTaGCTCACATCCTCCAGCACCTGTGACTGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: TSEGPSFMCLAA*LTSSSTCDWAK
Trigger: CTTTGCCCAGTCACAGGTGCTGGAGGATGTGAGCCAGGCTGCAAGGCACATAAAACTCGGCCCCTCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CCA 72 bp CAGGGGAGTCCGCTGAACCAGCAAGCACAAATGTTCTaGACACGGGTCCACGGATGGCAATGTGTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: QGSPLNQQAQMF*TRVHGWQCVQR
Trigger: CCTCTGAACACATTGCCATCCGTGGACCCGTGTCCAGAACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp CGAACCACCGACTCCACAGCCTTCTCCATCTCACTGGCCTCATCTTaGCTCAGCTCCTCCAGGTCTAACCGATCGGCATCCACAGTTTGT +
Preference number: 6 (lower is better)
Translates to: RTTDSTAFSISLASS*LSSSRSNRSASTVC
Trigger: ACAAACTGTGGATGCCGATCGGTTAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGTGAGATGGAGAAGGCTGTGGAGTCGGTGGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp GGCCCTGGTGCAATGTGCCTTAGCGTTCTGCTGCTGTCTGCTAACTaGCCTAGCTCAGGGGAGTCCGCTGAACCAGCAAGCACAAATGTT +
Preference number: 6 (lower is better)
Translates to: GPGAMCLSVLLLSAN*PSSGESAEPASTNV
Trigger: AACATTTGTGCTTGCTGGTTCAGCGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACATTGCACCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp TTGCCACACTGCCCGTTACGCTGTGTGAGACGTGTTGCACAAGACTaGGCACACCGCACTCAGCAAGTGCTGGTCATCTTCATGGGAGAG +
Preference number: 6 (lower is better)
Translates to: LPHCPLRCVRRVAQD*AHRTQQVLVIFMGE
Trigger: CTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS TCA 72 bp GAGTCCCCTGCACGATTTCATCCTGCCAAGAGTACCTaGTGGTGGATTCCTCCTCGATGTGGATCTGCCCGT +
Preference number: 6 (lower is better)
Translates to: ESPARFHPAKST*WWIPPRCGSAR
Trigger: ACGGGCAGATCCACATCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp TCTTACCCACTTTGCCACACTGCCCGTTACGCTGTGTaGGACGTGTTGCACAAGACTTGGCACACCGCACTC +
Preference number: 6 (lower is better)
Translates to: SYPLCHTARYAV*DVLHKTWHTAL
Trigger: GAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAAAGTGGGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS GCA 72 bp ACTGCACCGTCCTTCTGTGTCCTCCTTCGAGTCCCCTaGACGATTTCATCCTGCCAAGAGTACCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: TAPSFCVLLRVP*TISSCQEYLMV
Trigger: CACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACAGAAGGACGGTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp CAATGTGCCTTAGCGTTCTGCTGCTGTCTGCTAACTTaGCTAGCTCAGGGGAGTCCGCTGAACCAGCAAGCA +
Preference number: 6 (lower is better)
Translates to: QCALAFCCCLLT*LAQGSPLNQQA
Trigger: TGCTTGCTGGTTCAGCGGACTCCCCTGAGCTAGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp TTTGCCACACTGCCCGTTACGCTGTGTGAGACGTGTTaGACAAGACTTGGCACACCGCACTCAGCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: FATLPVTLCETC*TRLGTPHSASA
Trigger: AGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CCA 72 bp TTGCACAAGACTTGGCACACCGCACTCAGCAAGTGCTaGTCATCTTCATGGGAGAGGTCCTGGAGCCCAGAA +
Preference number: 6 (lower is better)
Translates to: LHKTWHTALSKC*SSSWERSWSPE
Trigger: TTCTGGGCTCCAGGACCTCTCCCATGAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS CAA 72 bp ACCTTTGCTCTCCCCTCCCTCCCTTTCAGGCCGAGGTaGATGATGTCTCCTATCATCTGCTCGGCTGACTTG +
Preference number: 6 (lower is better)
Translates to: TFALPSLPFRPR*MMSPIICSADL
Trigger: CAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCTCGGCCTGAAAGGGAGGGAGGGGAGAGCAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp TGCCCGTTACGCTGTGTGAGACGTGTTGCACAAGACTaGGCACACCGCACTCAGCAAGTGCTGGTCATCTTC +
Preference number: 6 (lower is better)
Translates to: CPLRCVRRVAQD*AHRTQQVLVIF
Trigger: GAAGATGACCAGCACTTGCTGAGTGCGGTGTGCCAAGTCTTGTGCAACACGTCTCACACAGCGTAACGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS GCA 72 bp TGTGTCCTCCTTCGAGTCCCCTGCACGATTTCATCCTaGCAAGAGTACCTGATGGTGGATTCCTCCTCGATG +
Preference number: 6 (lower is better)
Translates to: CVLLRVPCTISS*QEYLMVDSSSM
Trigger: CATCGAGGAGGAATCCACCATCAGGTACTCTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp GACTGTGGGTTCGGCATGAAATTCACCGCTTCTAGCTaGTTCTTTCCAGTGAGTGGAACCCAGGTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: DCGFGMKFTASS*FFPVSGTQVPL
Trigger: GAGGGGGACCTGGGTTCCACTCACTGGAAAGAACAAGCTAGAAGCGGTGAATTTCATGCCGAACCCACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp CCTCTTCTGGCATCACCTCCAATAGATGTGCCCGTCTaGGATCCACGGTGCCCTGACAGGTTAGAATACAGT +
Preference number: 6 (lower is better)
Translates to: PLLASPPIDVPV*DPRCPDRLEYS
Trigger: ACTGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGAGGTGATGCCAGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp ATGAAATTGTCTGCAGCCAAATGTGCTGTGCCTCCCTaGTCCGTCCATATCTGCAGAAGACTCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: MKLSAAKCAVPP*SVHICRRLCWA
Trigger: GGCCCAGCAGAGTCTTCTGCAGATATGGACGGATCAGGGAGGCACAGCACATTTGGCTGCAGACAATTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 72 bp CGGCTGCGGATCGCCTCTACGTTACTCACATCCATCTaGAAGGTAAACGAAGTTTCTTTGGGCCCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: RLRIASTLLTSI*KVNEVSLGPGA
Trigger: TGCACCAGGGCCCAAAGAAACTTCGTTTACCTTTCAGATGGATGTGAGTAACGTAGAGGCGATCCGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp CCTTTCAGGCCGAGGTTGATGATGTCTCCTATCATCTaGTCGGCTGACTTGCCTTTCAGCCCCACTTCCTTA +
Preference number: 6 (lower is better)
Translates to: PFRPRLMMSPII*SADLPFSPTSL
Trigger: TAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCTCGGCCTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp AGGCAGTCAATCACTCTCTTACCCACTTTGCCACACTaGCCGTTACGCTGTGTGAGACGTGTTGCACAAGAC +
Preference number: 6 (lower is better)
Translates to: RQSITLLPTLPH*PLRCVRRVAQD
Trigger: GTCTTGTGCAACACGTCTCACACAGCGTAACGGGCAGTGTGGCAAAGTGGGTAAGAGAGTGATTGACTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560674.5
CDS TCA 72 bp TCCAATAGATGTGCCCGTCTGAGATCCACGGTGCCCTaGCAGGTTAGAATACAGTGCCGAGCTGTGATTGAA +
Preference number: 6 (lower is better)
Translates to: SNRCARLRSTVP*QVRIQCRAVIE
Trigger: TTCAATCACAGCTCGGCACTGTATTCTAACCTGTCAGGGCACCGTGGATCTCAGACGGGCACATCTATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp TCCCTGGCAACCCTTCCATGTGTACAGAATCTCCTATaGCACCCAACTCCACCTTGTCTGAAAGTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SLATLPCVQNLL*HPTPPCLKVEL
Trigger: CAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTACACATGGAAGGGTTGCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp ATGTTTTCTGCTACGGTTTCTGTCATGGAATCGCCTTaGAGAGAACCAGTGGCATCACTGGTGCCCAACCTG +
Preference number: 6 (lower is better)
Translates to: MFSATVSVMESP*REPVASLVPNL
Trigger: CAGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAGCAGAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp GATGTTTTCTGCTACGGTTTCTGTCATGGAATCGCCTaGCAGAGAACCAGTGGCATCACTGGTGCCCAACCT +
Preference number: 6 (lower is better)
Translates to: DVFCYGFCHGIA*QRTSGITGAQP
Trigger: AGGTTGGGCACCAGTGATGCCACTGGTTCTCTGCAAGGCGATTCCATGACAGAAACCGTAGCAGAAAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp TCTGACGTTGGTTTGACTGCTGACGGCTTTTCCGTATaGGTTTTCCTGCTGGGTAGTGGCCGAGGAAGAATA +
Preference number: 6 (lower is better)
Translates to: SDVGLTADGFSV*VFLLGSGRGRI
Trigger: TATTCTTCCTCGGCCACTACCCAGCAGGAAAACTCATACGGAAAAGCCGTCAGCAGTCAAACCAACGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp GCCGAGGTTGATGATGTCTCCTATCATCTGCTCGGCTaGCTTGCCTTTCAGCCCCACTTCCTTAATATCCTT +
Preference number: 6 (lower is better)
Translates to: AEVDDVSYHLLG*LAFQPHFLNIL
Trigger: AAGGATATTAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp ATCTGGAGTGGACACAAAATAACTCTGCTCGCCCTCTaGATCACCTGCCTCTGTCACTTCTTCCACGTGAGT +
Preference number: 6 (lower is better)
Translates to: IWSGHKITLLAL*ITCLCHFFHVS
Trigger: ACTCACGTGGAAGAAGTGACAGAGGCAGGTGATTCAGAGGGCGAGCAGAGTTATTTTGTGTCCACTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp TCCACCTTGTCTGAAAGTGGAGCTGTGAACTGGATTTaGCCACTGAACCCTTCTTTAGGGCCTAACTGGAGT +
Preference number: 6 (lower is better)
Translates to: STLSESGAVNWI*PLNPSLGPNWS
Trigger: ACTCCAGTTAGGCCCTAAAGAAGGGTTCAGTGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp AAGGTAAACGAAGTTTCTTTGGGCCCTGGTGCAATGTaGCTTAGCGTTCTGCTGCTGTCTGCTAACTTGCCT +
Preference number: 6 (lower is better)
Translates to: KVNEVSLGPGAM*LSVLLLSANLP
Trigger: AGGCAAGTTAGCAGACAGCAGCAGAACGCTAAGGCACATTGCACCAGGGCCCAAAGAAACTTCGTTTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CCA 72 bp CTACGTTACTCACATCCATCTCCACCACTTCTGCAGTaGGTCCTTCATATGACATTCGCTCAGTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LRYSHPSPPLLQ*VLHMTFAQSSR
Trigger: TCTGGAGGACTGAGCGAATGTCATATGAAGGACCCACTGCAGAAGTGGTGGAGATGGATGTGAGTAACGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp CTATGTAAACGGGGACCTCCCTTGTATCTCCGGCTTTaGGTCTGTCAGGGAATGTTTTCACTTGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LCKRGPPLYLRL*VCQGMFSLEPQ
Trigger: CTGAGGCTCAAGTGAAAACATTCCCTGACAGACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTTACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp GACACTTTGGAAGGTGCTCTTTTCAGTCATAACGGTTaGTCTACCCGAGGTATGACTGTGAGTGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: DTLEGALFSHNG*STRGMTVSGLV
Trigger: CACCAGGCCACTCACAGTCATACCTCGGGTAGACAAACCGTTATGACTGAAAAGAGCACCTTCCAAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp AACCCTTCCATGTGTACAGAATCTCCTATGACACCCAACTCCACCTaGTCTGAAAGTGGAGCTGTGAACTGGATTTGCCCACTGAACCCT +
Preference number: 6 (lower is better)
Translates to: NPSMCTESPMTPNST*SESGAVNWICPLNP
Trigger: AGGGTTCAGTGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTACACATGGAAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp TTCAGAAACGACACTTTGGAAGGTGCTCTTTTCAGTCATAACGGTTaGTCTACCCGAGGTATGACTGTGAGTGGCCTGGTGCACATCTGC +
Preference number: 6 (lower is better)
Translates to: FRNDTLEGALFSHNG*STRGMTVSGLVHIC
Trigger: GCAGATGTGCACCAGGCCACTCACAGTCATACCTCGGGTAGACAAACCGTTATGACTGAAAAGAGCACCTTCCAAAGTGTCGTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp TGTGTCCTCTGCACTATCCTCCTGGGGAGATTCAGAAACGACACTTaGGAAGGTGCTCTTTTCAGTCATAACGGTTTGTCTACCCGAGGT +
Preference number: 6 (lower is better)
Translates to: CVLCTILLGRFRNDT*EGALFSHNGLSTRG
Trigger: ACCTCGGGTAGACAAACCGTTATGACTGAAAAGAGCACCTTCCAAAGTGTCGTTTCTGAATCTCCCCAGGAGGATAGTGCAGAGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS TCA 72 bp CTCCTGAGGCTGCTTGGTCCTTCGATGCTGATTAACTaGGAATGTGACATCGCTTTCTCCATAACCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLRLLGPSMLIN*ECDIAFSITFL
Trigger: GAGGAAGGTTATGGAGAAAGCGATGTCACATTCTCAGTTAATCAGCATCGAAGGACCAAGCAGCCTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS TCA 72 bp TACAGAATCTCCTATGACACCCAACTCCACCTTGTCTaGAAGTGGAGCTGTGAACTGGATTTGCCCACTGAA +
Preference number: 6 (lower is better)
Translates to: YRISYDTQLHLV*KWSCELDLPTE
Trigger: TTCAGTGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp GGCTTTGTTCGGATGGTTTCTGGTCTGTTTCTTTCTTaGTCCCTCGTGGCTTTCACTTCTGTTTTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: GFVRMVSGLFLS*SLVAFTSVFFP
Trigger: GGGAAAGAAAACAGAAGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACCAGAAACCATCCGAACAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp TTGTGGAATCTTCACCTATGTAAACGGGGACCTCCCTaGTATCTCCGGCTTTTGGTCTGTCAGGGAATGTTT +
Preference number: 6 (lower is better)
Translates to: LWNLHLCKRGPP*YLRLLVCQGMF
Trigger: AAACATTCCCTGACAGACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp AGGTTGATGATGTCTCCTATCATCTGCTCGGCTGACTaGCCTTTCAGCCCCACTTCCTTAATATCCTTGCTT +
Preference number: 6 (lower is better)
Translates to: RLMMSPIICSAD*PFSPTSLISLL
Trigger: AAGCAAGGATATTAAGGAAGTGGGGCTGAAAGGCAAGTCAGCCGAGCAGATGATAGGAGACATCATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 72 bp ATGTGTACAGAATCTCCTATGACACCCAACTCCACCTaGTCTGAAAGTGGAGCTGTGAACTGGATTTGCCCA +
Preference number: 6 (lower is better)
Translates to: MCTESPMTPNST*SESGAVNWICP
Trigger: TGGGCAAATCCAGTTCACAGCTCCACTTTCAGACAAGGTGGAGTTGGGTGTCATAGGAGATTCTGTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS GCA 72 bp CGTTACTCACATCCATCTGACGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATCTCTGGATTACTTTCT +
Preference number: 6 (lower is better)
Translates to: RYSHPSDGMFST*SAQITISGLLS
Trigger: AGAAAGTAATCCAGAGATAGTGATCTGGGCTGAGCACGTTGAAAACATGCCGTCAGATGGATGTGAGTAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328642.11
CDS GCA 72 bp TCAGAGGTTTCCGTTTCTGTAGGACCTAGTCGAATGTaGCTAAAGGATCTGCTAACACCCGATGTCATTTCT +
Preference number: 6 (lower is better)
Translates to: SEVSVSVGPSRM*LKDLLTPDVIS
Trigger: AGAAATGACATCGGGTGTTAGCAGATCCTTTAGGCACATTCGACTAGGTCCTACAGAAACGGAAACCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336292.11
CDS CAA 90 bp AATCTTCACCTATGTAAACGGGGACCTCCCTTGTATCTCCGGCTTTaGGTCTGTCAGGGAATGTTTTCACTTGAGCCTCAGTATTTCTTA +
Preference number: 6 (lower is better)
Translates to: NLHLCKRGPPLYLRL*VCQGMFSLEPQYFL
Trigger: TAAGAAATACTGAGGCTCAAGTGAAAACATTCCCTGACAGACCAAAAGCCGGAGATACAAGGGAGGTCCCCGTTTACATAGGTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS CAA 90 bp TTTCTCTTCTGGCTTTGTTCGGATGGTTTCTGGTCTGTTTCTTTCTaGCTCCCTCGTGGCTTTCACTTCTGTTTTCTTTCCCAGAATGAC +
Preference number: 6 (lower is better)
Translates to: FLFWLCSDGFWSVSF*LPRGFHFCFLSQND
Trigger: GTCATTCTGGGAAAGAAAACAGAAGTGAAAGCCACGAGGGAGCAAGAAAGAAACAGACCAGAAACCATCCGAACAAAGCCAGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2
CDS GCA 72 bp GATTTGTTTCTGAATTCTGACGGCATGTTTTCAACGTaGTCAGCCCAGATCACTATCTCTGGATTACTTTCT +
Preference number: 6 (lower is better)
Translates to: DLFLNSDGMFST*SAQITISGLLS
Trigger: AGAAAGTAATCCAGAGATAGTGATCTGGGCTGAGCACGTTGAAAACATGCCGTCAGAATTCAGAAACAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336292.11
ENST00000560674.5
ENST00000594047.2