RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNJ2 (Homo sapiens)

Ensembl gene IDs: ENSG00000078269

Ensembl transcript IDs: ENST00000355585.9, ENST00000367112.1, ENST00000367113.5, ENST00000367122.6, ENST00000449320.2, ENST00000485863.1, ENST00000638626.1, ENST00000640338.1, ENST00000640569.1

Found 1141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCCCGAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTaGGGAAGCCTCAGGAAACGAAGGAGGGCTGGGCTGTCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: RARVTEHCRVHWSEC*GSLRKRRRAGLSAP
Trigger: TGGAGCTGACAGCCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR GCA 90 bp ATCAGGGCCCGAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATaGTGGGGAAGCCTCAGGAAACGAAGGAGGGCTGGGCTGTCAGCT +
Preference number: 1 (lower is better)
Translates to: IRARVTEHCRVHWSE*WGSLRKRRRAGLSA
Trigger: AGCTGACAGCCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR CCA 90 bp GGCAAATGTATCAGGGCCCGAGTCACTGAGCACTGCCGTGTTCACTaGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGGAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: GKCIRARVTEHCRVH*SECWGSLRKRRRAG
Trigger: CCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGATACATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR GCA 90 bp CTTCCCACCTTTGGCAAATGTATCAGGGCCCGAGTCACTGAGCACTaGCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGA +
Preference number: 1 (lower is better)
Translates to: LPTFGKCIRARVTEH*RVHWSECWGSLRKR
Trigger: TCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGATACATTTGCCAAAGGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR TCA 90 bp CAGCTTTTAGGACAGACATCCCCCAGTCACGTAAGGGATGACACTTaGTCACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAAC +
Preference number: 1 (lower is better)
Translates to: QLLGQTSPSHVRDDT*SLLCEPLYEAPRYN
Trigger: GTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCATCCCTTACGTGACTGGGGGATGTCTGTCCTAAAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 90 bp GGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTCAAGAGGGTCTCCAATTTCTCTAGC +
Preference number: 1 (lower is better)
Translates to: GLTFSPFVNTSKSSQ*SFNCGLKRVSNFSS
Trigger: GCTAGAGAAATTGGAGACCCTCTTGAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR GCA 90 bp TGCCCAGCCTTGATTCACGTGCATTTTGAAGTCTGGGCACATTACTaGCCCCAAATATCCACAATACCAGAGAACCAAAGAGGATGTGGG +
Preference number: 1 (lower is better)
Translates to: CPALIHVHFEVWAHY*PQISTIPENQRGCG
Trigger: CCCACATCCTCTTTGGTTCTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCACGTGAATCAAGGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
3UTR CCA 90 bp TGCCACCAACGGCATCCTGATCACCTAAACACCGCCTTTTATGACTaGTCAACTATGCATCTTATCTGTCTAGCTCTGTGGGTCACGGAT +
Preference number: 1 (lower is better)
Translates to: CHQRHPDHLNTAFYD*STMHLICLALWVTD
Trigger: ATCCGTGACCCACAGAGCTAGACAGATAAGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTTAGGTGATCAGGATGCCGTTGGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 90 bp GGGGTCAGAGAGACAATGGTGAGTTGTGAAGTACCTAAACCAGTCTaGGTGAACTGCACCATGTTAGAGAACAGCAGGAACAAAATAGGC +
Preference number: 1 (lower is better)
Translates to: GVRETMVSCEVPKPV*VNCTMLENSRNKIG
Trigger: GCCTATTTTGTTCCTGCTGTTCTCTAACATGGTGCAGTTCACGCAGACTGGTTTAGGTACTTCACAACTCACCATTGTCTCTCTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR TCA 90 bp CACATAGCACTTTCCATCCCGAAGCTCCAGCCGGACAGACGAGGCTaGAACACTCTCCATATTCTAACAATGAGAATCAATATCGCGTAT +
Preference number: 1 (lower is better)
Translates to: HIALSIPKLQPDRRG*NTLHILTMRINIAY
Trigger: ATACGCGATATTGATTCTCATTGTTAGAATATGGAGAGTGTTTCAGCCTCGTCTGTCCGGCTGGAGCTTCGGGATGGAAAGTGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 90 bp AGCGATGTGCATCTTGGCAAATCAGCTTCTCCAAGGAACCCATCTTaGTCTCTCCCCCAAACTCTGTTAAGGACCATTCTGTTTATTTCT +
Preference number: 1 (lower is better)
Translates to: SDVHLGKSASPRNPS*SLPQTLLRTILFIS
Trigger: AGAAATAAACAGAATGGTCCTTAACAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGATTTGCCAAGATGCACATCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR TCA 90 bp TATAGACAAACATATAGACAAGCAAACCCAGAAACACTGGCCTGGTaGTTCTTATATGCAGGGACACATAGCACTTTCCATCCCGAAGCT +
Preference number: 1 (lower is better)
Translates to: YRQTYRQANPETLAW*FLYAGTHSTFHPEA
Trigger: AGCTTCGGGATGGAAAGTGCTATGTGTCCCTGCATATAAGAATCACCAGGCCAGTGTTTCTGGGTTTGCTTGTCTATATGTTTGTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 90 bp TCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATaGATGGAATATAAGCGGAACAAAGGATCCGTGAGGTTTCATTTA +
Preference number: 1 (lower is better)
Translates to: SRISKSFRTVCFYVV*MEYKRNKGSVRFHL
Trigger: TAAATGAAACCTCACGGATCCTTTGTTCCGCTTATATTCCATGCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 90 bp CTGAATAAGAGACACGATTTTTGTAAACTACACGAGAGTGACAGATaGACAAACGTTTTGGCCAGTGTGCCTTTAAATAGATGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: LNKRHDFCKLHESDR*TNVLASVPLNRCLF
Trigger: GAAGAGACATCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTGTAGTTTACAAAAATCGTGTCTCTTATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp CTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACAGTTCATCCGCAAAGTGCCCGAGTCACTGAGCACTaGCGTGTTCACTGGTCGGAA +
Preference number: 2 (lower is better)
Translates to: LHSVGSVQAVKTVHPQSARVTEH*RVHWSE
Trigger: TTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCG...GGCACTTTGCGGATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR TCA 90 bp TTTCTGAAAACGTGGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCTTCCAGGGCCCGAGTCACTaGGCACTGCCGTGTTCACTG +
Preference number: 2 (lower is better)
Translates to: FLKTWTDVLPLCEHIEVFQGPSH*ALPCSL
Trigger: CAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTG...GAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCCACGTTTTCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR CCA 90 bp TTTGTGAACACATCGAAGTCTTCCCAGTGCAGCTTTAACTGTGGCCTCAAGAGGGAAACGAAGGAGGGCTaGGCTGTCAGCTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: FVNTSKSSQCSFNCGLKRETKEG*AVSSSP
Trigger: GGGACTGGAGCTGACAGCCCAGCCCTCCTTCGTTTC...CCTCTTGAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR CCA 90 bp GGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCTTCCCAGTGCAGCTTTCTAGCTTCCCACCTTTaGCAAATGTATCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: GLTFSPFVNTSKSSQCSFLASHL*QMYQGP
Trigger: CGGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAG...AAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAACATCAACCTTCAGGTaGCTCCCCAAAATGTTATAC +
Preference number: 2 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVTSTFR*LPKMLY
Trigger: GTATAACATTTTGGGGAGCCACCTGAAGGTTGATGT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp TTTGTGAACACATCGAAGTCTTCCCAGTGCAGCTTTAACTGTGGCCTCAAGAGGGTTCACTGGTCGGAATaGTGGGGAAGCCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FVNTSKSSQCSFNCGLKRVHWSE*WGSLRK
Trigger: TTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAAC...CCTCTTGAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR GCA 90 bp GTCAAGACAGTTCATCCGCAAAGTGCCTTTCTGAAAACGTGGACTGACGTTCTCTCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VKTVHPQSAFLKTWTDVLSKSSQ*SFNCGL
Trigger: GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGA...GAGAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAAATCAACCCTGCTGCTaGCCTGGGAATCCTACCAAC +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLNQPCC*PGNPTN
Trigger: GTTGGTAGGATTCCCAGGTCAGCAGCAGGGTTGATT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp GTGCATTTTGAAGTCTGGGCACATTACTGCCCCCAAATATCCACAATACCAGAGTCAGGAATTCACTTCTaGGGAATCCAAAGCACCAAG +
Preference number: 2 (lower is better)
Translates to: VHFEVWAHYCPQISTIPESGIHF*GIQSTK
Trigger: CTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGA...CTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367113.5
3UTR CAA 90 bp CACGATTTTTGTAAACTACACGAGAGTGACAGATGCACAAACGTTTaGGCCAGTGTGCCTTTAAATAGATGTCTCTTCTGGTGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: HDFCKLHESDRCTNV*ASVPLNRCLFWWRD
Trigger: ATCCCTCCACCAGAAGAGACATCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTGTAGTTTACAAAAATCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCCACCAACGGCATCCTaGTCACCTAAACACCGCCTT +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKPPTAS*SPKHRL
Trigger: AAGGCGGTGTTTAGGTGATCAGGATGCCGTTGGTGG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACGAAAACACGGTATCTaGTCCAAATGGATTCCAGAC +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLRKHGI*SKWIPD
Trigger: GTCTGGAATCCATTTGGAGCAGATACCGTGTTTTCG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAAAACACCGCCTTTTATaGCTGGTCAACTATGCATCT +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLKHRLL*LVNYAS
Trigger: AGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAATGACACTTGATCACTaGTGTGCGAGCCTCTGTACG +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEMTLDH*CASLCT
Trigger: CGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCAT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATATAAAGCACGTAAATaGCACCAACGGCATCCTGAT +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLYKARK*HQRHPD
Trigger: ATCAGGATGCCGTTGGTGGCATTTACGTGCTTTATA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAACCCTGCTGCTGACCTaGGAATCCTACCAACTAGTA +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGETLLLT*ESYQLV
Trigger: TACTAGTTGGTAGGATTCCCAGGTCAGCAGCAGGGT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGAAACACTGGCCTGGTaGTTCTTATATGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSETLAW*FLYAGT
Trigger: TGTCCCTGCATATAAGAATCACCAGGCCAGTGTTTC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATTTCCCCTGCTTCTTTaGCTGGTTGTTACATTTATC +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLFPLLL*LVVTFI
Trigger: GATAAATGTAACAACCAGTCAAAGAAGCAGGGGAAA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGCAATGTCTAAGACATaGCACAGGAGCCTTCAGCTA +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEAMSKT*HRSLQL
Trigger: TAGCTGAAGGCTCCTGTGCCATGTCTTAGACATTGC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTTGGTAACAAGACAGTaGCATAGCCCAGGCAAGATG +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKLVTRQ*HSPGKM
Trigger: CATCTTGCCTGGGCTATGCCACTGTCTTGTTACCAA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGTCTTTTTCAGTTATTaGATAGGTGAGAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLVFFSY*IGEKCC
Trigger: ACAGCACTTCTCACCTATTCAATAACTGAAAAAGAC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATGGGTGAGAACTTCTTaGACCTCATTGGCTAGATTC +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEWVRTS*TSLARF
Trigger: GAATCTAGCCAATGAGGTCCAAGAAGTTCTCACCCA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCACAATAAGAAGCCCTaGATGGTAGCATCAAAGACG +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKHNKKP*MVASKT
Trigger: CGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGACATCAACCTTCAGGTaGCTCCCCAAAATGTTATAC +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKTSTFR*LPKMLY
Trigger: GTATAACATTTTGGGGAGCCACCTGAAGGTTGATGT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCAAACCCAGAAACACTaGCCTGGTGATTCTTATATG +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKQTQKH*PGDSYM
Trigger: CATATAAGAATCACCAGGCCAGTGTTTCTGGGTTTG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATGTACAAGCCTTGAGTaGAATATATTTTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGECTSLE*NIFWWL
Trigger: CAGCCACCAAAATATATTTCACTCAAGGCTTGTACA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTGTACAAGCCTTGAGTaGAATATATTTTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSCTSLE*NIFWWL
Trigger: CAGCCACCAAAATATATTTCACTCAAGGCTTGTACA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACCATCACGTACAACATaGACTGAACAGCCATTTAAA +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEPSRTT*TEQPFK
Trigger: TTTAAATGGCTGTTCAGTTCATGTTGTACGTGATGG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATTTCCCCTGCTTCTTTaGCTGGTTGTTACATTTATC +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEFPLLL*LVVTFI
Trigger: GATAAATGTAACAACCAGTCAAAGAAGCAGGGGAAA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGTTTTCGCACTGTGTaGTTTTATGTGGTATGCATG +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESFRTV*FYVVCM
Trigger: CATGCATACCACATAAAAGCACACAGTGCGAAAACT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAACCGCCTTTTATGACTaGTCAACTATGCATCTTATC +
Preference number: 2 (lower is better)
Translates to: SERFDTLLCLYLHTHQGETAFYD*STMHLI
Trigger: GATAAGATGCATAGTTGACCAGTCATAAAAGGCGGT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTTCAGTAGCACACCATaGCTCAGGATTATAGTAATT +
Preference number: 2 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSFSSTP*LRIIVI
Trigger: AATTACTATAATCCTGAGCCATGGTGTGCTACTGAA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCCCTGCTTCTTTGACTaGTTGTTACATTTATCTGTT +
Preference number: 2 (lower is better)
Translates to: LLCALNFNNVKPLQELLKPCFFD*LLHLSV
Trigger: AACAGATAAATGTAACAACCAGTCAAAGAAGCAGGG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 72 bp CGAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATaGTGGGGAAGCCTCAGGAAACGAAGGAGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: RVTEHCRVHWSE*WGSLRKRRRAG
Trigger: CCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR CCA 72 bp GTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTaGGGAAGCCTCAGGAAACGAAGGAGGGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: VTEHCRVHWSEC*GSLRKRRRAGL
Trigger: CAGCCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR CCA 72 bp ATCAGGGCCCGAGTCACTGAGCACTGCCGTGTTCACTaGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGG +
Preference number: 3 (lower is better)
Translates to: IRARVTEHCRVH*SECWGSLRKRR
Trigger: CCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR TCA 72 bp TCCCACCTTTGGCAAATGTATCAGGGCCCGAGTCACTaGGCACTGCCGTGTTCACTGGTCGGAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SHLWQMYQGPSH*ALPCSLVGMLG
Trigger: CCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGATACATTTGCCAAAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR GCA 72 bp TTTGGCAAATGTATCAGGGCCCGAGTCACTGAGCACTaGCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: FGKCIRARVTEH*RVHWSECWGSL
Trigger: GAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTGATACATTTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR TCA 72 bp GCTTTTAGGACAGACATCCCCCAGTCACGTAAGGGATaGCACTTGATCACTGCTGTGCGAGCCTCTGTACGA +
Preference number: 3 (lower is better)
Translates to: AFRTDIPQSRKG*HLITAVRASVR
Trigger: TCGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCATCCCTTACGTGACTGGGGGATGTCTGTCCTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 72 bp TTCTCCCCCTTTGTGAACACATCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTCAAGAGGGTCTCCAAT +
Preference number: 3 (lower is better)
Translates to: FSPFVNTSKSSQ*SFNCGLKRVSN
Trigger: ATTGGAGACCCTCTTGAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
3UTR GCA 72 bp CATCTTGGCAAATCAGCTTCTCCAAGGAACCCATCTTaGTCTCTCCCCCAAACTCTGTTAAGGACCATTCTG +
Preference number: 3 (lower is better)
Translates to: HLGKSASPRNPS*SLPQTLLRTIL
Trigger: CAGAATGGTCCTTAACAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGATTTGCCAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR CCA 72 bp CCATGCCCAGCCTTGATTCACGTGCATTTTGAAGTCTaGGCACATTACTGCCCCCAAATATCCACAATACCA +
Preference number: 3 (lower is better)
Translates to: PCPALIHVHFEV*AHYCPQISTIP
Trigger: TGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCACGTGAATCAAGGCTGGGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367113.5
3UTR TCA 72 bp CTTTCCATCCCGAAGCTCCAGCCGGACAGACGAGGCTaGAACACTCTCCATATTCTAACAATGAGAATCAAT +
Preference number: 3 (lower is better)
Translates to: LSIPKLQPDRRG*NTLHILTMRIN
Trigger: ATTGATTCTCATTGTTAGAATATGGAGAGTGTTTCAGCCTCGTCTGTCCGGCTGGAGCTTCGGGATGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR CCA 72 bp CGGCATCCTGATCACCTAAACACCGCCTTTTATGACTaGTCAACTATGCATCTTATCTGTCTAGCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: RHPDHLNTAFYD*STMHLICLALW
Trigger: CCACAGAGCTAGACAGATAAGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTTAGGTGATCAGGATGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAGTCTAGTCATTAGGTaGACCTATTTGGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSLVIR*TYLAAS
Trigger: GGAAGCAGCCAAATAGGTCAACCTAATGACTAGACT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR GCA 72 bp TTGATTCACGTGCATTTTGAAGTCTGGGCACATTACTaGCCCCAAATATCCACAATACCAGAGAACCAAAGA +
Preference number: 3 (lower is better)
Translates to: LIHVHFEVWAHY*PQISTIPENQR
Trigger: TCTTTGGTTCTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCACGTGAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
3UTR GCA 72 bp AGACACGATTTTTGTAAACTACACGAGAGTGACAGATaGACAAACGTTTTGGCCAGTGTGCCTTTAAATAGA +
Preference number: 3 (lower is better)
Translates to: RHDFCKLHESDR*TNVLASVPLNR
Trigger: TCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTGTAGTTTACAAAAATCGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCATTAGGTTGACCTATTaGGCTGCTTCCGACTCTGAT +
Preference number: 3 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSIRLTY*AASDSD
Trigger: ATCAGAGTCGGAAGCAGCCAAATAGGTCAACCTAAT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAATAGCGATGTGCATCTaGGCAAATCAGCTTCTCCAA +
Preference number: 3 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEIAMCI*ANQLLQ
Trigger: TTGGAGAAGCTGATTTGCCAAGATGCACATCGCTAT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR CCA 72 bp AGATGGTGGATAAAAATTGGTTTCAGTAGCACACCATaGCTCAGGATTATAGTAATTGATAGGGCATGCAAT +
Preference number: 3 (lower is better)
Translates to: RWWIKIGFSSTP*LRIIVIDRACN
Trigger: ATTGCATGCCCTATCAATTACTATAATCCTGAGCCATGGTGTGCTACTGAAACCAATTTTTATCCACCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGATGCACAAACGTTTaGGCCAGTGTGCCTTTAAAT +
Preference number: 3 (lower is better)
Translates to: SERFDTLLCLYLHTHQGERCTNV*ASVPLN
Trigger: ATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
3UTR TCA 72 bp TTACACACACATCAGGGAGAATTTTATTATGTGCCTTaGACTTCAACAACGTTAAACCGTTACAGGAATTGC +
Preference number: 3 (lower is better)
Translates to: LHTHQGEFYYVP*TSTTLNRYRNC
Trigger: GCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAAAATTCTCCCTGATGTGTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGCTGGGGAAGCCTCAGGAAACGAAGGAGGGCTGGGCTGTCAGCTCCAGTCCCCGCCCAGCCCAGCTGTaGAGAGGACAGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: MLGKPQETKEGWAVSSSPRPAQL*RGQPGL
Trigger: AAGGCCAGGCTGTCCTCTCCACAGCTGGGCTGGGCG...GGGACTGGAGCTGACAGCCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp CACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGGAGGCTCAACGCTCCACCATaGCCACCTGCCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HCRVHWSECWGSLRKRRRLNAPP*PPAAQP
Trigger: GGGCTGGGCGGCAGGTGGCCATGGTGGAGCGTTGAG...CCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACTTGTGGGAAGACGGTaGCCGCGGCAGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVLVGRR*PRQVGA
Trigger: GGCACCCACCTGCCGCGGGCACCGTCTTCCCACAAG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACGGCGCCTCCAGAGGTaGTGGCACAGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVRRLQR*WHRGSC
Trigger: GCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGTCTCTGCGGGGGTTaGGGTGGCCGAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGLCGG*GGRGRL
Trigger: CAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCCAGCGTGGCCACCGTaGCGGCCTCGAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAPAWPP*RPRTAG
Trigger: GCCTGCTGTTCGAGGCCGGCACGGTGGCCACGCTGG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355585.9
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCAGCGTGGCCACCGTaGCGGCCTCGAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPAWPP*RPRTAG
Trigger: GCCTGCTGTTCGAGGCCGGCACGGTGGCCACGCTGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATCACCAGGAGCGCCGTaGTGTCCAGCAGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVSPGAP*CPAACP
Trigger: GGGGCATGCTGCTGGACAGCACGGCGCTCCTGGTGA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACAGGGCCCGAGTCACTaGGCACTGCCGTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: VTEHCRVHWSECWGSLRKQGPSH*ALPCSL
Trigger: CAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCTG...TTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGCTGGGAGGAGCCAGTaGTGTGGGGCCGGGGACATC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHAGRSQ*CGAGDI
Trigger: GATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTTCTGGAGCCAGCGTaGCCACCGTGCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLLEPA*PPCRPR
Trigger: TCGAGGCCGGCACGGTGGCCACGCTGGCTCCAGAAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTCGAGCGCGATGAAGCTCTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACATTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: LERDEALHSVGSVQAVKTFTPRV*KRVPVR
Trigger: GCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAA...TGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAGCCAACCTGAAGCCCTaGCTGTTCCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: ESLSTAVFTGRNAGEASGANLKP*LFPEQR
Trigger: CCGCTGTTCTGGGAACAGCCAGGGCTTCAGGTTGGC...TCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGCGTGTCGCCCGCGTaGCAAGAAGCCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGVSPA*QEAQSS
Trigger: GCTGCTCTGGGCTTCTTGCCACGCGGGCGACACGCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGTGGCCGAGGCCGGTTaGGGACCGACAGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAVAEAG*GPTETC
Trigger: GCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCAC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGTGGCCGAGGCCGGTTaGGGACCGACAGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLVAEAG*GPTETC
Trigger: GCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCAC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATGGCTGCCCCCGGTGTaGGCTCTGGTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVWLPPV*ALVQRM
Trigger: CATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGGCAGGAACTCTGGGTaGGGGCCGACGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHGRNSG*GPTGKE
Trigger: CTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCTTTGCTCAGGGCCATaGGGGTCGGGCCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLCSGP*GSGPLR
Trigger: CCGCAGTGGGCCCGACCCTCATGGCCCTGAGCAAAG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355585.9
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGGGCTCTGCTGCCTGTaGACACCTTGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVGLCCL*TPCSGC
Trigger: ACAGCCTGAGCAAGGTGTTCACAGGCAGCAGAGCCC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACCACGTCCAGGACACTaGGAGCCGAGTGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVPRPGH*EPSDCL
Trigger: CAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAALPAPA*APPGPR
Trigger: ACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLELPAPA*APPGPR
Trigger: ACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCCCAGCGTGGCCACCGTaGCGGCCTCGAACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FFRQKSGIHFWGIQSTKAPAWPP*RPRTAG
Trigger: GCCTGCTGTTCGAGGCCGGCACGGTGGCCACGCTGG...GGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAGGTTCACGACCACCTaGTGCCCGTACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ESLSTAVFTGRNAGEASGRFTTT*CPYCSF
Trigger: GAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCT...TCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATCACCAGGAGCGCCGTaGTGTCCAGCAGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLESPGAP*CPAACP
Trigger: GGGGCATGCTGCTGGACAGCACGGCGCTCCTGGTGA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGGTCTCTGGTTTGGCTaGCCCCGGTGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHGLWFG*PRCGLW
Trigger: CCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGTAGCTCCCGAGAGCTaGGGCGAGTCGAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEVAPES*GESSSQ
Trigger: CTGGCTGCTCGACTCGCCCCAGCTCTCGGGAGCTAC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATTCCGCTCCTTCACCTaGGACTGCCCGGCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEFRSFT*DCPAVR
Trigger: CCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLLLGER*RNSPTA
Trigger: AGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGTGGCCGAGGCCGGTTaGGGACCGACAGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFVAEAG*GPTETC
Trigger: GCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCAC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCGCCTGTGGGGTCTCTaGTTTGGCTGCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAARLWGL*FGCPRC
Trigger: ACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACGCCTGTGGGGTCTCTaGTTTGGCTGCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRLWGL*FGCPRC
Trigger: ACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAGTGGGGGCGCCTGTaGGGTCTCTGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLEWGRL*GLWFGC
Trigger: GCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAAGAAACGAAGGAGGGCTaGGCTGTCAGCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: VTEHCRVHWSECWGSLRKETKEG*AVSSSP
Trigger: GGGACTGGAGCTGACAGCCCAGCCCTCCTTCGTTTC...TTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACCCGGCTTGCCAAGCTaGCTTCCCACCCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVPGLPS*LPTHSK
Trigger: TTTGGAGTGGGTGGGAAGCCAGCTTGGCAAGCCGGG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATCAGCTCCGCCGTCCTaGGCACGTTGCTCCGGAACT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLESAPPS*ARCSGT
Trigger: AGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGCCAGCACAGGTCTGTaGTCAGACGCTTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVASTGL*SDACSS
Trigger: GGAGCTACAAGCGTCTGATCACAGACCTGTGCTGGC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGTCTCTGCGGGGGTTaGGGTGGCCGAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGLCGG*GGRGRL
Trigger: CAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GACACAGGGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTCCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: DTGMWGGSPSSGRNQEFTPPASA*GQSGQS
Trigger: GCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGG...AGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCCCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCAGCAGCTCACCTGGTaGTGCCTCAAGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHQQLTW*CLKGTC
Trigger: GCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGGAGGGCTTTCACGACCACCTGCTaGCCGTACTGCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CRVHWSECWGSLRKRRRAFTTTC*PYCSFR
Trigger: TCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAA...AGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACCTTGTTCCCCGCCTTaGCCCCCATGCCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEPCSPP*PPCPSS
Trigger: TGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGGAACTGGAAGCGGATaGCGACGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEGTGSG*RRRPCS
Trigger: GGAACAAGGGCGCCGTCGGCATCCGCTTCCAGTTCC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCTGGGAGGAGCCAGTaGTGTGGGGCCGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAAGRSQ*CGAGDI
Trigger: GATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGGACCGACAGAGACCTaGTCGGAGAACGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHGPTET*SENGGG
Trigger: TCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTGGCACAGAGGCTCCTaGCCCAGGAGGGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFWHRGS*PRRGFV
Trigger: GACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCTTGTGGGAAGACGGTaGCCGCGGCAGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLVGRR*PRQVGA
Trigger: GGCACCCACCTGCCGCGGGCACCGTCTTCCCACAAG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGGAGGGCTGGGCTGGTTCACTGGTCGGAATaGTGGGGAAGCCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VHWSECWGSLRKRRRAGLVHWSE*WGSLRK
Trigger: TTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAAC...CAGCCCAGCCCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLALACL*EAYTVR
Trigger: CCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAFTPRV*KRVPVR
Trigger: GCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEFTPRV*KRVPVR
Trigger: GCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGCGTGTCGCCCGCGTaGCAAGAAGCCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGVSPA*QEAQSS
Trigger: GCTGCTCTGGGCTTCTTGCCACGCGGGCGACACGCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGGCTGCTGTCATCCTaGGAGTCGGTAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGLLSS*ESVAPE
Trigger: CTCGGGAGCTACCGACTCCCAGGATGACAGCAGCCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTGGTGCTGTGGAACTaGAAGCGGATGCCGACGGCG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLVLWN*KRMPTA
Trigger: CGCCGTCGGCATCCGCTTCCAGTTCCACAGCACCAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTTCCGCTCCTTCACCTaGGACTGCCCGGCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFFRSFT*DCPAVR
Trigger: CCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGAGGAGCCAGTGCTGTaGGGCCGGGGACATCAGAGA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEEEPVL*GRGHQR
Trigger: TCTCTGATGTCCCCGGCCCCACAGCACTGGCTCCTC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCGGAGGCACCTCCTCTaGCTTCCAGGAGACACCGGA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHRRHLL*LPGDTG
Trigger: TCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACCCCGGTGTGGGCTCTaGTTCAGAGGATGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVPRCGL*FRGCFK
Trigger: CTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATGGCTGCCCCCGGTGTaGGCTCTGGTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEWLPPV*ALVQRM
Trigger: CATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGGCAGGAACTCTGGGTaGGGGCCGACGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAGRNSG*GPTGKE
Trigger: CTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGCAGGAACTCTGGGTaGGGGCCGACGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGRNSG*GPTGKE
Trigger: CTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCGGCGCCTCCAGAGGTaGTGGCACAGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQRRLQR*WHRGSC
Trigger: GCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTCCTCGGGGGTACCTTaGGCACAAGAGGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSSGVP*AQEAAP
Trigger: AGGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGAGAAAGTCCCCTTGTaGGAAGACGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAEKVPL*EDGARG
Trigger: GCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTCGAGCGCGATGAAGCTCTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACACACTGCCGTGTTCACTaGTCGGAATGCTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LERDEALHSVGSVQAVKTHCRVH*SECWGS
Trigger: GCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTG...TGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGGACCTCGAGCGCGATaGAGCTCTGCACAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEGPRAR*SSAQCW
Trigger: CCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGGGCTCTGCTGCCTGTaGACACCTTGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEGLCCL*TPCSGC
Trigger: ACAGCCTGAGCAAGGTGTTCACAGGCAGCAGAGCCC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACCACGTCCAGGACACTaGGAGCCGAGTGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLPRPGH*EPSDCL
Trigger: CAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGAAGGCTGCGGGGGCTaGCTTCTTCCTCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAEGCGG*LLPPRG
Trigger: CCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGAAGGCTGCGGGGGCTaGCTTCTTCCTCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYREGCGG*LLPPRG
Trigger: CCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGAAGGCTGCGGGGGCTaGCTTCTTCCTCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKEGCGG*LLPPRG
Trigger: CCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACACTGCTATTGTAAGTaGGGCCCTGGAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVHCYCK*GPGEAG
Trigger: GCCAGCTTCTCCAGGGCCTCACTTACAATAGCAGTG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAGCACCAAGGCCAGATaGAAACCTGTGGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GCGEGPLLPAEIRNSLLGSTKAR*KPVAAS
Trigger: TGAGGCAGCCACAGGTTTTCATCTGGCCTTGGTGCT...CCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLPPASA*GQSGQS
Trigger: GCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEELSSP*FCVRTV
Trigger: GACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCAGCTCACCTGGTGCTaGCTCAAGGGCACGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHQLTWC*LKGTCN
Trigger: GTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAGGCAGGCCTTGGCCTaGTTGTGGGAGGCATACACG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHRQALA*LWEAYT
Trigger: CGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACCCAGGGTCTTGAGCTaGAGATGCAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEPRVLS*RCRTSS
Trigger: GCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCATGCCCCCTTTGTCTaGCACCTCCTCGCCGTAGAC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAHAPFV*HLLAVD
Trigger: GTCTACGGCGAGGAGGTGGCAGACAAAGGGGGCATG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACATGCCCCCTTTGTCTaGCACCTCCTCGCCGTAGAC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEHAPFV*HLLAVD
Trigger: GTCTACGGCGAGGAGGTGGCAGACAAAGGGGGCATG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGCTGGGAGGAGCCAGTaGTGTGGGGCCGGGGACATC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRAGRSQ*CGAGDI
Trigger: GATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACAGGAGACACCGGATTaGTGCTTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEQETPD*CFCLLG
Trigger: GCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATGGCACAGAGGCTCCTaGCCCAGGAGGGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAWHRGS*PRRGFV
Trigger: GACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCTTGTGGGAAGACGGTaGCCGCGGCAGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLVGRR*PRQVGA
Trigger: GGCACCCACCTGCCGCGGGCACCGTCTTCCCACAAG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGGGTGTACCCGTGGTaGTCTTGGCAGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGVYPW*SWQAQA
Trigger: GGCCTGTGCCTGCCAAGAGCACCACGGGTACACCCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp GGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAGGCGTGAGCTACCATaGCCAGCCTTGATTCACGTG +
Preference number: 4 (lower is better)
Translates to: GCGEGPLLPAEIRNSLLGRRELP*PALIHV
Trigger: CACGTGAATCAAGGCTGGGCATGGTAGCTCACGCCT...CCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCTTCTGGAGCCAGCGTaGCCACCGTGCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALLEPA*PPCRPR
Trigger: TCGAGGCCGGCACGGTGGCCACGCTGGCTCCAGAAG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355585.9
CDS-3UTR CCA 90 bp GGCACATTACTGCCCCCAAATATCCACAATACCAGAGAACCAAAGAGGATGTGGCTTCTGGAGCCAGCGTaGCCACCGTGCCGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GTLLPPNIHNTREPKRMWLLEPA*PPCRPR
Trigger: TCGAGGCCGGCACGGTGGCCACGCTGGCTCCAGAAG...CCACATCCTCTTTGGTTCTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp AGGGTCTCCAATTTCTCTAGCTTCCCACCTTTGGCAAATGTATCAGGGCCCGAGGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RVSNFSSFPPLANVSGPEALACL*EAYTVR
Trigger: CCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGC...CTCGGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAGAGAAATTGGAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGCCAACCTGAAGCCCTaGCTGTTCCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEANLKP*LFPEQR
Trigger: CCGCTGTTCTGGGAACAGCCAGGGCTTCAGGTTGGC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGTAGCTCCCGAGAGCTaGGGCGAGTCGAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAVAPES*GESSSQ
Trigger: CTGGCTGCTCGACTCGCCCCAGCTCTCGGGAGCTAC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAACAGGAGTTGGCAGTaGGAGACACGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAANRSWQ*ETRGPC
Trigger: GCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAACAGGAGTTGGCAGTaGGAGACACGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHNRSWQ*ETRGPC
Trigger: GCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCAGCAAACAGGAGTTaGCAGTGGGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPANRS*QWETRG
Trigger: CCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGAGCAGGTGACTTGCTaGGAGGAGCCAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAEQVTC*EEPVLW
Trigger: CCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAGCAGGTGACTTGCTaGGAGGAGCCAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLEQVTC*EEPVLW
Trigger: CCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLLGER*RNSPTA
Trigger: AGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALLGER*RNSPTA
Trigger: AGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGGGTGCCGGAGGAGATaGACGCATCTGAAGCCGACT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEGCRRR*THLKPT
Trigger: AGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCGGAGGCACCTCCTCTaGCTTCCAGGAGACACCGGA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFRRHLL*LPGDTG
Trigger: TCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCGCCTCCAGAGGTGGTaGCACAGAGGCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTRLQRW*HRGSCP
Trigger: GGGGCAGGAGCCTCTGTGCCACCACCTCTGGAGGCG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATGCAGGACCTGCAGGTaGAAGGCTGCGGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTACRTCR*KAAGAD
Trigger: GTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGAGAAAGTCCCCTTGTaGGAAGACGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFEKVPL*EDGARG
Trigger: GCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGTGTTCATGATCTGGTaGCAGCTCTGCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVVFMIW*QLCLGS
Trigger: GCTGCCAAGGCAGAGCTGCCACCAGATCATGAACAC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGACCCAGGGGCTCAGTaGGGAGGTCAGTTCAACGCC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFDPGAQ*GGQFNA
Trigger: GGCGTTGAACTGACCTCCCCACTGAGCCCCTGGGTC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp AGCTTCCCACCTTTGGCAAATGTATCAGGGCCCGAGTCACTGAGCACTGCCGTGCACTGGTCGGAATGCTaGGGAAGCCTCAGGAAACGA +
Preference number: 4 (lower is better)
Translates to: SFPPLANVSGPESLSTAVHWSEC*GSLRKR
Trigger: TCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTG...CACGGCAGTGCTCAGTGACTCGGGCCCTGATACATTTGCCAAAGGTGGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCCGTACGCGTCCGTaGGCTTGCCATACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSRTRP*ACHTVL
Trigger: AAGGACAGTATGGCAAGCTCACGGACGCGTACGGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACGTTCTCCCCCTTTGTaGACACATCGAAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVRSPPL*THRSLP
Trigger: GGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTCGAGCGCGATGAAGCTCTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACACGTTCTCCCCCTTTGTaGACACATCGAAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LERDEALHSVGSVQAVKTRSPPL*THRSLP
Trigger: GGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACG...TGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGTCAACGATGGGTTTTaGACTCAGCCCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVVNDGF*TQPQGL
Trigger: AAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGAC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGCCAGCACAGGTCTGTaGTCAGACGCTTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAASTGL*SDACSS
Trigger: GGAGCTACAAGCGTCTGATCACAGACCTGTGCTGGC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGCCAGCACAGGTCTGTaGTCAGACGCTTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLASTGL*SDACSS
Trigger: GGAGCTACAAGCGTCTGATCACAGACCTGTGCTGGC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATCCCCAAGGTCTGCATaGGCTCAGTACGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLESPRSA*AQYAGP
Trigger: AGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCACGTCCAGGACACTaGGAGCCGAGTGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPRPGH*EPSDCL
Trigger: CAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAALPAPA*APPGPR
Trigger: ACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGCCTTGGGAGGTTGCTaGGGTGCTCCTGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEALGGC*GAPGRS
Trigger: ACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCATCCCCCTGCTTCTaGGTGCGGACAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSSPCF*VRTVRS
Trigger: TGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAAGGTTCACGACCACCTaGTGCCCGTACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLERFTTT*CPYCSF
Trigger: GAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGTCTTGAGCTGCAGATaGAGGACCTCGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLVLSCR*RTSSAM
Trigger: CATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGAC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACTGTCCAGGCGGGGGTaGGGCATTTGTCGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLELSRRG*GICRLY
Trigger: ATACAAGCGACAAATGCCGCACCCCCGCCTGGACAG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGACCGACAGAGACCTaGTCGGAGAACGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGPTET*SENGGG
Trigger: TCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACCGGATTGCTGCTTCTaGCTCCTGGGCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEPDCCF*LLGIGG
Trigger: ACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGGTCTCTGGTTTGGCTaGCCCCGGTGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRGLWFG*PRCGLW
Trigger: CCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGGTCTCTGGTTTGGCTaGCCCCGGTGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTGLWFG*PRCGLW
Trigger: CCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGTCTCTGGTTTGGCTaGCCCCGGTGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGLWFG*PRCGLW
Trigger: CCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTGGCACAGAGGCTCCTaGCCCAGGAGGGGCTTCGTC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRWHRGS*PRRGFV
Trigger: GACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATTGCTCTGCAGGACCTaGAGGTGGAAGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALLCRT*RWKAAG
Trigger: CCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCAGTTCAACGCCTGCTaGCAGCTCGCCGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFQFNAC*QLAERL
Trigger: CAGCCTTTCGGCGAGCTGGCAGCAGGCGTTGAACTG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGGGAAGCAGCATCGTaGTGTGATGACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGEAAS*CDDQEG
Trigger: CCCTTCCTGGTCATCACAGCACGATGCTGCTTCCCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACAGTTCATCCGCAAAGTGCCCTGTCTCCACGAAGTTaGACACATGGCCGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LHSVGSVQAVKTVHPQSALSPRS*THGRRR
Trigger: ACGACGACGGCCATGTGTCCAACTTCGTGGAGACAG...GGCACTTTGCGGATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAAAGCTCTGCACAGTGTTaGTTCGGTCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VTEHCRVHWSECWGSLRKSSAQC*FGPGSQ
Trigger: TTGACTGCCTGGACCGAACCAACACTGTGCAGAGCT...TTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGTAGCTCCCGAGAGCTaGGGCGAGTCGAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTVAPES*GESSSQ
Trigger: CTGGCTGCTCGACTCGCCCCAGCTCTCGGGAGCTAC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCAGAAGCTGGTGCTGTaGAACTGGAAGCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAQKLVL*NWKRMP
Trigger: CGGCATCCGCTTCCAGTTCCACAGCACCAGCTTCTG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACAGAAGCTGGTGCTGTaGAACTGGAAGCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEQKLVL*NWKRMP
Trigger: CGGCATCCGCTTCCAGTTCCACAGCACCAGCTTCTG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTTCCGCTCCTTCACCTaGGACTGCCCGGCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAFRSFT*DCPAVR
Trigger: CCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCAGCAAACAGGAGTTaGCAGTGGGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPANRS*QWETRG
Trigger: CCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLLGER*RNSPTA
Trigger: AGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCCCGGTGTGGGCTCTaGTTCAGAGGATGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPRCGL*FRGCFK
Trigger: CTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCGCCTGTGGGGTCTCTaGTTTGGCTGCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAARLWGL*FGCPRC
Trigger: ACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCGCCTGTGGGGTCTCTaGTTTGGCTGCCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTRLWGL*FGCPRC
Trigger: ACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGAGTGGGGGCGCCTGTaGGGTCTCTGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAEWGRL*GLWFGC
Trigger: GCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATCCTCGGGGGTACCTTaGGCACAAGAGGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSSGVP*AQEAAP
Trigger: AGGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATGCAGGACCTGCAGGTaGAAGGCTGCGGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKCRTCR*KAAGAD
Trigger: GTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAGGCCCTGGAGAAGCTaGCTGTTGCTCTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFRPWRS*LLLCRT
Trigger: GGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGTGGCAGCTCTGCCTTaGCAGCTGAAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAVAALP*QLKRQL
Trigger: CAGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCAC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCTGGGGAGCGTTGGGATaGACACAGGGATGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPFFRQKSGIHFWGIQSTWGALG*TQGCGE
Trigger: CTCCCCACATCCCTGTGTCCATCCCAACGCTCCCCA...GGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp ACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGACTAGCTTCCCACCTTTaGCAAATGTATCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TEHCRVHWSECWGSLRKRLASHL*QMYQGP
Trigger: CGGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAG...TCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp ACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGACGCAAAGTGCCTTTCTaGAAACGTGGACTGACGTTC +
Preference number: 4 (lower is better)
Translates to: TEHCRVHWSECWGSLRKRRKVPF*KRGLTF
Trigger: GAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCG...TCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTGCCCGGCCGTCAGGTaGCTACATATGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHCPAVR*LHMKQK
Trigger: CTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCCACATCGACTTCCTaGACTTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPTSTS*TSTSTI
Trigger: GATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGGTCTCTGCGGGGGTTaGGGTGGCCGAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCGLCGG*GGRGRL
Trigger: CAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGGAGATGGACGCATCTaGAGCCGACTTTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVGDGRI*SRLFHH
Trigger: ATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGCCTTGGGAGGTTGCTaGGGTGCTCCTGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFALGGC*GAPGRS
Trigger: ACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGCCCAGGTGGTAAGATaGGGCCAACCACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQAQVVR*GQPQAG
Trigger: CCCAGCTTGTGGTTGGCCTCATCTTACCACCTGGGC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp GTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCTCATCCCCCTGCTTCTaGGTGCGGACAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPFFRQKSGIHFWGIQSTSSPCF*VRTVRS
Trigger: TGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGA...GGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATGCCTCAAGGGCACGTaGAACAGCTGGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLECLKGT*NSWFQK
Trigger: CTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCAGCAGCTCACCTGGTaGTGCCTCAAGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTQQLTW*CLKGTC
Trigger: GCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGGCAGGCCTTGGCCTaGTTGTGGGAGGCATACACG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTARQALA*LWEAYT
Trigger: CGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHTCCPY*SFRSTM
Trigger: CATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATTCACGACCACCTGCTaGCCGTACTGCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEFTTTC*PYCSFR
Trigger: TCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVSKSSQ*SFNCGL
Trigger: GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCGCGATGAAGCTCTaGACAGTGTTGGTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSAMKL*TVLVRS
Trigger: GGACCGAACCAACACTGTGCAGAGCTTCATCGCGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAGCTTGATGGCCTCCTaGTTCACCCCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASLMAS*FTPSKK
Trigger: CTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCTTGATGGCCTCCTaGTTCACCCCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSLMAS*FTPSKK
Trigger: CTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAATATGTCAGCTGGGCTaGTGTCATCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLICQLG*CHPGSR
Trigger: CCGACTCCCAGGATGACAGCAGCCCAGCTGACATAT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCCTTGTTCCCCGCCTTaGCCCCCATGCCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTPCSPP*PPCPSS
Trigger: TGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCCTTGTTCCCCGCCTTaGCCCCCATGCCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAPCSPP*PPCPSS
Trigger: TGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGGAACTGGAAGCGGATaGCGACGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKGTGSG*RRRPCS
Trigger: GGAACAAGGGCGCCGTCGGCATCCGCTTCCAGTTCC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGAACTGGAAGCGGATaGCGACGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGTGSG*RRRPCS
Trigger: GGAACAAGGGCGCCGTCGGCATCCGCTTCCAGTTCC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGGAACTGGAAGCGGATaGCGACGGCGCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRGTGSG*RRRPCS
Trigger: GGAACAAGGGCGCCGTCGGCATCCGCTTCCAGTTCC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGACCGACAGAGACCTaGTCGGAGAACGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGPTET*SENGGG
Trigger: TCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGACCGACAGAGACCTaGTCGGAGAACGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGPTET*SENGGG
Trigger: TCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCGGATTGCTGCTTCTaGCTCCTGGGCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPDCCF*LLGIGG
Trigger: ACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAGACACCGGATTGCTaGTTCTGCCTCCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLETPDC*FCLLGI
Trigger: AATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACTCTGGTTCAGAGGATaGTTCAAGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLELWFRG*FKVPWG
Trigger: GCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTTGCTCTGCAGGACCTaGAGGTGGAAGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAALLCRT*RWKAAG
Trigger: CCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAALACL*EAYTVR
Trigger: CCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKFTPRV*KRVPVR
Trigger: GCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAACGAAGTTGGACACATaGCCGTCGTCGTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLETKLDT*PSSFTP
Trigger: TGGCGTGAACGACGACGGCCATGTGTCCAACTTCGT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACTGTCTCCACGAAGTTaGACACATGGCCGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLLSPRS*THGRRR
Trigger: ACGACGACGGCCATGTGTCCAACTTCGTGGAGACAG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp ACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAGCCTTTCTGAAAACGTaGACTGACGTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TEHCRVHWSECWGSLRKRAFLKT*TDVLPL
Trigger: AAGGGGGAGAACGTCAGTCCACGTTTTCAGAAAGGC...TCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGGATGGTTCGAGACATaGACCGGGCTCCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHGWFET*TGLHPS
Trigger: TGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGGGCTGCTGTCATCCTaGGAGTCGGTAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKGLLSS*ESVAPE
Trigger: CTCGGGAGCTACCGACTCCCAGGATGACAGCAGCCC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCTGGTGCTGTGGAACTaGAAGCGGATGCCGACGGCG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALVLWN*KRMPTA
Trigger: CGCCGTCGGCATCCGCTTCCAGTTCCACAGCACCAG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTGGTGCTGTGGAACTaGAAGCGGATGCCGACGGCG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLVLWN*KRMPTA
Trigger: CGCCGTCGGCATCCGCTTCCAGTTCCACAGCACCAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGGTTTACTACAACAGTaGCATCCAGGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEGLLQQ*HPGGPG
Trigger: TCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGAGGAGCCAGTGCTGTaGGGCCGGGGACATCAGAGA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAEEPVL*GRGHQR
Trigger: TCTCTGATGTCCCCGGCCCCACAGCACTGGCTCCTC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGAGGAGCCAGTGCTGTaGGGCCGGGGACATCAGAGA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKEEPVL*GRGHQR
Trigger: TCTCTGATGTCCCCGGCCCCACAGCACTGGCTCCTC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGGTGCCGGAGGAGATaGACGCATCTGAAGCCGACT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGCRRR*THLKPT
Trigger: AGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCGGAGGCACCTCCTCTaGCTTCCAGGAGACACCGGA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTRRHLL*LPGDTG
Trigger: TCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTGGCTGCCCCCGGTGTaGGCTCTGGTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAWLPPV*ALVQRM
Trigger: CATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAGGCCCTGGAGAAGCTaGCTGTTGCTCTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQRPWRS*LLLCRT
Trigger: GGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGAGAAAGTCCCCTTGTaGGAAGACGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTEKVPL*EDGARG
Trigger: GCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTGGCTTCATCGCTTTaGTGCCATCGCTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALASSL*CHRCRG
Trigger: GCCCCGACAGCGATGGCACCAAAGCGATGAAGCCAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAGTGGGGCTGCCTCTaGCTTCATCGCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFKWGCL*LHRFGA
Trigger: GGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTACTATGGGATCTCTTTTaGGGCTCCTGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVLWDLF*GSWFLS
Trigger: ACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAG...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGTGGCAGCTCTGCCTTaGCAGCTGAAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTVAALP*QLKRQL
Trigger: CAGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCAC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAACCCTGCTGCTGACCTaGGAATCCTACCAACTAGTA +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVTLLLT*ESYQLV
Trigger: TACTAGTTGGTAGGATTCCCAGGTCAGCAGCAGGGT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTACCCGTGGTGCTCTTaGCAGGCACAGGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAYPWCS*QAQALP
Trigger: GGGAAGGGCCTGTGCCTGCCAAGAGCACCACGGGTA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGGGGTGTACCCGTaGTGCTCTTGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTAGVYP*CSWQAQ
Trigger: CTGTGCCTGCCAAGAGCACCACGGGTACACCCCTGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR TCA 90 bp AATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAAACCTGTGGCTGCAGCCGTACGCGTCCGTaGGCTTGCCATACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: NSLLGNPKHQGQMKTCGCSRTRP*ACHTVL
Trigger: AAGGACAGTATGGCAAGCTCACGGACGCGTACGGCT...GCAGCCACAGGTTTTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCCATCGTTTGGCCATaGGAAATAGAACACCCCCGA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPIVWP*EIEHPR
Trigger: TCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLAERSL*SGQKMT
Trigger: TGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACGTTCTCCCCCTTTGTaGACACATCGAAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLERSPPL*THRSLP
Trigger: GGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGACCTCGAGCGCGATaGAGCTCTGCACAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGPRAR*SSAQCW
Trigger: CCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGTCAACGATGGGTTTTaGACTCAGCCCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEVNDGF*TQPQGL
Trigger: AAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGAC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAGACCACATGGCTTTaGAGGACTCCACAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLETTWL*RTPQSG
Trigger: ACCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACGTGAGATGGCTTTCTaGAGCTGTTCACCCCACATC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEREMAF*SCSPHI
Trigger: GATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTGCCCGGCCGTCAGGTaGCTACATATGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFCPAVR*LHMKQK
Trigger: CTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCCCCAAGGTCTGCATaGGCTCAGTACGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSPRSA*AQYAGP
Trigger: AGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCCACGTCCAGGACACTaGGAGCCGAGTGACTGTCTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAPRPGH*EPSDCL
Trigger: CAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGCCTTGGGAGGTTGCTaGGGTGCTCCTGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQALGGC*GAPGRS
Trigger: ACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCAAGGTTGGCTTCTTaGTGGCAGGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSRLAS*WQELWV
Trigger: CACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAAACTGTTCTTCCGGTaGCAGGGGCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAKLFFR*QGLSCP
Trigger: AGGACAGGAAAGCCCCTGTCACCGGAAGAACAGTTT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTAGGAGGGGCTTCGTCTaGTGCTGGCTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKARRGFV*CWLPVA
Trigger: AGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCT...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGGGGCTTGTAGCAGATaGAGTGCTGAGAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFGACSR*SAEKVP
Trigger: GGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGAAACACTGGCCTGGTaGTTCTTATATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVETLAW*FLYAGT
Trigger: TGTCCCTGCATATAAGAATCACCAGGCCAGTGTTTC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCACCAACGGCATCCTaGTCACCTAAACACCGCCTT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPPTAS*SPKHRL
Trigger: AAGGCGGTGTTTAGGTGATCAGGATGCCGTTGGTGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTPPASA*GQSGQS
Trigger: GCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAPPASA*GQSGQS
Trigger: GCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCATCCCCCTGCTTCTaGGTGCGGACAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSSPCF*VRTVRS
Trigger: TGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: GRNQEFTSGESKAPRPDEELSSP*FCVRTV
Trigger: GACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTC...TTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GTCAAGACAGTTCATCCGCAAAGTGCCTTTCTGAAAACGTGGACTGACGTTCTCAGGCAGGCCTTGGCCTaGTTGTGGGAGGCATACACG +
Preference number: 4 (lower is better)
Translates to: VKTVHPQSAFLKTWTDVLRQALA*LWEAYT
Trigger: CGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCT...GAGAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFTCCPY*SFRSTM
Trigger: CATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCCCCCTTTGTGAACACATCGAAGTCTTCCCAGTGCAGCTTTAACTGTGGCCTCAGCGCGATGAAGCTCTaGACAGTGTTGGTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SPFVNTSKSSQCSFNCGLSAMKL*TVLVRS
Trigger: GGACCGAACCAACACTGTGCAGAGCTTCATCGCGCT...GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCCCAGGGTCTTGAGCTaGAGATGCAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTPRVLS*RCRTSS
Trigger: GCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCATGCCCCCTTTGTCTaGCACCTCCTCGCCGTAGAC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRHAPFV*HLLAVD
Trigger: GTCTACGGCGAGGAGGTGGCAGACAAAGGGGGCATG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAACGTTGCTCCGGAACTaGTTTCCTCCGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLETLLRN*FPPFTF
Trigger: GAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGACGCCCACCAGCTGTaGCGAAGTCAACAGAATGTA +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAADAHQL*RSQQNV
Trigger: TACATTCTGTTGACTTCGGCACAGCTGGTGGGCGTC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGACGCCCACCAGCTGTaGCGAAGTCAACAGAATGTA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHDAHQL*RSQQNV
Trigger: TACATTCTGTTGACTTCGGCACAGCTGGTGGGCGTC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAATACTGTCCATGGGTaGCGGAGGAGATGGACGCAT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLNTVHG*RRRWTH
Trigger: ATGCGTCCATCTCCTCCGGCACCCATGGACAGTATT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCCGGATTGCTGCTTCTaGCTCCTGGGCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQPDCCF*LLGIGG
Trigger: ACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCAGGAGACACCGGATTaGTGCTTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAQETPD*CFCLLG
Trigger: GCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGTGGCTTGGCCTCTCTaGAGCTTTCCCAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFVAWPL*SFPRLK
Trigger: TTTCAGCCTGGGAAAGCTGCAGAGAGGCCAAGCCAC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGCTTCATCGCTTTGGTaGCATCGCTGTCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQASSLW*HRCRGL
Trigger: CAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAAGTGGGTCAAACACCTaGAGTGCTGTCCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVSGSNT*SAVLFS
Trigger: AGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGGTCAGTTCAACGCCTaGTGCCAGCTCGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTGQFNA*CQLAER
Trigger: CCTTTCGGCGAGCTGGCAGCAGGCGTTGAACTGACC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCATTCACACCCGGCTTaGCAAGCTGGCTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTHSHPA*QAGFPP
Trigger: GGGTGGGAAGCCAGCTTGGCAAGCCGGGTGTGAATG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGCACGTGCAACAGCTaGTTCCAGAAGAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGTCNS*FQKKEF
Trigger: GAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp TCCCCCTTTGTGAACACATCGAAGTCTTCCCAGTGCAGCTTTAACTGTGGCCTCACGAAGTTGGACACATaGCCGTCGTCGTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: SPFVNTSKSSQCSFNCGLTKLDT*PSSFTP
Trigger: TGGCGTGAACGACGACGGCCATGTGTCCAACTTCGT...GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCCAACCTGAAGCCCTaGCTGTTCCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTANLKP*LFPEQR
Trigger: CCGCTGTTCTGGGAACAGCCAGGGCTTCAGGTTGGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCTCTGCACAGTGTTaGTTCGGTCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSSAQC*FGPGSQ
Trigger: TTGACTGCCTGGACCGAACCAACACTGTGCAGAGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAACCTTGCTCAGGCTGTaGCCATTCAGAGACCACATG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLETLLRL*PFRDHM
Trigger: CATGTGGTCTCTGAATGGCCACAGCCTGAGCAAGGT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGAAGTTGGACTGGATaGTTCGAGACATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRSWTG*FETWTG
Trigger: CCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCCCGTCGAAGAAGTTaGACTGGATGGTTCGAGACA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPRRRS*TGWFET
Trigger: TGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCAGAAGCTGGTGCTGTaGAACTGGAAGCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQQKLVL*NWKRMP
Trigger: CGGCATCCGCTTCCAGTTCCACAGCACCAGCTTCTG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAAGGAGGACACTTCCTaGAAAACCCTCTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAKEDTS*KTLSRA
Trigger: TGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAAGGAGGACACTTCCTaGAAAACCCTCTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLKEDTS*KTLSRA
Trigger: TGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACCAGCAAACAGGAGTTaGCAGTGGGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKPANRS*QWETRG
Trigger: CCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGAGCAGGTGACTTGCTaGGAGGAGCCAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYREQVTC*EEPVLW
Trigger: CCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGGTGCCGGAGGAGATaGACGCATCTGAAGCCGACT +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGCRRR*THLKPT
Trigger: AGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCGCCTCCAGAGGTGGTaGCACAGAGGCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCRLQRW*HRGSCP
Trigger: GGGGCAGGAGCCTCTGTGCCACCACCTCTGGAGGCG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCTGGCTTCATCGCTTTaGTGCCATCGCTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLASSL*CHRCRG
Trigger: GCCCCGACAGCGATGGCACCAAAGCGATGAAGCCAG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCTGGCTTCATCGCTTTaGTGCCATCGCTGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAALASSL*CHRCRG
Trigger: GCCCCGACAGCGATGGCACCAAAGCGATGAAGCCAG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTAGCCGTACGCGTCCGTaGGCTTGCCATACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKASRTRP*ACHTVL
Trigger: AAGGACAGTATGGCAAGCTCACGGACGCGTACGGCT...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCCATCGTTTGGCCATaGGAAATAGAACACCCCCGA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPIVWP*EIEHPR
Trigger: TCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGATCTGGACAAAAGATaGCACTCCATCGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVDLDKR*HSIVHV
Trigger: TACATGGACGATGGAGTGTCATCTTTTGTCCAGATC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACGCAAAGTGCCTTTCTaGAAACGTGGACTGACGTTC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLERKVPF*KRGLTF
Trigger: GAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCGTGAGATGGCTTTCTaGAGCTGTTCACCCCACATC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFREMAF*SCSPHI
Trigger: GATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGCCCGGCCGTCAGGTaGCTACATATGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCPAVR*LHMKQK
Trigger: CTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATGTATCGTAGGCGGCTaGGCCAACGTCATACTTGTA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLCIVGG*ANVILV
Trigger: TACAAGTATGACGTTGGCTCAGCCGCCTACGATACA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGCCAGCACAGGTCTGTaGTCAGACGCTTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRASTGL*SDACSS
Trigger: GGAGCTACAAGCGTCTGATCACAGACCTGTGCTGGC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACCCACATCGACTTCCTaGACTTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAPTSTS*TSTSTI
Trigger: GATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTCCCCAAGGTCTGCATaGGCTCAGTACGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASPRSA*AQYAGP
Trigger: AGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAACACTGAGAGCCGAGTaGCTGTCTGCAAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLTLRAE*LSAKVT
Trigger: GGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVRLQAD*IHPPSS
Trigger: ACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCCGAGACTCCAGGCTaGTTGAATTCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSETPG*LNSSTK
Trigger: CTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGAGATGGACGCATCTaGAGCCGACTTTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGDGRI*SRLFHH
Trigger: ATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTGCCGTCTGCAAAATTaGATACTGTCCATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHCRLQN*ILSMGA
Trigger: GGCACCCATGGACAGTATTCAATTTTGCAGACGGCA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGCCTTGGGAGGTTGCTaGGGTGCTCCTGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAALGGC*GAPGRS
Trigger: ACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAAGGTTTTGTGTTCATaGTCTGGTGGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAKVLCS*SGGSSA
Trigger: GGCAGAGCTGCCACCAGATCATGAACACAAAACCTT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTCATCCCCCTGCTTCTaGGTGCGGACAGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASSPCF*VRTVRS
Trigger: TGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGGTTCGGTCCAGGCAGTCAAGACAGTTCATCCGCAAAGTGCCTTTCTGAAAACACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: WFGPGSQDSSSAKCLSENTCCPY*SFRSTM
Trigger: CATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGT...GTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGACTGCCTGGACCGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGGTTCACGACCACCTaGTGCCCGTACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTRFTTT*CPYCSF
Trigger: GAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAGGTTCACGACCACCTaGTGCCCGTACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKRFTTT*CPYCSF
Trigger: GAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSKSSQ*SFNCGL
Trigger: GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTCACCAGGAGCGCCGTaGTGTCCAGCAGCATGCCCC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSPGAP*CPAACP
Trigger: GGGGCATGCTGCTGGACAGCACGGCGCTCCTGGTGA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTGTCCAGGCGGGGGTaGGGCATTTGTCGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLSRRG*GICRLY
Trigger: ATACAAGCGACAAATGCCGCACCCCCGCCTGGACAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAATACTGTCCATGGGTaGCGGAGGAGATGGACGCAT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFNTVHG*RRRWTH
Trigger: ATGCGTCCATCTCCTCCGGCACCCATGGACAGTATT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGCTTCATCGCTTTGGTaGCATCGCTGTCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAASSLW*HRCRGL
Trigger: CAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTCATCGCTTTGGTaGCATCGCTGTCGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAASSLW*HRCRGL
Trigger: CAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAGTACCTAAACCAGTCTaGGTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVVPKPV*VNCTML
Trigger: TAACATGGTGCAGTTCACGCAGACTGGTTTAGGTAC...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGTCTTAGTCTCCAGGTaGTGCAGGGGTGTACCCGTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAVLVSR*CRGVPV
Trigger: CACGGGTACACCCCTGCAGCACCTGGAGACTAAGAC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp GCAGCTTTAACTGTGGCCTCAAGAGGGTCTCCAATTTCTCTAGCTTCCCACCTTCGAGTCACTGAGCACTaGCGTGTTCACTGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: AALTVASRGSPISLASHLRVTEH*RVHWSE
Trigger: TTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCG...AAGGTGGGAAGCTAGAGAAATTGGAGACCCTCTTGAGGCCACAGTTAAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGGCACGTGCAACAGCTaGTTCCAGAAGAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFGTCNS*FQKKEF
Trigger: GAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCTGTCTCCACGAAGTTaGACACATGGCCGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLSPRS*THGRRR
Trigger: ACGACGACGGCCATGTGTCCAACTTCGTGGAGACAG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGCCTTTCTGAAAACGTaGACTGACGTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHAFLKT*TDVLPL
Trigger: AAGGGGGAGAACGTCAGTCCACGTTTTCAGAAAGGC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACAAAGCGGTCAACGATaGGTTTTGAACTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEQSGQR*VLNSAP
Trigger: TGGGGCTGAGTTCAAAACCCATCGTTGACCGCTTTG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAAGCAAATATGTCAGCTaGGCTGCTGTCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLESKYVS*AAVILG
Trigger: TCCCAGGATGACAGCAGCCCAGCTGACATATTTGCT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATATGAGAGCGTGAGATaGCTTTCTGAAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVYESVR*LSEAVH
Trigger: GTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCAGAAGCTGGTGCTGTaGAACTGGAAGCGGATGCCG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTQKLVL*NWKRMP
Trigger: CGGCATCCGCTTCCAGTTCCACAGCACCAGCTTCTG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGGTTTACTACAACAGTaGCATCCAGGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAGLLQQ*HPGGPG
Trigger: TCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCCCCGGTGTGGGCTCTaGTTCAGAGGATGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAPRCGL*FRGCFK
Trigger: CTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCCCCGGTGTGGGCTCTaGTTCAGAGGATGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRPRCGL*FRGCFK
Trigger: CTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGGCAGGAACTCTGGGTaGGGGCCGACGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLGRNSG*GPTGKE
Trigger: CTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAAGTGGGGCTGCCTCTaGCTTCATCGCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKKWGCL*LHRFGA
Trigger: GGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAAGTGGGGCTGCCTCTaGCTTCATCGCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTKWGCL*LHRFGA
Trigger: GGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCTCTTTTGGGGCTCCTaGTTCCTGAGTCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLFWGS*FLSPKG
Trigger: ACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGTGTTCATGATCTGGTaGCAGCTCTGCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAVFMIW*QLCLGS
Trigger: GCTGCCAAGGCAGAGCTGCCACCAGATCATGAACAC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACCCATCGTTTGGCCATaGGAAATAGAACACCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAPIVWP*EIEHPR
Trigger: TCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQAERSL*SGQKMT
Trigger: TGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTCTCCAATTTCTCTAGCTTCCCACCTTTGGCAAATGTATCAGGGCCCGAGTCAGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: VSNFSSFPPLANVSGPESAERSL*SGQKMT
Trigger: TGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGC...TGACTCGGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAGAGAAATTGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAAERSL*SGQKMT
Trigger: TGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACGTTCTCCCCCTTTGTaGACACATCGAAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTARSPPL*THRSLP
Trigger: GGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGTATCTATGAGAGCGTaGGATGGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEVSMRA*DGFLKL
Trigger: CAGCTTCAGAAAGCCATCTCACGCTCTCATAGATAC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCAGGTGACTACATATaGAGCAGAAGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSGDYI*SRSWCC
Trigger: ACAGCACCAGCTTCTGCTTCATATGTAGTCACCTGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTGCCCGGCCGTCAGGTaGCTACATATGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRCPAVR*LHMKQK
Trigger: CTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGAGACCAGGTGTGTCTaGCTTTGGTGTCAACATCTA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHETRCV*LWCQHL
Trigger: TAGATGTTGACACCAAAGTCAGACACACCTGGTCTC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACCCACATCGACTTCCTaGACTTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKPTSTS*TSTSTI
Trigger: GATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHCLVSE*SPLANL
Trigger: AAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCAAGGTTGGCTTCTTaGTGGCAGGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSRLAS*WQELWV
Trigger: CACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACACTGCTATTGTAAGTaGGGCCCTGGAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKHCYCK*GPGEAG
Trigger: GCCAGCTTCTCCAGGGCCTCACTTACAATAGCAGTG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGGGCTTGTAGCAGATaGAGTGCTGAGAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGACSR*SAEKVP
Trigger: GGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGGGCTTGTAGCAGATaGAGTGCTGAGAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGACSR*SAEKVP
Trigger: GGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAGGTTTTGTGTTCATaGTCTGGTGGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFKVLCS*SGGSSA
Trigger: GGCAGAGCTGCCACCAGATCATGAACACAAAACCTT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp AATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAAACCTGTGGCTGCGGAAGCTCAGAGACGTaGCACCAGATTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NSLLGNPKHQGQMKTCGCGSSET*HQISAS
Trigger: TGAGGCTGAAATCTGGTGGCACGTCTCTGAGCTTCC...GCAGCCACAGGTTTTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATGCCTCAAGGGCACGTaGAACAGCTGGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKCLKGT*NSWFQK
Trigger: CTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTTCACGACCACCTGCTaGCCGTACTGCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTFTTTC*PYCSFR
Trigger: TCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGCGCGATGAAGCTCTaGACAGTGTTGGTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSAMKL*TVLVRS
Trigger: GGACCGAACCAACACTGTGCAGAGCTTCATCGCGCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTATATGTCAGCTGGGCTaGTGTCATCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTICQLG*CHPGSR
Trigger: CCGACTCCCAGGATGACAGCAGCCCAGCTGACATAT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAGCCGAGTGACTGTCTaGAAAAGTTACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASRVTV*KSYQHL
Trigger: CAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCCGAGTGACTGTCTaGAAAAGTTACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSRVTV*KSYQHL
Trigger: CAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAATACTGTCCATGGGTaGCGGAGGAGATGGACGCAT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQNTVHG*RRRWTH
Trigger: ATGCGTCCATCTCCTCCGGCACCCATGGACAGTATT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGAGACACCGGATTGCTaGTTCTGCCTCCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRETPDC*FCLLGI
Trigger: AATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGAGACACCGGATTGCTaGTTCTGCCTCCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKETPDC*FCLLGI
Trigger: AATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTCTGGTTCAGAGGATaGTTCAAGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLWFRG*FKVPWG
Trigger: GCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAGTGGGTCAAACACCTaGAGTGCTGTCCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASGSNT*SAVLFS
Trigger: AGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTCAGCGAGCGTCTCCTaGTCATTCCTGTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSASVS*SFLFIH
Trigger: GTGAATGAACAGGAATGAGCAGGAGACGCTCGCTGA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATGCCAGTCTTTGGGCTaGTACTGTCCTTACAAACTC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLECQSLG*YCPYKL
Trigger: GAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGATGTGTCTACAGATaGCAGTCTTTGGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRCVYR*QSLGCY
Trigger: GTAGCAGCCCAAAGACTGGCATCTGTAGACACATCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GGCACATTACTGCCCCCAAATATCCACAATACCAGAGAACCAAAGAGGATGTGGGACTTCCTTTTCTTCTaGAGCCAGCGTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: GTLLPPNIHNTREPKRMWDFLFF*SQRGHR
Trigger: ACGGTGGCCACGCTGGCTCCAGAAGAAAAGGAAGTC...CCACATCCTCTTTGGTTCTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTACGAAGTTGGACACATaGCCGTCGTCGTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAATKLDT*PSSFTP
Trigger: TGGCGTGAACGACGACGGCCATGTGTCCAACTTCGT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCTGTCTCCACGAAGTTaGACACATGGCCGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAALSPRS*THGRRR
Trigger: ACGACGACGGCCATGTGTCCAACTTCGTGGAGACAG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACACGGAGCCTCTGATCTaGACAAAAGATGACACTCCA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHTEPLI*TKDDTP
Trigger: TGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGCCTTTCTGAAAACGTaGACTGACGTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFAFLKT*TDVLPL
Trigger: AAGGGGGAGAACGTCAGTCCACGTTTTCAGAAAGGC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGACCTTGCTCAGGCTGTaGCCATTCAGAGACCACATG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQTLLRL*PFRDHM
Trigger: CATGTGGTCTCTGAATGGCCACAGCCTGAGCAAGGT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGATGGTTCGAGACATaGACCGGGCTCCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGWFET*TGLHPS
Trigger: TGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAGAAGTTGGACTGGATaGTTCGAGACATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQRSWTG*FETWTG
Trigger: CCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCGAAGAAGTTGGACTaGATGGTTCGAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSKKLD*MVRDMD
Trigger: GTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGGTTTACTACAACAGTaGCATCCAGGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRGLLQQ*HPGGPG
Trigger: TCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGTTTACTACAACAGTaGCATCCAGGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGLLQQ*HPGGPG
Trigger: TCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAACCAGCATCTGCCCTTaGTTGATCCTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLETSICP*LILTRT
Trigger: TGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCGGAGGCACCTCCTCTaGCTTCCAGGAGACACCGGA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCRRHLL*LPGDTG
Trigger: TCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGAGTGGGGGCGCCTGTaGGGTCTCTGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLEWGRL*GLWFGC
Trigger: GCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATGTCCTTCTCAAGGTTaGCTTCTTGATGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLECPSQG*LLDGRN
Trigger: GTTCCTGCCATCAAGAAGCCAACCTTGAGAAGGACA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATGCAGGACCTGCAGGTaGAAGGCTGCGGGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLCRTCR*KAAGAD
Trigger: GTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTCTTTTGGGGCTCCTaGTTCCTGAGTCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALFWGS*FLSPKG
Trigger: ACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCTATGGGATCTCTTTTaGGGCTCCTGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLWDLF*GSWFLS
Trigger: ACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCTGACACTGGGTCTATaGGATCTCTTTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLTLGL*DLFWGS
Trigger: GGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGTGGCAGCTCTGCCTTaGCAGCTGAAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCVAALP*QLKRQL
Trigger: CAGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCAC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGTGTTCATGATCTGGTaGCAGCTCTGCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAVFMIW*QLCLGS
Trigger: GCTGCCAAGGCAGAGCTGCCACCAGATCATGAACAC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GACACAGGGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCAGGAATTCACTTCTaGGGAATCCAAAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: DTGMWGGSPSSGRNQEFTSGIHF*GIQSTK
Trigger: CTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGA...AGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCCCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp GTGCATTTTGAAGTCTGGGCACATTACTGCCCCCAAATATCCACAATACCAGAGGAACCAAAGAGGATGTaGGGGTGGGGAGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VHFEVWAHYCPQISTIPEEPKRM*GWGALG
Trigger: TCCCAACGCTCCCCACCCCCACATCCTCTTTGGTTC...CTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGATCTGGACAAAAGATaGCACTCCATCGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLDLDKR*HSIVHV
Trigger: TACATGGACGATGGAGTGTCATCTTTTGTCCAGATC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGTCAACGATGGGTTTTaGACTCAGCCCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTVNDGF*TQPQGL
Trigger: AAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGAC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGAGACCACATGGCTTTaGAGGACTCCACAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTETTWL*RTPQSG
Trigger: ACCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTTTGTGAATTCGGACTaGCGCTCAGTCATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHFVNSD*RSVIAF
Trigger: GAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATCAGCTCCGCCGTCCTaGGCACGTTGCTCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLSAPPS*ARCSGT
Trigger: AGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAGCAGAGTTTCTGGGTaGTCTCCTTGTAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSRVSG*SPCSLH
Trigger: ATGAAGACTACAAGGAGATCACCCAGAAACTCTGCT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGTATCGTAGGCGGCTaGGCCAACGTCATACTTGTA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCIVGG*ANVILV
Trigger: TACAAGTATGACGTTGGCTCAGCCGCCTACGATACA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFCLVSE*SPLANL
Trigger: AAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRLQAD*IHPPSS
Trigger: ACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATCCGAGACTCCAGGCTaGTTGAATTCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASETPG*LNSSTK
Trigger: CTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGGTCTCTGCGGGGGTTaGGGTGGCCGAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEGLCGG*GGRGRL
Trigger: CAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGCCGTCTGCAAAATTaGATACTGTCCATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCRLQN*ILSMGA
Trigger: GGCACCCATGGACAGTATTCAATTTTGCAGACGGCA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATGCCGTCTGCAAAATTaGATACTGTCCATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTACRLQN*ILSMGA
Trigger: GGCACCCATGGACAGTATTCAATTTTGCAGACGGCA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTCAAGGTTGGCTTCTTaGTGGCAGGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSRLAS*WQELWV
Trigger: CACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATCAAGGTTGGCTTCTTaGTGGCAGGAACTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSRLAS*WQELWV
Trigger: CACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAAACTGTTCTTCCGGTaGCAGGGGCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTKLFFR*QGLSCP
Trigger: AGGACAGGAAAGCCCCTGTCACCGGAAGAACAGTTT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCAGCTTTCCCAGGCTaGAATGTTCTTGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAAAFPG*NVLGLG
Trigger: TCCCAAACCAAGAACATTTCAGCCTGGGAAAGCTGC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAGGAGGGGCTTCGTCTaGTGCTGGCTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCRRGFV*CWLPVA
Trigger: AGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCCGGACAGACGAGGCTaGAACACTCTCCATATTCTA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQPDRRG*NTLHIL
Trigger: TAGAATATGGAGAGTGTTTCAGCCTCGTCTGTCCGG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACAGTCACGTAAGGGATaGCACTTGATCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAQSRKG*HLITAV
Trigger: CACAGCAGTGATCAAGTGTCATCCCTTACGTGACTG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATTTCCCCTGCTTCTTTaGCTGGTTGTTACATTTATC +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVFPLLL*LVVTFI
Trigger: GATAAATGTAACAACCAGTCAAAGAAGCAGGGGAAA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCCGTTACTAGAACACTaGGATCAAACGGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHPLLEH*DQTEDP
Trigger: TGGATCTTCCGTTTGATCTCAGTGTTCTAGTAACGG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGAAGCTCAGAGACGTaGCACCAGATTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGSSET*HQISAS
Trigger: TGAGGCTGAAATCTGGTGGCACGTCTCTGAGCTTCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCELSSP*FCVRTV
Trigger: GACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACAGCAGCTCACCTGGTaGTGCCTCAAGGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLQQLTW*CLKGTC
Trigger: GCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAGGCAGGCCTTGGCCTaGTTGTGGGAGGCATACACG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCRQALA*LWEAYT
Trigger: CGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GCAGCTTTAACTGTGGCCTCAAGAGGGTCTCCAATTTCTCTAGCTTCCCACCTTTCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AALTVASRGSPISLASHLSKSSQ*SFNCGL
Trigger: GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGA...AAGGTGGGAAGCTAGAGAAATTGGAGACCCTCTTGAGGCCACAGTTAAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGTTCATCCGCAAAGTaGCTTTCTGAAAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSSSAK*LSENVD
Trigger: GTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCCCAGGGTCTTGAGCTaGAGATGCAGGACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCPRVLS*RCRTSS
Trigger: GCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGACGCCCACCAGCTGTaGCGAAGTCAACAGAATGTA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAADAHQL*RSQQNV
Trigger: TACATTCTGTTGACTTCGGCACAGCTGGTGGGCGTC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACCTTGTTCCCCGCCTTaGCCCCCATGCCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLPCSPP*PPCPSS
Trigger: TGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAAAGTTACCAGCATCTaGCCTTGGTTGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLKVTSI*PWLILT
Trigger: TGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAACCAAGAAGTGGGGCTaGCTCTGGCTTCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKTKKWG*LWLHRF
Trigger: AAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAGTGGGTCAAACACCTaGAGTGCTGTCCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSGSNT*SAVLFS
Trigger: AGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAAGTTTTCGCACTGTGTaGTTTTATGTGGTATGCATG +
Preference number: 4 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVSFRTV*FYVVCM
Trigger: CATGCATACCACATAAAAGCACACAGTGCGAAAACT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGATGACACTTGATCACTaGTGTGCGAGCCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQMTLDH*CASLCT
Trigger: CGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCAT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCCAAGGAACCCATCTTaGTCTCTCCCCCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAPRNPS*SLPQTL
Trigger: CAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGCTAACCTAGGACACTaGCAAGCTGCCCAAATAACA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFANLGH*QAAQIT
Trigger: TGTTATTTGGGCAGCTTGGCAGTGTCCTAGGTTAGC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGCACGTGCAACAGCTaGTTCCAGAAGAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGTCNS*FQKKEF
Trigger: GAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTAGCTTCCCACCTTTaGCAAACTGATGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLASHL*QTDGSQ
Trigger: TTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAGCTCTGCACAGTGTTaGTTCGGTCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSSAQC*FGPGSQ
Trigger: TTGACTGCCTGGACCGAACCAACACTGTGCAGAGCT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCAAAGCGGTCAACGATaGGTTTTGAACTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQQSGQR*VLNSAP
Trigger: TGGGGCTGAGTTCAAAACCCATCGTTGACCGCTTTG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGAAGTTGGACTGGATaGTTCGAGACATGGACCGGG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAARSWTG*FETWTG
Trigger: CCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCCCCGTCGAAGAAGTTaGACTGGATGGTTCGAGACA +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRPRRRS*TGWFET
Trigger: TGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTATGAGAGCGTGAGATaGCTTTCTGAAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHYESVR*LSEAVH
Trigger: GTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTAAGGAGGACACTTCCTaGAAAACCCTCTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAKEDTS*KTLSRA
Trigger: TGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTT...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAAGGAGGACACTTCCTaGAAAACCCTCTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKKEDTS*KTLSRA
Trigger: TGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAGTACGCAGGTCCTCTaGAAACTCGTTTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASTQVL*KLVFLF
Trigger: GAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGTACGCAGGTCCTCTaGAAACTCGTTTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSTQVL*KLVFLF
Trigger: GAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTGTCCTTCTCAAGGTTaGCTTCTTGATGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFCPSQG*LLDGRN
Trigger: GTTCCTGCCATCAAGAAGCCAACCTTGAGAAGGACA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACGGCGCCTCCAGAGGTaGTGGCACAGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIRRLQR*WHRGSC
Trigger: GCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCTCTTTTGGGGCTCCTaGTTCCTGAGTCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTLFWGS*FLSPKG
Trigger: ACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCTGACACTGGGTCTATaGGATCTCTTTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALTLGL*DLFWGS
Trigger: GGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCTGACACTGGGTCTATaGGATCTCTTTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAALTLGL*DLFWGS
Trigger: GGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCTTCACTGTGTCGATaGCTACGTCCCTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSSLCR*LRPFTC
Trigger: GCAGGTGAAGGGACGTAGCCATCGACACAGTGAAGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp TCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCACCAGATGAAAACCTGTaGCTGCCTCAGAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGRNQEFTSGESKAPRPPDENL*LPQKKE
Trigger: CTCCTTCTTCTGAGGCAGCCACAGGTTTTCATCTGG...TGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp TTTCTGAAAACGTGGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCTTCGTGGAGAGGACAGCCTaGCCTTACCTTGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLKTWTDVLPLCEHIEVFVERTA*PYLEGS
Trigger: AGAGCCTTCAAGGTAAGGCCAGGCTGTCCTCTCCAC...GAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCCACGTTTTCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp GTGCATTTTGAAGTCTGGGCACATTACTGCCCCCAAATATCCACAATACCAGAGCCCATCGTTTGGCCATaGGAAATAGAACACCCCCGA +
Preference number: 4 (lower is better)
Translates to: VHFEVWAHYCPQISTIPEPIVWP*EIEHPR
Trigger: TCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGG...CTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCGCAAAGTGCCTTTCTaGAAACGTGGACTGACGTTC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKARKVPF*KRGLTF
Trigger: GAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAACAGAATGTATCTATaGGAGCGTGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHNRMYL*EREMAF
Trigger: GAAAGCCATCTCACGCTCTCATAGATACATTCTGTT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAGCAGAGTTTCTGGGTaGTCTCCTTGTAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSRVSG*SPCSLH
Trigger: ATGAAGACTACAAGGAGATCACCCAGAAACTCTGCT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTGTCTAGAAGGTTaGGTTCTCCAGCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEHCLEG*VLQLFY
Trigger: ATAAAACAGCTGGAGAACTCAACCTTCTAGACAGTG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGAGACCAGGTGTGTCTaGCTTTGGTGTCAACATCTA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQETRCV*LWCQHL
Trigger: TAGATGTTGACACCAAAGTCAGACACACCTGGTCTC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSKVGD*RFTTTV
Trigger: CACTGTTGTAGTAAACCTTCAATCACCGACCTTAGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACACTGAGAGCCGAGTaGCTGTCTGCAAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRTLRAE*LSAKVT
Trigger: GGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGT...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTACACTGAGAGCCGAGTaGCTGTCTGCAAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAATLRAE*LSAKVT
Trigger: GGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAACACTGAGAGCCGAGTaGCTGTCTGCAAAAGTTACC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKTLRAE*LSAKVT
Trigger: GGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTACLVSE*SPLANL
Trigger: AAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCLVSE*SPLANL
Trigger: AAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCCGAGACTCCAGGCTaGTTGAATTCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSETPG*LNSSTK
Trigger: CTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGAGATGGACGCATCTaGAGCCGACTTTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGDGRI*SRLFHH
Trigger: ATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGGAGATGGACGCATCTaGAGCCGACTTTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRGDGRI*SRLFHH
Trigger: ATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCTTTCCCAGGCTaGAATGTTCTTGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTAAFPG*NVLGLG
Trigger: TCCCAAACCAAGAACATTTCAGCCTGGGAAAGCTGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAAGGTTTTGTGTTCATaGTCTGGTGGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAKVLCS*SGGSSA
Trigger: GGCAGAGCTGCCACCAGATCATGAACACAAAACCTT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCTGATTGTCACCCAGTaGCCTAAGGTTTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLIVTQ*PKVLCS
Trigger: TGAACACAAAACCTTAGGTCACTGGGTGACAATCAG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGAAACACTGGCCTGGTaGTTCTTATATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQETLAW*FLYAGT
Trigger: TGTCCCTGCATATAAGAATCACCAGGCCAGTGTTTC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTCAGAGAGACAATGGTaGGTTGTGAAGTACCTAAAC +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASERQW*VVKYLN
Trigger: GTTTAGGTACTTCACAACTCACCATTGTCTCTCTGA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACAGCTCACCTGGTGCTaGCTCAAGGGCACGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLQLTWC*LKGTCN
Trigger: GTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTCGAAGTCTTCCCAGTaGAGCTTTAACTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSKSSQ*SFNCGL
Trigger: GAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGTTACCAGCATCTaGCCTTGGTTGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFKVTSI*PWLILT
Trigger: TGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGCCGAGTGACTGTCTaGAAAAGTTACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASRVTV*KSYQHL
Trigger: CAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAGCCGAGTGACTGTCTaGAAAAGTTACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSRVTV*KSYQHL
Trigger: CAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTTGTACGTTGGATGCTaGTTCTTTTTGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLYVGC*FFLVRA
Trigger: TGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGTCAAACACCTGCAGTaGTGTCCTCTTTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQVKHLQ*CPLFLV
Trigger: GACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGAC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGTCAAACACCTGCAGTaGTGTCCTCTTTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAVKHLQ*CPLFLV
Trigger: GACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGAC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGCTCAGTCATGTTTTTaGCAGTGGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQAQSCF*QWVKHL
Trigger: CAGGTGTTTGACCCACTGGCAAAAACATGACTGAGC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCACGAGAGTGACAGATaGACAAACGTTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQHESDR*TNVLAS
Trigger: ACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCGAAAACACGGTATCTaGTCCAAATGGATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFRKHGI*SKWIPD
Trigger: GTCTGGAATCCATTTGGAGCAGATACCGTGTTTTCG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTATGACACTTGATCACTaGTGTGCGAGCCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAMTLDH*CASLCT
Trigger: CGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCAT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCCAGTCTGCGTGAACTaGACCATGTTAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAPVCVN*TMLENS
Trigger: GCTGTTCTCTAACATGGTGCAGTTCACGCAGACTGG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGCCCAGCCTTGATTCACGTGCATTTTGAAGTCTGGGCACATTACTGCCCCCAAGTCTGGGCACATTACTaGCCCCAAATATCCACAATA +
Preference number: 4 (lower is better)
Translates to: CPALIHVHFEVWAHYCPQVWAHY*PQISTI
Trigger: TATTGTGGATATTTGGGGGCAGTAATGTGCCCAGAC...TTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCACGTGAATCAAGGCTGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLVDFSI*NSAHRC
Trigger: ACATCTGTGGGCAGAATTCCAGATGCTGAAATCTAC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGGCGTGTCGCCCGCGTaGCAAGAAGCCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSGVSPA*QEAQSS
Trigger: GCTGCTCTGGGCTTCTTGCCACGCGGGCGACACGCC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCCTTTCTGAAAACGTaGACTGACGTTCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTAFLKT*TDVLPL
Trigger: AAGGGGGAGAACGTCAGTCCACGTTTTCAGAAAGGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACAAAGCGGTCAACGATaGGTTTTGAACTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKQSGQR*VLNSAP
Trigger: TGGGGCTGAGTTCAAAACCCATCGTTGACCGCTTTG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAGCAAATATGTCAGCTaGGCTGCTGTCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSKYVS*AAVILG
Trigger: TCCCAGGATGACAGCAGCCCAGCTGACATATTTGCT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCTGATGAACGGGACATaGTATGGACGTACAAAGATA +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAALMNGT*YGRTKI
Trigger: TATCTTTGTACGTCCATACCATGTCCCGTTCATCAG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTGATGAACGGGACATaGTATGGACGTACAAAGATA +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLMNGT*YGRTKI
Trigger: TATCTTTGTACGTCCATACCATGTCCCGTTCATCAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAACCAGCATCTGCCCTTaGTTGATCCTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTATSICP*LILTRT
Trigger: TGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGACCAGCATCTGCCCTTaGTTGATCCTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQTSICP*LILTRT
Trigger: TGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAAACAGGAGTTGGCAGTaGGAGACACGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLNRSWQ*ETRGPC
Trigger: GCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGTCCTTCTCAAGGTTaGCTTCTTGATGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCPSQG*LLDGRN
Trigger: GTTCCTGCCATCAAGAAGCCAACCTTGAGAAGGACA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGAAATGTTCTTGGTTTaGGAACAGGAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAEMFLV*EQEGLE
Trigger: CTCGAGTCCCTCCTGTTCCCAAACCAAGAACATTTC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTATGGGATCTCTTTTaGGGCTCCTGGTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLWDLF*GSWFLS
Trigger: ACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCTGTCCTCTTTTCTTaGTCACTGATTGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAAVLFS*SLIVTQ
Trigger: CTGGGTGACAATCAGTGACCAAGAAAAGAGGACAGC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATTGGTAACAAGACAGTaGCATAGCCCAGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALVTRQ*HSPGKM
Trigger: CATCTTGCCTGGGCTATGCCACTGTCTTGTTACCAA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCACAATAAGAAGCCCTaGATGGTAGCATCAAAGACG +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFHNKKP*MVASKT
Trigger: CGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATCGCCGAAAGGCTGGTaGAAATTCAAAAGCCATGGG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSPKGW*KFKSHG
Trigger: CCCATGGCTTTTGAATTTCCACCAGCCTTTCGGCGA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
3UTR CAA 72 bp GCATCTTGGCAAATCAGCTTCTCCAAGGAACCCATCTaGCTCTCTCCCCCAAACTCTGTTAAGGACCATTCT +
Preference number: 4 (lower is better)
Translates to: ASWQISFSKEPI*LSPPNSVKDHS
Trigger: AGAATGGTCCTTAACAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGATTTGCCAAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCCAATTTCTCTAGCTTCCCACCTTTGGCAAATGTATCAGGGCCCGAGTCACTGGATCTGGACAAAAGATaGCACTCCATCGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: SNFSSFPPLANVSGPESLDLDKR*HSIVHV
Trigger: TACATGGACGATGGAGTGTCATCTTTTGTCCAGATC...CAGTGACTCGGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAGAGAAATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGATCTGGACAAAAGATaGCACTCCATCGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQDLDKR*HSIVHV
Trigger: TACATGGACGATGGAGTGTCATCTTTTGTCCAGATC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTTTGTGAATTCGGACTaGCGCTCAGTCATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQFVNSD*RSVIAF
Trigger: GAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGTATCTATGAGAGCGTaGGATGGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAVSMRA*DGFLKL
Trigger: CAGCTTCAGAAAGCCATCTCACGCTCTCATAGATAC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTCAGGTGACTACATATaGAGCAGAAGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSGDYI*SRSWCC
Trigger: ACAGCACCAGCTTCTGCTTCATATGTAGTCACCTGA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTCAGGTGACTACATATaGAGCAGAAGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASGDYI*SRSWCC
Trigger: ACAGCACCAGCTTCTGCTTCATATGTAGTCACCTGA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGAGACCAGGTGTGTCTaGCTTTGGTGTCAACATCTA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAETRCV*LWCQHL
Trigger: TAGATGTTGACACCAAAGTCAGACACACCTGGTCTC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGAGACCAGGTGTGTCTaGCTTTGGTGTCAACATCTA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTETRCV*LWCQHL
Trigger: TAGATGTTGACACCAAAGTCAGACACACCTGGTCTC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACATAGTCCAAACTTGTaGAGTCAAAGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEHSPNL*SQSFPP
Trigger: TGGAGGAAAACTTTGACTTCACAAGTTTGGACTATG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAAGAATATCCCCTTCTaGCTCATAGTCCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAKNIPF*LIVQTC
Trigger: ACAAGTTTGGACTATGAGTCAGAAGGGGATATTCTT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAAGAATATCCCCTTCTaGCTCATAGTCCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHKNIPF*LIVQTC
Trigger: ACAAGTTTGGACTATGAGTCAGAAGGGGATATTCTT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTARLQAD*IHPPSS
Trigger: ACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSLPAPA*APPGPR
Trigger: ACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTGATTGTCACCCAGTaGCCTAAGGTTTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALIVTQ*PKVLCS
Trigger: TGAACACAAAACCTTAGGTCACTGGGTGACAATCAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCTTTTCTTGGTCACTaGTTGTCACCCAGTGACCTA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSFLGH*LSPSDL
Trigger: TAGGTCACTGGGTGACAATCAGTGACCAAGAAAAGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTTCACGACCACCTGCTaGCCGTACTGCTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCFTTTC*PYCSFR
Trigger: TCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAGCGCGATGAAGCTCTaGACAGTGTTGGTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSAMKL*TVLVRS
Trigger: GGACCGAACCAACACTGTGCAGAGCTTCATCGCGCT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCTTTGTACGTTGGATaGTGCTTCTTTTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSLYVG*CFFLVR
Trigger: TCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGAAGTCTTGCCGTCTaGAAAATTGAATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRSLAV*KIEYCP
Trigger: TGGACAGTATTCAATTTTGCAGACGGCAAGACTTCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGTGGCTTGGCCTCTCTaGAGCTTTCCCAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCVAWPL*SFPRLK
Trigger: TTTCAGCCTGGGAAAGCTGCAGAGAGGCCAAGCCAC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGCTCAGTCATGTTTTTaGCAGTGGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAAQSCF*QWVKHL
Trigger: CAGGTGTTTGACCCACTGGCAAAAACATGACTGAGC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCATGTTTTTaGCAGTGGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAAQSCF*QWVKHL
Trigger: CAGGTGTTTGACCCACTGGCAAAAACATGACTGAGC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGCAGCCTTCAAAGCTaGTCAGTCATGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCSLQS*SVMFLP
Trigger: TGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCACGAGAGTGACAGATaGACAAACGTTTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAHESDR*TNVLAS
Trigger: ACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTATAAAGCACGTAAATaGCACCAACGGCATCCTGAT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFYKARK*HQRHPD
Trigger: ATCAGGATGCCGTTGGTGGCATTTACGTGCTTTATA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGGACACTGCCAAGCTaGCCAAATAACACAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAARTLPS*PNNTSR
Trigger: TCTGCTTGTGTTATTTGGGCAGCTTGGCAGTGTCCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR GCA 90 bp GGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAATGAAAACCTGTGGCTaGCTCAGAAGAAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRNQEFTSGESKAPRPDEMKTCG*LRRRSS
Trigger: GGAACTCCTTCTTCTGAGGCAGCCACAGGTTTTCAT...TTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCACGAAGTTGGACACATaGCCGTCGTCGTTCACGCCA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCTKLDT*PSSFTP
Trigger: TGGCGTGAACGACGACGGCCATGTGTCCAACTTCGT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAACGGAGCCTCTGATCTaGACAAAAGATGACACTCCA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKTEPLI*TKDDTP
Trigger: TGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GTCAAGACAGTTCATCCGCAAAGTGCCTTTCTGAAAACGTGGACTGACGTTCTCACGGAGCCTCTGATCTaGACAAAAGATGACACTCCA +
Preference number: 4 (lower is better)
Translates to: VKTVHPQSAFLKTWTDVLTEPLI*TKDDTP
Trigger: TGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGT...GAGAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTAGCTTCCCACCTTTaGCAAACTGATGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALASHL*QTDGSQ
Trigger: TTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGAACGGGACATGGTATaGACGTACAAAGATATAAAG +
Preference number: 4 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHERDMV*TYKDIK
Trigger: CTTTATATCTTTGTACGTCCATACCATGTCCCGTTC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGTACGCAGGTCCTCTaGAAACTCGTTTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASTQVL*KLVFLF
Trigger: GAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGTCATCTTTGTACGTTaGATGCTGCTTCTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: EAASCCDDQEGITEGPLLVIFVR*MLLLFG
Trigger: ACCAAAAAGAAGCAGCATCCAACGTACAAAGATGAC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATATGGCTGCCCCCGGTGTaGGCTCTGGTTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIWLPPV*ALVQRM
Trigger: CATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCA...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGAGTGGGGGCGCCTGTaGGGTCTCTGGTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEEWGRL*GLWFGC
Trigger: GCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGTCCTCTTTTCTTaGTCACTGATTGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKAVLFS*SLIVTQ
Trigger: CTGGGTGACAATCAGTGACCAAGAAAAGAGGACAGC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCATGTTTTTGCCAGTaGGTCAAACACCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSCFCQ*VKHLQC
Trigger: GCACTGCAGGTGTTTGACCCACTGGCAAAAACATGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATCATGTTTTTGCCAGTaGGTCAAACACCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSCFCQ*VKHLQC
Trigger: GCACTGCAGGTGTTTGACCCACTGGCAAAAACATGA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATGGGTGAGAACTTCTTaGACCTCATTGGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAWVRTS*TSLARF
Trigger: GAATCTAGCCAATGAGGTCCAAGAAGTTCTCACCCA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCAATGTCTAAGACATaGCACAGGAGCCTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKAMSKT*HRSLQL
Trigger: TAGCTGAAGGCTCCTGTGCCATGTCTTAGACATTGC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTTGGTAACAAGACAGTaGCATAGCCCAGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALVTRQ*HSPGKM
Trigger: CATCTTGCCTGGGCTATGCCACTGTCTTGTTACCAA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGAAATTCAAAAGCCATaGGTAGGCCCAGGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTEIQKP*VGPGGK
Trigger: CTTACCACCTGGGCCTACCCATGGCTTTTGAATTTC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGCTCGCCGAAAGGCTaGTGGAAATTCAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASSPKG*WKFKSH
Trigger: ATGGCTTTTGAATTTCCACCAGCCTTTCGGCGAGCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CCA 90 bp GGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAGTGCATTTTGAAGTCTaGGCACATTACTGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRNQEFTSGESKAPRPDEVHFEV*AHYCPQ
Trigger: TTGGGGGCAGTAATGTGCCCAGACTTCAAAATGCAC...TTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAAAAAGTCAGTGGCAGTaGTTTTGTAGATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AASCCDDQEGITEGPLLEKSQWQ*FCRFQH
Trigger: ATGCTGAAATCTACAAAATCACTGCCACTGACTTTT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAGGGCTCTGCTGCCTGTaGACACCTTGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIGLCCL*TPCSGC
Trigger: ACAGCCTGAGCAAGGTGTTCACAGGCAGCAGAGCCC...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTCAGCTCCGCCGTCCTaGGCACGTTGCTCCGGAACT +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSAPPS*ARCSGT
Trigger: AGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGAGCAGAGTTTCTGGGTaGTCTCCTTGTAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSRVSG*SPCSLH
Trigger: ATGAAGACTACAAGGAGATCACCCAGAAACTCTGCT...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKRLQAD*IHPPSS
Trigger: ACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTGATTGTCACCCAGTaGCCTAAGGTTTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLIVTQ*PKVLCS
Trigger: TGAACACAAAACCTTAGGTCACTGGGTGACAATCAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCATCACGTACAACATaGACTGAACAGCCATTTAAA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPSRTT*TEQPFK
Trigger: TTTAAATGGCTGTTCAGTTCATGTTGTACGTGATGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACCACCAACGGCATCCTaGTCACCTAAACACCGCCTT +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLPPTAS*SPKHRL
Trigger: AAGGCGGTGTTTAGGTGATCAGGATGCCGTTGGTGG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIELSSP*FCVRTV
Trigger: GACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTC...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAAGCTTGATGGCCTCCTaGTTCACCCCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLSLMAS*FTPSKK
Trigger: CTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTTGTACGTTGGATGCTaGTTCTTTTTGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLYVGC*FFLVRA
Trigger: TGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTCTTTGTACGTTGGATaGTGCTTCTTTTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSLYVG*CFFLVR
Trigger: TCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACTCTGGTTCAGAGGATaGTTCAAGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLLWFRG*FKVPWG
Trigger: GCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAAATGGACAGTCTGTTaGTCAAACTGTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQKWTVC*SNCSSG
Trigger: ACCGGAAGAACAGTTTGAGCAACAGACTGTCCATTT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAAATGGACAGTCTGTTaGTCAAACTGTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAKWTVC*SNCSSG
Trigger: ACCGGAAGAACAGTTTGAGCAACAGACTGTCCATTT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATTGCTCTGCAGGACCTaGAGGTGGAAGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELLCRT*RWKAAG
Trigger: CCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCACCAAGAAGTGGGGCTaGCTCTGGCTTCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCTKKWG*LWLHRF
Trigger: AAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACGAAAACACGGTATCTaGTCCAAATGGATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKRKHGI*SKWIPD
Trigger: GTCTGGAATCCATTTGGAGCAGATACCGTGTTTTCG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATATAAAGCACGTAAATaGCACCAACGGCATCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAYKARK*HQRHPD
Trigger: ATCAGGATGCCGTTGGTGGCATTTACGTGCTTTATA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTATCTATTTCCAGCACTaGAAGCAACTTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAIYFQH*KQLWRS
Trigger: GCTCCTCCAAAGTTGCTTGCAGTGCTGGAAATAGAT...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACCCCAAGATGGCAGCTaGTCATTGTCAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAPQDGS*SLSRLF
Trigger: AAATAATCTTGACAATGAGCAGCTGCCATCTTGGGG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGTACCTAAACCAGTCTaGGTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRVPKPV*VNCTML
Trigger: TAACATGGTGCAGTTCACGCAGACTGGTTTAGGTAC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSALACL*EAYTVR
Trigger: CCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGGGCTGCTGTCATCCTaGGAGTCGGTAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKGLLSS*ESVAPE
Trigger: CTCGGGAGCTACCGACTCCCAGGATGACAGCAGCCC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACTGGTGCTGTGGAACTaGAAGCGGATGCCGACGGCG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELVLWN*KRMPTA
Trigger: CGCCGTCGGCATCCGCTTCCAGTTCCACAGCACCAG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGTACGCAGGTCCTCTaGAAACTCGTTTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSTQVL*KLVFLF
Trigger: GAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGAGGAGCCAGTGCTGTaGGGCCGGGGACATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEEEPVL*GRGHQR
Trigger: TCTCTGATGTCCCCGGCCCCACAGCACTGGCTCCTC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGTCATCTTTGTACGTTaGATGCTGCTTCTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFVIFVR*MLLLFG
Trigger: ACCAAAAAGAAGCAGCATCCAACGTACAAAGATGAC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTGGGTGAGAACTTCTTaGACCTCATTGGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAWVRTS*TSLARF
Trigger: GAATCTAGCCAATGAGGTCCAAGAAGTTCTCACCCA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCACAATAAGAAGCCCTaGATGGTAGCATCAAAGACG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTHNKKP*MVASKT
Trigger: CGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAAGCAATCTCAGCCTCCTaGGTTCAAACGATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AEIRNSLLGNPKHQGQMKAISAS*VQTILL
Trigger: CAGAAGAATCGTTTGAACCCAGGAGGCTGAGATTGC...TTTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGGACCTCGAGCGCGATaGAGCTCTGCACAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSGPRAR*SSAQCW
Trigger: CCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAACAGAATGTATCTATaGGAGCGTGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAANRMYL*EREMAF
Trigger: GAAAGCCATCTCACGCTCTCATAGATACATTCTGTT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCACTGTCTAGAAGGTTaGGTTCTCCAGCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAHCLEG*VLQLFY
Trigger: ATAAAACAGCTGGAGAACTCAACCTTCTAGACAGTG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTG +
Preference number: 4 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSKVGD*RFTTTV
Trigger: CACTGTTGTAGTAAACCTTCAATCACCGACCTTAGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACATAGTCCAAACTTGTaGAGTCAAAGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAHSPNL*SQSFPP
Trigger: TGGAGGAAAACTTTGACTTCACAAGTTTGGACTATG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGAGGAGGGGCTTCGTCTaGTGCTGGCTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKRRGFV*CWLPVA
Trigger: AGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAAGGTTCCCATTCCTTaGAGAGCAAACTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTKVPIP*RANFRC
Trigger: ACATCTGAAGTTTGCTCTTCAAGGAATGGGAACCTT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCCGGACAGACGAGGCTaGAACACTCTCCATATTCTA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCPDRRG*NTLHIL
Trigger: TAGAATATGGAGAGTGTTTCAGCCTCGTCTGTCCGG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGTCTTTTTCAGTTATTaGATAGGTGAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFVFFSY*IGEKCC
Trigger: ACAGCACTTCTCACCTATTCAATAACTGAAAAAGAC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCAGTCACGTAAGGGATaGCACTTGATCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCQSRKG*HLITAV
Trigger: CACAGCAGTGATCAAGTGTCATCCCTTACGTGACTG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAAGAGAATTCTGGTATaGGAACCATACCTACTACCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQKRILV*EPYLLP
Trigger: TGGTAGTAGGTATGGTTCTCATACCAGAATTCTCTT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAATAGGCAAGAAGTCTaGGAAGATGGTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFNRQEV*EDGDVK
Trigger: TTTTACATCACCATCTTCTCAGACTTCTTGCCTATT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCAGCTCACCTGGTGCTaGCTCAAGGGCACGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKQLTWC*LKGTCN
Trigger: GTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTTCTGAAAACGTGGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCTTCAGTTCATCCGCAAAGTaGCTTTCTGAAAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: FLKTWTDVLPLCEHIEVFSSSAK*LSENVD
Trigger: GTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACT...GAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCCACGTTTTCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAACGTTGCTCCGGAACTaGTTTCCTCCGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLTLLRN*FPPFTF
Trigger: GAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTTGTACGTTGGATGCTaGTTCTTTTTGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALYVGC*FFLVRA
Trigger: TGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAGAAGTCTTGCCGTCTaGAAAATTGAATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQRSLAV*KIEYCP
Trigger: TGGACAGTATTCAATTTTGCAGACGGCAAGACTTCT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCAGGAGACACCGGATTaGTGCTTCTGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKQETPD*CFCLLG
Trigger: GCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCCCCAAGATGGCAGCTaGTCATTGTCAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTPQDGS*SLSRLF
Trigger: AAATAATCTTGACAATGAGCAGCTGCCATCTTGGGG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGCCAACCTGAAGCCCTaGCTGTTCCCAGAACAGCGG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSANLKP*LFPEQR
Trigger: CCGCTGTTCTGGGAACAGCCAGGGCTTCAGGTTGGC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAACCTTGCTCAGGCTGTaGCCATTCAGAGACCACATG +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLTLLRL*PFRDHM
Trigger: CATGTGGTCTCTGAATGGCCACAGCCTGAGCAAGGT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGAACGGGACATGGTATaGACGTACAAAGATATAAAG +
Preference number: 4 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAERDMV*TYKDIK
Trigger: CTTTATATCTTTGTACGTCCATACCATGTCCCGTTC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAACAGGAGTTGGCAGTaGGAGACACGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGENRSWQ*ETRGPC
Trigger: GCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCCAGCAAACAGGAGTTaGCAGTGGGAGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSPANRS*QWETRG
Trigger: CCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGAGCAGGTGACTTGCTaGGAGGAGCCAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKEQVTC*EEPVLW
Trigger: CCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGGCCCTGGAGAAGCTaGCTGTTGCTCTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGERPWRS*LLLCRT
Trigger: GGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGTAACCTTGTTTAAGTaGGCCAGGACAGCTACTAAT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTVTLFK*ARTATN
Trigger: ATTAGTAGCTGTCCTGGCCCACTTAAACAAGGTTAC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTTCAGTAGCACACCATaGCTCAGGATTATAGTAATT +
Preference number: 4 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFFSSTP*LRIIVI
Trigger: AATTACTATAATCCTGAGCCATGGTGTGCTACTGAA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTCAAACCCAGAAACACTaGCCTGGTGATTCTTATATG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTQTQKH*PGDSYM
Trigger: CATATAAGAATCACCAGGCCAGTGTTTCTGGGTTTG...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACAAACCCAGAAACACTaGCCTGGTGATTCTTATATG +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKQTQKH*PGDSYM
Trigger: CATATAAGAATCACCAGGCCAGTGTTTCTGGGTTTG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGAGCCGTACGCGTCCGTaGGCTTGCCATACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSRTRP*ACHTVL
Trigger: AAGGACAGTATGGCAAGCTCACGGACGCGTACGGCT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGAAAAGTCAGTGGCAGTaGTTTTGTAGATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQKSQWQ*FCRFQH
Trigger: ATGCTGAAATCTACAAAATCACTGCCACTGACTTTT...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACCCACATCGACTTCCTaGACTTCCACCTCCACGATC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIPTSTS*TSTSTI
Trigger: GATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCATAGTCCAAACTTGTaGAGTCAAAGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAHSPNL*SQSFPP
Trigger: TGGAGGAAAACTTTGACTTCACAAGTTTGGACTATG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCATAGTCCAAACTTGTaGAGTCAAAGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAHSPNL*SQSFPP
Trigger: TGGAGGAAAACTTTGACTTCACAAGTTTGGACTATG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATGCCGTCTGCAAAATTaGATACTGTCCATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLCRLQN*ILSMGA
Trigger: GGCACCCATGGACAGTATTCAATTTTGCAGACGGCA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGCAGCTTTCCCAGGCTaGAATGTTCTTGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLAAFPG*NVLGLG
Trigger: TCCCAAACCAAGAACATTTCAGCCTGGGAAAGCTGC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTGTACAAGCCTTGAGTaGAATATATTTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAACTSLE*NIFWWL
Trigger: CAGCCACCAAAATATATTTCACTCAAGGCTTGTACA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTTTCCCCTGCTTCTTTaGCTGGTTGTTACATTTATC +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAFPLLL*LVVTFI
Trigger: GATAAATGTAACAACCAGTCAAAGAAGCAGGGGAAA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAAGAGAATTCTGGTATaGGAACCATACCTACTACCA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTKRILV*EPYLLP
Trigger: TGGTAGTAGGTATGGTTCTCATACCAGAATTCTCTT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGTCTTGAGCTGCAGATaGAGGACCTCGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEVLSCR*RTSSAM
Trigger: CATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGAC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGTCTTGAGCTGCAGATaGAGGACCTCGAGCGCGATG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKVLSCR*RTSSAM
Trigger: CATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGAC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAATATGTCAGCTGGGCTaGTGTCATCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIICQLG*CHPGSR
Trigger: CCGACTCCCAGGATGACAGCAGCCCAGCTGACATAT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACTGTCCAGGCGGGGGTaGGGCATTTGTCGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELSRRG*GICRLY
Trigger: ATACAAGCGACAAATGCCGCACCCCCGCCTGGACAG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTCTTTGTACGTTGGATaGTGCTTCTTTTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSLYVG*CFFLVR
Trigger: TCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGAAGTCTTGCCGTCTaGAAAATTGAATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAARSLAV*KIEYCP
Trigger: TGGACAGTATTCAATTTTGCAGACGGCAAGACTTCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCCGGATTGCTGCTTCTaGCTCCTGGGCATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKPDCCF*LLGIGG
Trigger: ACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACTCTGGTTCAGAGGATaGTTCAAGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVILWFRG*FKVPWG
Trigger: GCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAGTGGCTTGGCCTCTCTaGAGCTTTCCCAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIVAWPL*SFPRLK
Trigger: TTTCAGCCTGGGAAAGCTGCAGAGAGGCCAAGCCAC...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGTCAAACACCTGCAGTaGTGTCCTCTTTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCVKHLQ*CPLFLV
Trigger: GACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGAC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGTTTTCGCACTGTGTaGTTTTATGTGGTATGCATG +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSFRTV*FYVVCM
Trigger: CATGCATACCACATAAAAGCACACAGTGCGAAAACT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAGACTTCCTTTTCTTCTaGAGCCAGCGTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIDFLFF*SQRGHR
Trigger: ACGGTGGCCACGCTGGCTCCAGAAGAAAAGGAAGTC...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355585.9
CDS-3UTR CCA 90 bp GCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATGAAAGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: AEIRNSLLGNPKHQGQMKVDFSI*NSAHRC
Trigger: ACATCTGTGGGCAGAATTCCAGATGCTGAAATCTAC...TTTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAGGATGGTTCGAGACATaGACCGGGCTCCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIGWFET*TGLHPS
Trigger: TGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCC...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTCGAAGAAGTTGGACTaGATGGTTCGAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSKKLD*MVRDMD
Trigger: GTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGTCATCTTTGTACGTTaGATGCTGCTTCTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTVIFVR*MLLLFG
Trigger: ACCAAAAAGAAGCAGCATCCAACGTACAAAGATGAC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGAAATGTTCTTGGTTTaGGAACAGGAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCEMFLV*EQEGLE
Trigger: CTCGAGTCCCTCCTGTTCCCAAACCAAGAACATTTC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGTGCTGTTGGAAACGTaGGAAAAATGTATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKVLLET*EKCIGK
Trigger: TTTGCCTATACATTTTTCCCACGTTTCCAACAGCAC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCTGTCCCATTTATTTaGTATCTGGAACGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSVPFI*YLERRE
Trigger: TTCTCTTCGTTCCAGATACCAAATAAATGGGACAGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp GGCACATTACTGCCCCCAAATATCCACAATACCAGAGAACCAAAGAGGATGTGGAAAAGTCAGTGGCAGTaGTTTTGTAGATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTLLPPNIHNTREPKRMWKSQWQ*FCRFQH
Trigger: ATGCTGAAATCTACAAAATCACTGCCACTGACTTTT...CCACATCCTCTTTGGTTCTCTGGTATTGTGGATATTTGGGGGCAGTAATGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAAAAGTCAGTGGCAGTaGTTTTGTAGATTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAKSQWQ*FCRFQH
Trigger: ATGCTGAAATCTACAAAATCACTGCCACTGACTTTT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACGTGAGATGGCTTTCTaGAGCTGTTCACCCCACATC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIREMAF*SCSPHI
Trigger: GATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCACTGCTATTGTAAGTaGGGCCCTGGAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSHCYCK*GPGEAG
Trigger: GCCAGCTTCTCCAGGGCCTCACTTACAATAGCAGTG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTCTTTTCTTGGTCACTaGTTGTCACCCAGTGACCTA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSFLGH*LSPSDL
Trigger: TAGGTCACTGGGTGACAATCAGTGACCAAGAAAAGA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAATCAACCCTGCTGCTaGCCTGGGAATCCTACCAAC +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVINQPCC*PGNPTN
Trigger: GTTGGTAGGATTCCCAGGTCAGCAGCAGGGTTGATT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAATAGGCAAGAAGTCTaGGAAGATGGTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAANRQEV*EDGDVK
Trigger: TTTTACATCACCATCTTCTCAGACTTCTTGCCTATT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTGCCTCAAGGGCACGTaGAACAGCTGGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKCLKGT*NSWFQK
Trigger: CTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKTCCPY*SFRSTM
Trigger: CATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAAAGTTACCAGCATCTaGCCTTGGTTGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCKVTSI*PWLILT
Trigger: TGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAATACTGTCCATGGGTaGCGGAGGAGATGGACGCAT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVINTVHG*RRRWTH
Trigger: ATGCGTCCATCTCCTCCGGCACCCATGGACAGTATT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAACCAAGAAGTGGGGCTaGCTCTGGCTTCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVITKKWG*LWLHRF
Trigger: AAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGAAATGTTCTTGGTTTaGGAACAGGAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLEMFLV*EQEGLE
Trigger: CTCGAGTCCCTCCTGTTCCCAAACCAAGAACATTTC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTTCAGTAGCACACCATaGCTCAGGATTATAGTAATT +
Preference number: 4 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAFSSTP*LRIIVI
Trigger: AATTACTATAATCCTGAGCCATGGTGTGCTACTGAA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTCTGTCCCATTTATTTaGTATCTGGAACGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKASVPFI*YLERRE
Trigger: TTCTCTTCGTTCCAGATACCAAATAAATGGGACAGA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCTTTTCTTCTGGAGCTaGGGAAGAAACACATCACAG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCLFFWS*GRNTSQ
Trigger: CTGTGATGTGTTTCTTCCCCAGCTCCAGAAGAAAAG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638626.1
3UTR CAA 72 bp TGTAAACTACACGAGAGTGACAGATGCACAAACGTTTaGGCCAGTGTGCCTTTAAATAGATGTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CKLHESDRCTNV*ASVPLNRCLFW
Trigger: CCAGAAGAGACATCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTGTAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCGAGACCACATGGCTTTaGAGGACTCCACAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSETTWL*RTPQSG
Trigger: ACCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTC...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTG +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSKVGD*RFTTTV
Trigger: CACTGTTGTAGTAAACCTTCAATCACCGACCTTAGA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCAAACTGTTCTTCCGGTaGCAGGGGCTTTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSKLFFR*QGLSCP
Trigger: AGGACAGGAAAGCCCCTGTCACCGGAAGAACAGTTT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAACGTTGCTCCGGAACTaGTTTCCTCCGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGETLLRN*FPPFTF
Trigger: GAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCCAAGGAACCCATCTTaGTCTCTCCCCCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSPRNPS*SLPQTL
Trigger: CAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCVDFSI*NSAHRC
Trigger: ACATCTGTGGGCAGAATTCCAGATGCTGAAATCTAC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACTAGCTTCCCACCTTTaGCAAACTGATGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLLASHL*QTDGSQ
Trigger: TTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGCTCTGCACAGTGTTaGTTCGGTCCAGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESSAQC*FGPGSQ
Trigger: TTGACTGCCTGGACCGAACCAACACTGTGCAGAGCT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCCCCGTCGAAGAAGTTaGACTGGATGGTTCGAGACA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKPRRRS*TGWFET
Trigger: TGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCGCAAAGTGCCTTTCTaGAAACGTGGACTGACGTTC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSRKVPF*KRGLTF
Trigger: GAACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTGTATCGTAGGCGGCTaGGCCAACGTCATACTTGTA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKCIVGG*ANVILV
Trigger: TACAAGTATGACGTTGGCTCAGCCGCCTACGATACA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTGTATCGTAGGCGGCTaGGCCAACGTCATACTTGTA +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSCIVGG*ANVILV
Trigger: TACAAGTATGACGTTGGCTCAGCCGCCTACGATACA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCAAGAATATCCCCTTCTaGCTCATAGTCCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCKNIPF*LIVQTC
Trigger: ACAAGTTTGGACTATGAGTCAGAAGGGGATATTCTT...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATCCGAGACTCCAGGCTaGTTGAATTCATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESETPG*LNSSTK
Trigger: CTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCCAGTCTGCGTGAACTaGACCATGTTAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKPVCVN*TMLENS
Trigger: GCTGTTCTCTAACATGGTGCAGTTCACGCAGACTGG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLVDFSI*NSAHRC
Trigger: ACATCTGTGGGCAGAATTCCAGATGCTGAAATCTAC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAACGGAGCCTCTGATCTaGACAAAAGATGACACTCCA +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVITEPLI*TKDDTP
Trigger: TGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGTATCTATGAGAGCGTaGGATGGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEVSMRA*DGFLKL
Trigger: CAGCTTCAGAAAGCCATCTCACGCTCTCATAGATAC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAAAGTTACCAGCATCTaGCCTTGGTTGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIKVTSI*PWLILT
Trigger: TGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATCTTTGTACGTTGGATaGTGCTTCTTTTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLSLYVG*CFFLVR
Trigger: TCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTCGAAGAAGTTGGACTaGATGGTTCGAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSKKLD*MVRDMD
Trigger: GTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGACCAGCATCTGCCCTTaGTTGATCCTGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKTSICP*LILTRT
Trigger: TGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGTCATCTTTGTACGTTaGATGCTGCTTCTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLVIFVR*MLLLFG
Trigger: ACCAAAAAGAAGCAGCATCCAACGTACAAAGATGAC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGCTGTCCTCTTTTCTTaGTCACTGATTGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKAVLFS*SLIVTQ
Trigger: CTGGGTGACAATCAGTGACCAAGAAAAGAGGACAGC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATCATGTTTTTGCCAGTaGGTCAAACACCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESCFCQ*VKHLQC
Trigger: GCACTGCAGGTGTTTGACCCACTGGCAAAAACATGA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGCAATGTCTAAGACATaGCACAGGAGCCTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKAMSKT*HRSLQL
Trigger: TAGCTGAAGGCTCCTGTGCCATGTCTTAGACATTGC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCCCCTGCTTCTTTGACTaGTTGTTACATTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: SISRISKSFRTVCFYVVCPCFFD*LLHLSV
Trigger: AACAGATAAATGTAACAACCAGTCAAAGAAGCAGGG...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTTTGTGAATTCGGACTaGCGCTCAGTCATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSFVNSD*RSVIAF
Trigger: GAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGCAGAGTTTCTGGGTaGTCTCCTTGTAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESRVSG*SPCSLH
Trigger: ATGAAGACTACAAGGAGATCACCCAGAAACTCTGCT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACACTGTCTAGAAGGTTaGGTTCTCCAGCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIHCLEG*VLQLFY
Trigger: ATAAAACAGCTGGAGAACTCAACCTTCTAGACAGTG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTCTTTTCTTGGTCACTaGTTGTCACCCAGTGACCTA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSFLGH*LSPSDL
Trigger: TAGGTCACTGGGTGACAATCAGTGACCAAGAAAAGA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAAGGTTCCCATTCCTTaGAGAGCAAACTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIKVPIP*RANFRC
Trigger: ACATCTGAAGTTTGCTCTTCAAGGAATGGGAACCTT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGTTCATCCGCAAAGTaGCTTTCTGAAAACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESSSAK*LSENVD
Trigger: GTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATGCAGCCTTCAAAGCTaGTCAGTCATGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGECSLQS*SVMFLP
Trigger: TGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTGCAGCCTTCAAAGCTaGTCAGTCATGTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKCSLQS*SVMFLP
Trigger: TGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTATGAGAGCGTGAGATaGCTTTCTGAAGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSYESVR*LSEAVH
Trigger: GTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACCCTGCTTCTTTGACTaGTTGTTACATTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLPCFFD*LLHLSV
Trigger: AACAGATAAATGTAACAACCAGTCAAAGAAGCAGGG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAACAGAATGTATCTATaGGAGCGTGAGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGENRMYL*EREMAF
Trigger: GAAAGCCATCTCACGCTCTCATAGATACATTCTGTT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCACTGTCTAGAAGGTTaGGTTCTCCAGCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSHCLEG*VLQLFY
Trigger: ATAAAACAGCTGGAGAACTCAACCTTCTAGACAGTG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTG +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSSKVGD*RFTTTV
Trigger: CACTGTTGTAGTAAACCTTCAATCACCGACCTTAGA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATATGTACAAGCCTTGAGTaGAATATATTTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVICTSLE*NIFWWL
Trigger: CAGCCACCAAAATATATTTCACTCAAGGCTTGTACA...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCAGTTATTGAATAGGTaGGAAGTGCTGTTGGAAACG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKQLLNR*EVLLET
Trigger: CGTTTCCAACAGCACTTCTCACCTATTCAATAACTG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACAGTTATTGAATAGGTaGGAAGTGCTGTTGGAAACG +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEQLLNR*EVLLET
Trigger: CGTTTCCAACAGCACTTCTCACCTATTCAATAACTG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCAAACACCGCCTTTTATaGCTGGTCAACTATGCATCT +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSKHRLL*LVNYAS
Trigger: AGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATTGTACGTTGGATGCTaGTTCTTTTTGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELYVGC*FFLVRA
Trigger: TGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR GCA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAGAAGTCTTGCCGTCTaGAAAATTGAATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLILTLYINLQVAPQNVIRSLAV*KIEYCP
Trigger: TGGACAGTATTCAATTTTGCAGACGGCAAGACTTCT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACTGATGAACGGGACATaGTATGGACGTACAAAGATA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELMNGT*YGRTKI
Trigger: TATCTTTGTACGTCCATACCATGTCCCGTTCATCAG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCACATCAACCTTCAGGTaGCTCCCCAAAATGTTATAC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSTSTFR*LPKMLY
Trigger: GTATAACATTTTGGGGAGCCACCTGAAGGTTGATGT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGTAACCTTGTTTAAGTaGGCCAGGACAGCTACTAAT +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEVTLFK*ARTATN
Trigger: ATTAGTAGCTGTCCTGGCCCACTTAAACAAGGTTAC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGAACGGGACATGGTATaGACGTACAAAGATATAAAG +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKERDMV*TYKDIK
Trigger: CTTTATATCTTTGTACGTCCATACCATGTCCCGTTC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGTGCTGTTGGAAACGTaGGAAAAATGTATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEVLLET*EKCIGK
Trigger: TTTGCCTATACATTTTTCCCACGTTTCCAACAGCAC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCACCGCCTTTTATGACTaGTCAACTATGCATCTTATC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSTAFYD*STMHLI
Trigger: GATAAGATGCATAGTTGACCAGTCATAAAAGGCGGT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR TCA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGTCTTTTTCAGTTATTaGATAGGTGAGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEVFFSY*IGEKCC
Trigger: ACAGCACTTCTCACCTATTCAATAACTGAAAAAGAC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCCATTTAAAAATTCAATaGGTGAGAACTTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSHLKIQ*VRTSWT
Trigger: GGTCCAAGAAGTTCTCACCCATTGAATTTTTAAATG...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CCA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGCATTTAAAAATTCAATaGGTGAGAACTTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: LLCALNFNNVKPLQELLKHLKIQ*VRTSWT
Trigger: GGTCCAAGAAGTTCTCACCCATTGAATTTTTAAATG...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS CCA 90 bp GGCCGAGGCCGGTTGGGGACCGACAGAGACCTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTTGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GRGRLGTDRDLLGER*RNSPTASSSRLSST
Trigger: GGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp CCCTGCAGGAGCCACCTCCAGGCTCAACGCTCCACCATGGCCACCTaGCGCCCAGCCCAGCTGTGGAGAGGACAGCCTGGCCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: PCRSHLQAQRSTMAT*RPAQLWRGQPGLTL
Trigger: CAAGGTAAGGCCAGGCTGTCCTCTCCACAGCTGGGCTGGGCGGCAGGTGGCCATGGTGGAGCGTTGAGCCTGGAGGTGGCTCCTGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS GCA 90 bp CCCGCTGCTCACAAGGGCACTTCACAACACGCTGCGTATCGGGGGTaGCTGGTGGCGCCGTGCCTCACTCTCGGGACGGGGCCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: PAAHKGTSQHAAYRG*LVAPCLTLGTGPKR
Trigger: TCTCTTGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAGCAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp GGTGGAAGGCTGCGGGGGCTGACTTCTTCCTCCTCGGGGGTACCTTaGGCACAAGAGGCGGCGCCTCCAGAGGTGGTGGCACAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GGRLRGLTSSSSGVP*AQEAAPPEVVAQRL
Trigger: GAGCCTCTGTGCCACCACCTCTGGAGGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 90 bp GTGCTCTTGGCAGGCACAGGCCCTTCCCGGGACCCAGGGGCTCAGTaGGGAGGTCAGTTCAACGCCTGCTGCCAGCTCGCCGAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLLAGTGPSRDPGAQ*GGQFNACCQLAERL
Trigger: CAGCCTTTCGGCGAGCTGGCAGCAGGCGTTGAACTGACCTCCCCACTGAGCCCCTGGGTCCCGGGAAGGGCCTGTGCCTGCCAAGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS TCA 90 bp CTGGCTGTTGCTCTGCAGGACCTGCAGGTGGAAGGCTGCGGGGGCTaGCTTCTTCCTCCTCGGGGGTACCTTGGGCACAAGAGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LAVALQDLQVEGCGG*LLPPRGYLGHKRRR
Trigger: GCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAACAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS GCA 90 bp CTGTTCCCTATCCCCCGCTGCTCACAAGGGCACTTCACAACACGCTaGGTATCGGGGGTGCCTGGTGGCGCCGTGCCTCACTCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: LFPIPRCSQGHFTTR*VSGVPGGAVPHSRD
Trigger: GTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAGCAGCGGGGGATAGGGAACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp CTCACAAGGGCACTTCACAACACGCTGCGTATCGGGGGTGCCTGGTaGCGCCGTGCCTCACTCTCGGGACGGGGCCCAAGAGATCATCGG +
Preference number: 5 (lower is better)
Translates to: LTRALHNTLRIGGAW*RRASLSGRGPRDHR
Trigger: CCGATGATCTCTTGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp CAGGGTCGAAGTCGGCCCGGCCGCCTGGAGCTCCAAGGGGACAAATaGAGCCCAGGTTCAACCGCAGCCAGGAAGGCAACGTCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: QGRSRPGRLELQGDK*SPGSTAARKATSVH
Trigger: GTGCACAGACGTTGCCTTCCTGGCTGCGGTTGAACCTGGGCTCCATTTGTCCCCTTGGAGCTCCAGGCGGCCGGGCCGACTTCGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS TCA 90 bp CAGAGGTGGTGGCACAGAGGCTCCTGCCCCAGGAGGGGCTTCGTCTaGTGCTGGCTTCCTGTGGCTTGGCCTCTCTGCAGCTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: QRWWHRGSCPRRGFV*CWLPVAWPLCSFPR
Trigger: CCTGGGAAAGCTGCAGAGAGGCCAAGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCACCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS GCA 90 bp AAGCCTCAGGAAACGAAGGAGGGCTGGGCTGTCAGCTCCAGTCCCTaGAGGAGCCACCTCCAGGCTCAACGCTCCACCATGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: KPQETKEGWAVSSSP*RSHLQAQRSTMATC
Trigger: GCAGGTGGCCATGGTGGAGCGTTGAGCCTGGAGGTGGCTCCTGCAGGGACTGGAGCTGACAGCCCAGCCCTCCTTCGTTTCCTGAGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS GCA 90 bp GGCACTTCACAACACGCTGCGTATCGGGGGTGCCTGGTGGCGCCGTaGCTCACTCTCGGGACGGGGCCCAAGAGATCATCGGGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: GTSQHAAYRGCLVAP*LTLGTGPKRSSGRN
Trigger: GTTTCTACCCGATGATCTCTTGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp GTGAGGCCCTGGAGAAGCTGGCTGTTGCTCTGCAGGACCTGCAGGTaGAAGGCTGCGGGGGCTGACTTCTTCCTCCTCGGGGGTACCTTG +
Preference number: 5 (lower is better)
Translates to: VRPWRSWLLLCRTCR*KAAGADFFLLGGTL
Trigger: CAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 90 bp CAGGCTCAACGCTCCACCATGGCCACCTGCCGCCCAGCCCAGCTGTaGAGAGGACAGCCTGGCCTTACCTTGAAGGCTCTGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: QAQRSTMATCRPAQL*RGQPGLTLKALLST
Trigger: GGTGCTCAACAGAGCCTTCAAGGTAAGGCCAGGCTGTCCTCTCCACAGCTGGGCTGGGCGGCAGGTGGCCATGGTGGAGCGTTGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS CCA 90 bp CTGCTCACAAGGGCACTTCACAACACGCTGCGTATCGGGGGTGCCTaGTGGCGCCGTGCCTCACTCTCGGGACGGGGCCCAAGAGATCAT +
Preference number: 5 (lower is better)
Translates to: LLTRALHNTLRIGGA*WRRASLSGRGPRDH
Trigger: ATGATCTCTTGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS TCA 90 bp AGAGCTGGGGCGAGTCGAGCAGCCAGTCTGTCAGCTCCGCCGTCCTaGGCACGTTGCTCCGGAACTGCTTTCCTCCGTTCACGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAGASRAASLSAPPS*ARCSGTAFLRSRSR
Trigger: CCTGGAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCTGCTCGACTCGCCCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp TGCCAAATGCTACCAAGACGACCTCGGACCCTGCAGCCAGGCGAATaGGGCAGCCCTCTCTGGGGCACCACCTCGCTGTCGCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: CQMLPRRPRTLQPGE*GSPLWGTTSLSLTA
Trigger: AGCTGTCAGCGACAGCGAGGTGGTGCCCCAGAGAGGGCTGCCTCATTCGCCTGGCTGCAGGGTCCGAGGTCGTCTTGGTAGCATTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 90 bp AGTCACCAGGAGCGCCGTGCTGTCCAGCAGCATGCCCCCTTTGTCTaGCACCTCCTCGCCGTAGACGTCCCCAACCAGCAGCAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SHQERRAVQQHAPFV*HLLAVDVPNQQQLD
Trigger: ATCAAGCTGCTGCTGGTTGGGGACGTCTACGGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCTGGACAGCACGGCGCTCCTGGTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp GATCACAGCCGCTCCGCCCTTCCTTCTTGCACAGCTCCCACTCCCTaGAGGACTACGACAGAAGCTCCCAAATCCCTCCCCGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: DHSRSALPSCTAPTP*RTTTEAPKSLPAAA
Trigger: GGCTGCAGCGGGGAGGGATTTGGGAGCTTCTGTCGTAGTCCTGCAGGGAGTGGGAGCTGTGCAAGAAGGAAGGGCGGAGCGGCTGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp CGCTCACAGCTAACGCGAGAGACGAGGCAGGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGGATGGTGACCACCCCGCAGATGATC +
Preference number: 5 (lower is better)
Translates to: RSQLTRETRQALACL*EAYTVRMVTTPQMI
Trigger: GATCATCTGCGGGGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGCTGTGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp TGTCCTCCAGCTGGTCCAATGTGCCATAAGCATGACCTCGCACCCTaGGCTCTTGCCCAAGATGCTCCCCCTGCCTGGGACGTCCCACCG +
Preference number: 5 (lower is better)
Translates to: CPPAGPMCHKHDLAP*ALAQDAPPAWDVPP
Trigger: CGGTGGGACGTCCCAGGCAGGGGGAGCATCTTGGGCAAGAGCCCAGGGTGCGAGGTCATGCTTATGGCACATTGGACCAGCTGGAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp GTCCTAACTCTCCAGAGGTGCCCCATAACCCGGGGGTGGTGCAAGTaGAGGTCAAGGCCTCAGATGCCAACCAGGGCCCACCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLTLQRCPITRGWCK*RSRPQMPTRAHPLQ
Trigger: CTGCAGAGGGTGGGCCCTGGTTGGCATCTGAGGCCTTGACCTCCACTTGCACCACCCCCGGGTTATGGGGCACCTCTGGAGAGTTAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS TCA 90 bp TCGGAGAACGGTGGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGTCATCTTTGTACGTTGGATGCTGCT +
Preference number: 5 (lower is better)
Translates to: SENGGGTPRRLPAPA*APPGPRHLCTLDAA
Trigger: AGCAGCATCCAACGTACAAAGATGACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp TCCACGAAGTTGGACACATGGCCGTCGTCGTTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGCTCACAGCTAACGCGAGAGACGAGG +
Preference number: 5 (lower is better)
Translates to: STKLDTWPSSFTPRV*KRVPVRSQLTRETR
Trigger: CCTCGTCTCTCGCGTTAGCTGTGAGCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAACGACGACGGCCATGTGTCCAACTTCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp TGTCTGCCACCTCCTCGCCGTAGACGTCCCCAACCAGCAGCAGCTTaGTGGCCTCCTGCTTCACCCCGTCGAAGAAGTTGGACTGGATGG +
Preference number: 5 (lower is better)
Translates to: CLPPPRRRRPQPAAA*WPPASPRRRSWTGW
Trigger: CCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCTGCTGCTGGTTGGGGACGTCTACGGCGAGGAGGTGGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGTGGCCGAGGCCGGTaGGGGACCGACAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGGRGR*GTDRDL
Trigger: CAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGGTCTCTGCGGGGGTaGAGGTGGCCGAGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGSLRG*RWPRPV
Trigger: AACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCCTCCTCGGGGGTACCTaGGGCACAAGAGGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAALLGGT*GTRGGA
Trigger: GGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAG...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp AGGGCCCGAGTCACTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCAGCCTGGCCTTACCTaGAAGGCTCTGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: RARVTEHCRVHWSECWGSQPGLT*KALLST
Trigger: GGTGCTCAACAGAGCCTTCAAGGTAAGGCCAGGCTG...GCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAGTGACTCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS TCA 90 bp TGGCTTCATCGCTTTGGTGCCATCGCTGTCGGGGCTTGTAGCAGATaGAGTGCTGAGAAAGTCCCCTTGTGGGAAGACGGTGCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: WLHRFGAIAVGACSR*SAEKVPLWEDGARG
Trigger: GCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS GCA 90 bp CCGCCTCTGCTTCCCAGAAGGTTCACGACCACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATGTGCCTGTCGAAAGCAGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: PPLLPRRFTTTCCPY*SFRSTMCLSKAGAL
Trigger: CAATGCCCCTGCTTTCGACAGGCACATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCTTCTGGGAAGCAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp AGCCAGTCTGTCAGCTCCGCCGTCCTGAGCACGTTGCTCCGGAACTaGTTTCCTCCGTTCACGTTCCAGGTCCCCATAGCAATCCGGATC +
Preference number: 5 (lower is better)
Translates to: SQSVSSAVLSTLLRN*FPPFTFQVPIAIRI
Trigger: GATCCGGATTGCTATGGGGACCTGGAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp TGCAGTCCTCGCCAGCATGCCCACTGTAGGCTTGAGACACAGTGTTaGTGCCGGGTTTCCAGGACCCAGGAATCCCAGAAGGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: CSPRQHAHCRLETQC*CRVSRTQESQKVGS
Trigger: GCTGCCAACCTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTGTCTCAAGCCTACAGTGGGCATGCTGGCGAGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGCTTCCAGCTCCCGCTaGAGCTCCACCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAASSSR*SSTRSA
Trigger: CGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGCTTCCAGCTCCCGCTaGAGCTCCACCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHASSSR*SSTRSA
Trigger: CGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGGTGGCCGAGGCCGGTaGGGGACCGACAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFGGRGR*GTDRDL
Trigger: CAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATGTGGGGTCTCTGGTTaGGCTGCCCCCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLCGVSG*AAPGVG
Trigger: GCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGAGGGGCCTCAACGCTaGTCTCCGGGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAEGPQR*SPGARL
Trigger: CAATCGGGCCCCCGGAGACAAGCGTTGAGGCCCCTC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS GCA 90 bp ACCCCGCAGATGATCTTCAGCAGCCAGTCACAGCAGCTCACCTGGTaGTGCCTCAAGGGCACGTGCAACAGCTGGTTCCAGAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TPQMIFSSQSQQLTW*CLKGTCNSWFQKKE
Trigger: CTCCTTCTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCATCTGCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp ACCACCCCGCAGATGATCTTCAGCAGCCAGTCACAGCAGCTCACCTaGTGCTGCCTCAAGGGCACGTGCAACAGCTGGTTCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TTPQMIFSSQSQQLT*CCLKGTCNSWFQKK
Trigger: CTTCTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCATCTGCGGGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp CCTGCTTCACCCCGTCGAAGAAGTTGGACTGGATGGTTCGAGACATaGACCGGGCTCCATCCTTCAGCTTCCCCACCTTGGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PASPRRRSWTGWFET*TGLHPSASPPWPSL
Trigger: AAGGGAAGGCCAAGGTGGGGAAGCTGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp AGCAGCTTGATGGCCTCCTGCTTCACCCCGTCGAAGAAGTTGGACTaGATGGTTCGAGACATGGACCGGGCTCCATCCTTCAGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SSLMASCFTPSKKLD*MVRDMDRAPSFSFP
Trigger: GGGGAAGCTGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp GCAGCTCTGCCTTGGCAGCTGAAGCGCCAGCTGACACTGGGTCTATaGGATCTCTTTTGGGGCTCCTGGTTCCTGAGTCCAAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: AALPWQLKRQLTLGL*DLFWGSWFLSPKGL
Trigger: CAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 90 bp GCCTGCTGCCAGCTCGCCGAAAGGCTGGTGGAAATTCAAAAGCCATaGGTAGGCCCAGGTGGTAAGATGAGGCCAACCACAAGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ACCQLAERLVEIQKP*VGPGGKMRPTTSWG
Trigger: TCCCCAGCTTGTGGTTGGCCTCATCTTACCACCTGGGCCTACCCATGGCTTTTGAATTTCCACCAGCCTTTCGGCGAGCTGGCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS CCA 90 bp CCTCTGCCCTCCCCACTTCACCAGAAGAACTCCTCCTCATCCTTCTaGGCCAACTTGGCAGCAACTCCTCCGGGAAGCCTTCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PLPSPLHQKNSSSSF*ANLAATPPGSLPCS
Trigger: AGAGCAAGGAAGGCTTCCCGGAGGAGTTGCTGCCAAGTTGGCCCAGAAGGATGAGGAGGAGTTCTTCTGGTGAAGTGGGGAGGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp CTGTCTTCCCCCACTCCATCACAGGAGTGGCCTTCCCAAAGTCATTaGATCACAGCCGCTCCGCCCTTCCTTCTTGCACAGCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: LSSPTPSQEWPSQSH*ITAAPPFLLAQLPL
Trigger: GAGTGGGAGCTGTGCAAGAAGGAAGGGCGGAGCGGCTGTGATCCAATGACTTTGGGAAGGCCACTCCTGTGATGGAGTGGGGGAAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp TGTGCAGCCTGTCACCAACACCAGGAAGCTCAGAGACGTGCCACCTaGAAAGGAAATCAGACAGGAGAGCTCAGGGTCGAAGTCGGCCCG +
Preference number: 5 (lower is better)
Translates to: CAACHQHQEAQRRAT*KGNQTGELRVEVGP
Trigger: CGGGCCGACTTCGACCCTGAGCTCTCCTGTCTGATTTCCTTTCCAGGTGGCACGTCTCTGAGCTTCCTGGTGTTGGTGACAGGCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGCAGCCGCAGCCCTTaGCTCAGGGCCATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSSRSP*LRAMRV
Trigger: GACCCTCATGGCCCTGAGCAAAGGGCTGCGGCTGCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAGCAGCATGCCCCCTTaGTCTGCCACCTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSSMPP*SATSSP
Trigger: CGGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGGGTCTCTGCGGGGGTaGAGGTGGCCGAGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQGSLRG*RWPRPV
Trigger: AACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCC...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTCCTCGGGGGTACCTaGGGCACAAGAGGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALLGGT*GTRGGA
Trigger: GGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATGGAGAAGCTGGCTGTaGCTCTGCAGGACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVWRSWL*LCRTCR
Trigger: CCTGCAGGTCCTGCAGAGCAACAGCCAGCTTCTCCA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAAGGAGGACCTTGAAGGCTCTGTaGAGCACCTCCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: HCRVHWSECWGSLRKRRRTLKAL*STSSPP
Trigger: AGGCGGAGAGGAGGTGCTCAACAGAGCCTTCAAGGT...CCTCCTTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS GCA 90 bp CCGCAGATGATCTTCAGCAGCCAGTCACAGCAGCTCACCTGGTGCTaGCTCAAGGGCACGTGCAACAGCTGGTTCCAGAAGAAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: PQMIFSSQSQQLTWC*LKGTCNSWFQKKEF
Trigger: GAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCATCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp TCAGAGAAGAGGATTATGGGCAGCATAGTCTTAGTCTCCAGGTGCTaGAGGGGTGTACCCGTGGTGCTCTTGGCAGGCACAGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SEKRIMGSIVLVSRC*RGVPVVLLAGTGPS
Trigger: GGAAGGGCCTGTGCCTGCCAAGAGCACCACGGGTACACCCCTGCAGCACCTGGAGACTAAGACTATGCTGCCCATAATCCTCTTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS GCA 90 bp AGTCCTCGCCAGCATGCCCACTGTAGGCTTGAGACACAGTGTTGCTaGCGGGTTTCCAGGACCCAGGAATCCCAGAAGGTTGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SPRQHAHCRLETQCC*RVSRTQESQKVGSN
Trigger: ATTGCTGCCAACCTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTGTCTCAAGCCTACAGTGGGCATGCTGGCGAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 90 bp GCCTTCCCAAAGTCATTGGATCACAGCCGCTCCGCCCTTCCTTCTTaGACAGCTCCCACTCCCTGCAGGACTACGACAGAAGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: AFPKSLDHSRSALPS*TAPTPCRTTTEAPK
Trigger: TTTGGGAGCTTCTGTCGTAGTCCTGCAGGGAGTGGGAGCTGTGCAAGAAGGAAGGGCGGAGCGGCTGTGATCCAATGACTTTGGGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 90 bp GGAGCCCAGGTTCAACCGCAGCCAGGAAGGCAACGTCTGTGCACCTaGAACTTCCCATGGCATTGCCCAACTCAATGGCTCAAGAACCTG +
Preference number: 5 (lower is better)
Translates to: GAQVQPQPGRQRLCT*NFPWHCPTQWLKNL
Trigger: CAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTGCGGTTGAACCTGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTACAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTG +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLQALAC*WEAYTV
Trigger: CACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTG...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGAGCACTGCCGTGTTCACTGGTCGGAATGCTGGGGAAGCCTCAGGAAACGAATCTGTCTCCACGAAGTaGGACACATGGCCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: LSTAVFTGRNAGEASGNESVSTK*DTWPSS
Trigger: CGACGACGGCCATGTGTCCAACTTCGTGGAGACAGA...TTCGTTTCCTGAGGCTTCCCCAGCATTCCGACCAGTGAACACGGCAGTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTCAGCCCCAGGGTCTaGAGCTGCAGATGCAGGACC +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLSPRV*SCRCRT
Trigger: GGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGTGGCCGAGGCCGGTaGGGGACCGACAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGGRGR*GTDRDL
Trigger: CAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGGTGGCCGAGGCCGGTaGGGGACCGACAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTGGRGR*GTDRDL
Trigger: CAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGGTCTCTGCGGGGGTaGAGGTGGCCGAGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGSLRG*RWPRPV
Trigger: AACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACCAGGAGACACCGGATaGCTGCTTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEPGDTG*LLLPPG
Trigger: CCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTGTGGGGTCTCTGGTTaGGCTGCCCCCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQCGVSG*AAPGVG
Trigger: GCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCTCCTCGGGGGTACCTaGGGCACAAGAGGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLLGGT*GTRGGA
Trigger: GGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS TCA 90 bp AGTTGGCAGTGGGAGACACGGGGGCCATGCTGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTTTCAGCCAGTCCTTGGTCTTCGGTC +
Preference number: 5 (lower is better)
Translates to: SWQWETRGPCCLVSE*SPLANLSASPWSSV
Trigger: GACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACAGCATGGCCCCCGTGTCTCCCACTGCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp AGAAGGAGTTCCCCCATTCAGAGCTGTCATCCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGCGAGACCCATCGTTTGGCCATGAGA +
Preference number: 5 (lower is better)
Translates to: RRSSPIQSCHPPASA*GQSGQSETHRLAMR
Trigger: TCTCATGGCCAAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS GCA 90 bp AAGTCAGAGAAGAGGATTATGGGCAGCATAGTCTTAGTCTCCAGGTaGTGCAGGGGTGTACCCGTGGTGCTCTTGGCAGGCACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: KSEKRIMGSIVLVSR*CRGVPVVLLAGTGP
Trigger: AGGGCCTGTGCCTGCCAAGAGCACCACGGGTACACCCCTGCAGCACCTGGAGACTAAGACTATGCTGCCCATAATCCTCTTCTCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS GCA 90 bp CTGCCTCAGAAGAAGGAGTTCCCCCATTCAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTCAGGTCAAAGCGAGACCCATCGTTT +
Preference number: 5 (lower is better)
Translates to: LPQKKEFPHSELSSP*FCVRTVRSKRDPSF
Trigger: AAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCTTCTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS GCA 90 bp CCTCACCAGAAGAAGGAGTTCCCCCATTCAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTCAGGTCAAAGCGAGACCCATCGTTT +
Preference number: 5 (lower is better)
Translates to: PHQKKEFPHSELSSP*FCVRTVRSKRDPSF
Trigger: AAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCTTCTGGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp GTGGTGAAGAAGGTTCCAGAAGGGGTCCTGATAATCACCAAGAAGTaGGGCTGCCTCTGGCTTCATCGCTTTGGTGCCATCGCTGTCGGG +
Preference number: 5 (lower is better)
Translates to: VVKKVPEGVLIITKK*GCLWLHRFGAIAVG
Trigger: CCCGACAGCGATGGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGTGATTATCAGGACCCCTTCTGGAACCTTCTTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 90 bp CAACGTCTGTGCACCTGCAACTTCCCATGGCATTGCCCAACTCAATaGCTCAAGAACCTGCCCTGTCCTGTAAGCTTCAGGCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QRLCTCNFPWHCPTQ*LKNLPCPVSFRRGF
Trigger: GAAGCCCCGCCTGAAGCTTACAGGACAGGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp CAACCGCAGCCAGGAAGGCAACGTCTGTGCACCTGCAACTTCCCATaGCATTGCCCAACTCAATGGCTCAAGAACCTGCCCTGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: QPQPGRQRLCTCNFP*HCPTQWLKNLPCPV
Trigger: TACAGGACAGGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGCAGCATGCCCCCTTaGTCTGCCACCTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASSMPP*SATSSP
Trigger: CGGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGCCGTCCTGAGCACGTaGCTCCGGAACTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEAVLST*LRNCFP
Trigger: AGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCCAGCAAACAGGAGTaGGCAGTGGGAGACACGGGG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSSKQE*AVGDTG
Trigger: CCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGTGAGAGCAGGTGACTaGCTGGGAGGAGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAVRAGD*LGGASA
Trigger: AGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCAC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGTGAGAGCAGGTGACTaGCTGGGAGGAGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHVRAGD*LGGASA
Trigger: AGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCAC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCTTCCAGCTCCCGCTaGAGCTCCACCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTASSSR*SSTRSA
Trigger: CGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHMLQGP*GPRHLG
Trigger: CCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCAT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGAGGGGCCTCAACGCTaGTCTCCGGGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYREGPQR*SPGARL
Trigger: CAATCGGGCCCCCGGAGACAAGCGTTGAGGCCCCTC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGAGGGGCCTCAACGCTaGTCTCCGGGGGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKEGPQR*SPGARL
Trigger: CAATCGGGCCCCCGGAGACAAGCGTTGAGGCCCCTC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGCTGAGAAAGTCCCCTaGTGGGAAGACGGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFAEKVP*WEDGAR
Trigger: GCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGGTGGCAGCTCTGCCTaGGCAGCTGAAGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAGGSSA*AAEAPA
Trigger: AGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCACC...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS TCA 90 bp CCACATGGCTTTGAAGGACTCCACAAAGCGGTCAACGATGGGTTTTaGACTCAGCCCCAGGGTCTTGAGCTGCAGATGCAGGACCTCGAG +
Preference number: 5 (lower is better)
Translates to: PHGFEGLHKAVNDGF*TQPQGLELQMQDLE
Trigger: CTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACCGCTTTGTGGAGTCCTTCAAAGCCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp TGGTTCCAGAAGAAGGAGTTCCCCCATTCAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTCAGGTCAAAGCGAGACCCATCGTTT +
Preference number: 5 (lower is better)
Translates to: WFQKKEFPHSELSSP*FCVRTVRSKRDPSF
Trigger: AAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCTTCTGGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp CTGGTGCCCACGGTGCTCCCTCTGCTGCCTCCACTCTATCCTCAATaGATGATGCACAGAGCATTTAAAAAGCCCTGCATCCTAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LVPTVLPLLPPLYPQ*MMHRAFKKPCILGP
Trigger: TGGCCCTAGGATGCAGGGCTTTTTAAATGCTCTGTGCATCATGCATTGAGGATAGAGTGGAGGCAGCAGAGGGAGCACCGTGGGCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 90 bp AGCTGGGGAAGAAACACATCACAGAAGGCATCAGCGAGCGTCTCCTaGTCATTCCTGTTCATTCACACCCGGCTTGCCAAGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SWGRNTSQKASASVS*SFLFIHTRLAKLAS
Trigger: GGAAGCCAGCTTGGCAAGCCGGGTGTGAATGAACAGGAATGAGCAGGAGACGCTCGCTGATGCCTTCTGTGATGTGTTTCTTCCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS GCA 90 bp CAGCCAGGAAGGCAACGTCTGTGCACCTGCAACTTCCCATGGCATTaGCCAACTCAATGGCTCAAGAACCTGCCCTGTCCTGTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QPGRQRLCTCNFPWH*PTQWLKNLPCPVSF
Trigger: GAAGCTTACAGGACAGGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 90 bp ACAAATGGAGCCCAGGTTCAACCGCAGCCAGGAAGGCAACGTCTGTaGACCTGCAACTTCCCATGGCATTGCCCAACTCAATGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TNGAQVQPQPGRQRL*TCNFPWHCPTQWLK
Trigger: CTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTGCGGTTGAACCTGGGCTCCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp AAGCCATGGGTAGGCCCAGGTGGTAAGATGAGGCCAACCACAAGCTaGGGAAAAGATGAGTTCCTCCAGCATCCAAACACCCACACCCAC +
Preference number: 5 (lower is better)
Translates to: KPWVGPGGKMRPTTS*GKDEFLQHPNTHTH
Trigger: GTGGGTGTGGGTGTTTGGATGCTGGAGGAACTCATCTTTTCCCCAGCTTGTGGTTGGCCTCATCTTACCACCTGGGCCTACCCATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGCAGCCGCAGCCCTTaGCTCAGGGCCATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSSRSP*LRAMRV
Trigger: GACCCTCATGGCCCTGAGCAAAGGGCTGCGGCTGCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355585.9
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCTGTCTCCACGAAGTaGGACACATGGCCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSVSTK*DTWPSS
Trigger: CGACGACGGCCATGTGTCCAACTTCGTGGAGACAGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGCCCAGAGCAGCTTCTaGAAGGCTCTGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAAQSSF*KALLST
Trigger: GGTGCTCAACAGAGCCTTCAAGAAGCTGCTCTGGGC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGCCCAGAGCAGCTTCTaGAAGGCTCTGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEAQSSF*KALLST
Trigger: GGTGCTCAACAGAGCCTTCAAGAAGCTGCTCTGGGC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTCAGCCCCAGGGTCTaGAGCTGCAGATGCAGGACC +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALSPRV*SCRCRT
Trigger: GGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACTGCCTGTGAACACCTaGCTCAGGCTGTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLELPVNT*LRLWPF
Trigger: GAATGGCCACAGCCTGAGCAAGGTGTTCACAGGCAG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTGCGGCATTTGTCGCTaGTATCGTAGGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAACGICR*YRRRLS
Trigger: GCTCAGCCGCCTACGATACAAGCGACAAATGCCGCA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTGCGGCATTTGTCGCTaGTATCGTAGGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHCGICR*YRRRLS
Trigger: GCTCAGCCGCCTACGATACAAGCGACAAATGCCGCA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCGTGAGAGCAGGTGACTaGCTGGGAGGAGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFVRAGD*LGGASA
Trigger: AGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCAC...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACCAGGAGACACCGGATaGCTGCTTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTAPGDTG*LLLPPG
Trigger: CCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGG...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGG +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFMLQGP*GPRHLG
Trigger: CCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCAT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTCTGGCTTCATCGCTTaGGTGCCATCGCTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSGFIA*VPSLSG
Trigger: CCCCGACAGCGATGGCACCAAAGCGATGAAGCCAGA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGGTGGCAGCTCTGCCTaGGCAGCTGAAGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAGGSSA*AAEAPA
Trigger: AGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCACC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTATCCAAGGAACCCATCTaGCTCTCTCCCCCAAACTCT +
Preference number: 5 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVSKEPI*LSPPNS
Trigger: AGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGA...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTGTACCCGTGGTGCTCTaGGCAGGCACAGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAVPVVL*AGTGPS
Trigger: GGAAGGGCCTGTGCCTGCCAAGAGCACCACGGGTAC...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CAA 90 bp GCAGTCAAGACAGTTCATCCGCAAAGTGCCTTTCTGAAAACGTGGACTGACGTTCAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTG +
Preference number: 5 (lower is better)
Translates to: AVKTVHPQSAFLKTWTDVQALAC*WEAYTV
Trigger: CACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTG...AACGTCAGTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTTGAAGGCTCTGTaGAGCACCTCCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAFLKAL*STSSPP
Trigger: AGGCGGAGAGGAGGTGCTCAACAGAGCCTTCAAGAA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATTCTTGAAGGCTCTGTaGAGCACCTCCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLFLKAL*STSSPP
Trigger: AGGCGGAGAGGAGGTGCTCAACAGAGCCTTCAAGAA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLKLCTV*VRSRQS
Trigger: TGACTGCCTGGACCGAACCAACACTGTGCAGAGCTT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCTCAGCCCCAGGGTCTaGAGCTGCAGATGCAGGACC +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLSPRV*SCRCRT
Trigger: GGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACGGTCAACGATGGGTTTaGAACTCAGCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHGQRWV*NSAPGS
Trigger: AGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACC...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAACCCCGTCGAAGAAGTaGGACTGGATGGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLETPSKK*DWMVRD
Trigger: GTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCCAGCAAACAGGAGTaGGCAGTGGGAGACACGGGG +
Preference number: 5 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQSSKQE*AVGDTG
Trigger: CCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGA...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGGGTCTCTGCGGGGGTaGAGGTGGCCGAGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: SISRISKSFRTVCFYVVCGSLRG*RWPRPV
Trigger: AACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCCAGGAGACACCGGATaGCTGCTTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAPGDTG*LLLPPG
Trigger: CCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCTGAGAAAGTCCCCTaGTGGGAAGACGGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTAEKVP*WEDGAR
Trigger: GCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS TCA 90 bp GACACTTCCTGGAAAACCCTCTCCCGAGCACCCACATCGACTTCCTaGACTTCCACCTCCACGATCGCCAGCACAGGTCTTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: DTSWKTLSRAPTSTS*TSTSTIASTGLLFL
Trigger: AAGAAAAAGAAGACCTGTGCTGGCGATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 90 bp CACTGTGTCGATGGCTACGTCCCTTCACCTGCTAACCTAGGACACTaGCAAGCTGCCCAAATAACACAAGCAGAGGGACAGGGACCTAAA +
Preference number: 5 (lower is better)
Translates to: HCVDGYVPSPANLGH*QAAQITQAEGQGPK
Trigger: TTTAGGTCCCTGTCCCTCTGCTTGTGTTATTTGGGCAGCTTGGCAGTGTCCTAGGTTAGCAGGTGAAGGGACGTAGCCATCGACACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS-3UTR CAA 90 bp GACACAGGGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: DTGMWGGSPSSGRNQEFTYASVS*PYCPLM
Trigger: CATTAAAGGACAGTATGGCAAGCTCACGGACGCGTA...AGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CAA 90 bp GGATGTGGGGAGGGTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAGCGAGACCCATCGTTaGGCCATGAGAAATAGAACA +
Preference number: 5 (lower is better)
Translates to: GCGEGPLLPAEIRNSLLGSETHR*AMRNRT
Trigger: TGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCT...CCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGACCCTCCCCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAAGAGACCACATGGCTTaGAAGGACTCCACAAAGCGG +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLERDHMA*KDSTKR
Trigger: CCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTCT...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCTGCCTGTGAACACCTaGCTCAGGCTGTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQLPVNT*LRLWPF
Trigger: GAATGGCCACAGCCTGAGCAAGGTGTTCACAGGCAG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTCCAGCAAACAGGAGTaGGCAGTGGGAGACACGGGG +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKASSKQE*AVGDTG
Trigger: CCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGTGAGAGCAGGTGACTaGCTGGGAGGAGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRVRAGD*LGGASA
Trigger: AGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCAC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAAGGTCCGCGTCATCTTaGTACGTTGGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLRSASS*YVGCCF
Trigger: GAAGCAGCATCCAACGTACAAAGATGACGCGGACCT...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTCTGCCTCCTGGGCATaGGTGGTTTTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASASWA*VVLICL
Trigger: CAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCTGCCTCCTGGGCATaGGTGGTTTTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSASWA*VVLICL
Trigger: CAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGG +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTMLQGP*GPRHLG
Trigger: CCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCAT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACTCAAGGTTGGCTTCTaGATGGCAGGAACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLELKVGF*MAGTLG
Trigger: ACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATGGAGAAGCTGGCTGTaGCTCTGCAGGACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKWRSWL*LCRTCR
Trigger: CCTGCAGGTCCTGCAGAGCAACAGCCAGCTTCTCCA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTTCTGGCTTCATCGCTTaGGTGCCATCGCTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASGFIA*VPSLSG
Trigger: CCCCGACAGCGATGGCACCAAAGCGATGAAGCCAGA...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTCTATGGGATCTCTTTaGGGGCTCCTGGTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASMGSL*GLLVPE
Trigger: CTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCGATGAAGCTCTGCACAGTGTTGGTTCGGTCCAGGCAGTCAAGACAGTTCATCTCTAGCTTCCCACCTTaGGCAAATGTATCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AMKLCTVLVRSRQSRQFISSFPP*ANVSGP
Trigger: GGGCCCTGATACATTTGCCAAAGGTGGGAAGCTAGA...GATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAATCATTCACACCCGGCTaGCCAAGCTGGCTTCCCACC +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKSFTPG*PSWLPT
Trigger: GGTGGGAAGCCAGCTTGGCAAGCCGGGTGTGAATGA...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS TCA 90 bp GTCCCCATAGCAATCCGGATCCGCTTGAAATTTGTGAATTCGGACTaGCGCTCAGTCATAGCTTTCAGGATCCTGGGAGTCACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VPIAIRIRLKFVNSD*RSVIAFRILGVTRS
Trigger: GCTCCTGGTGACTCCCAGGATCCTGAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAATTTCAAGCGGATCCGGATTGCTATGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp CGCAGGTCCTCTGGAAACTCGTTTTTCTCTTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTGGCATCCAGGGGGCCCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RRSSGNSFFSSKVGD*RFTTTVASRGPWKE
Trigger: CTCCTTCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGAGGACCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp CTTCATACCGTCCACGTCCAGGACACTGAGAGCCGAGTGACTGTCTaGAAAAGTTACCAGCATCTGCCCTTGGTTGATCCTGACAAGAAC +
Preference number: 5 (lower is better)
Translates to: LHTVHVQDTESRVTV*KSYQHLPLVDPDKN
Trigger: GTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGGACGGTATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp GCTCCTGGTAGAAGTCTTGCCGTCTGCAAAATTGAATACTGTCCATaGGTGCCGGAGGAGATGGACGCATCTGAAGCCGACTTTTTCACC +
Preference number: 5 (lower is better)
Translates to: APGRSLAVCKIEYCP*VPEEMDASEADFFT
Trigger: GGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEYASVS*PYCPLM
Trigger: CATTAAAGGACAGTATGGCAAGCTCACGGACGCGTA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCTGTCTCCACGAAGTaGGACACATGGCCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSVSTK*DTWPSS
Trigger: CGACGACGGCCATGTGTCCAACTTCGTGGAGACAGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTCTGTCTCCACGAAGTaGGACACATGGCCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKASVSTK*DTWPSS
Trigger: CGACGACGGCCATGTGTCCAACTTCGTGGAGACAGA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCCCAGAGCAGCTTCTaGAAGGCTCTGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTAQSSF*KALLST
Trigger: GGTGCTCAACAGAGCCTTCAAGAAGCTGCTCTGGGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCCTTTCTGAAAACGTGGACTGACGTTCTCCCCCTTTGTGAACACATCGAAGTCAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: AFLKTWTDVLPLCEHIEVKLCTV*VRSRQS
Trigger: TGACTGCCTGGACCGAACCAACACTGTGCAGAGCTT...GACTTCGATGTGTTCACAAAGGGGGAGAACGTCAGTCCACGTTTTCAGAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCTGCCTGTGAACACCTaGCTCAGGCTGTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALPVNT*LRLWPF
Trigger: GAATGGCCACAGCCTGAGCAAGGTGTTCACAGGCAG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTTGCGGCATTTGTCGCTaGTATCGTAGGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKACGICR*YRRRLS
Trigger: GCTCAGCCGCCTACGATACAAGCGACAAATGCCGCA...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATACCAGCATCTGCCCTaGGTTGATCCTGACAAGAAC +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLYQHLP*VDPDKN
Trigger: GTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACCTTTCAGCCAGTCCTaGGTCTTCGGTCTAATCTTC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEPFSQS*VFGLIF
Trigger: GAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLGCCFF*VRAGDL
Trigger: CAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCC...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAGGTCCGCGTCATCTTaGTACGTTGGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFRSASS*YVGCCF
Trigger: GAAGCAGCATCCAACGTACAAAGATGACGCGGACCT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CACTGCTGTGCGAGCCTCTGTACGAGGCTCCCAGATACAACAGGCGGTACAGTAAAAATGGACAGTCTGTaGCTCAAACTGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: HCCASLCTRLPDTTGGTVKMDSL*LKLFFR
Trigger: CCGGAAGAACAGTTTGAGCAACAGACTGTCCATTTT...TACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTCTATGGGATCTCTTTaGGGGCTCCTGGTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSMGSL*GLLVPE
Trigger: CTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGGTGGCAGCTCTGCCTaGGCAGCTGAAGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SISRISKSFRTVCFYVVCGGSSA*AAEAPA
Trigger: AGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCACC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAATACAGATGCCAGTCTTaGGGCTGCTACTGTCCTTAC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEYRCQS*GCYCPY
Trigger: GTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTA...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS TCA 90 bp CTGCGTGCGGACAGTCAGGTCAAAGCGAGACCCATCGTTTGGCCATaGGAAATAGAACACCCCCGAGCTGAGGATTTTCTTCAAAGCTAT +
Preference number: 5 (lower is better)
Translates to: LRADSQVKARPIVWP*EIEHPRAEDFLQSY
Trigger: ATAGCTTTGAAGAAAATCCTCAGCTCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS TCA 90 bp CAACCTGAAGCCCTGGCTGTTCCCAGAACAGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACACTCCATCGTCCATGTAAATCATCT +
Preference number: 5 (lower is better)
Translates to: QPEALAVPRTAERSL*SGQKMTLHRPCKSS
Trigger: AGATGATTTACATGGACGATGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGCTGTTCTGGGAACAGCCAGGGCTTCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCAGCGAGACCCATCGTTaGGCCATGAGAAATAGAACA +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASETHR*AMRNRT
Trigger: TGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCT...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAGCGAGACCCATCGTTaGGCCATGAGAAATAGAACA +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSETHR*AMRNRT
Trigger: TGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTKLCTV*VRSRQS
Trigger: TGACTGCCTGGACCGAACCAACACTGTGCAGAGCTT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGGTCAACGATGGGTTTaGAACTCAGCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAGQRWV*NSAPGS
Trigger: AGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACC...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCGCAATCCGGATCCGCTaGAAATTTGTGAATTCGGAC +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAAAIRIR*KFVNSD
Trigger: GTCCGAATTCACAAATTTCAAGCGGATCCGGATTGC...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAAGCAATCCGGATCCGCTaGAAATTTGTGAATTCGGAC +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEAIRIR*KFVNSD
Trigger: GTCCGAATTCACAAATTTCAAGCGGATCCGGATTGC...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATTGGTAGTACTGGCATaGACAATATTCCCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLLVVLA*TIFPAL
Trigger: GAGCGCAGGGAATATTGTCAATGCCAGTACTACCAA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTCACCCCACATCTTCTaGTTGGTAGTACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LVEGCLEGGRYAFYRTAASPHIF*LVVLAL
Trigger: CAATGCCAGTACTACCAACAAGAAGATGTGGGGTGA...GGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTCACCCCACATCTTCTaGTTGGTAGTACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSPHIF*LVVLAL
Trigger: CAATGCCAGTACTACCAACAAGAAGATGTGGGGTGA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTACCAGCATCTGCCCTaGGTTGATCCTGACAAGAAC +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFYQHLP*VDPDKN
Trigger: GTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCCTTTCAGCCAGTCCTaGGTCTTCGGTCTAATCTTC +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFPFSQS*VFGLIF
Trigger: GAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLPSAK*NTVHGC
Trigger: GCACCCATGGACAGTATTCAATTTTGCAGACGGCAA...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATCTATGGGATCTCTTTaGGGGCTCCTGGTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASMGSL*GLLVPE
Trigger: CTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS TCA 90 bp CTGTTCCCAGAACAGCGGAACGGAGCCTCTGATCTGGACAAAAGATaGCACTCCATCGTCCATGTAAATCATCTGCTCTGTCTCCACGAA +
Preference number: 5 (lower is better)
Translates to: LFPEQRNGASDLDKR*HSIVHVNHLLCLHE
Trigger: TTCGTGGAGACAGAGCAGATGATTTACATGGACGATGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGCTGTTCTGGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp CTCAAGAGGGTCTCCAATTTCTCTAGCTTCCCACCTTTGGCAAACTaGTGGAAGTCAAAATTGATCATAGGCGTGTCGCCCGCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LKRVSNFSSFPPLAN*WKSKLIIGVSPAWQ
Trigger: TTGCCACGCGGGCGACACGCCTATGATCAATTTTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAGAGAAATTGGAGACCCTCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp GCCCACCAGCTGTGCCGAAGTCAACAGAATGTATCTATGAGAGCGTaGGATGGCTTTCTGAAGCTGTTCACCCCACATCTTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: AHQLCRSQQNVSMRA*DGFLKLFTPHLLVG
Trigger: ACCAACAAGAAGATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATAGATACATTCTGTTGACTTCGGCACAGCTGGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp AGAGGTCGTCTCCCCCGAGTTCACTGTCCGAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGTCTTCATCGTCTTCAAGAATATCCC +
Preference number: 5 (lower is better)
Translates to: RGRLPRVHCPRLQAD*IHPPSSLHRLQEYP
Trigger: GGGATATTCTTGAAGACGATGAAGACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAGACGACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 90 bp CGAGAGACCCATATAGAATCGAGTCAATATCCAAGAATGCGATCATaGCACTTCCACAATAGAGGTCTGCGCCACGAACCACCCCACGTC +
Preference number: 5 (lower is better)
Translates to: RETHIESSQYPRMRS*HFHNRGLRHEPPHV
Trigger: GACGTGGGGTGGTTCGTGGCGCAGACCTCTATTGTGGAAGTGTCATGATCGCATTCTTGGATATTGACTCGATTCTATATGGGTCTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CCA 90 bp TTGCCGTCTGCAAAATTGAATACTGTCCATGGGTGCCGGAGGAGATaGACGCATCTGAAGCCGACTTTTTCACCATTAAACCGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LPSAKLNTVHGCRRR*THLKPTFSPLNRLE
Trigger: CTCCAACCGGTTTAATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 90 bp GAGCTTGCCATACTGTCCTTTAATGACTTCCTTTTCTTCTGGAGCTaGGGAAGAAACACATCACAGAAGGCATCAGCGAGCGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ELAILSFNDFLFFWS*GRNTSQKASASVSC
Trigger: GCAGGAGACGCTCGCTGATGCCTTCTGTGATGTGTTTCTTCCCCAGCTCCAGAAGAAAAGGAAGTCATTAAAGGACAGTATGGCAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS-3UTR CAA 90 bp GCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACAGGTGTGTCTGACTTaGGTGTCAACATCTAGATCA +
Preference number: 5 (lower is better)
Translates to: AASCCDDQEGITEGPLLEQVCLT*VSTSRS
Trigger: TGATCTAGATGTTGACACCAAAGTCAGACACACCTG...TTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACAGCATCTGCCCTTGGTaGATCCTGACAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHSICPW*ILTRTI
Trigger: AATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCT...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp CTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGCCTTTCAGCCAGTCCTaGGTCTTCGGTCTAATCTTC +
Preference number: 5 (lower is better)
Translates to: LEGGRYAFYRTAAFKAAQPFSQS*VFGLIF
Trigger: GAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGG...CTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGGTCCGCGTCATCTTaGTACGTTGGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAARSASS*YVGCCF
Trigger: GAAGCAGCATCCAACGTACAAAGATGACGCGGACCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAGGTCCGCGTCATCTTaGTACGTTGGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKRSASS*YVGCCF
Trigger: GAAGCAGCATCCAACGTACAAAGATGACGCGGACCT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCTTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLPSAK*NTVHGC
Trigger: GCACCCATGGACAGTATTCAATTTTGCAGACGGCAA...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACCTCCTGGTAGAAGTCTaGCCGTCTGCAAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: ASCCDDQEGITEGPLLEHLLVEV*PSAKLN
Trigger: ATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAG...GTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTCAAGGTTGGCTTCTaGATGGCAGGAACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLKVGF*MAGTLG
Trigger: ACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTCTCAAGGTTGGCTTCTaGATGGCAGGAACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKALKVGF*MAGTLG
Trigger: ACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAG...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTCTGGCTTCATCGCTTaGGTGCCATCGCTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: SISRISKSFRTVCFYVVCSGFIA*VPSLSG
Trigger: CCCCGACAGCGATGGCACCAAAGCGATGAAGCCAGA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCCAAGGAACCCATCTaGCTCTCTCCCCCAAACTCT +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSKEPI*LSPPNS
Trigger: AGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GTCCCCTTCTTCCGGCAGAAATCAGGAATTCACTTCTGGGGAATCCAAAGCACCCTACCATGCCCAGCCTaGATTCACGTGCATTTTGAA +
Preference number: 5 (lower is better)
Translates to: VPFFRQKSGIHFWGIQSTLPCPA*IHVHFE
Trigger: TTCAAAATGCACGTGAATCAAGGCTGGGCATGGTAG...GGTGCTTTGGATTCCCCAGAAGTGAATTCCTGATTTCTGCCGGAAGAAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS TCA 90 bp CCTCCTCCTTGGCCTCTTCCTGAAGAGGGTAAAAGTCAGTGGCAGTaGTTTTGTAGATTTCAGCATCTGGAATTCTGCCCACAGATGTGC +
Preference number: 5 (lower is better)
Translates to: PPPWPLPEEGKSQWQ*FCRFQHLEFCPQMC
Trigger: GCACATCTGTGGGCAGAATTCCAGATGCTGAAATCTACAAAATCACTGCCACTGACTTTTACCCTCTTCAGGAAGAGGCCAAGGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS TCA 90 bp CCAGTGGGTCAAACACCTGCAGTGCTGTCCTCTTTTCTTGGTCACTaGTTGTCACCCAGTGACCTAAGGTTTTGTGTTCATGATCTGGTG +
Preference number: 5 (lower is better)
Translates to: PVGQTPAVLSSFLGH*LSPSDLRFCVHDLV
Trigger: CACCAGATCATGAACACAAAACCTTAGGTCACTGGGTGACAATCAGTGACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS GCA 90 bp CTGGTAGAAGTCTTGCCGTCTGCAAAATTGAATACTGTCCATGGGTaGCGGAGGAGATGGACGCATCTGAAGCCGACTTTTTCACCATTA +
Preference number: 5 (lower is better)
Translates to: LVEVLPSAKLNTVHG*RRRWTHLKPTFSPL
Trigger: TAATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 90 bp GCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGTCATGTTTTTaGCAGTGGGTCAAACACCTGCAGTGCTGTCCTCTTTTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AFYRTAAFKAAQSCF*QWVKHLQCCPLFLV
Trigger: GACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACTGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAGCCGTCCTGAGCACGTaGCTCCGGAACTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLAVLST*LRNCFP
Trigger: AGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGC...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCTGCGGCATTTGTCGCTaGTATCGTAGGCGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SISRISKSFRTVCFYVVCCGICR*YRRRLS
Trigger: GCTCAGCCGCCTACGATACAAGCGACAAATGCCGCA...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GAAGCAGCATCGTGCTGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTATCACTGTCTAGAAGGTaGAGTTCTCCAGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: EAASCCDDQEGITEGPLLSLSRR*SSPAVL
Trigger: TAAAACAGCTGGAGAACTCAACCTTCTAGACAGTGA...TAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACAGCACGATGCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAGCATCTGCCCTTGGTaGATCCTGACAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFSICPW*ILTRTI
Trigger: AATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCT...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTTACCAGCATCTGCCCTaGGTTGATCCTGACAAGAAC +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTYQHLP*VDPDKN
Trigger: GTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTA...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTGCCFF*VRAGDL
Trigger: CAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRGCCFF*VRAGDL
Trigger: CAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCC...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTALPSAK*NTVHGC
Trigger: GCACCCATGGACAGTATTCAATTTTGCAGACGGCAA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTAATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGG +
Preference number: 5 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLMLQGP*GPRHLG
Trigger: CCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCAT...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTGTGGGGTCTCTGGTTaGGCTGCCCCCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSCGVSG*AAPGVG
Trigger: GCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATGTGGGGTCTCTGGTTaGGCTGCCCCCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGECGVSG*AAPGVG
Trigger: GCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCACTGCAAGCAACTTaGGAGGAGCTTACTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTALQAT*EELTFP
Trigger: GGGAAAAGTAAGCTCCTCCAAAGTTGCTTGCAGTGC...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS TCA 90 bp TGTGATGACCAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTaGGATCAAACGGAAGATCCAGATGTGTCTACAGATGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: CDDQEGITEGPLLEH*DQTEDPDVSTDASL
Trigger: AAGACTGGCATCTGTAGACACATCTGGATCTTCCGTTTGATCTCAGTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTGGTCATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS GCA 90 bp ATTTCGTCGTCATCTCCCAGCACCACACACACTCGGTTTGCTGAATaGTTCCTAAATAAATTCCTGCCAAATGCTACCAAGACGACCTCG +
Preference number: 5 (lower is better)
Translates to: ISSSSPSTTHTRFAE*FLNKFLPNATKTTS
Trigger: CGAGGTCGTCTTGGTAGCATTTGGCAGGAATTTATTTAGGAAGCATTCAGCAAACCGAGTGTGTGTGGTGCTGGGAGATGACGACGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 90 bp TATAGGACTGCAGCCTTCAAAGCTGCTCAGTCATGTTTTTGCCAGTaGGTCAAACACCTGCAGTGCTGTCCTCTTTTCTTGGTCACTGAT +
Preference number: 5 (lower is better)
Translates to: YRTAAFKAAQSCFCQ*VKHLQCCPLFLVTD
Trigger: ATCAGTGACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACTGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCAGTCCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGCGAGACCCATCGTTaGGCCATGAGAAATAGAACA +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSETHR*AMRNRT
Trigger: TGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTG +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVIQALAC*WEAYTV
Trigger: CACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGAGCAGCATGCCCCCTTaGTCTGCCACCTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSSMPP*SATSSP
Trigger: CGGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCAATCCGGATCCGCTaGAAATTTGTGAATTCGGAC +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKAIRIR*KFVNSD
Trigger: GTCCGAATTCACAAATTTCAAGCGGATCCGGATTGC...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLPSAK*NTVHGC
Trigger: GCACCCATGGACAGTATTCAATTTTGCAGACGGCAA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAAGTCTAGTCATTAGGTaGACCTATTTGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASLVIR*TYLAAS
Trigger: GGAAGCAGCCAAATAGGTCAACCTAATGACTAGACT...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCCTCTGTCCCATTTATTaGGTATCTGGAACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: VEGCLEGGRYAFYRTAAFLCPIY*VSGTKR
Trigger: TCTCTTCGTTCCAGATACCAAATAAATGGGACAGAG...GAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS CCA 90 bp AAGAGGGTAAAAGTCAGTGGCAGTGATTTTGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGTGCAGCCTGTCACCAACACCAGGAA +
Preference number: 5 (lower is better)
Translates to: KRVKVSGSDFVDFSI*NSAHRCAACHQHQE
Trigger: TTCCTGGTGTTGGTGACAGGCTGCACATCTGTGGGCAGAATTCCAGATGCTGAAATCTACAAAATCACTGCCACTGACTTTTACCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTG +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEQALAC*WEAYTV
Trigger: CACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCATCACTGTCTAGAAGGTaGAGTTCTCCAGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LLVEGCLEGGRYAFYRTASLSRR*SSPAVL
Trigger: TAAAACAGCTGGAGAACTCAACCTTCTAGACAGTGA...TGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTCAGGTGTGTCTGACTTaGGTGTCAACATCTAGATCA +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAAQVCLT*VSTSRS
Trigger: TGATCTAGATGTTGACACCAAAGTCAGACACACCTG...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTGCTAGCATCTGCCCTTGGTaGATCCTGACAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: CLEGGRYAFYRTAAFKAASICPW*ILTRTI
Trigger: AATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCT...AGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGCATCTGCCCTTGGTaGATCCTGACAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTSICPW*ILTRTI
Trigger: AATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGCTCCTGGTAGAAGTCTaGCCGTCTGCAAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRLLVEV*PSAKLN
Trigger: ATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAG...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACCAGGAGACACCGGATaGCTGCTTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEPGDTG*LLLPPG
Trigger: CCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAAAAATGGACAGTCTGTaGCTCAAACTGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKKMDSL*LKLFFR
Trigger: CCGGAAGAACAGTTTGAGCAACAGACTGTCCATTTT...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGCTGAGAAAGTCCCCTaGTGGGAAGACGGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEAEKVP*WEDGAR
Trigger: GCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAAGCTATTAGGTTGACCTATTaGGCTGCTTCCGACTCTGAT +
Preference number: 5 (lower is better)
Translates to: GCLEGGRYAFYRTAAFKAIRLTY*AASDSD
Trigger: ATCAGAGTCGGAAGCAGCCAAATAGGTCAACCTAAT...AGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTATTAGGTTGACCTATTaGGCTGCTTCCGACTCTGAT +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTIRLTY*AASDSD
Trigger: ATCAGAGTCGGAAGCAGCCAAATAGGTCAACCTAAT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGCCGTCCTGAGCACGTaGCTCCGGAACTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEAVLST*LRNCFP
Trigger: AGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp ATGTCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGTCACTGTCTAGAAGGTaGAGTTCTCCAGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: MSLLVEGCLEGGRYAFYRSLSRR*SSPAVL
Trigger: TAAAACAGCTGGAGAACTCAACCTTCTAGACAGTGA...CCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTCCAGCAAACAGGAGTaGGCAGTGGGAGACACGGGG +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKSSKQE*AVGDTG
Trigger: CCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATCTGCCTCCTGGGCATaGGTGGTTTTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLSASWA*VVLICL
Trigger: CAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTTCTGGTGGAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTAGATGCACAAACGTTTaGGCCAGTGTGCCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SLLVEGCLEGGRYAFYRTRCTNV*ASVPLN
Trigger: ATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCT...AGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCAATATCGCGTATCAGCAAGAGTTTTCGCACTGTGTGCTTTTATGTGGTATGCGCACTGCAAGCAACTTaGGAGGAGCTTACTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SISRISKSFRTVCFYVVCALQAT*EELTFP
Trigger: GGGAAAAGTAAGCTCCTCCAAAGTTGCTTGCAGTGC...GCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp GAGGGATGTCTAGAGGGAGGAAGGTATGCATTCTATAGGACTGCAGCCTTCAAACTCTGTCCCATTTATTaGGTATCTGGAACGAAGAGA +
Preference number: 5 (lower is better)
Translates to: EGCLEGGRYAFYRTAAFKLCPIY*VSGTKR
Trigger: TCTCTTCGTTCCAGATACCAAATAAATGGGACAGAG...TTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS GCA 90 bp ACTAGAACACTGAGATCAAACGGAAGATCCAGATGTGTCTACAGATaGCAGTCTTTGGGCTGCTACTGTCCTTACAAACTCATGTCTTTG +
Preference number: 5 (lower is better)
Translates to: TRTLRSNGRSRCVYR*QSLGCYCPYKLMSL
Trigger: CAAAGACATGAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGACACATCTGGATCTTCCGTTTGATCTCAGTGTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVIKLCTV*VRSRQS
Trigger: TGACTGCCTGGACCGAACCAACACTGTGCAGAGCTT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATAACCCCGTCGAAGAAGTaGGACTGGATGGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVITPSKK*DWMVRD
Trigger: GTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGT...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTTCTTGAAGGCTCTGTaGAGCACCTCCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKFLKAL*STSSPP
Trigger: AGGCGGAGAGGAGGTGCTCAACAGAGCCTTCAAGAA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAGGTCAACGATGGGTTTaGAACTCAGCCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGEGQRWV*NSAPGS
Trigger: AGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACC...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAACCCCGTCGAAGAAGTaGGACTGGATGGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGETPSKK*DWMVRD
Trigger: GTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTATCACCCCACATCTTCTaGTTGGTAGTACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLSPHIF*LVVLAL
Trigger: CAATGCCAGTACTACCAACAAGAAGATGTGGGGTGA...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATACTCAAGGTTGGCTTCTaGATGGCAGGAACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVILKVGF*MAGTLG
Trigger: ACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAG...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATATACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVIYASVS*PYCPLM
Trigger: CATTAAAGGACAGTATGGCAAGCTCACGGACGCGTA...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGAGAGACCACATGGCTTaGAAGGACTCCACAAAGCGG +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKRDHMA*KDSTKR
Trigger: CCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTCT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAAAGAGACCACATGGCTTaGAAGGACTCCACAAAGCGG +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGERDHMA*KDSTKR
Trigger: CCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTCT...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp CTACAAGGTCACAATAAGAAGCCCTGGATGGTAGCATCAAAGACGAAACATTTACTCCTGGTAGAAGTCTaGCCGTCTGCAAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: LQGHNKKPWMVASKTKHLLLVEV*PSAKLN
Trigger: ATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAG...TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAATCTGCCTCCTGGGCATaGGTGGTTTTGATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGESASWA*VVLICL
Trigger: CAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGA...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTACCAGCATCTGCCCTaGGTTGATCCTGACAAGAAC +
Preference number: 5 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSYQHLP*VDPDKN
Trigger: GTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKGCCFF*VRAGDL
Trigger: CAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCC...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCTTGGTAGTACTGGCATaGACAATATTCCCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSLVVLA*TIFPAL
Trigger: GAGCGCAGGGAATATTGTCAATGCCAGTACTACCAA...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGTTGGTAGTACTGGCATaGACAATATTCCCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKLVVLA*TIFPAL
Trigger: GAGCGCAGGGAATATTGTCAATGCCAGTACTACCAA...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TCTCTAATCCTTACTTTATACATCAACCTTCAGGTGGCTCCCCAAAATGTTATATCACTGTCTAGAAGGTaGAGTTCTCCAGCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SLILTLYINLQVAPQNVISLSRR*SSPAVL
Trigger: TAAAACAGCTGGAGAACTCAACCTTCTAGACAGTGA...TATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGTGAACGCTTTGATACATTACTTTGTTTATACTTACACACACATCAGGGAGAACTCCTGGTAGAAGTCTaGCCGTCTGCAAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: SERFDTLLCLYLHTHQGELLVEV*PSAKLN
Trigger: ATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAG...TTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCAAAATGGACAGTCTGTaGCTCAAACTGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSKMDSL*LKLFFR
Trigger: CCGGAAGAACAGTTTGAGCAACAGACTGTCCATTTT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp AGATACAACAGGCGGTACAGTAAGATTTCACTACTGAACTTCTTATTAAATAGCAGTCTAGTCATTAGGTaGACCTATTTGGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RYNRRYSKISLLNFLLNSSLVIR*TYLAAS
Trigger: GGAAGCAGCCAAATAGGTCAACCTAATGACTAGACT...GCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGATAGCGATGTGCATCTaGGCAAATCAGCTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKIAMCI*ANQLLQ
Trigger: TTGGAGAAGCTGATTTGCCAAGATGCACATCGCTAT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS-3UTR CAA 90 bp TTATTATGTGCCTTGAACTTCAACAACGTTAAACCGTTACAGGAATTGCTTAAGAGATGCACAAACGTTTaGGCCAGTGTGCCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: LLCALNFNNVKPLQELLKRCTNV*ASVPLN
Trigger: ATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCT...CTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355585.9
ENST00000638626.1
CDS TCA 90 bp AGTTCCATGGATATATTTAGTGGGATACTAGACAGCAGTTACAAATaGATGCACCAGAGCTATAACATCAACACGACTGTATCTCAAAAA +
Preference number: 5 (lower is better)
Translates to: SSMDIFSGILDSSYK*MHQSYNINTTVSQK
Trigger: TTTTTGAGATACAGTCGTGTTGATGTTATAGCTCTGGTGCATTCATTTGTAACTGCTGTCTAGTATCCCACTAAATATATCCATGGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CCA 72 bp GGGGTCTCTGCGGGGGTTGAGGTGGCCGAGGCCGGTTaGGGACCGACAGAGACCTGCTCGGAGAACGGTGGC +
Preference number: 6 (lower is better)
Translates to: GVSAGVEVAEAG*GPTETCSENGG
Trigger: GCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp GAGGTGGCCGAGGCCGGTTGGGGACCGACAGAGACCTaGTCGGAGAACGGTGGCGGAACTCCCCGACGGCTT +
Preference number: 6 (lower is better)
Translates to: EVAEAGWGPTET*SENGGGTPRRL
Trigger: AAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCGGCCTCGGCCACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp AGCCACCTCCAGGCTCAACGCTCCACCATGGCCACCTaGCGCCCAGCCCAGCTGTGGAGAGGACAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SHLQAQRSTMAT*RPAQLWRGQPG
Trigger: GCCAGGCTGTCCTCTCCACAGCTGGGCTGGGCGGCAGGTGGCCATGGTGGAGCGTTGAGCCTGGAGGTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485863.1
CDS CCA 72 bp GGGTACCTTGGGCACAAGAGGCGGCGCCTCCAGAGGTaGTGGCACAGAGGCTCCTGCCCCAGGAGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: GYLGHKRRRLQR*WHRGSCPRRGF
Trigger: GAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCGCCTCTTGTGCCCAAGGTACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 72 bp AGGGCACTTCACAACACGCTGCGTATCGGGGGTGCCTaGTGGCGCCGTGCCTCACTCTCGGGACGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: RALHNTLRIGGA*WRRASLSGRGP
Trigger: TGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 72 bp GTCTCCAGGTGCTGCAGGGGTGTACCCGTGGTGCTCTaGGCAGGCACAGGCCCTTCCCGGGACCCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: VSRCCRGVPVVL*AGTGPSRDPGA
Trigger: AGCCCCTGGGTCCCGGGAAGGGCCTGTGCCTGCCAAGAGCACCACGGGTACACCCCTGCAGCACCTGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS GCA 72 bp CACAAGGGCACTTCACAACACGCTGCGTATCGGGGGTaGCTGGTGGCGCCGTGCCTCACTCTCGGGACGGGG +
Preference number: 6 (lower is better)
Translates to: HKGTSQHAAYRG*LVAPCLTLGTG
Trigger: CCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp CGGTTGGGGACCGACAGAGACCTGCTCGGAGAACGGTaGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: RLGTDRDLLGER*RNSPTASSSRL
Trigger: CAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp CTGCGGGGGCTGACTTCTTCCTCCTCGGGGGTACCTTaGGCACAAGAGGCGGCGCCTCCAGAGGTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LRGLTSSSSGVP*AQEAAPPEVVA
Trigger: TGCCACCACCTCTGGAGGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 72 bp GCACTTCACAACACGCTGCGTATCGGGGGTGCCTGGTaGCGCCGTGCCTCACTCTCGGGACGGGGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: ALHNTLRIGGAW*RRASLSGRGPR
Trigger: TCTTGGGCCCCGTCCCGAGAGTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp GAGCGCCGTGCTGTCCAGCAGCATGCCCCCTTTGTCTaGCACCTCCTCGCCGTAGACGTCCCCAACCAGCAG +
Preference number: 6 (lower is better)
Translates to: ERRAVQQHAPFV*HLLAVDVPNQQ
Trigger: CTGCTGGTTGGGGACGTCTACGGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCTGGACAGCACGGCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp GGAAGCGGATGCCGACGGCGCCCTTGTTCCCCGCCTTaGCCCCCATGCCCGTCTTCACTGTGTCGATGGCTA +
Preference number: 6 (lower is better)
Translates to: GSGCRRRPCSPP*PPCPSSLCRWL
Trigger: TAGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGGGCGCCGTCGGCATCCGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp ATCCCCCGCTGCTCACAAGGGCACTTCACAACACGCTaGGTATCGGGGGTGCCTGGTGGCGCCGTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: IPRCSQGHFTTR*VSGVPGGAVPH
Trigger: GTGAGGCACGGCGCCACCAGGCACCCCCGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAGCAGCGGGGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp CCTCGCACCCTGGGCTCTTGCCCAAGATGCTCCCCCTaGCTGGGACGTCCCACCGCCATCTGCCCAACAAGA +
Preference number: 6 (lower is better)
Translates to: PRTLGSCPRCSP*LGRPTAICPTR
Trigger: TCTTGTTGGGCAGATGGCGGTGGGACGTCCCAGGCAGGGGGAGCATCTTGGGCAAGAGCCCAGGGTGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp CTGCTGTCATCCTGGGAGTCGGTAGCTCCCGAGAGCTaGGGCGAGTCGAGCAGCCAGTCTGTCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: LLSSWESVAPES*GESSSQSVSSA
Trigger: GGCGGAGCTGACAGACTGGCTGCTCGACTCGCCCCAGCTCTCGGGAGCTACCGACTCCCAGGATGACAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp AGTCGGCCCGGCCGCCTGGAGCTCCAAGGGGACAAATaGAGCCCAGGTTCAACCGCAGCCAGGAAGGCAACG +
Preference number: 6 (lower is better)
Translates to: SRPGRLELQGDK*SPGSTAARKAT
Trigger: CGTTGCCTTCCTGGCTGCGGTTGAACCTGGGCTCCATTTGTCCCCTTGGAGCTCCAGGCGGCCGGGCCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS TCA 72 bp TGGCACAGAGGCTCCTGCCCCAGGAGGGGCTTCGTCTaGTGCTGGCTTCCTGTGGCTTGGCCTCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WHRGSCPRRGFV*CWLPVAWPLCS
Trigger: GCTGCAGAGAGGCCAAGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS TCA 72 bp GCTCTGCAGGACCTGCAGGTGGAAGGCTGCGGGGGCTaGCTTCTTCCTCCTCGGGGGTACCTTGGGCACAAG +
Preference number: 6 (lower is better)
Translates to: ALQDLQVEGCGG*LLPPRGYLGHK
Trigger: CTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 72 bp CTAACGCGAGAGACGAGGCAGGCCTTGGCCTGCTTGTaGGAGGCATACACGGTGCGGATGGTGACCACCCCG +
Preference number: 6 (lower is better)
Translates to: LTRETRQALACL*EAYTVRMVTTP
Trigger: CGGGGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp GTGCGCTCACAGCTAACGCGAGAGACGAGGCAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTGCGGATGGTGACCACCCCGCAGATG +
Preference number: 6 (lower is better)
Translates to: VRSQLTRETRQALAC*WEAYTVRMVTTPQM
Trigger: CATCTGCGGGGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGCTGTGAGCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp CGAGTGCCTGTGCGCTCACAGCTAACGCGAGAGACGAGGCAGGCCTaGGCCTGCTTGTGGGAGGCATACACGGTGCGGATGGTGACCACC +
Preference number: 6 (lower is better)
Translates to: RVPVRSQLTRETRQA*ACLWEAYTVRMVTT
Trigger: GGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGCTGTGAGCGCACAGGCACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp CTGCCCCCGGTGTGGGCTCTGGTTCAGAGGATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGGCTTCTTCGGAGGCACCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LPPVWALVQRMLQGP*GPRHLGLLRRHLLW
Trigger: CCAGAGGAGGTGCCTCCGAAGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GGTGGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTTaGGCTCCACCAGGTCCGCGTCATCTTTGTACGTTG +
Preference number: 6 (lower is better)
Translates to: GGGTPRRLPAPA*APPGPRHLCTL
Trigger: CAACGTACAAAGATGACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GGACGTCCCACCGCCATCTGCCCAACAAGACCTCCATaGCCCCTTCTCCACGCACCTCCCGCCTGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: GRPTAICPTRPP*PLLHAPPACLY
Trigger: GTAGAGACAGGCGGGAGGTGCGTGGAGAAGGGGTCATGGAGGTCTTGTTGGGCAGATGGCGGTGGGACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp GCGCCTGTGGGGTCTCTGGTTTGGCTGCCCCCGGTGTaGGCTCTGGTTCAGAGGATGCTTCAAGGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: APVGSLVWLPPV*ALVQRMLQGPL
Trigger: CAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp GAGTCTTCCTCTGCAGCAATCCCAGGGCACAGGTGCTaGTGCCCACGGTGCTCCCTCTGCTGCCTCCACTCT +
Preference number: 6 (lower is better)
Translates to: ESSSAAIPGHRC*CPRCSLCCLHS
Trigger: AGAGTGGAGGCAGCAGAGGGAGCACCGTGGGCACCAGCACCTGTGCCCTGGGATTGCTGCAGAGGAAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CAA 72 bp CAGCTAACGCGAGAGACGAGGCAGGCCTTGGCCTGCTaGTGGGAGGCATACACGGTGCGGATGGTGACCACC +
Preference number: 6 (lower is better)
Translates to: QLTRETRQALAC*WEAYTVRMVTT
Trigger: GGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp GTGCGCTCACAGCTAACGCGAGAGACGAGGCAGGCCTaGGCCTGCTTGTGGGAGGCATACACGGTGCGGATG +
Preference number: 6 (lower is better)
Translates to: VRSQLTRETRQA*ACLWEAYTVRM
Trigger: CATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGCTGTGAGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp CGGTGGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTaGAGCTCCACCAGGTCCGCGTCATCTTTGTACGTT +
Preference number: 6 (lower is better)
Translates to: RWRNSPTASSSR*SSTRSASSLYV
Trigger: AACGTACAAAGATGACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp CTCGGAGAACGGTGGCGGAACTCCCCGACGGCTTCCAGCTCCCGCTaGAGCTCCACCAGGTCCGCGTCATCTTTGTACGTTGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: LGERWRNSPTASSSR*SSTRSASSLYVGCC
Trigger: GCAGCATCCAACGTACAAAGATGACGCGGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp CAGCTGGTCCAATGTGCCATAAGCATGACCTCGCACCCTGGGCTCTaGCCCAAGATGCTCCCCCTGCCTGGGACGTCCCACCGCCATCTG +
Preference number: 6 (lower is better)
Translates to: QLVQCAISMTSHPGL*PKMLPLPGTSHRHL
Trigger: CAGATGGCGGTGGGACGTCCCAGGCAGGGGGAGCATCTTGGGCAAGAGCCCAGGGTGCGAGGTCATGCTTATGGCACATTGGACCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 90 bp GGCGAGTCGAGCAGCCAGTCTGTCAGCTCCGCCGTCCTGAGCACGTaGCTCCGGAACTGCTTTCCTCCGTTCACGTTCCAGGTCCCCATA +
Preference number: 6 (lower is better)
Translates to: GESSSQSVSSAVLST*LRNCFPPFTFQVPI
Trigger: TATGGGGACCTGGAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCTGCTCGACTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CCTCCTCGCCGTAGACGTCCCCAACCAGCAGCAGCTTaGTGGCCTCCTGCTTCACCCCGTCGAAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: PPRRRRPQPAAA*WPPASPRRRSW
Trigger: CCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCTGCTGCTGGTTGGGGACGTCTACGGCGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GCGAGTCGAGCAGCCAGTCTGTCAGCTCCGCCGTCCTaGGCACGTTGCTCCGGAACTGCTTTCCTCCGTTCA +
Preference number: 6 (lower is better)
Translates to: ASRAASLSAPPS*ARCSGTAFLRS
Trigger: TGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCTGCTCGACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp TTGGACACATGGCCGTCGTCGTTCACGCCACGGGTGTaGAAGCGAGTGCCTGTGCGCTCACAGCTAACGCGA +
Preference number: 6 (lower is better)
Translates to: LDTWPSSFTPRV*KRVPVRSQLTR
Trigger: TCGCGTTAGCTGTGAGCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAACGACGACGGCCATGTGTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp GTGGCATCCAGGGGGCCCTGGAAGGAGGACACTTCCTaGAAAACCCTCTCCCGAGCACCCACATCGACTTCC +
Preference number: 6 (lower is better)
Translates to: VASRGPWKEDTS*KTLSRAPTSTS
Trigger: GGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTTCCAGGGCCCCCTGGATGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp CAATGTGCCATAAGCATGACCTCGCACCCTGGGCTCTaGCCCAAGATGCTCCCCCTGCCTGGGACGTCCCAC +
Preference number: 6 (lower is better)
Translates to: QCAISMTSHPGL*PKMLPLPGTSH
Trigger: GTGGGACGTCCCAGGCAGGGGGAGCATCTTGGGCAAGAGCCCAGGGTGCGAGGTCATGCTTATGGCACATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp GTCAGCTCCGCCGTCCTGAGCACGTTGCTCCGGAACTaGTTTCCTCCGTTCACGTTCCAGGTCCCCATAGCA +
Preference number: 6 (lower is better)
Translates to: VSSAVLSTLLRN*FPPFTFQVPIA
Trigger: TGCTATGGGGACCTGGAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp GACCCAGGGGCTCAGTGGGGAGGTCAGTTCAACGCCTaGTGCCAGCTCGCCGAAAGGCTGGTGGAAATTCAA +
Preference number: 6 (lower is better)
Translates to: DPGAQWGGQFNA*CQLAERLVEIQ
Trigger: TTGAATTTCCACCAGCCTTTCGGCGAGCTGGCAGCAGGCGTTGAACTGACCTCCCCACTGAGCCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS GCA 72 bp ATTCCTGCCAAATGCTACCAAGACGACCTCGGACCCTaGAGCCAGGCGAATGAGGCAGCCCTCTCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: IPAKCYQDDLGP*SQANEAALSGA
Trigger: TGCCCCAGAGAGGGCTGCCTCATTCGCCTGGCTGCAGGGTCCGAGGTCGTCTTGGTAGCATTTGGCAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 72 bp AGCAGCCAGTCTGTCAGCTCCGCCGTCCTGAGCACGTaGCTCCGGAACTGCTTTCCTCCGTTCACGTTCCAG +
Preference number: 6 (lower is better)
Translates to: SSQSVSSAVLST*LRNCFPPFTFQ
Trigger: CTGGAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp GTGTGGGCTCTGGTTCAGAGGATGCTTCAAGGTCCCTaGGGGCCACGGCACTTAGGGCTTCTTCGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: VWALVQRMLQGP*GPRHLGLLRRH
Trigger: GTGCCTCCGAAGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp GTCATGACCATGCCTGCAGTCCTCGCCAGCATGCCCACTGTAGGCTaGAGACACAGTGTTGCTGCCGGGTTTCCAGGACCCAGGAATCCC +
Preference number: 6 (lower is better)
Translates to: VMTMPAVLASMPTVG*RHSVAAGFPGPRNP
Trigger: GGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTGTCTCAAGCCTACAGTGGGCATGCTGGCGAGGACTGCAGGCATGGTCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp TCTCCGCCTCTGCTTCCCAGAAGGTTCACGACCACCTaGTGCCCGTACTGCTCCTTCAGAAGCACCATGTGC +
Preference number: 6 (lower is better)
Translates to: SPPLLPRRFTTT*CPYCSFRSTMC
Trigger: GCACATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCTTCTGGGAAGCAGAGGCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp CGCCAGCATGCCCACTGTAGGCTTGAGACACAGTGTTaGTGCCGGGTTTCCAGGACCCAGGAATCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: RQHAHCRLETQC*CRVSRTQESQK
Trigger: CTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTGTCTCAAGCCTACAGTGGGCATGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CCA 72 bp AAAGTGTGGGACCCTGGCCAGCAAGTCAGCATCCCCTaGGAGCCTGTTAGACATGCAGATTCCTGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: KVWDPGQQVSIP*EPVRHADSCRP
Trigger: TGGGCGGCAGGAATCTGCATGTCTAACAGGCTCCCAGGGGATGCTGACTTGCTGGCCAGGGTCCCACACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS TCA 72 bp TTCCGCTCCTTCACCTGGGACTGCCCGGCCGTCAGGTaGCTACATATGAAGCAGAAGCTGGTGCTGTGGAAC +
Preference number: 6 (lower is better)
Translates to: FRSFTWDCPAVR*LHMKQKLVLWN
Trigger: GTTCCACAGCACCAGCTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp TGGAAAACCCTCTCCCGAGCACCCACATCGACTTCCTaGACTTCCACCTCCACGATCGCCAGCACAGGTCTG +
Preference number: 6 (lower is better)
Translates to: WKTLSRAPTSTS*TSTSTIASTGL
Trigger: CAGACCTGTGCTGGCGATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp TCCCCCATTCAGAGCTGTCATCCCCCTGCTTCTGCGTaGGGACAGTCAGGTCAAAGCGAGACCCATCGTTTG +
Preference number: 6 (lower is better)
Translates to: SPIQSCHPPASA*GQSGQSETHRL
Trigger: CAAACGATGGGTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS GCA 72 bp TCACAGCAGCTCACCTGGTGCTGCCTCAAGGGCACGTaGAACAGCTGGTTCCAGAAGAAGGAGTTCCCCCAT +
Preference number: 6 (lower is better)
Translates to: SQQLTWCCLKGT*NSWFQKKEFPH
Trigger: ATGGGGGAACTCCTTCTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp ATCTTCAGCAGCCAGTCACAGCAGCTCACCTGGTGCTaGCTCAAGGGCACGTGCAACAGCTGGTTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: IFSSQSQQLTWC*LKGTCNSWFQK
Trigger: CTTCTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp ATGATCTTCAGCAGCCAGTCACAGCAGCTCACCTGGTaGTGCCTCAAGGGCACGTGCAACAGCTGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: MIFSSQSQQLTW*CLKGTCNSWFQ
Trigger: CTGGAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp AGCTGCAGATGCAGGACCTCGAGCGCGATGAAGCTCTaGACAGTGTTGGTTCGGTCCAGGCAGTCAAGACAG +
Preference number: 6 (lower is better)
Translates to: SCRCRTSSAMKL*TVLVRSRQSRQ
Trigger: CTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCCTGCATCTGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp ACGATGGGTTTTGAACTCAGCCCCAGGGTCTTGAGCTaGAGATGCAGGACCTCGAGCGCGATGAAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: TMGFELSPRVLS*RCRTSSAMKLC
Trigger: GCAGAGCTTCATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAGTTCAAAACCCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp GCCCAGGTTCAACCGCAGCCAGGAAGGCAACGTCTGTaGACCTGCAACTTCCCATGGCATTGCCCAACTCAA +
Preference number: 6 (lower is better)
Translates to: AQVQPQPGRQRL*TCNFPWHCPTQ
Trigger: TTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTGCGGTTGAACCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp CAGATGATCTTCAGCAGCCAGTCACAGCAGCTCACCTaGTGCTGCCTCAAGGGCACGTGCAACAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: QMIFSSQSQQLT*CCLKGTCNSWF
Trigger: GAACCAGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp CCTCCTGCTTCACCCCGTCGAAGAAGTTGGACTGGATaGTTCGAGACATGGACCGGGCTCCATCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PPASPRRRSWTG*FETWTGLHPSA
Trigger: AGCTGAAGGATGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp ATGGCCTCCTGCTTCACCCCGTCGAAGAAGTTGGACTaGATGGTTCGAGACATGGACCGGGCTCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: MASCFTPSKKLD*MVRDMDRAPSF
Trigger: GAAGGATGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp CCTTGGCAGCTGAAGCGCCAGCTGACACTGGGTCTATaGGATCTCTTTTGGGGCTCCTGGTTCCTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: PWQLKRQLTLGL*DLFWGSWFLSP
Trigger: TGGACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAGCTGGCGCTTCAGCTGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 72 bp CCCACTCCATCACAGGAGTGGCCTTCCCAAAGTCATTaGATCACAGCCGCTCCGCCCTTCCTTCTTGCACAG +
Preference number: 6 (lower is better)
Translates to: PTPSQEWPSQSH*ITAAPPFLLAQ
Trigger: CTGTGCAAGAAGGAAGGGCGGAGCGGCTGTGATCCAATGACTTTGGGAAGGCCACTCCTGTGATGGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 72 bp TGCAGGACCTCGAGCGCGATGAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCAAGACAGTTCATCCGC +
Preference number: 6 (lower is better)
Translates to: CRTSSAMKLCTV*VRSRQSRQFIR
Trigger: GCGGATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCCTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp CGGTCAACGATGGGTTTTGAACTCAGCCCCAGGGTCTaGAGCTGCAGATGCAGGACCTCGAGCGCGATGAAG +
Preference number: 6 (lower is better)
Translates to: RSTMGFELSPRV*SCRCRTSSAMK
Trigger: CTTCATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp AGCTTGATGGCCTCCTGCTTCACCCCGTCGAAGAAGTaGGACTGGATGGTTCGAGACATGGACCGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: SLMASCFTPSKK*DWMVRDMDRAP
Trigger: TGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp AGCTGCAGATGCAGGACCTCGAGCGCGATGAAGCTCTGCACAGTGTaGGTTCGGTCCAGGCAGTCAAGACAGTTCATCCGCAAAGTGCCT +
Preference number: 6 (lower is better)
Translates to: SCRCRTSSAMKLCTV*VRSRQSRQFIRKVP
Trigger: AGGCACTTTGCGGATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCAGAGCTTCATCGCGCTCGAGGTCCTGCATCTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp TCCACCAGGTCCGCGTCATCTTTGTACGTTGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTGCTGGGAGGAGCCAGTGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: STRSASSLYVGCCFF*VRAGDLLGGASAVG
Trigger: CCCCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGCGGACCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp TGGGAGACACGGGGGCCATGCTGTCTCGTTTCCGAATaGTCTCCTCTCGCAAACCTTTCAGCCAGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: WETRGPCCLVSE*SPLANLSASPW
Trigger: CCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACGAGACAGCATGGCCCCCGTGTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CGCTTTGGTGCCATCGCTGTCGGGGCTTGTAGCAGATaGAGTGCTGAGAAAGTCCCCTTGTGGGAAGACGGT +
Preference number: 6 (lower is better)
Translates to: RFGAIAVGACSR*SAEKVPLWEDG
Trigger: ACCGTCTTCCCACAAGGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCCGACAGCGATGGCACCAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS TCA 72 bp CCACGTCCCAGACTCATCCTCCTTACTCCTCCACCTTaGAGCCAGGCTTCGGATGCTTTGGGGCCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: PRPRLILLTPPP*SQASDALGPLV
Trigger: AACCAAAGGCCCCAAAGCATCCGAAGCCTGGCTTCAAGGTGGAGGAGTAAGGAGGATGAGTCTGGGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS TCA 72 bp TGGAAAACCCTCTCCCGAGCACCCACATCGACTTCCTaGACTTCCACCTCCACGATCGCCAGCACAGGTCTT +
Preference number: 6 (lower is better)
Translates to: WKTLSRAPTSTS*TSTSTIASTGL
Trigger: AAGACCTGTGCTGGCGATCGTGGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp AAGAAGGAGTTCCCCCATTCAGAGCTGTCATCCCCCTaGTTCTGCGTGCGGACAGTCAGGTCAAAGCGAGAC +
Preference number: 6 (lower is better)
Translates to: KKEFPHSELSSP*FCVRTVRSKRD
Trigger: GTCTCGCTTTGACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS GCA 72 bp CTTCCCAGAAGGTTCACGACCACCTGCTGCCCGTACTaGTCCTTCAGAAGCACCATGTGCCTGTCGAAAGCA +
Preference number: 6 (lower is better)
Translates to: LPRRFTTTCCPY*SFRSTMCLSKA
Trigger: TGCTTTCGACAGGCACATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCTTCTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp CCAGAAGGGGTCCTGATAATCACCAAGAAGTGGGGCTaGCTCTGGCTTCATCGCTTTGGTGCCATCGCTGTC +
Preference number: 6 (lower is better)
Translates to: PEGVLIITKKWG*LWLHRFGAIAV
Trigger: GACAGCGATGGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGTGATTATCAGGACCCCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS GCA 72 bp AAGAGGATTATGGGCAGCATAGTCTTAGTCTCCAGGTaGTGCAGGGGTGTACCCGTGGTGCTCTTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: KRIMGSIVLVSR*CRGVPVVLLAG
Trigger: GCCTGCCAAGAGCACCACGGGTACACCCCTGCAGCACCTGGAGACTAAGACTATGCTGCCCATAATCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS GCA 72 bp CAGCATGCCCACTGTAGGCTTGAGACACAGTGTTGCTaGCGGGTTTCCAGGACCCAGGAATCCCAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: QHAHCRLETQCC*RVSRTQESQKV
Trigger: AACCTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTGTCTCAAGCCTACAGTGGGCATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp TCGCTGACAGCTGGTTTTCTGTTCCCTATCCCCCGCTaGTCACAAGGGCACTTCACAACACGCTGCGTATCG +
Preference number: 6 (lower is better)
Translates to: SLTAGFLFPIPR*SQGHFTTRCVS
Trigger: CGATACGCAGCGTGTTGTGAAGTGCCCTTGTGAGCAGCGGGGGATAGGGAACAGAAAACCAGCTGTCAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp AAGTCATTGGATCACAGCCGCTCCGCCCTTCCTTCTTaGACAGCTCCCACTCCCTGCAGGACTACGACAGAA +
Preference number: 6 (lower is better)
Translates to: KSLDHSRSALPS*TAPTPCRTTTE
Trigger: TTCTGTCGTAGTCCTGCAGGGAGTGGGAGCTGTGCAAGAAGGAAGGGCGGAGCGGCTGTGATCCAATGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp GTTCAACCGCAGCCAGGAAGGCAACGTCTGTGCACCTaGAACTTCCCATGGCATTGCCCAACTCAATGGCTC +
Preference number: 6 (lower is better)
Translates to: VQPQPGRQRLCT*NFPWHCPTQWL
Trigger: GAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGGCTGCGGTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp CCAGGAAGGCAACGTCTGTGCACCTGCAACTTCCCATaGCATTGCCCAACTCAATGGCTCAAGAACCTGCCC +
Preference number: 6 (lower is better)
Translates to: PGRQRLCTCNFP*HCPTQWLKNLP
Trigger: GGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 72 bp TCACCAAGAAGTGGGGCTGCCTCTGGCTTCATCGCTTaGGTGCCATCGCTGTCGGGGCTTGTAGCAGATGAA +
Preference number: 6 (lower is better)
Translates to: SPRSGAASGFIA*VPSLSGLVADE
Trigger: TTCATCTGCTACAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CAA 72 bp GAAGCGCCAGCTGACACTGGGTCTATGGGATCTCTTTaGGGGCTCCTGGTTCCTGAGTCCAAAGGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: EAPADTGSMGSL*GLLVPESKGSE
Trigger: CTCAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAGCTGGCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CAA 72 bp GCTGCCGGGTTTCCAGGACCCAGGAATCCCAGAAGGTaGGCAGCAATTGGTATGGTAAGAGCTGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: AAGFPGPRNPRR*AAIGMVRAAGA
Trigger: AGCTCCTGCAGCTCTTACCATACCAATTGCTGCCAACCTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CAA 90 bp GATTTCAGCCTCAGCTCCCCCAGGCAGCCGTACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATGACTTCCTTTTCTTCTGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: DFSLSSPRQPYASVS*PYCPLMTSFSSGAS
Trigger: GCTGGCTCCAGAAGAAAAGGAAGTCATTAAAGGACAGTATGGCAAGCTCACGGACGCGTACGGCTGCCTGGGGGAGCTGAGGCTGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000640338.1
CDS CAA 90 bp CAGTCCGAGCCTTGGGAGGTTGCTGAGGTGCTCCTGGTAGAAGTCTaGCCGTCTGCAAAATTGAATACTGTCCATGGGTGCCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: QSEPWEVAEVLLVEV*PSAKLNTVHGCRRR
Trigger: TCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGCTCGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp GATTTCAGCCTCAGCTCCCCCAGGCAGCCGTACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATGACTTCCTTTTCTTCTGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: DFSLSSPRQPYASVS*PYCPLMTSFSSGAG
Trigger: CCCAGCTCCAGAAGAAAAGGAAGTCATTAAAGGACAGTATGGCAAGCTCACGGACGCGTACGGCTGCCTGGGGGAGCTGAGGCTGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS TCA 72 bp GCCCTGGCTGTTCCCAGAACAGCGGAACGGAGCCTCTaGTCTGGACAAAAGATGACACTCCATCGTCCATGT +
Preference number: 6 (lower is better)
Translates to: ALAVPRTAERSL*SGQKMTLHRPC
Trigger: ACATGGACGATGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGCTGTTCTGGGAACAGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GGGGGTGCGGCATTTGTCGCTTGTATCGTAGGCGGCTaGGCCAACGTCATACTTGTAGGTGGGTCCAAAGTT +
Preference number: 6 (lower is better)
Translates to: GGAAFVACIVGG*ANVILVGGSKV
Trigger: AACTTTGGACCCACCTACAAGTATGACGTTGGCTCAGCCGCCTACGATACAAGCGACAAATGCCGCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GCAGGGAGTTCAGGGTTAGTTTTCCTCTCATTGTGCTaGGAGCAGGCCTGGGTCCTAACTCTCCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: AGSSGLVFLSLC*EQAWVLTLQRC
Trigger: GCACCTCTGGAGAGTTAGGACCCAGGCCTGCTCTCAGCACAATGAGAGGAAAACTAACCCTGAACTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS GCA 72 bp AGGCAACGTCTGTGCACCTGCAACTTCCCATGGCATTaGCCAACTCAATGGCTCAAGAACCTGCCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: RQRLCTCNFPWH*PTQWLKNLPCP
Trigger: AGGACAGGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCACAGACGTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp CGTCCATGTAAATCATCTGCTCTGTCTCCACGAAGTTaGACACATGGCCGTCGTCGTTCACGCCACGGGTGT +
Preference number: 6 (lower is better)
Translates to: RPCKSSALSPRS*THGRRRSRHGC
Trigger: ACACCCGTGGCGTGAACGACGACGGCCATGTGTCCAACTTCGTGGAGACAGAGCAGATGATTTACATGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp TCTCTGCAGCTTTCCCAGGCTGAAATGTTCTTGGTTTaGGAACAGGAGGGACTCGAGGGGCTGTCACGACAG +
Preference number: 6 (lower is better)
Translates to: SLQLSQAEMFLV*EQEGLEGLSRQ
Trigger: CTGTCGTGACAGCCCCTCGAGTCCCTCCTGTTCCCAAACCAAGAACATTTCAGCCTGGGAAAGCTGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CAA 90 bp TTGGCAGCTGAAGCGCCAGCTGACACTGGGTCTATGGGATCTCTTTaGGGGCTCCTGGTTCCTGAGTCCAAAGGGTCTGAGCTCTTAGAA +
Preference number: 6 (lower is better)
Translates to: LAAEAPADTGSMGSL*GLLVPESKGSELLE
Trigger: TTCTAAGAGCTCAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAGCTGGCGCTTCAGCTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CAA 90 bp CACAGTGTTGCTGCCGGGTTTCCAGGACCCAGGAATCCCAGAAGGTaGGCAGCAATTGGTATGGTAAGAGCTGCAGGAGCTGAGAACACT +
Preference number: 6 (lower is better)
Translates to: HSVAAGFPGPRNPRR*AAIGMVRAAGAENT
Trigger: AGTGTTCTCAGCTCCTGCAGCTCTTACCATACCAATTGCTGCCAACCTTCTGGGATTCCTGGGTCCTGGAAACCCGGCAGCAACACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp GATGGCTACGTCCCTTCACCTGCTAACCTAGGACACTaGCAAGCTGCCCAAATAACACAAGCAGAGGGACAG +
Preference number: 6 (lower is better)
Translates to: DGYVPSPANLGH*QAAQITQAEGQ
Trigger: CTGTCCCTCTGCTTGTGTTATTTGGGCAGCTTGGCAGTGTCCTAGGTTAGCAGGTGAAGGGACGTAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS CCA 72 bp TGGAAGTCAAAATTGATCATAGGCGTGTCGCCCGCGTaGCAAGAAGCCCAGAGCAGCTTCTTGAAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WKSKLIIGVSPA*QEAQSSFLKAL
Trigger: CAGAGCCTTCAAGAAGCTGCTCTGGGCTTCTTGCCACGCGGGCGACACGCCTATGATCAATTTTGACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp AGTCAAAGTTTTCCTCCAGCAAACAGGAGTTGGCAGTaGGAGACACGGGGGCCATGCTGTCTCGTTTCCGAA +
Preference number: 6 (lower is better)
Translates to: SQSFPPANRSWQ*ETRGPCCLVSE
Trigger: TTCGGAAACGAGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp GTAGGCCCAGGTGGTAAGATGAGGCCAACCACAAGCTaGGGAAAAGATGAGTTCCTCCAGCATCCAAACACC +
Preference number: 6 (lower is better)
Translates to: VGPGGKMRPTTS*GKDEFLQHPNT
Trigger: GGTGTTTGGATGCTGGAGGAACTCATCTTTTCCCCAGCTTGTGGTTGGCCTCATCTTACCACCTGGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367122.6
CDS CCA 72 bp TGCACCTGCAACTTCCCATGGCATTGCCCAACTCAATaGCTCAAGAACCTGCCCTGTCCTGTAAGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: CTCNFPWHCPTQ*LKNLPCPVSFR
Trigger: CCTGAAGCTTACAGGACAGGGCAGGTTCTTGAGCCATTGAGTTGGGCAATGCCATGGGAAGTTGCAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CAA 72 bp CTCAGCTCCCCCAGGCAGCCGTACGCGTCCGTGAGCTaGCCATACTGTCCTTTAATGACTTCCTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LSSPRQPYASVS*PYCPLMTSFSS
Trigger: AGAAGAAAAGGAAGTCATTAAAGGACAGTATGGCAAGCTCACGGACGCGTACGGCTGCCTGGGGGAGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp CTTGTGAAGTCAAAGTTTTCCTCCAGCAAACAGGAGTaGGCAGTGGGAGACACGGGGGCCATGCTGTCTCGT +
Preference number: 6 (lower is better)
Translates to: LVKSKFSSSKQE*AVGDTGAMLSR
Trigger: ACGAGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp GAGGTGCTCCTGGTAGAAGTCTTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGCCGGAGGAGATGGACG +
Preference number: 6 (lower is better)
Translates to: EVLLVEVLPSAK*NTVHGCRRRWT
Trigger: CGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp GCGTCTCCTGCTCATTCCTGTTCATTCACACCCGGCTaGCCAAGCTGGCTTCCCACCCACTCCAAAAAGAAA +
Preference number: 6 (lower is better)
Translates to: ASPAHSCSFTPG*PSWLPTHSKKK
Trigger: TTTCTTTTTGGAGTGGGTGGGAAGCCAGCTTGGCAAGCCGGGTGTGAATGAACAGGAATGAGCAGGAGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS CAA 90 bp GAGGTTGCTGAGGTGCTCCTGGTAGAAGTCTTGCCGTCTGCAAAATaGAATACTGTCCATGGGTGCCGGAGGAGATGGACGCATCTGAAG +
Preference number: 6 (lower is better)
Translates to: EVAEVLLVEVLPSAK*NTVHGCRRRWTHLK
Trigger: CTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGCACCTCAGCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp TTTGAAGGACTCCACAAAGCGGTCAACGATGGGTTTTaGACTCAGCCCCAGGGTCTTGAGCTGCAGATGCAG +
Preference number: 6 (lower is better)
Translates to: FEGLHKAVNDGF*TQPQGLELQMQ
Trigger: CTGCATCTGCAGCTCAAGACCCTGGGGCTGAGTTCAAAACCCATCGTTGACCGCTTTGTGGAGTCCTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp TGCTCAGGCTGTGGCCATTCAGAGACCACATGGCTTTaGAGGACTCCACAAAGCGGTCAACGATGGGTTTTG +
Preference number: 6 (lower is better)
Translates to: CSGCGHSETTWL*RTPQSGQRWVL
Trigger: CAAAACCCATCGTTGACCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTCTGAATGGCCACAGCCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GGAGAATTGCTTGAATCTGGGAAGCGGAGGTTGCAGTaGGCTGAGATCACACCACTGTACTCCATCCAGCCT +
Preference number: 6 (lower is better)
Translates to: GELLESGKRRLQ*AEITPLYSIQP
Trigger: AGGCTGGATGGAGTACAGTGGTGTGATCTCAGCTCACTGCAACCTCCGCTTCCCAGATTCAAGCAATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp TCCACCAGGTCCGCGTCATCTTTGTACGTTGGATGCTaGTTCTTTTTGGTGAGAGCAGGTGACTTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: STRSASSLYVGC*FFLVRAGDLLG
Trigger: TCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGCGGACCTGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp CGTCTCCTGCTCATTCCTGTTCATTCACACCCGGCTTaGCAAGCTGGCTTCCCACCCACTCCAAAAAGAAAA +
Preference number: 6 (lower is better)
Translates to: RLLLIPVHSHPA*QAGFPPTPKRK
Trigger: TTTTCTTTTTGGAGTGGGTGGGAAGCCAGCTTGGCAAGCCGGGTGTGAATGAACAGGAATGAGCAGGAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS GCA 72 bp AGAAACACATCACAGAAGGCATCAGCGAGCGTCTCCTaGTCATTCCTGTTCATTCACACCCGGCTTGCCAAG +
Preference number: 6 (lower is better)
Translates to: RNTSQKASASVS*SFLFIHTRLAK
Trigger: CTTGGCAAGCCGGGTGTGAATGAACAGGAATGAGCAGGAGACGCTCGCTGATGCCTTCTGTGATGTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS CCA 72 bp CTTCTAAGGTCGGTGATTGAAGGTTTACTACAACAGTaGCATCCAGGGGGCCCTGGAAGGAGGACACTTCCT +
Preference number: 6 (lower is better)
Translates to: LLRSVIEGLLQQ*HPGGPGRRTLP
Trigger: AGGAAGTGTCCTCCTTCCAGGGCCCCCTGGATGCCACTGTTGTAGTAAACCTTCAATCACCGACCTTAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp AGAAGTCTTGCCGTCTGCAAAATTGAATACTGTCCATaGGTGCCGGAGGAGATGGACGCATCTGAAGCCGAC +
Preference number: 6 (lower is better)
Translates to: RSLAVCKIEYCP*VPEEMDASEAD
Trigger: GTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp TCCGCGTCATCTTTGTACGTTGGATGCTGCTTCTTTTaGGTGAGAGCAGGTGACTTGCTGGGAGGAGCCAGT +
Preference number: 6 (lower is better)
Translates to: SASSLYVGCCFF*VRAGDLLGGAS
Trigger: ACTGGCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp ATTCACTTCTGGGGAATCCAAAGCACCAAGGCCAGATaGAAACCTGTGGCTGCCTCAGAAGAAGGAGTTCCC +
Preference number: 6 (lower is better)
Translates to: IHFWGIQSTKAR*KPVAASEEGVP
Trigger: GGGAACTCCTTCTTCTGAGGCAGCCACAGGTTTTCATCTGGCCTTGGTGCTTTGGATTCCCCAGAAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367113.5
CDS GCA 72 bp GTCTTGCCGTCTGCAAAATTGAATACTGTCCATGGGTaGCGGAGGAGATGGACGCATCTGAAGCCGACTTTT +
Preference number: 6 (lower is better)
Translates to: VLPSAKLNTVHG*RRRWTHLKPTF
Trigger: AAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp AGGACTGCAGCCTTCAAAGCTGCTCAGTCATGTTTTTaGCAGTGGGTCAAACACCTGCAGTGCTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: RTAAFKAAQSCF*QWVKHLQCCPL
Trigger: AAGAGGACAGCACTGCAGGTGTTTGACCCACTGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CCA 72 bp GTCGATGGCTACGTCCCTGATGAACGGGACATGGTATaGACGTACAAAGATATAAAGACAGACGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: VDGYVPDERDMV*TYKDIKTDAHQ
Trigger: CTGGTGGGCGTCTGTCTTTATATCTTTGTACGTCCATACCATGTCCCGTTCATCAGGGACGTAGCCATCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GACAGTCAGGTCAAAGCGAGACCCATCGTTTGGCCATaGGAAATAGAACACCCCCGAGCTGAGGATTTTCTT +
Preference number: 6 (lower is better)
Translates to: DSQVKARPIVWP*EIEHPRAEDFL
Trigger: AAGAAAATCCTCAGCTCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCTTTGACCTGACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS TCA 72 bp GCAATCCGGATCCGCTTGAAATTTGTGAATTCGGACTaGCGCTCAGTCATAGCTTTCAGGATCCTGGGAGTC +
Preference number: 6 (lower is better)
Translates to: AIRIRLKFVNSD*RSVIAFRILGV
Trigger: GACTCCCAGGATCCTGAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAATTTCAAGCGGATCCGGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CTCCCCCGAGTTCACTGTCCGAGACTCCAGGCTGATTaGATTCATCCACCAAGTAGTCTTCATCGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: LPRVHCPRLQAD*IHPPSSLHRLQ
Trigger: TTGAAGACGATGAAGACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CCA 72 bp GCTCATTCCTGTTCATTCACACCCGGCTTGCCAAGCTaGCTTCCCACCCACTCCAAAAAGAAAACACAAAGA +
Preference number: 6 (lower is better)
Translates to: AHSCSFTPGLPS*LPTHSKKKTQR
Trigger: TCTTTGTGTTTTCTTTTTGGAGTGGGTGGGAAGCCAGCTTGGCAAGCCGGGTGTGAATGAACAGGAATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638626.1
CDS CAA 72 bp TACTGCAGGGCACCAGGAGACCAGGTGTGTCTGACTTaGGTGTCAACATCTAGATCACTGTCTAGAAGGTTG +
Preference number: 6 (lower is better)
Translates to: YCRAPGDQVCLT*VSTSRSLSRRL
Trigger: CAACCTTCTAGACAGTGATCTAGATGTTGACACCAAAGTCAGACACACCTGGTCTCCTGGTGCCCTGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp CGAATGATCTCCTCTCGCAAACCTTTCAGCCAGTCCTaGGTCTTCGGTCTAATCTTCACTGCTCTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: RMISSRKPFSQS*VFGLIFTALPF
Trigger: GAAAGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 90 bp GTGTGTCTGACTTTGGTGTCAACATCTAGATCACTGTCTAGAAGGTaGAGTTCTCCAGCTACTCGCAGGGGTTCCATTCGAGAGACCCAT +
Preference number: 6 (lower is better)
Translates to: VCLTLVSTSRSLSRR*SSPATRRGSIRETH
Trigger: ATGGGTCTCTCGAATGGAACCCCTGCGAGTAGCTGGAGAACTCAACCTTCTAGACAGTGATCTAGATGTTGACACCAAAGTCAGACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS TCA 72 bp GAACAGCGGAACGGAGCCTCTGATCTGGACAAAAGATaGCACTCCATCGTCCATGTAAATCATCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: EQRNGASDLDKR*HSIVHVNHLLC
Trigger: ACAGAGCAGATGATTTACATGGACGATGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000485863.1
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp TCTGGAAACTCGTTTTTCTCTTCTAAGGTCGGTGATTaGAGGTTTACTACAACAGTGGCATCCAGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SGNSFFSSKVGD*RFTTTVASRGP
Trigger: GGGCCCCCTGGATGCCACTGTTGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CAAGAACAATTGTCCCATAACTCCCCAAGGTCTGCATaGGCTCAGTACGCAGGTCCTCTGGAAACTCGTTTT +
Preference number: 6 (lower is better)
Translates to: QEQLSHNSPRSA*AQYAGPLETRF
Trigger: AAAACGAGTTTCCAGAGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGAGTTATGGGACAATTGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CTTTGGTGTCAACATCTAGATCACTGTCTAGAAGGTTaGGTTCTCCAGCTACTCGCAGGGGTTCCATTCGAG +
Preference number: 6 (lower is better)
Translates to: LWCQHLDHCLEG*VLQLLAGVPFE
Trigger: CTCGAATGGAACCCCTGCGAGTAGCTGGAGAACTCAACCTTCTAGACAGTGATCTAGATGTTGACACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp CTGCTCAGTCATGTTTTTGCCAGTGGGTCAAACACCTaGAGTGCTGTCCTCTTTTCTTGGTCACTGATTGTC +
Preference number: 6 (lower is better)
Translates to: LLSHVFASGSNT*SAVLFSWSLIV
Trigger: GACAATCAGTGACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACTGGCAAAAACATGACTGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
CDS CAA 90 bp TCTCGTTTCCGAATGATCTCCTCTCGCAAACCTTTCAGCCAGTCCTaGGTCTTCGGTCTAATCTTCACTGCTCTGCCTTTCACCTTCATA +
Preference number: 6 (lower is better)
Translates to: SRFRMISSRKPFSQS*VFGLIFTALPFTFI
Trigger: TATGAAGGTGAAAGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp GTCTCCAATTTCTCTAGCTTCCCACCTTTGGCAAACTaGTGGAAGTCAAAATTGATCATAGGCGTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: VSNFSSFPPLAN*WKSKLIIGVSP
Trigger: GGGCGACACGCCTATGATCAATTTTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAGAGAAATTGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CTGTGCCGAAGTCAACAGAATGTATCTATGAGAGCGTaGGATGGCTTTCTGAAGCTGTTCACCCCACATCTT +
Preference number: 6 (lower is better)
Translates to: LCRSQQNVSMRA*DGFLKLFTPHL
Trigger: AAGATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATAGATACATTCTGTTGACTTCGGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CATAATACTGCAGGGCACCAGGAGACCAGGTGTGTCTaGCTTTGGTGTCAACATCTAGATCACTGTCTAGAA +
Preference number: 6 (lower is better)
Translates to: HNTAGHQETRCV*LWCQHLDHCLE
Trigger: TTCTAGACAGTGATCTAGATGTTGACACCAAAGTCAGACACACCTGGTCTCCTGGTGCCCTGCAGTATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS TCA 72 bp CAGGAAGGGATTACCGAGGGTCCGTTACTAGAACACTaGGATCAAACGGAAGATCCAGATGTGTCTACAGAT +
Preference number: 6 (lower is better)
Translates to: QEGITEGPLLEH*DQTEDPDVSTD
Trigger: ATCTGTAGACACATCTGGATCTTCCGTTTGATCTCAGTGTTCTAGTAACGGACCCTCGGTAATCCCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS GCA 72 bp CTGAGATCAAACGGAAGATCCAGATGTGTCTACAGATaGCAGTCTTTGGGCTGCTACTGTCCTTACAAACTC +
Preference number: 6 (lower is better)
Translates to: LRSNGRSRCVYR*QSLGCYCPYKL
Trigger: GAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGACACATCTGGATCTTCCGTTTGATCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS CCA 72 bp GCAAAATTGAATACTGTCCATGGGTGCCGGAGGAGATaGACGCATCTGAAGCCGACTTTTTCACCATTAAAC +
Preference number: 6 (lower is better)
Translates to: AKLNTVHGCRRR*THLKPTFSPLN
Trigger: GTTTAATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp ACTTTGGTGTCAACATCTAGATCACTGTCTAGAAGGTaGAGTTCTCCAGCTACTCGCAGGGGTTCCATTCGA +
Preference number: 6 (lower is better)
Translates to: TLVSTSRSLSRR*SSPATRRGSIR
Trigger: TCGAATGGAACCCCTGCGAGTAGCTGGAGAACTCAACCTTCTAGACAGTGATCTAGATGTTGACACCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS GCA 72 bp AGATCCAGATGTGTCTACAGATGCCAGTCTTTGGGCTaGTACTGTCCTTACAAACTCATGTCTTTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: RSRCVYRCQSLG*YCPYKLMSLKQ
Trigger: CTGCTTCAAAGACATGAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGACACATCTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS GCA 72 bp TCATCTCCCAGCACCACACACACTCGGTTTGCTGAATaGTTCCTAAATAAATTCCTGCCAAATGCTACCAAG +
Preference number: 6 (lower is better)
Translates to: SSPSTTHTRFAE*FLNKFLPNATK
Trigger: CTTGGTAGCATTTGGCAGGAATTTATTTAGGAAGCATTCAGCAAACCGAGTGTGTGTGGTGCTGGGAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640569.1
CDS CCA 72 bp AAAGTCAGTGGCAGTGATTTTGTAGATTTCAGCATCTaGAATTCTGCCCACAGATGTGCAGCCTGTCACCAA +
Preference number: 6 (lower is better)
Translates to: KVSGSDFVDFSI*NSAHRCAACHQ
Trigger: TTGGTGACAGGCTGCACATCTGTGGGCAGAATTCCAGATGCTGAAATCTACAAAATCACTGCCACTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355585.9
ENST00000367113.5
ENST00000449320.2
ENST00000638626.1
ENST00000640338.1
ENST00000640569.1
CDS CCA 72 bp CCGAAGTCAACAGAATGTATCTATGAGAGCGTGAGATaGCTTTCTGAAGCTGTTCACCCCACATCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: PKSTECIYESVR*LSEAVHPTSSC
Trigger: ACAAGAAGATGTGGGGTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATAGATACATTCTGTTGACTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355585.9
ENST00000638626.1
ENST00000640338.1
CDS CAA 72 bp AACGGAAGATCCAGATGTGTCTACAGATGCCAGTCTTaGGGCTGCTACTGTCCTTACAAACTCATGTCTTTG +
Preference number: 6 (lower is better)
Translates to: NGRSRCVYRCQS*GCYCPYKLMSL
Trigger: CAAAGACATGAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGACACATCTGGATCTTCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640338.1
CDS TCA 72 bp CATATAGAATCGAGTCAATATCCAAGAATGCGATCATaGCACTTCCACAATAGAGGTCTGCGCCACGAACCA +
Preference number: 6 (lower is better)
Translates to: HIESSQYPRMRS*HFHNRGLRHEP
Trigger: TGGTTCGTGGCGCAGACCTCTATTGTGGAAGTGTCATGATCGCATTCTTGGATATTGACTCGATTCTATATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS TCA 72 bp CAAGAATATCCCCTTCTGACTCATAGTCCAAACTTGTaGAGTCAAAGTTTTCCTCCAGCAAACAGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: QEYPLLTHSPNL*SQSFPPANRSW
Trigger: CCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCACAAGTTTGGACTATGAGTCAGAAGGGGATATTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355585.9
ENST00000367112.1
ENST00000367122.6
ENST00000638626.1
ENST00000640338.1
CDS GCA 72 bp TTTGTTCCATCATTCTTTGTTCTTTGGTGTATTGTATaGACACAAAATGCACCCCCATGCGCACACACATCC +
Preference number: 6 (lower is better)
Translates to: FVPSFFVLWCIV*TQNAPPCAHTS
Trigger: GGATGTGTGTGCGCATGGGGGTGCATTTTGTGTGCATACAATACACCAAAGAACAAAGAATGATGGAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CAA 90 bp ATTAGTTCTTGGTGGTGGGTCCACAGATATTTGTTCCATCATTCTTaGTTCTTTGGTGTATTGTATGCACACAAAATGCACCCCCATGCG +
Preference number: 6 (lower is better)
Translates to: ISSWWWVHRYLFHHS*FFGVLYAHKMHPHA
Trigger: CGCATGGGGGTGCATTTTGTGTGCATACAATACACCAAAGAACAAAGAATGATGGAACAAATATCTGTGGACCCACCACCAAGAACTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS CCA 72 bp CACCTTGAAGCCAGGCTTCGGATGCTTTGGGGCCTTTaGTTAAAAACATTCCTCGCATATAATTATTCAAAA +
Preference number: 6 (lower is better)
Translates to: HLEARLRMLWGL*LKTFLAYNYSK
Trigger: TTTTGAATAATTATATGCGAGGAATGTTTTTAACCAAAGGCCCCAAAGCATCCGAAGCCTGGCTTCAAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367112.1
CDS TCA 72 bp GATATATTTAGTGGGATACTAGACAGCAGTTACAAATaGATGCACCAGAGCTATAACATCAACACGACTGTA +
Preference number: 6 (lower is better)
Translates to: DIFSGILDSSYK*MHQSYNINTTV
Trigger: TACAGTCGTGTTGATGTTATAGCTCTGGTGCATTCATTTGTAACTGCTGTCTAGTATCCCACTAAATATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367112.1