Pregenerated sensors for SYNGR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000105467Ensembl transcript IDs: ENST00000344846.7, ENST00000595322.1, ENST00000600863.5, ENST00000601610.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCTCAGGGAGAAGACCCTaGCCCTCCCTGCCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGSGRRP*PSLPQP Trigger: GGGCTGTGGCAGGGAGGGGCAGGGTCTTCTCCCTGA...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAAGGCGATGGCTGCCTaGGCACTGCTGCTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGKAMAA*ALLLPR Trigger: CCTGGGGAGCAGCAGTGCCCAGGCAGCCATCGCCTT...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGCGCGTGCTGAAGGCTaGCTTGGGCTGGGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGARAEG*LGLGRS Trigger: TGACCTGCCCAGCCCAAGTCAGCCTTCAGCACGCGC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAGCGGGTGCCGGCAATaGGGGTCTCCTGTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGSGCRQ*GSPVCP Trigger: TGGACACACAGGAGACCCGCATTGCCGGCACCCGCT...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCGGCTGTTGGGGCCAGTaGTGGGCATGTTCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGGCWGQ*WACSQG Trigger: GCCCTGTGAACATGCCCACCACTGGCCCCAACAGCC...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCCCTGAAGCCTGGCCTTaGAGGCCCTGCAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGPEAWP*RPCRVS Trigger: GGAGACTCTGCAGGGCCTCCAAGGCCAGGCTTCAGG...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCCCAGCCCTGAAGCCTaGCCTTGGAGGCCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGPSPEA*PWRPCR Trigger: TCTGCAGGGCCTCCAAGGCCAGGCTTCAGGGCTGGG...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCACCCAGCCCTGAAGCCTaGCCTTGGAGGCCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRAPSPEA*PWRPCR Trigger: TCTGCAGGGCCTCCAAGGCCAGGCTTCAGGGCTGGG...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAGGAGAGGGACTGGGCTaGGGACTGGCCCAGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRAGEGLG*GLAQTR Trigger: CCTTGTCTGGGCCAGTCCCCAGCCCAGTCCCTCTCC...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGCTGGAAGGCTGTCTTaGAGCGGGTGCCGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGAGRLS*SGCRQC Trigger: GCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCACCAGTGCCTCAGGACTaGGTCCCAGCCCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRAPVPQD*VPALKP Trigger: AGGCTTCAGGGCTGGGACTCAGTCCTGAGGCACTGG...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAAGCGGGTGCCGGCAATaGGGGTCTCCTGTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRASGCRQ*GSPVCP Trigger: TGGACACACAGGAGACCCGCATTGCCGGCACCCGCT...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGTGGCTGCCTGGGCACTaGTGCTCCCCAGGAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGWLPGH*CSPGGT Trigger: AGTTCCTCCTGGGGAGCAGCAGTGCCCAGGCAGCCA...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGTGGCCTTGGAGGCCCTaGAGAGTCTCCGCTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGWPWRP*RVSASL Trigger: GAGGGAAGCGGAGACTCTGCAGGGCCTCCAAGGCCA...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGTCAGGGAGAAGACCCTaGCCCTCCCTGCCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGSGRRP*PSLPQP Trigger: GGGCTGTGGCAGGGAGGGGCAGGGTCTTCTCCCTGA...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAGGCTGTTGGGGCCAGTaGTGGGCATGTTCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRAGCWGQ*WACSQG Trigger: GCCCTGTGAACATGCCCACCACTGGCCCCAACAGCC...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCTGGAAGGCTGTCTTaGAGCGGGTGCCGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGAGRLS*SGCRQC Trigger: GCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGC...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCACTGCCTGGGCACTGCTaGTCCCCAGGAGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRALPGHC*SPGGTL Trigger: AAGAGTTCCTCCTGGGGAGCAGCAGTGCCCAGGCAG...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGCTCATGGCTCCCCAGTaGCTCAGGACTGAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGLMAPQ*LRTESQ Trigger: CTGGGACTCAGTCCTGAGGCACTGGGGAGCCATGAG...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGAAGGCTGACTTGGGCTaGGCAGGTCAGGAGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGKADLG*AGQERD Trigger: GTCCCTCTCCTGACCTGCCCAGCCCAAGTCAGCCTT...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGCCACGCTGTTGCTGTTaGGAATGCAGTGGAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGPRCCC*ECSGAA Trigger: CGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGG...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGTTGGGCGGCGAATGCTaGCATTGGTTGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGLGGEC*HWLARK Trigger: CTTCCTGGCCAACCAATGGCAGCATTCGCCGCCCAA...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGTCTTTGGGCGGCGAATaGTGCCATTGGTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGSLGGE*CHWLAR Trigger: CCTGGCCAACCAATGGCAGCATTCGCCGCCCAAAGA...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | CTTTGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGTGAAGGCGATGGCTaGCTGGGCACTGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSGQTGGQGRASITQAVGEGDG*LGTAAP Trigger: GGGAGCAGCAGTGCCCAGGCAGCCATCGCCTTCACC...AACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGTGTTGGGGCCAGTGGTaGGCATGTTCACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGCWGQW*ACSQGC Trigger: ACAGCCCTGTGAACATGCCCACCACTGGCCCCAACA...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCATGTTGGGGCCAGTGGTaGGCATGTTCACAGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRACWGQW*ACSQGC Trigger: ACAGCCCTGTGAACATGCCCACCACTGGCCCCAACA...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGACTGGGCTGGGGACTaGCCCAGACAAGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGDWAGD*PRQGWR Trigger: TCTCCATCCTTGTCTGGGCCAGTCCCCAGCCCAGTC...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR GCA 90 bp | CTTTGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTTGGCCTTGGAGGCCCTaGAGAGTCTCCGCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LWSGQTGGQGRASITQAVWPWRP*RVSASL Trigger: GAGGGAAGCGGAGACTCTGCAGGGCCTCCAAGGCCA...AACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCCTGTTGAGAATGCAGTaGAGCTGCGGAGACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGLLRMQ*SCGDSI Trigger: GATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAG...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCATAACTCAGGCTGTTaGGGCCAGTGGTGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGHNSGC*GQWWAC Trigger: ACATGCCCACCACTGGCCCCAACAGCCTGAGTTATG...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | CTTTGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTCCTGAAGCCTGGCCTTaGAGGCCCTGCAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSGQTGGQGRASITQAVPEAWP*RPCRVS Trigger: GGAGACTCTGCAGGGCCTCCAAGGCCAGGCTTCAGG...AACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGGCCTGGAATATCTGTaGGCAGAAAAGCGCGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGGLEYL*AEKRVL Trigger: CAGCACGCGCTTTTCTGCCCACAGATATTCCAGGCC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGGAATATCAGCCAGGATaGAGTCCAGGAGCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGEYQPG*SPGAGR Trigger: CCTTCCAGCTCCTGGACTTCATCCTGGCTGATATTC...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000595322.1 |
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| CDS-3UTR CCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGMKSRS*KAVLKR Trigger: CCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCAT...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGGCGAATGCTGCCATTaGTTGGCCAGGAAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TQAVGASGGHVHRAVGRGGECCH*LARKQK Trigger: TTTCTGCTTCCTGGCCAACCAATGGCAGCATTCGCC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGCCAGGAGGAACTCTTTaGGCGGCGAATGCTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGPGGTL*AANAAI Trigger: AATGGCAGCATTCGCCGCCCAAAGAGTTCCTCCTGG...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAGCGCTTGTAAGGGACTaGAGCATCATTTCGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SGCWGQWWACSQGCWQRAALVRD*SIISEV Trigger: GACCTCCGAAATGATGCTCCAGTCCCTTACAAGCGC...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGCATAACTCAGGCTGTTaGGGCCAGTGGTGGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGHNSGC*GQWWAC Trigger: ACATGCCCACCACTGGCCCCAACAGCCTGAGTTATG...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR TCA 90 bp | CTTTGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTCCACGCTGTTGCTGTTaGGAATGCAGTGGAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LWSGQTGGQGRASITQAVPRCCC*ECSGAA Trigger: CGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGG...AACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGCTGTTGAGAATGCAGTaGAGCTGCGGAGACTCCATC | + |
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Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGLLRMQ*SCGDSI Trigger: GATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAG...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: WSGQTGGQGRASITQAVGMKSRS*KAVLKR Trigger: CCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCAT...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CCA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGAATGCTGCCATTGGTTaGCCAGGAAGCAGAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: TGGQGRASITQAVGASGGNAAIG*PGSRNP Trigger: TGGGTTTCTGCTTCCTGGCCAACCAATGGCAGCATT...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | CTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCCCCAGGAGGAACTCTTaGGGCGGCGAATGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRLLGPVVGMFTGLLAEGPRRNS*GGECCH Trigger: ATGGCAGCATTCGCCGCCCAAAGAGTTCCTCCTGGG...GCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGTGCTGAAGGCTGACTaGGGCTGGGCAGGTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TQAVGASGGHVHRAVGRGVLKAD*GWAGQE Trigger: CTCCTGACCTGCCCAGCCCAAGTCAGCCTTCAGCAC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | ACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCAGTGGTGGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: TGGQGRASITQAVGASGGSWKAV*KRVPAM Trigger: CATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCT...CCCACCACTGGCCCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | ACTCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGGCCACGCTGTTGCTGTaGAGAATGCAGTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TQAVGASGGHVHRAVGRGATLLL*RMQWSC Trigger: GCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGC...CCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000595322.1 ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: WSGQTGGQGRASITQAVGSWKAV*KRVPAM Trigger: CATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCT...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS TCA 90 bp | GGAAGCCGGCTCCCACGGCAAAGCTGCAGGCCACGCTGTTGCTGTTaGGAATGCAGTGGAGCTGCGGAGACTCCATCTTGTTCTGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: GSRLPRQSCRPRCCC*ECSGAAETPSCSGS Trigger: GCTACCAGAACAAGATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGCCTGCAGCTTTGCCGTGGGAGCCGGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000600863.5 ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | TGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTGGGGCCACGCTGTTGCTGTaGAGAATGCAGTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: WSGQTGGQGRASITQAVGATLLL*RMQWSC Trigger: GCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGC...CCCAACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS-3UTR CAA 90 bp | TCAGGCTGTTGGGGCCAGTGGTGGGCATGTTCACAGGGCTGTTGGCAGAGGGCAGAATGCTGCCATTGGTaGGCCAGGAAGCAGAAACCC | + |
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Preference number: 5 (lower is better) Translates to: SGCWGQWWACSQGCWQRAECCHW*ARKQKP Trigger: GGGTTTCTGCTTCCTGGCCAACCAATGGCAGCATTC...TGCCCTCTGCCAACAGCCCTGTGAACATGCCCACCACTGGCCCCAACAGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS CCA 90 bp | AACCAGACAACTGCCCAGAGAACAGCCAGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGGGTGCCGGCAATGCGGGTCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: NQTTAQRTARMKSRS*KAVLKRVPAMRVSC Trigger: ACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGTTCTCTGGGCAGTTGTCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344846.7 ENST00000600863.5 ENST00000601610.5 |
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| CDS CCA 90 bp | CTGCTGCTCCCCAGGAGGAACTCTTTGGGCGGCGAATGCTGCCATTaGTTGGCCAGGAAGCAGAAACCCATGAACCAGACAACTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLLPRRNSLGGECCH*LARKQKPMNQTTAQ Trigger: CTGGGCAGTTGTCTGGTTCATGGGTTTCTGCTTCCTGGCCAACCAATGGCAGCATTCGCCGCCCAAAGAGTTCCTCCTGGGGAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344846.7 ENST00000601610.5 |
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| CDS CCA 90 bp | ATGCCAGGTAGGCCTGGAATATCAGCCAGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGGGTGCCGGCAATGCGGGTCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: MPGRPGISARMKSRS*KAVLKRVPAMRVSC Trigger: ACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGATATTCCAGGCCTACCTGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595322.1 |
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| CDS-3UTR CAA 90 bp | CTTTGGAGCGGTCAGACAGGGGGACAGGGCAGAGCTAGCATAACTCAGGCTGTTCGGCGAATGCTGCCATaGGTTGGCCAGGAAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LWSGQTGGQGRASITQAVRRMLP*VGQEAE Trigger: TTCTGCTTCCTGGCCAACCAATGGCAGCATTCGCCG...AACAGCCTGAGTTATGCTAGCTCTGCCCTGTCCCCCTGTCTGACCGCTCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS GCA 90 bp | GAAGCGCTTGTAAGGGACTGGAGCATCATTTCGGAGGTCCTGGAATaGCAGGTAGGCCTGGAATATCTGTGGGCAGAAAAGCGCGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: EALVRDWSIISEVLE*QVGLEYLWAEKRVL Trigger: CAGCACGCGCTTTTCTGCCCACAGATATTCCAGGCCTACCTGGCATTCCAGGACCTCCGAAATGATGCTCCAGTCCCTTACAAGCGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS GCA 90 bp | GAAGCGCTTGTAAGGGACTGGAGCATCATTTCGGAGGTCCTGGAATaGCAGGTAGGCCTGGAATATCCAGACAAGGATGGAGAAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: EALVRDWSIISEVLE*QVGLEYPDKDGEEG Trigger: ACCTTCTTCTCCATCCTTGTCTGGATATTCCAGGCCTACCTGGCATTCCAGGACCTCCGAAATGATGCTCCAGTCCCTTACAAGCGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CAA 90 bp | GCCCAGAGAACAGCCAGGATGAAGTCCAGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATGCGGGTCTCCTGTGTGTCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: AQRTARMKSRSWKAV*KRVPAMRVSCVSRT Trigger: CGTCCTGGACACACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGTTCTCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344846.7 ENST00000600863.5 ENST00000601610.5 |
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| CDS CAA 72 bp | AAGCCGGCTCCCACGGCAAAGCTGCAGGCCACGCTGTaGCTGTTGAGAATGCAGTGGAGCTGCGGAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: KPAPTAKLQATL*LLRMQWSCGDS Trigger: GGAGTCTCCGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGCCTGCAGCTTTGCCGTGGGAGCCGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000600863.5 ENST00000601610.5 |
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| CDS TCA 72 bp | GGAATATCTGTGGGCAGAAAAGCGCGTGCTGAAGGCTaGCTTGGGCTGGGCAGGTCAGGAGAGGGACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GISVGRKARAEG*LGLGRSGEGLG Trigger: GCCCAGTCCCTCTCCTGACCTGCCCAGCCCAAGTCAGCCTTCAGCACGCGCTTTTCTGCCCACAGATATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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| CDS CCA 72 bp | ACTGCCCAGAGAACAGCCAGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGGGTGCCGGCAATGCGG | + |
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Preference number: 6 (lower is better) Translates to: TAQRTARMKSRS*KAVLKRVPAMR Trigger: CCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGTTCTCTGGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344846.7 ENST00000600863.5 ENST00000601610.5 |
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| CDS CAA 72 bp | ACAGCCAGGATGAAGTCCAGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATGCGGGTCTCCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TARMKSRSWKAV*KRVPAMRVSCV Trigger: CACACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344846.7 ENST00000600863.5 ENST00000601610.5 |
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| CDS CAA 72 bp | TCAGCCAGGATGAAGTCCAGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATGCGGGTCTCCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SARMKSRSWKAV*KRVPAMRVSCV Trigger: CACACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595322.1 |
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| CDS CAA 90 bp | AAGGCCAGGAAGCCGGCTCCCACGGCAAAGCTGCAGGCCACGCTGTaGCTGTTGAGAATGCAGTGGAGCTGCGGAGACTCCATCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KARKPAPTAKLQATL*LLRMQWSCGDSILF Trigger: GAACAAGATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGCCTGCAGCTTTGCCGTGGGAGCCGGCTTCCTGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000600863.5 ENST00000601610.5 |
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| CDS CAA 90 bp | CCTGGAATATCAGCCAGGATGAAGTCCAGGAGCTGGAAGGCTGTCTaGAAGCGGGTGCCGGCAATGCGGGTCTCCTGTGTGTCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: PGISARMKSRSWKAV*KRVPAMRVSCVSRT Trigger: CGTCCTGGACACACAGGAGACCCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGATATTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595322.1 |
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| CDS GCA 72 bp | AAGACCCGCGTGATGGTCTTGGGCCTTCTCAGAAACTaGACGGCTTCGCTGTTGGCCAGCTCCTGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KTRVMVLGLLRN*TASLLASSWRL Trigger: AAGCCTCCAGGAGCTGGCCAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGACCATCACGCGGGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CCA 72 bp | AGGCCTGGAATATCAGCCAGGATGAAGTCCAGGAGCTaGAAGGCTGTCTTGAAGCGGGTGCCGGCAATGCGG | + |
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Preference number: 6 (lower is better) Translates to: RPGISARMKSRS*KAVLKRVPAMR Trigger: CCGCATTGCCGGCACCCGCTTCAAGACAGCCTTCCAGCTCCTGGACTTCATCCTGGCTGATATTCCAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595322.1 |
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| CDS CAA 72 bp | GCTCCCACGGCAAAGCTGCAGGCCACGCTGTTGCTGTaGAGAATGCAGTGGAGCTGCGGAGACTCCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: APTAKLQATLLL*RMQWSCGDSIL Trigger: CAAGATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGCCTGCAGCTTTGCCGTGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000600863.5 ENST00000601610.5 |
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| CDS CAA 90 bp | CGCGTGATGGTCTTGGGCCTTCTCAGAAACTGCACGGCTTCGCTGTaGGCCAGCTCCTGGAGGCTTTTGGGGATGTGCATGGCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RVMVLGLLRNCTASL*ASSWRLLGMCMAAV Trigger: AACAGCTGCCATGCACATCCCCAAAAGCCTCCAGGAGCTGGCCAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGACCATCACGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CAA 90 bp | AAGACGATCAGGGAGAAGACCCCTTCGAAGACCCGCGTGATGGTCTaGGGCCTTCTCAGAAACTGCACGGCTTCGCTGTTGGCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KTIREKTPSKTRVMV*GLLRNCTASLLASS Trigger: GGAGCTGGCCAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGACCATCACGCGGGTCTTCGAAGGGGTCTTCTCCCTGATCGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CAA 90 bp | CTGCTCCCCAGGAGGAACTCTTTGGGCGGCGAATGCTGCCATTGGTaGGCCAGGAAGCAGAAACCCATGAACCAGACAACTGCCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLPRRNSLGGECCHW*ARKQKPMNQTTAQR Trigger: TCTCTGGGCAGTTGTCTGGTTCATGGGTTTCTGCTTCCTGGCCAACCAATGGCAGCATTCGCCGCCCAAAGAGTTCCTCCTGGGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344846.7 ENST00000601610.5 |
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| CDS TCA 72 bp | CTCCCACGGCAAAGCTGCAGGCCACGCTGTTGCTGTTaGGAATGCAGTGGAGCTGCGGAGACTCCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LPRQSCRPRCCC*ECSGAAETPSC Trigger: ACAAGATGGAGTCTCCGCAGCTCCACTGCATTCTCAACAGCAACAGCGTGGCCTGCAGCTTTGCCGTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000600863.5 ENST00000601610.5 |
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| CDS CCA 72 bp | TCTTGGGCCTTCTCAGAAACTGCACGGCTTCGCTGTTaGCCAGCTCCTGGAGGCTTTTGGGGATGTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SWAFSETARLRC*PAPGGFWGCAW Trigger: CCATGCACATCCCCAAAAGCCTCCAGGAGCTGGCCAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CAA 72 bp | GTCTTGGGCCTTCTCAGAAACTGCACGGCTTCGCTGTaGGCCAGCTCCTGGAGGCTTTTGGGGATGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: VLGLLRNCTASL*ASSWRLLGMCM Trigger: CATGCACATCCCCAAAAGCCTCCAGGAGCTGGCCAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CAA 72 bp | AGGGAGAAGACCCCTTCGAAGACCCGCGTGATGGTCTaGGGCCTTCTCAGAAACTGCACGGCTTCGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: REKTPSKTRVMV*GLLRNCTASLL Trigger: CAACAGCGAAGCCGTGCAGTTTCTGAGAAGGCCCAAGACCATCACGCGGGTCTTCGAAGGGGTCTTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS CCA 72 bp | CATGCCACCCTCATCCAGGAAGCGCTTGTAAGGGACTaGAGCATCATTTCGGAGGTCCTGGAATGCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: HATLIQEALVRD*SIISEVLECQV Trigger: TACCTGGCATTCCAGGACCTCCGAAATGATGCTCCAGTCCCTTACAAGCGCTTCCTGGATGAGGGTGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344846.7 ENST00000595322.1 ENST00000601610.5 |
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| CDS GCA 72 bp | GTAAGGGACTGGAGCATCATTTCGGAGGTCCTGGAATaGCAGGTAGGCCTGGAATATCCAGACAAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: VRDWSIISEVLE*QVGLEYPDKDG Trigger: TCCATCCTTGTCTGGATATTCCAGGCCTACCTGGCATTCCAGGACCTCCGAAATGATGCTCCAGTCCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344846.7 |
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| CDS GCA 72 bp | GTAAGGGACTGGAGCATCATTTCGGAGGTCCTGGAATaGCAGGTAGGCCTGGAATATCTGTGGGCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: VRDWSIISEVLE*QVGLEYLWAEK Trigger: CTTTTCTGCCCACAGATATTCCAGGCCTACCTGGCATTCCAGGACCTCCGAAATGATGCTCCAGTCCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601610.5 |
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