RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNGR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000127561

Ensembl transcript IDs: ENST00000248121.7, ENST00000562045.1, ENST00000563869.1, ENST00000564642.1, ENST00000568896.1, ENST00000618464.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTGGTGGGGTGGCCTTaGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGGGCACCT +
Preference number: 1 (lower is better)
Translates to: REVPETLGPALVGWP*SPGLCLPAASRRAP
Trigger: AGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CCA 90 bp GACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTGGTGGGGTaGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGG +
Preference number: 1 (lower is better)
Translates to: DPREVPETLGPALVG*PWSPGLCLPAASRR
Trigger: CCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR TCA 90 bp TGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: WPRMAQSGHLLCPRH*AGRTQGRSRRPWGL
Trigger: CAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR TCA 90 bp AGGCGGGCACCTGGTACCCTTTGGGGCTGGTGTCCAGGGTCTCGGTaGAGGGCGGGCTCTGGTAGGTCTCGGTGCCCTCCACGCCGCTGC +
Preference number: 1 (lower is better)
Translates to: RRAPGTLWGWCPGSR*RAGSGRSRCPPRRC
Trigger: GCAGCGGCGTGGAGGGCACCGAGACCTACCAGAGCCCGCCCTTCACCGAGACCCTGGACACCAGCCCCAAAGGGTACCAGGTGCCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CCA 90 bp GCTGGAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTaGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTA +
Preference number: 1 (lower is better)
Translates to: AGRTQGRSRRPWGLR*WGGLGALVCACQPL
Trigger: TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTaGAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTG +
Preference number: 1 (lower is better)
Translates to: PDGAKRPPTLSAALS*KDPREVPETLGPAL
Trigger: CAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CCA 90 bp GATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGGTaGCGAAGAGTGACATGTCGGTGCCCAGGCGGAACCGCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: DSRGRPGSPRCSAVR*RRVTCRCPGGTAAG
Trigger: CCCTGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCTTCGCCACCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CCA 90 bp GGAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTA +
Preference number: 1 (lower is better)
Translates to: GRTQGRSRRPWGLRW*GGLGALVCACQPLV
Trigger: TACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR TCA 90 bp TGTGGGGCACGGTGGCCAGCTGGAGCCTCTGGGCCTCTCTCCTGCTaGGGGGCTTGTCTTGCCTGGCACCCAGGCATCCTTCTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: CGARWPAGASGPLSC*GACLAWHPGILLLS
Trigger: GGAGAGGAGAAGGATGCCTGGGTGCCAGGCAAGACAAGCCCCTCAGCAGGAGAGAGGCCCAGAGGCTCCAGCTGGCCACCGTGCCCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR CCA 90 bp GGGCCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTaGGGCACGGTGGCCAGCTGGAGCCTCTGGGCCTCTCTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: GPGSQGKGNHTGAIL*GTVASWSLWASLLL
Trigger: CAGCAGGAGAGAGGCCCAGAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR CCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTaGGCCAGGAAGCAGGGTGCAGGTGGAGAGGCAGGGACTGGGCCA +
Preference number: 1 (lower is better)
Translates to: QCMSSQLCRGTPTWD*ARKQGAGGEAGTGP
Trigger: TGGCCCAGTCCCTGCCTCTCCACCTGCACCCTGCTTCCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR CCA 90 bp CGCACCACCATGACAGAAACGAGACAGTCACTACCCACAGGGACATaGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGT +
Preference number: 1 (lower is better)
Translates to: RTTMTETRQSLPTGT*DGNSGQDPQSWGEG
Trigger: ACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAGTGACTGTCTCGTTTCTGTCATGGTGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CCA 90 bp CACCATGACAGAAACGAGACAGTCACTACCCACAGGGACATGGGATaGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGT +
Preference number: 1 (lower is better)
Translates to: HHDRNETVTTHRDMG*EQWPGSPVLGRGWC
Trigger: ACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAGTGACTGTCTCGTTTCTGTCATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CCA 90 bp CTTCTCCTCTCCTGGCAAGGTCTTACTGAAGGGCTAGGACAGGGCTaGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTGGCCAGAACC +
Preference number: 1 (lower is better)
Translates to: LLLSWQGLTEGLGQG*CLGPQLPCAFLART
Trigger: GGTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTCAGTAAGACCTTGCCAGGAGAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR GCA 90 bp CACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCACTCAACTaGATCTCCAGAGGGAGGTGTCTGTCTGATGAAATGTGGCAACCA +
Preference number: 1 (lower is better)
Translates to: HRIGLGYNVTRLSLN*ISRGRCLSDEMWQP
Trigger: TGGTTGCCACATTTCATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR CCA 90 bp CAGCTCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATaGGACACTGAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: QLSYSLYCKEGAVGT*DTENTQSLVFQERE
Trigger: CTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCCTGGGGCCTGCGTTaGTGGGGTGGCCTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRPWGLR*WGGLGA
Trigger: GGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGG...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR GCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGGCCCTGGTCTGTGCCTaGCAGCCGCTAGTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRALVCA*QPLVGG
Trigger: CCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGC...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGGGGTCCACCCCCTCTTaGCCCCGGATGGCGCAAAGC +
Preference number: 2 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRGSTPS*PRMAQS
Trigger: GCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCC...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR GCA 90 bp GCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGTGCCCTCCACGCCGCTaGCCACCGGATAGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: APDGAKRPPTLSAALSWKCPPRR*PPDSRG
Trigger: ACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCA...CTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR TCA 90 bp GGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTACTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GLRWWGGLGALVCACQPLLCPRH*AGRTQG
Trigger: CCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAG...TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp GCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGAGGTCCCGGAGACCCTaGGGCCTGCGTTGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: APDGAKRPPTLSAALSWKRSRRP*GLRWWG
Trigger: ACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCT...CTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CCA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCTCTTGGCCCCGGATaGCGCAAAGCGGCCACCTAC +
Preference number: 2 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCPLGPG*RKAATY
Trigger: GTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGG...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR TCA 90 bp CACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCATTCGGTGGCGAAGAGTaGCATGTCGGTGCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: HPLLAPDGAKRPPTLSAAFGGEE*HVGAQA
Trigger: CGCCTGGGCACCGACATGTCACTCTTCGCCACCGAA...TGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp CTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGGGCACCTGGTACCCTTTGGGGCTCCTGCGTTGGTGGGGTaGCCTTGGAGCCCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LVCACQPLVGGHLVPFGAPALVG*PWSPGL
Trigger: CAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG...AGCCCCAAAGGGTACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp GGACATGGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GHGMGTVARIPSLGARVVWGLRW*GGLGAL
Trigger: CAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCA...CACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACGGGACTGGGGGAACTTaGCAGGGGCAGCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDGTGGT*QGQPRH
Trigger: GTGTCTGGGCTGCCCCTGCCAAGTTCCCCCAGTCCC...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR GCA 90 bp CCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGAGTGACATGTCGGTaGCCAGGCGGAACCGCTGCA +
Preference number: 2 (lower is better)
Translates to: PALVGWPWSPGLCLPAASRVTCR*PGGTAA
Trigger: TGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCT...ACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp AAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTGGGTCCACCCCCTCTTaGCCCCGGATGGCGCAAAGC +
Preference number: 2 (lower is better)
Translates to: KAATYSVRGTELEGPKGGGSTPS*PRMAQS
Trigger: GCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCC...ACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CAA 90 bp ACTGGGCCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGCTGGAGCCTCTGGGCCTCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: TGPGSQGKGNHTGAI*WGTVASWSLWASLL
Trigger: CAGGAGAGAGGCCCAGAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGGCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp ACATGGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTCGCCCCCGCTTTGTCCTaGGCAGCCCCTGCACCTGAT +
Preference number: 2 (lower is better)
Translates to: TWDGNSGQDPQSWGEGGVAPALS*AAPAPD
Trigger: ATCAGGTGCAGGGGCTGCCCAGGACAAAGCGGGGGC...GACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR TCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGG +
Preference number: 2 (lower is better)
Translates to: PRGESLPQASPFQARDTRLCPRH*AGRTQG
Trigger: CCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAG...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR TCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTTGTCCAGGGTCTCGGTaGAGGGCGGGCTCTGGTAGG +
Preference number: 2 (lower is better)
Translates to: PRGESLPQASPFQARDTRCPGSR*RAGSGR
Trigger: CCTACCAGAGCCCGCCCTTCACCGAGACCCTGGACA...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp CCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCTCATGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: PVHSRLGTHVLGSAIPFSWGLRW*GGLGAL
Trigger: CAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCA...TGAGAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCGGGACTGGGGGAACTTaGCAGGGGCAGCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFGTGGT*QGQPRH
Trigger: GTGTCTGGGCTGCCCCTGCCAAGTTCCCCCAGTCCC...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CCA 90 bp CCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTTGCTCAGCTGTTCGGTaGCGAAGAGTGACATGTCGG +
Preference number: 2 (lower is better)
Translates to: PALVGWPWSPGLCLPAASCSAVR*RRVTCR
Trigger: CCGACATGTCACTCTTCGCCACCGAACAGCTGAGCA...ACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CCA 90 bp CAGCCTGTGAGAGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACATCAGGACCTCAGTCCTaGGGCCAGGTGCTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: QPVRESGEWLRTGRTTMTSGPQS*GQVLRD
Trigger: GTCCCTCAGCACCTGGCCCCAGGACTGAGGTCCTGA...TGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCTCAGGACCTCAGTCCTaGGGCCAGGTGCTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFSGPQS*GQVLRD
Trigger: GTCCCTCAGCACCTGGCCCCAGGACTGAGGTCCTGA...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CCA 90 bp AAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCCTACCCACAGGGACATaGGATGGGAACAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: KGNHTGAILWGTVASWSLLPTGT*DGNSGQ
Trigger: CTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAG...GAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR GCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCACACGTCCTGGGCAGTaGTATCCCCTTCTCAGGACC +
Preference number: 2 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAITRPGQ*YPLLRT
Trigger: GGTCCTGAGAAGGGGATAGCACTGCCCAGGACGTGT...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGACAGGGCTGGTGTCTTaGCCCACAGCTACCTTGTGC +
Preference number: 2 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARTGLVS*PTATLC
Trigger: GCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGT...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR TCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGTGGAGTACTAGGAGGTaGAACCCGAAGACTGGACCA +
Preference number: 2 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARWSTRR*NPKTGP
Trigger: TGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCA...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp CCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGTGAAACCCGAAGACTaGACCATGATCACAACACTG +
Preference number: 2 (lower is better)
Translates to: PGSQGKGNHTGAILWGTVVKPED*TMITTL
Trigger: CAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCAC...CACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp TCCAGAGGGAGGTGTCTGTCTGATGAAATGTGGCAACCACGTTTGGTGTTGACTGGGGCTTGTCTTGCCTaGCACCCAGGCATCCTTCTC +
Preference number: 2 (lower is better)
Translates to: SRGRCLSDEMWQPRLVLTGACLA*HPGILL
Trigger: GAGAAGGATGCCTGGGTGCCAGGCAAGACAAGCCCC...AGTCAACACCAAACGTGGTTGCCACATTTCATCAGACAGACACCTCCCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR GCA 90 bp GTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATGTGGTGTCTTTCCCCTaGCCCCGCTTTGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: VFIVKKVQSEHGTLKIHNVVSFP*PRFVLG
Trigger: GCCCAGGACAAAGCGGGGGCAGGGGAAAGACACCAC...ATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACCCTGCGTTGGTGGGGTaGCCTTGGAGCCCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QSLVFQERERVIYTKIVNPALVG*PWSPGL
Trigger: CAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp TATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGATCGTAGAGGGCAGCTaGACCCCCAACCCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: YCKEGAVGTWDTENTQSLIVEGS*TPNPRV
Trigger: CACTCTGGGGTTGGGGGTCCAGCTGCCCTCTACGAT...CAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATACAGGGGCCATCTTGTaGGGCACGGTGGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: KYTISGLSGEGESDIYKNTGAIL*GTVASW
Trigger: CCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGT...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp GTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATAGAGGGACTCCAACCTaGGACTGGGCCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: VFIVKKVQSEHGTLKIHNRGTPT*DWARKQ
Trigger: CTGCTTCCTGGCCCAGTCCCAGGTTGGAGTCCCTCT...ATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR TCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAACTGGCAAGGTCTTACTaGAGGGCTAGGACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQLARSY*RARTGL
Trigger: CAGCCCTGTCCTAGCCCTTCAGTAAGACCTTGCCAG...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR GCA 90 bp GTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCCCACAGCTACCTTGTaGCTTCCTGGCCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: VFIVKKVQSEHGTLKIHNPTATL*LPGQNH
Trigger: GTGGTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGG...ATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCAACTCCAACCTGGGACTaGGCCAGGAAGCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSTPTWD*ARKQGA
Trigger: TGCACCCTGCTTCCTGGCCCAGTCCCAGGTTGGAGT...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR TCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCACGGGACGCACCACCATaGCAGAAACGAGACAGTCAC +
Preference number: 2 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSRDAPP*QKRDSH
Trigger: GTGACTGTCTCGTTTCTGTCATGGTGGTGCGTCCCG...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAATGGGATGGGAACAGTaGCCAGGATCCCCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQMGWEQ*PGSPVL
Trigger: CAAGACTGGGGATCCTGGCCACTGTTCCCATCCCAT...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CCA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATAGAGGGACTCCAACCTaGGACTGGGCCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: KYTISGLSGEGESDIYKNRGTPT*DWARKQ
Trigger: CTGCTTCCTGGCCCAGTCCCAGGTTGGAGTCCCTCT...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp AATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTCAGGATCCCCAGTCTTaGGGCGAGGGTGGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: NTQSLVFQERERVIYTKIQDPQS*GEGGVF
Trigger: AAAGACACCACCCTCGCCCCAAGACTGGGGATCCTG...AATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CAA 90 bp CTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTaGTCACTCAACTGCATCTCCAGAGGGAGGTGTCTGTCTGATGAA +
Preference number: 2 (lower is better)
Translates to: LKYPHRIGLGYNVTR*SLNCISRGRCLSDE
Trigger: TTCATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp ATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGGCTGTCTGATGAAATGTaGCAACCACGTTTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: IVKKVQSEHGTLKIHNLWLSDEM*QPRLVL
Trigger: CAACACCAAACGTGGTTGCCACATTTCATCAGACAG...CCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR GCA 90 bp TCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACATGAGGTTGTCACTCAACTaGATCTCCAGAGGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: SLVFQERERVIYTKIVNMRLSLN*ISRGRC
Trigger: ACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCT...CATGTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAATATCCACACAGAATTaGTCTAGGCTACAATGTAAC +
Preference number: 2 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQISTQN*SRLQCN
Trigger: GTTACATTGTAGCCTAGACCAATTCTGTGTGGATAT...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CAA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCGGGTCCACCCCCTCTaGGCCCCGGATGGCGCAAAG +
Preference number: 3 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCRVHPL*APDGAK
Trigger: CTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCG...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CCA 72 bp CAAGGGAGGTCCCGGAGACCCTGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: QGRSRRPWGLRW*GGLGALVCACQ
Trigger: CTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CCA 72 bp CCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATaGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACT +
Preference number: 3 (lower is better)
Translates to: PRHAGPPPLGPG*RKAATYSVRGT
Trigger: AGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CAA 90 bp TGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGGGCACCTGGTCGGGTCCACCCCCTCTaGGCCCCGGATGGCGCAAAG +
Preference number: 3 (lower is better)
Translates to: WPWSPGLCLPAASRRAPGRVHPL*APDGAK
Trigger: CTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCG...ACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR TCA 72 bp GCTCGCCCCGGTGCTCAGCTGTTCGGTGGCGAAGAGTaGCATGTCGGTGCCCAGGCGGAACCGCTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: ARPGAQLFGGEE*HVGAQAEPLQG
Trigger: GCCCTGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCTTCGCCACCGAACAGCTGAGCACCGGGGCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR GCA 72 bp GAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGGCCTaGGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: EGPKGGPGDPGA*VGGVALEPWSV
Trigger: CACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR GCA 72 bp CCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTaGCTGCCAGCCGCTAGTAGGCGGGCACCTGGTACC +
Preference number: 3 (lower is better)
Translates to: PALVGWPWSPGL*LPAASRRAPGT
Trigger: GGTACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR GCA 72 bp CCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTaGTCAGCTGTTCGGTGGCGAAGAGTGACATGTCGG +
Preference number: 3 (lower is better)
Translates to: PPDSRGRPGSPR*SAVRWRRVTCR
Trigger: CCGACATGTCACTCTTCGCCACCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CCA 72 bp GCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTaGAAGGACCCAAGGGAGGTCCCGGAGACCCTGGGG +
Preference number: 3 (lower is better)
Translates to: AKRPPTLSAALS*KDPREVPETLG
Trigger: CCCCAGGGTCTCCGGGACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CCA 72 bp GCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTaGCCAGAACCACCCACACCTGGGCAGGGGCCGGGG +
Preference number: 3 (lower is better)
Translates to: AGVLAHSYLVPS*PEPPTPGQGPG
Trigger: CCCCGGCCCCTGCCCAGGTGTGGGTGGTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR TCA 72 bp ATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGGAGGTCCCGGAGACCC +
Preference number: 3 (lower is better)
Translates to: MAQSGHLLCPRH*AGRTQGRSRRP
Trigger: GGGTCTCCGGGACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR TCA 72 bp CCTGGTACCCTTTGGGGCTGGTGTCCAGGGTCTCGGTaGAGGGCGGGCTCTGGTAGGTCTCGGTGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: PGTLWGWCPGSR*RAGSGRSRCPP
Trigger: TGGAGGGCACCGAGACCTACCAGAGCCCGCCCTTCACCGAGACCCTGGACACCAGCCCCAAAGGGTACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR GCA 72 bp CGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTaGCAGCCGCTAGTAGGCGGGCACCTGGTACCCTTT +
Preference number: 3 (lower is better)
Translates to: RWWGGLGALVCA*QPLVGGHLVPF
Trigger: AAAGGGTACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR-3UTR CAA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCACCCTGGGGCCTGCGTaGGTGGGGTGGCCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAITLGPA*VGWPWS
Trigger: GCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGT...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR-3UTR CAA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGCACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARHTGAI*WGTVAS
Trigger: GCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTG...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CAA 90 bp CCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGACAGGGCTGGTGTCTaGGCCCACAGCTACCTTGTG +
Preference number: 3 (lower is better)
Translates to: PGSQGKGNHTGAILWGTVDRAGV*AHSYLV
Trigger: CACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTC...CACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR GCA 72 bp AGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTaGTATCCCCTTCTCAGGACCTCAGTCCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SPFQARDTRPGQ*YPLLRTSVLGP
Trigger: TGGCCCCAGGACTGAGGTCCTGAGAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
3UTR CCA 72 bp ACAGTCACTACCCACAGGGACATGGGATGGGAACAGTaGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: TVTTHRDMGWEQ*PGSPVLGRGWC
Trigger: ACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAGTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CCA 72 bp AGAAACGAGACAGTCACTACCCACAGGGACATGGGATaGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: RNETVTTHRDMG*EQWPGSPVLGR
Trigger: TCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAGTGACTGTCTCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CCA 72 bp TCCTGGCAAGGTCTTACTGAAGGGCTAGGACAGGGCTaGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: SWQGLTEGLGQG*CLGPQLPCAFL
Trigger: CAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTCAGTAAGACCTTGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR TCA 72 bp AAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATaGCAGAAACGAGACAGTCACTACCCACAGGGACAT +
Preference number: 3 (lower is better)
Translates to: KVESGSGRDAPP*QKRDSHYPQGH
Trigger: ATGTCCCTGTGGGTAGTGACTGTCTCGTTTCTGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR CCA 72 bp ATGACAGAAACGAGACAGTCACTACCCACAGGGACATaGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGG +
Preference number: 3 (lower is better)
Translates to: MTETRQSLPTGT*DGNSGQDPQSW
Trigger: CCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAGTGACTGTCTCGTTTCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CAA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAACCCTGGGGCCTGCGTaGGTGGGGTGGCCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQTLGPA*VGWPWS
Trigger: GCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGT...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CAA 90 bp TTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCCCAGGATCCCCAGTCTaGGGGCGAGGGTGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: FIVKKVQSEHGTLKIHNLPGSPV*GRGWCL
Trigger: AAGACACCACCCTCGCCCCAAGACTGGGGATCCTGG...GAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
3UTR-3UTR CAA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATCACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: KYTISGLSGEGESDIYKNHTGAI*WGTVAS
Trigger: GCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTG...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR GCA 72 bp GGTCTAGGCTACAATGTAACAAGGTTGTCACTCAACTaGATCTCCAGAGGGAGGTGTCTGTCTGATGAAATG +
Preference number: 3 (lower is better)
Translates to: GLGYNVTRLSLN*ISRGRCLSDEM
Trigger: CATTTCATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATTGTAGCCTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR-3UTR CAA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATACAATGTAACAAGGTaGTCACTCAACTGCATCTCC +
Preference number: 3 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQYNVTR*SLNCIS
Trigger: GGAGATGCAGTTGAGTGACAACCTTGTTACATTGTA...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
3UTR CCA 72 bp TACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATaGGACACTGAAAATACACAATCTCTGGTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: YSLYCKEGAVGT*DTENTQSLVFQ
Trigger: CTGAAAGACCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp CGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTCCGCGATTCCCAGGCTaGAGCCGGAACGGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: RRCPPDSRGRPGSPRCSAPRFPG*SRNGEG
Trigger: CCCTTCGCCGTTCCGGCTCCAGCCTGGGAATCGCGG...AGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp CGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTACGGCGAAGGGGAGGTaGGAGTGCAGCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRCPPDSRGRPGSPRCSATAKGR*ECSRQS
Trigger: GCTCTGCCTGCTGCACTCTCACCTCCCCTTCGCCGT...AGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp GCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGCCTGCGTTGGTGGGGTaGCCTTGGAGCCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AAAHRIAGVGLARPGAQLPALVG*PWSPGL
Trigger: CAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG...CAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTTGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLGALHAAAHRIAGVGLAWGLRW*GGLGAL
Trigger: CAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCA...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp TGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGGCCCTGGGGCCTGCGTTaGTGGGGTGGCCTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CPPDSRGRPGSPRCSAVRPWGLR*WGGLGA
Trigger: GGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGG...CCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp CGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTTTCGGTGGCGAAGAGTaGCATGTCGGTGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RRCPPDSRGRPGSPRCSAFGGEE*HVGAQA
Trigger: CGCCTGGGCACCGACATGTCACTCTTCGCCACCGAA...AGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp GCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCCCTGGCTCGCCCCGGTaGTCAGCTGTTCGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: AAHRIAGVGLARPGAQLFPGSPR*SAVRWR
Trigger: TCGCCACCGAACAGCTGAGCACCGGGGCGAGCCAGG...GAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTTGCCCTCCACGCCGCTaGCCACCGGATAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCCPPRR*PPDSRG
Trigger: ACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCA...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp GGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTATGGAGAACACCTGCGTaGGGCGCGGCGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLRWWGGLGALVCACQPLWRTPA*GAALRA
Trigger: GGCCCTGAGCGCCGCGCCGCACGCAGGTGTTCTCCA...TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CCCGGAGACCCTGGGGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGAGGTCCCGGAGACCCTaGGGCCTGCGTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGDPGACVGGVALEPWSVRSRRP*GLRWWG
Trigger: ACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCT...CACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp GCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGACAGGAGCCTTCACCTaGGCCCGCGATTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AAAHRIAGVGLARPGAQLTGAFT*ARDSQA
Trigger: AGCCTGGGAATCGCGGGCCCAGGTGAAGGCTCCTGT...CAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp GGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTACACCGCGTGGGCCCGTaGAGTCCCCTCAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLRWWGGLGALVCACQPLHRVGP*SPLRAH
Trigger: GTGGGCTCTGAGGGGACTCCACGGGCCCACGCGGTG...TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTTCACGTAGCCCTCGTTaGCGATGGGCCCGAAGACGG +
Preference number: 4 (lower is better)
Translates to: GLGALHAAAHRIAGVGLASRSPR*RWARRR
Trigger: CCGTCTTCGGGCCCATCGTCAACGAGGGCTACGTGA...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp TGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGGGCACCTGGTTGCCCTCCACGCCGCTaGCCACCGGATAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: WPWSPGLCLPAASRRAPGCPPRR*PPDSRG
Trigger: ACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCA...ACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCGGGACGCGCGCCCCTaGCGCCTTCTGTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDRDARP*RLLSAC
Trigger: ACAGGCGGACAGAAGGCGCCAGGGGCGCGCGTCCCG...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp CCCGGAGACCCTGGGGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGGTACTCTGCACCGCGTaGGCCCGTGGAGTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGDPGACVGGVALEPWSVVLCTA*ARGVPS
Trigger: TGAGGGGACTCCACGGGCCCACGCGGTGCAGAGTAC...CACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp CACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCATGTCCAGGGTCTCGGTaGAGGGCGGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HPLLAPDGAKRPPTLSAACPGSR*RAGSGR
Trigger: CCTACCAGAGCCCGCCCTTCACCGAGACCCTGGACA...TGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp TGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGGTCAGGACCTCAGTCCTaGGGCCAGGTGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: CPPDSRGRPGSPRCSAVRSGPQS*GQVLRD
Trigger: GTCCCTCAGCACCTGGCCCCAGGACTGAGGTCCTGA...CCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTGCTGCCACTGATTGGTaGGGAAGCAGAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GLGALHAAAHRIAGVGLAAATDW*GSRSPR
Trigger: TCGTGGGCTTCTGCTTCCTCACCAATCAGTGGCAGC...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGGACGCTGCTGATTTaGTGGAAGCGCACATCGAGC +
Preference number: 4 (lower is better)
Translates to: GLGALHAAAHRIAGVGLARTLLI*WKRTSS
Trigger: GCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCG...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp TTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGTCTGGTAGGTCTCGGTaGCCTCCACGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LAPDGAKRPPTLSAALSWSGRSR*PPRRCP
Trigger: TGGGCAGCGGCGTGGAGGGCACCGAGACCTACCAGA...CCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGGACGGGCACAGCTCATaGAGTGCTGGGACAGACATG +
Preference number: 4 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRDGHSS*SAGTDM
Trigger: CATGTCTGTCCCAGCACTGCATGAGCTGTGCCCGTC...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp AAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCTCCCTGGGGCCTGCGTTaGTGGGGTGGCCTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KGTTQGPSCGARWPAGASPWGLR*WGGLGA
Trigger: GGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGG...AGAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACGGGTCCACCCCCTCTTaGCCCCGGATGGCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDGSTPS*PRMAQS
Trigger: GCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCC...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp TTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGGGGACTGGGGGAACTTaGCAGGGGCAGCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LAPDGAKRPPTLSAALSWGTGGT*QGQPRH
Trigger: GTGTCTGGGCTGCCCCTGCCAAGTTCCCCCAGTCCC...CCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTGGTCGCGGACGCTGCTaGTTTGCTGGAAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCGRGRC*FAGSAH
Trigger: ATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACC...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDLCPRH*AGRTQG
Trigger: CCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAG...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTGCACAGCTCATGCAGTaGTGGGACAGACATGTCCAC +
Preference number: 4 (lower is better)
Translates to: GLGALHAAAHRIAGVGLAAQLMQ*WDRHVH
Trigger: GTGGACATGTCTGTCCCAGCACTGCATGAGCTGTGC...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp TGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGGGGAGCTGTTGCTTCCTaGGCGGTTGGGAACTGTCTG +
Preference number: 4 (lower is better)
Translates to: CPPDSRGRPGSPRCSAVRGAVAS*AVGNCL
Trigger: CAGACAGTTCCCAACCGCGCAGGAAGCAACAGCTCC...CCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCAGCACCTGGTACCCTTTaGGGCTGGTGTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HPLLAPDGAKRPPTLSAAAPGTL*GWCPGS
Trigger: AGACCCTGGACACCAGCCCCAAAGGGTACCAGGTGC...TGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp GGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGCACCTGGTACCCTTTaGGGCTGGTGTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLRWWGGLGALVCACQPLAPGTL*GWCPGS
Trigger: AGACCCTGGACACCAGCCCCAAAGGGTACCAGGTGC...TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCTGCGTTGGTGGGGTaGCCTTGGAGCCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDPALVG*PWSPGL
Trigger: CAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp GGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGCCTCTTGGCCCCGGATaGCGCAAAGCGGCCACCTAC +
Preference number: 4 (lower is better)
Translates to: GAKRPPTLSAALSWKDPRPLGPG*RKAATY
Trigger: GTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGG...CCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp AAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTCGGGTCCACCCCCTCTTaGCCCCGGATGGCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KRPPTLSAALSWKDPREVGSTPS*PRMAQS
Trigger: GCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCC...GACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp GGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGCCCGAAGACGGCGATaGAGAACACCTGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GAKRPPTLSAALSWKDPRARRRR*RTPACG
Trigger: GCCGCACGCAGGTGTTCTCCATCGCCGTCTTCGGGC...CCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCCGCCCGCGTTCCCGTTaGACACGCAGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFRPRSR*TRSAAR
Trigger: CCGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCG...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp CACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCAGAAGGACCAGAGTCCTaGGAAGCCCAGGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HPLLAPDGAKRPPTLSAAEGPES*EAQVQQ
Trigger: TTGCTGGACCTGGGCTTCTCAGGACTCTGGTCCTTC...TGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp CACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGGCAAGGTCTTACTaGAGGGCTAGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPLLAPDGAKRPPTLSAALARSY*RARTGL
Trigger: CAGCCCTGTCCTAGCCCTTCAGTAAGACCTTGCCAG...TGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp CTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGTCCACCCAGCTTCCTaGACGTGGTGGGTACCCGAG +
Preference number: 4 (lower is better)
Translates to: LRWWGGLGALVCACQPLVVHPAS*TWWVPE
Trigger: CTCGGGTACCCACCACGTGCAGGAAGCTGGGTGGAC...TACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp TTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGGGGCTAGGACAGGGCTaGTGTCTTGGCCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: LAPDGAKRPPTLSAALSWGLGQG*CLGPQL
Trigger: TAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCC...CCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp TGCCAGCCGCTAGTAGGCGGGCACCTGGTACCCTTTGGGGCTGGTGTCCAGGGTAGGCCCGTATCTGGGTaGGGGGCGGTGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: CQPLVGGHLVPFGAGVQGRPVSG*GAVSPL
Trigger: AAGAGGTGACACCGCCCCCCACCCAGATACGGGCCT...ACCCTGGACACCAGCCCCAAAGGGTACCAGGTGCCCGCCTACTAGCGGCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
3UTR CAA 72 bp GGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGCTGGAGCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSQGKGNHTGAI*WGTVASWSLWA
Trigger: GGCCCAGAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp TTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGGAAGGACCAGAGTCCTaGGAAGCCCAGGTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LAPDGAKRPPTLSAALSWEGPES*EAQVQQ
Trigger: TTGCTGGACCTGGGCTTCTCAGGACTCTGGTCCTTC...CCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp CTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTAGCCGTGCGCTGCCACTaGTTGGTGAGGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRWWGGLGALVCACQPLVAVRCH*LVRKQK
Trigger: CTTCTGCTTCCTCACCAATCAGTGGCAGCGCACGGC...TACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCAGGCGGAACCGCTaGAGGGCCTTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAIPRRNR*RAFTVS
Trigger: GCTCACCGTGAAGGCCCTGCAGCGGTTCCGCCTGGG...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp CCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGCCTGGCTCGCCCCGGTaGTCAGCTGTTCGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PGSQGKGNHTGAILWGTVPGSPR*SAVRWR
Trigger: TCGCCACCGAACAGCTGAGCACCGGGGCGAGCCAGG...CACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTGCCCTGGTCTGTGCCTaGCAGCCGCTAGTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRGESLPQASPFQARDTRALVCA*QPLVGG
Trigger: CCCGCCTACTAGCGGCTGGCAGGCACAGACCAGGGC...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCGCGATGGAGAACACCTaGGTGCGGCGCGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFAMENT*VRRGAQ
Trigger: CTGAGCGCCGCGCCGCACGCAGGTGTTCTCCATCGC...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGCGGGACGCGCGCCCCTaGCGCCTTCTGTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARRDARP*RLLSAC
Trigger: ACAGGCGGACAGAAGGCGCCAGGGGCGCGCGTCCCG...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTATGCTCAGCTGTTCGGTaGCGAAGAGTGACATGTCGG +
Preference number: 4 (lower is better)
Translates to: GLRWWGGLGALVCACQPLCSAVR*RRVTCR
Trigger: CCGACATGTCACTCTTCGCCACCGAACAGCTGAGCA...TAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCTGGGGCCTGCGTTGGTaGGGTGGCCTTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAIWGLRW*GGLGAL
Trigger: CAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCA...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCAGGTCCCGGAGACCCTaGGGCCTGCGTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAIRSRRP*GLRWWG
Trigger: ACCCCACCAACGCAGGCCCCAGGGTCTCCGGGACCT...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp ATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTCTTTCCCCGCCCCCGCTTTGTCCTaGGCAGCCCCTGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: MGTVARIPSLGARVVSFPAPALS*AAPAPD
Trigger: ATCAGGTGCAGGGGCTGCCCAGGACAAAGCGGGGGC...GGGGAAAGACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp GGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGTGGGACCCCAACAGGTaGAGTGACTTGTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: GAKRPPTLSAALSWKDPRWDPNR*SDLSGI
Trigger: GATCCCGGACAAGTCACTTCACCTGTTGGGGTCCCA...CCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp GGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGACACGTCCTGGGCAGTaGTATCCCCTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GAKRPPTLSAALSWKDPRTRPGQ*YPLLRT
Trigger: GGTCCTGAGAAGGGGATAGCACTGCCCAGGACGTGT...CCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp AAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCGGGCTAGGACAGGGCTaGTGTCTTGGCCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: KGNHTGAILWGTVASWSLGLGQG*CLGPQL
Trigger: TAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCC...GAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTGACAGGGGCCATCTTGTaGGGCACGGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGLGQGWCLGPQLPCAFLTGAIL*GTVASW
Trigger: CCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGT...CAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTCAGAGGGACTCCAACCTaGGACTGGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KRPPTLSAALSWKDPREVRGTPT*DWARKQ
Trigger: CTGCTTCCTGGCCCAGTCCCAGGTTGGAGTCCCTCT...GACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp CGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTTCACCTGTAAGTGTTTaGGCTGAAAAGATGACACCG +
Preference number: 4 (lower is better)
Translates to: RRCPPDSRGRPGSPRCSASPVSV*AEKMTP
Trigger: CGGTGTCATCTTTTCAGCCCAAACACTTACAGGTGA...AGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp GCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGCCCACTCAAGAGTGTaGGAACAGGAGCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: APDGAKRPPTLSAALSWKAHSRV*EQEPSP
Trigger: AGGTGAAGGCTCCTGTTCCCACACTCTTGAGTGGGC...CTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp GAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTGTCACGTAGCCCTCGTTaGCGATGGGCCCGAAGACGG +
Preference number: 4 (lower is better)
Translates to: EGLGQGWCLGPQLPCAFLSRSPR*RWARRR
Trigger: CCGTCTTCGGGCCCATCGTCAACGAGGGCTACGTGA...CAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp CCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTGACACCGTTGACCTCTaGGGTTCCGTCAAACCTCAA +
Preference number: 4 (lower is better)
Translates to: PALVGWPWSPGLCLPAASDTVDL*GSVKPQ
Trigger: TTGAGGTTTGACGGAACCTCAGAGGTCAACGGTGTC...ACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCAGCCCCCACGTGACTaGTTATTAATATCACCTGTA +
Preference number: 4 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRQPPRD*LLISPV
Trigger: TACAGGTGATATTAATAATCAGTCACGTGGGGGCTG...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCTGGAGCCCTGGTCTGTaGCTGCCAGCCGCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAIWSPGL*LPAASR
Trigger: CCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCA...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR GCA 90 bp CAGCCTGTGAGAGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACAGTGGTGTCTTTCCCCTaGCCCCGCTTTGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPVRESGEWLRTGRTTMTVVSFP*PRFVLG
Trigger: GCCCAGGACAAAGCGGGGGCAGGGGAAAGACACCAC...TGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp AAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCCAGGATCCCCAGTCTTaGGGCGAGGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KGNHTGAILWGTVASWSLQDPQS*GEGGVF
Trigger: AAAGACACCACCCTCGCCCCAAGACTGGGGATCCTG...GAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GGACATGGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGACAGGGCTGGTGTCTTaGCCCACAGCTACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GHGMGTVARIPSLGARVVTGLVS*PTATLC
Trigger: GCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGT...CACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp ATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTCTTTCCCCACTCCAACCTGGGACTaGGCCAGGAAGCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: MGTVARIPSLGARVVSFPTPTWD*ARKQGA
Trigger: TGCACCCTGCTTCCTGGCCCAGTCCCAGGTTGGAGT...GGGGAAAGACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp CCGGATGGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCAGCTCATGCAGTGCTaGGACAGACATGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PDGAKRPPTLSAALSWKDQLMQC*DRHVHP
Trigger: TGGGTGGACATGTCTGTCCCAGCACTGCATGAGCTG...GTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCCATCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp AGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACAGAAACGAGACATGTCCAGGGTCTCGGTaGAGGGCGGGCTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RKWRVAPDGTHHHDRNETCPGSR*RAGSGR
Trigger: CCTACCAGAGCCCGCCCTTCACCGAGACCCTGGACA...TGTCTCGTTTCTGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp CCCGGAGACCCTGGGGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGATGACAGCCCCCACGTaGCTGATTATTAATATCACC +
Preference number: 4 (lower is better)
Translates to: PGDPGACVGGVALEPWSVMTAPT*LIINIT
Trigger: GGTGATATTAATAATCAGTCACGTGGGGGCTGTCAT...CACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp AAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTCAGCATGCAAATAGGGTaGCGGGCACAGCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: KRPPTLSAALSWKDPREVSMQIG*RAQLMQ
Trigger: CTGCATGAGCTGTGCCCGTCACCCTATTTGCATGCT...GACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp CAGCCTGTGAGAGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACAAGAGTGACATGTCGGTaGCCAGGCGGAACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPVRESGEWLRTGRTTMTRVTCR*PGGTAA
Trigger: TGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCT...TGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTAGGCAGCGGAGCTGTTaGTTCCTGCGCGGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRGESLPQASPFQARDTRRQRSC*FLRGWE
Trigger: TTCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCT...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp CCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCTCATCAGGACCTCAGTCCTaGGGCCAGGTGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PVHSRLGTHVLGSAIPFSSGPQS*GQVLRD
Trigger: GTCCCTCAGCACCTGGCCCCAGGACTGAGGTCCTGA...TGAGAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CCA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTCTCAGAAAGTCCCCGTaGGATCGCCATTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCLRKSP*DRHCSY
Trigger: ATAAGAACAATGGCGATCCCACGGGGACTTTCTGAG...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp AGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACAGAAACGAGACATCACGTAGCCCTCGTTaGCGATGGGCCCGAAGACGG +
Preference number: 4 (lower is better)
Translates to: RKWRVAPDGTHHHDRNETSRSPR*RWARRR
Trigger: CCGTCTTCGGGCCCATCGTCAACGAGGGCTACGTGA...TGTCTCGTTTCTGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCGCTGCCACTGATTGGTaGGGAAGCAGAAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFAATDW*GSRSPR
Trigger: TCGTGGGCTTCTGCTTCCTCACCAATCAGTGGCAGC...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR TCA 90 bp GAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACAGGGCTGGGCTGTCTCTGTCCGCGGCACTaGGCTGGAAGGACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EVKPEDWTMITTLTGLGCLCPRH*AGRTQG
Trigger: CCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAG...ACAGCCCAGCCCTGTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp GGACATGGGATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTGTTCTAGCAGCCTGTaGGAGAAAGTGGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GHGMGTVARIPSLGARVVCSSSL*EKVESG
Trigger: GCCACTCTCCACTTTCTCTCACAGGCTGCTAGAACA...CACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATCCCATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp GAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACAGGGCTGGGCTGTGGGCCTCTCTCCTGCTaGGGGGCTTGTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EVKPEDWTMITTLTGLGCGPLSC*GACLAW
Trigger: CCAGGCAAGACAAGCCCCTCAGCAGGAGAGAGGCCC...ACAGCCCAGCCCTGTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp GAGACCCTGGGGCCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGTGTAAGTGTTTGGGCTaGAAAGATGACACCGTTGAC +
Preference number: 4 (lower is better)
Translates to: ETLGPALVGWPWSPGLCLCKCLG*KDDTVD
Trigger: GTCAACGGTGTCATCTTTTCAGCCCAAACACTTACA...CAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp GAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTGCCCACAGCTACCTTGTaGCTTCCTGGCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: EGLGQGWCLGPQLPCAFLPTATL*LPGQNH
Trigger: GTGGTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGG...CAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCAACCTCAATGCCTCCTaGCCACCAGTTCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFNLNAS*PPVPGD
Trigger: GTCTCCCGGAACTGGTGGGCAGGAGGCATTGAGGTT...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR GCA 90 bp GCAGCTTGTGGAGTACTAGGAGGTGAAACCCGAAGACTGGACCATGATCACAACCCCAGGCGGAACCGCTaGAGGGCCTTCACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: AACGVLGGETRRLDHDHNPRRNR*RAFTVS
Trigger: GCTCACCGTGAAGGCCCTGCAGCGGTTCCGCCTGGG...GTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCACAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp GCCAGCTTTGAGCAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGTCTTGTGGGGCACGGTaGCCAGCTGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASFEQCMSSQLCRGTPTWSCGAR*PAGASG
Trigger: CCCAGAGGCTCCAGCTGGCCACCGTGCCCCACAAGA...CCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTGCTCAAAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GGCAGCCCAGACACGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGATATCCACACAGAATTaGTCTAGGCTACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: GSPDTRVHPLLAPDGAKRISTQN*SRLQCN
Trigger: GTTACATTGTAGCCTAGACCAATTCTGTGTGGATAT...CCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCGTGTCTGGGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTTGCTTCCTGCGCGGTTaGGAACTGTCTGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRGESLPQASPFQARDTRCFLRG*ELSGLF
Trigger: AAACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCA...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR TCA 90 bp CCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGTGGAGTACTAGGAGGTaGAACCCGAAGACTGGACCA +
Preference number: 4 (lower is better)
Translates to: PGSQGKGNHTGAILWGTVWSTRR*NPKTGP
Trigger: TGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCA...CACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp AAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTCAACAGCCACTTTACATaGGTCCCCTCACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: KRPPTLSAALSWKDPREVNSHFT*VPSPNP
Trigger: AGGATTTGGTGAGGGGACGCATGTAAAGTGGCTGTT...GACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp GAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACAGGGCTGGGCTGTGCCTGTGAGAGAAAGTaGAGAGTGGCTCCGGACGGG +
Preference number: 4 (lower is better)
Translates to: EVKPEDWTMITTLTGLGCACERK*RVAPDG
Trigger: CCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGC...ACAGCCCAGCCCTGTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGAGGTATCCTTCTCCTCTCCTaGCAAGGTCTTACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KAATYSVRGTELEGPKGGILLLS*QGLTEG
Trigger: CCCTTCAGTAAGACCTTGCCAGGAGAGGAGAAGGAT...ACCTCCCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp GAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACAGGGCTGGGCTGTCGGGACGCACCACCATaGCAGAAACGAGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: EVKPEDWTMITTLTGLGCRDAPP*QKRDSH
Trigger: GTGACTGTCTCGTTTCTGTCATGGTGGTGCGTCCCG...ACAGCCCAGCCCTGTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCAGGTTGTCACTCAACTaGATCTCCAGAGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFRLSLN*ISRGRC
Trigger: ACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCT...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp GCCAGCTTTGAGCAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGGGGCTTGTCTTGCCTaGCACCCAGGCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASFEQCMSSQLCRGTPTWGACLA*HPGILL
Trigger: GAGAAGGATGCCTGGGTGCCAGGCAAGACAAGCCCC...CCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTGCTCAAAGCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp GCAGCTTGTGGAGTACTAGGAGGTGAAACCCGAAGACTGGACCATGATCACAACGGTCGCGGACGCTGCTaGTTTGCTGGAAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: AACGVLGGETRRLDHDHNGRGRC*FAGSAH
Trigger: ATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACC...GTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCACAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGTGTTCTAGCAGCCTGTaGGAGAAAGTGGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARCSSSL*EKVESG
Trigger: GCCACTCTCCACTTTCTCTCACAGGCTGCTAGAACA...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp CCAGGAAGCCAAGGTAAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCTTTGAGCAATGCATaGGTAGTCAGCTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGSQGKGNHTGAILWGTVALSNA*VVSYAE
Trigger: CTCTGCATAGCTGACTACTCATGCATTGCTCAAAGC...CACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTTACCTTGGCTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp GCCAGCTTTGAGCAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGACACGTCCTGGGCAGTaGTATCCCCTTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: ASFEQCMSSQLCRGTPTWTRPGQ*YPLLRT
Trigger: GGTCCTGAGAAGGGGATAGCACTGCCCAGGACGTGT...CCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTGCTCAAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp CAGCCTGTGAGAGAAAGTGGAGAGTGGCTCCGGACGGGACGCACCACCATGACAGCCAGCTTTGAGCAATaGATGAGTAGTCAGCTATGC +
Preference number: 4 (lower is better)
Translates to: QPVRESGEWLRTGRTTMTASFEQ*MSSQLC
Trigger: GCATAGCTGACTACTCATGCATTGCTCAAAGCTGGC...TGTCATGGTGGTGCGTCCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp TTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCGTGAAACCCGAAGACTaGACCATGATCACAACACTG +
Preference number: 4 (lower is better)
Translates to: FPRPVHSRLGTHVLGSAIVKPED*TMITTL
Trigger: CAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCAC...GATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp GATGGGAACAGTGGCCAGGATCCCCAGTCTTGGGGCGAGGGTGGTGTCTTTCCCCTGTCTGATGAAATGTaGCAACCACGTTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DGNSGQDPQSWGEGGVFPLSDEM*QPRLVL
Trigger: CAACACCAAACGTGGTTGCCACATTTCATCAGACAG...GGGAAAGACACCACCCTCGCCCCAAGACTGGGGATCCTGGCCACTGTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp GGCGCAAAGCGGCCACCTACTCTGTCCGCGGCACTGAGCTGGAAGGACCCAAGGGTATTTAGTAATTATTaGCAACACGGGCCGTTTAGT +
Preference number: 4 (lower is better)
Translates to: GAKRPPTLSAALSWKDPRVFSNY*QHGPFS
Trigger: ACTAAACGGCCCGTGTTGTCAATAATTACTAAATAC...CCTTGGGTCCTTCCAGCTCAGTGCCGCGGACAGAGTAGGTGGCCGCTTTGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp TCCAGAGGGAGGTGTCTGTCTGATGAAATGTGGCAACCACGTTTGGTGTTGACTATCGTAGAGGGCAGCTaGACCCCCAACCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SRGRCLSDEMWQPRLVLTIVEGS*TPNPRV
Trigger: CACTCTGGGGTTGGGGGTCCAGCTGCCCTCTACGAT...AGTCAACACCAAACGTGGTTGCCACATTTCATCAGACAGACACCTCCCTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp AAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCAAAATACACAATCTCTaGTCTTTCAGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGNHTGAILWGTVASWSLKIHNL*SFRRGR
Trigger: TCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTT...GAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp AATGTAACAAGGTTGTCACTCAACTGCATCTCCAGAGGGAGGTGTCTGTCTGATTTCGGTGGCGAAGAGTaGCATGTCGGTGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NVTRLSLNCISRGRCLSDFGGEE*HVGAQA
Trigger: CGCCTGGGCACCGACATGTCACTCTTCGCCACCGAA...ATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGGCTTTGAGCAATGCATaGGTAGTCAGCTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARALSNA*VVSYAE
Trigger: CTCTGCATAGCTGACTACTCATGCATTGCTCAAAGC...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp CTTACTGAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCCGGAACATGGGACACTaGAAATACACAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTEGLGQGWCLGPQLPCARNMGH*KYTISG
Trigger: ACCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCG...GGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTCAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp CCAAGAGGGGAAAGCCTTCCCCAGGCCAGTCCATTCCAGGCTAGGGACACACGTAGTGAGCATCTACTATaGCCAGACATTGTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PRGESLPQASPFQARDTRSEHLL*PDIVLN
Trigger: GTTTAACACAATGTCTGGGCATAGTAGATGCTCACT...ACGTGTGTCCCTAGCCTGGAATGGACTGGCCTGGGGAAGGCTTTCCCCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CCA 90 bp TCCAGAGGGAGGTGTCTGTCTGATGAAATGTGGCAACCACGTTTGGTGTTGACTATGGGATGGGAACAGTaGCCAGGATCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRGRCLSDEMWQPRLVLTMGWEQ*PGSPVL
Trigger: CAAGACTGGGGATCCTGGCCACTGTTCCCATCCCAT...AGTCAACACCAAACGTGGTTGCCACATTTCATCAGACAGACACCTCCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGCTGTCTGATGAAATGTaGCAACCACGTTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARLSDEM*QPRLVL
Trigger: CAACACCAAACGTGGTTGCCACATTTCATCAGACAG...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACCGCCCGCGTTCCCGTTaGACACGCAGCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QSLVFQERERVIYTKIVNRPRSR*TRSAAR
Trigger: CCGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCG...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp AATGTAACAAGGTTGTCACTCAACTGCATCTCCAGAGGGAGGTGTCTGTCTGATCGGGACGCACCACCATaGCAGAAACGAGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: NVTRLSLNCISRGRCLSDRDAPP*QKRDSH
Trigger: GTGACTGTCTCGTTTCTGTCATGGTGGTGCGTCCCG...ATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp ATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGGGCCCGAAGACGGCGATaGAGAACACCCAGGACGCGA +
Preference number: 4 (lower is better)
Translates to: IVKKVQSEHGTLKIHNLWARRRR*RTPRTR
Trigger: TCGCGTCCTGGGTGTTCTCCATCGCCGTCTTCGGGC...CCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAGCCCGAAGACGGCGATaGAGAACACCCAGGACGCGA +
Preference number: 4 (lower is better)
Translates to: SVTVFIVKKVQSEHGTLKARRRR*RTPRTR
Trigger: TCGCGTCCTGGGTGTTCTCCATCGCCGTCTTCGGGC...TTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AATGTAACAAGGTTGTCACTCAACTGCATCTCCAGAGGGAGGTGTCTGTCTGATTGCTCAGCTGTTCGGTaGCGAAGAGTGACATGTCGG +
Preference number: 4 (lower is better)
Translates to: NVTRLSLNCISRGRCLSDCSAVR*RRVTCR
Trigger: CCGACATGTCACTCTTCGCCACCGAACAGCTGAGCA...ATCAGACAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp GTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATGGGACTGGGGGAACTTaGCAGGGGCAGCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: VFIVKKVQSEHGTLKIHNGTGGT*QGQPRH
Trigger: GTGTCTGGGCTGCCCCTGCCAAGTTCCCCCAGTCCC...ATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp TCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACATGGGGCCTCTCTCCTGCTaGGGGGCTTGTCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVFQERERVIYTKIVNMGPLSC*GACLAW
Trigger: CCAGGCAAGACAAGCCCCTCAGCAGGAGAGAGGCCC...CATGTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAATCTGGTAGGTCTCGGTaGCCTCCACGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKSGRSR*PPRRCP
Trigger: TGGGCAGCGGCGTGGAGGGCACCGAGACCTACCAGA...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp TTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGGAGCCCTGGTCTGTaGCTGCCAGCCGCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: FIVKKVQSEHGTLKIHNLWSPGL*LPAASR
Trigger: CCTACTAGCGGCTGGCAGGCACAGACCAGGGCTCCA...GAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAGCCAGCTGGAGCCTCTaGGCCTCTCTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKASWSL*ASLLLR
Trigger: CCTCAGCAGGAGAGAGGCCCAGAGGCTCCAGCTGGC...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCAGCCAGCTGGAGCCTCTaGGCCTCTCTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSASWSL*ASLLLR
Trigger: CCTCAGCAGGAGAGAGGCCCAGAGGCTCCAGCTGGC...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCATCTTGTGGGGCACGGTaGCCAGCTGGAGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSSCGAR*PAGASG
Trigger: CCCAGAGGCTCCAGCTGGCCACCGTGCCCCACAAGA...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCAACAGGGGCCATCTTGTaGGGCACGGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSTGAIL*GTVASW
Trigger: CCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGT...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGACTCCAACCTGGGACTaGGCCAGGAAGCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: YCKEGAVGTWDTENTQSLTPTWD*ARKQGA
Trigger: TGCACCCTGCTTCCTGGCCCAGTCCCAGGTTGGAGT...CAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCACTCAACCTGCCCCCGCTTTGCTaGAAGCGCACATCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KYPHRIGLGYNVTRLSLNLPPLC*KRTSSS
Trigger: GCTGCTCGATGTGCGCTTCCAGCAAAGCGGGGGCAG...GTTGAGTGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618464.1
3UTR CAA 72 bp CCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTaGTCACTCAACTGCATCTCCAGAGGGAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PHRIGLGYNVTR*SLNCISRGRCL
Trigger: CAGACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAACTACCCACAGGGACATaGGATGGGAACAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVTVFIVKKVQSEHGTLKLPTGT*DGNSGQ
Trigger: CTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAG...TTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAGGGGCTTGTCTTGCCTaGCACCCAGGCATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQGACLA*HPGILL
Trigger: GAGAAGGATGCCTGGGTGCCAGGCAAGACAAGCCCC...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAAGAGGGACTCCAACCTaGGACTGGGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQRGTPT*DWARKQ
Trigger: CTGCTTCCTGGCCCAGTCCCAGGTTGGAGTCCCTCT...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAGCCGTGCGCTGCCACTaGTTGGTGAGGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKAVRCH*LVRKQK
Trigger: CTTCTGCTTCCTCACCAATCAGTGGCAGCGCACGGC...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR TCA 90 bp AAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCACTCAACCTGGCAAGGTCTTACTaGAGGGCTAGGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KYPHRIGLGYNVTRLSLNLARSY*RARTGL
Trigger: CAGCCCTGTCCTAGCCCTTCAGTAAGACCTTGCCAG...GTTGAGTGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp TTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCCCCACAGCTACCTTGTaGCTTCCTGGCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: FIVKKVQSEHGTLKIHNLPTATL*LPGQNH
Trigger: GTGGTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGG...GAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAGCCTGTGAGAGAAAGTaGAGAGTGGCTCCGGACGGG +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKACERK*RVAPDG
Trigger: CCCGTCCGGAGCCACTCTCCACTTTCTCTCACAGGC...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp TATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGTGGAGTACTAGGAGGTaGAACCCGAAGACTGGACCA +
Preference number: 4 (lower is better)
Translates to: YCKEGAVGTWDTENTQSLWSTRR*NPKTGP
Trigger: TGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCA...CAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACCGGACGCTGCTGATTTaGTGGAAGCGCACATCGAGC +
Preference number: 4 (lower is better)
Translates to: QSLVFQERERVIYTKIVNRTLLI*WKRTSS
Trigger: GCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCG...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR GCA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATGTGGTGTCTTTCCCCTaGCCCCGCTTTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KYTISGLSGEGESDIYKNVVSFP*PRFAGS
Trigger: GCTTCCAGCAAAGCGGGGGCAGGGGAAAGACACCAC...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618464.1
CDS-3UTR CCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAACAGGATCCCCAGTCTTaGGGCGAGGGTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKQDPQS*GEGGVF
Trigger: AAAGACACCACCCTCGCCCCAAGACTGGGGATCCTG...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp GAAAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAACTACCCACAGGGACATaGGATGGGAACAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ENTQSLVFQERERVIYTKLPTGT*DGNSGQ
Trigger: CTGGCCACTGTTCCCATCCCATGTCCCTGTGGGTAG...TTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACACGCTGCTGATTTGCTaGAAGCGCACATCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSLVFQERERVIYTKIVNTLLIC*KRTSSS
Trigger: GCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGT...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCAATGGGATGGGAACAGTaGCCAGGATCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSMGWEQ*PGSPVL
Trigger: CAAGACTGGGGATCCTGGCCACTGTTCCCATCCCAT...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATACAGGGCTGGTGTCTTaGCCCACAGCTACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KYTISGLSGEGESDIYKNTGLVS*PTATLC
Trigger: GCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGT...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATCCTTCTCCTCTCCTaGCAAGGTCTTACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVTVFIVKKVQSEHGTLKILLLS*QGLTEG
Trigger: CCCTTCAGTAAGACCTTGCCAGGAGAGGAGAAGGAT...TTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp TCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAGTGAAACCCGAAGACTaGACCATGATCACAACACTG +
Preference number: 4 (lower is better)
Translates to: SVTVFIVKKVQSEHGTLKVKPED*TMITTL
Trigger: CAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCAC...TTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp TATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGGGTGTTGACTTAATGTaGAAAGCCAGCTTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: YCKEGAVGTWDTENTQSLGVDLM*KASFEQ
Trigger: TTGCTCAAAGCTGGCTTTTCACATTAAGTCAACACC...CAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACGCCAGCTTTGAGCAATaGATGAGTAGTCAGCTATGC +
Preference number: 4 (lower is better)
Translates to: QSLVFQERERVIYTKIVNASFEQ*MSSQLC
Trigger: GCATAGCTGACTACTCATGCATTGCTCAAAGCTGGC...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR GCA 90 bp AATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTAGGTTGTCACTCAACTaGATCTCCAGAGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: NTQSLVFQERERVIYTKIRLSLN*ISRGRC
Trigger: ACACCTCCCTCTGGAGATGCAGTTGAGTGACAACCT...AATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAGGTGTTGACTTAATGTaGAAAGCCAGCTTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQGVDLM*KASFEQ
Trigger: TTGCTCAAAGCTGGCTTTTCACATTAAGTCAACACC...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR TCA 90 bp TCACTTAAATATCCACACAGAATTGGTCTAGGCTACAATGTAACAAGGTTGTCACGGAACATGGGACACTaGAAATACACAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKYPHRIGLGYNVTRLSRNMGH*KYTISG
Trigger: ACCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCG...TGACAACCTTGTTACATTGTAGCCTAGACCAATTCTGTGTGGATATTTAAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp CAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTGTAAACAAAATACACAATCTCTaGTCTTTCAGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSLVFQERERVIYTKIVNKIHNL*SFRRGR
Trigger: TCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTTT...GTTTACAATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CCA 90 bp AATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATTATATCCACACAGAATTaGTCTAGGCTACAATGTAAC +
Preference number: 4 (lower is better)
Translates to: NTQSLVFQERERVIYTKIISTQN*SRLQCN
Trigger: GTTACATTGTAGCCTAGACCAATTCTGTGTGGATAT...AATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS CCA 90 bp CACGCGGTGGCCCACGGCGGCCTCGCCCGGAGGAGGAAAGGTCGGTaGGCCCGAGGCTTGGGGCGCCTCGCCTGGGCTCGCCGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: HAVAHGGLARRRKGR*ARGLGRLAWARRVA
Trigger: CGCCACGCGGCGAGCCCAGGCGAGGCGCCCCAAGCCTCGGGCCCACCGACCTTTCCTCCTCCGGGCGAGGCCGCCGTGGGCCACCGCGTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS CCA 90 bp ACGGCGGCCTCGCCCGGAGGAGGAAAGGTCGGTGGGCCCGAGGCTTaGGGCGCCTCGCCTGGGCTCGCCGCGTGGCGCGAGGTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: TAASPGGGKVGGPEA*GASPGLAAWREVPP
Trigger: AGGCGGGACCTCGCGCCACGCGGCGAGCCCAGGCGAGGCGCCCCAAGCCTCGGGCCCACCGACCTTTCCTCCTCCGGGCGAGGCCGCCGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS GCA 90 bp GACGGCGATGGAGAACACCTGCGTGCGGCGCGGCGCTCAGGGCCCTaGGGCGACCCGACCTCTGCGAGCCCGCCTCGAGCGCCCACGCCC +
Preference number: 5 (lower is better)
Translates to: DGDGEHLRAARRSGP*GDPTSASPPRAPTP
Trigger: GGGCGTGGGCGCTCGAGGCGGGCTCGCAGAGGTCGGGTCGCCGCAGGGCCCTGAGCGCCGCGCCGCACGCAGGTGTTCTCCATCGCCGTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 90 bp GAGTCCTGCGAACAGTGCGGCGCGTCAGGGCGACGCTCCACGCGGTaGCCCACGGCGGCCTCGCCCGGAGGAGGAAAGGTCGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ESCEQCGASGRRSTR*PTAASPGGGKVGGP
Trigger: GGGCCCACCGACCTTTCCTCCTCCGGGCGAGGCCGCCGTGGGCCACCGCGTGGAGCGTCGCCCTGACGCGCCGCACTGTTCGCAGGACTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS TCA 90 bp CGAGGCCCAGCGCGACGCCGAAGCGGCAGGCGCCCGCGTTCCCGTTaGACACGCAGCGCAGCTCGGGGCCGCTGTCGGTGTTCACGTAGC +
Preference number: 5 (lower is better)
Translates to: RGPARRRSGRRPRSR*TRSAARGRCRCSRS
Trigger: GCTACGTGAACACCGACAGCGGCCCCGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGCCTGCCGCTTCGGCGTCGCGCTGGGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
ENST00000618464.1
CDS TCA 90 bp TGGGCCCGCGATTCCCAGGCTGGAGCCGGAACGGCGAAGGGGAGGTaGGAGTGCAGCAGGCAGAGCGGGGCGGGAGGGAGGGTATGGAGG +
Preference number: 5 (lower is better)
Translates to: WARDSQAGAGTAKGR*ECSRQSGAGGRVWR
Trigger: CCTCCATACCCTCCCTCCCGCCCCGCTCTGCCTGCTGCACTCTCACCTCCCCTTCGCCGTTCCGGCTCCAGCCTGGGAATCGCGGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp GGTCTCGGTGCCCTCCACGCCGCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTGAGGCAGCGGAGCTGTaGCTTCCTGCGCGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GLGALHAAAHRIAGVGLAEAAEL*LPARLG
Trigger: TCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCTC...AGCCAGGCCTACCCCGGCTATCCGGTGGGCAGCGGCGTGGAGGGCACCGAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 90 bp AGCCCAGGTCCAGCAACACCGCGCGCCGGCGGTCGCGGACGCTGCTaGTTTGCTGGAAGCGCACATCGAGCAGCAGGAAGGCGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SPGPATPRAGGRGRC*FAGSAHRAAGRRRR
Trigger: CCTGCGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTTGCTGGACCTGGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS GCA 90 bp AGGTCCAGCAACACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTTaGTGGAAGCGCACATCGAGCAGCAGGAAGGCGGCGCAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RSSNTARRRSRTLLI*WKRTSSSRKAAQAR
Trigger: CCTCGCCTGCGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTTGCTGGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS CCA 90 bp TCCAGCAACACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTTGCTaGAAGCGCACATCGAGCAGCAGGAAGGCGGCGCAGGCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSNTARRRSRTLLIC*KRTSSSRKAAQARK
Trigger: CTTCCTCGCCTGCGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTTGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS-3UTR CAA 90 bp CTGGTCTGTGCCTGCCAGCCGCTAGTAGGCGGGCACCTGGTACCCTTTGGGGCTACCCTGGGGCCTGCGTaGGTGGGGTGGCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LVCACQPLVGGHLVPFGATLGPA*VGWPWS
Trigger: GCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGT...AGCCCCAAAGGGTACCAGGTGCCCGCCTACTAGCGGCTGGCAGGCACAGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp CTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTACGGGTCCACCCCCTCTaGGCCCCGGATGGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: LRWWGGLGALVCACQPLVRVHPL*APDGAK
Trigger: CTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCG...TACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 90 bp GTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGGTGGCGAAGAGTaGCATGTCGGTGCCCAGGCGGAACCGCTGCAGGGCCTTCACGGT +
Preference number: 5 (lower is better)
Translates to: VGLARPGAQLFGGEE*HVGAQAEPLQGLHG
Trigger: ACCGTGAAGGCCCTGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCTTCGCCACCGAACAGCTGAGCACCGGGGCGAGCCAGGCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000564642.1
CDS CCA 90 bp CACCGCGTGGGCCCGTGGAGTCCCCTCAGAGCCCACTCAAGAGTGTaGGAACAGGAGCCTTCACCTGGGCCCGCGATTCCCAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HRVGPWSPLRAHSRV*EQEPSPGPAIPRLE
Trigger: CTCCAGCCTGGGAATCGCGGGCCCAGGTGAAGGCTCCTGTTCCCACACTCTTGAGTGGGCTCTGAGGGGACTCCACGGGCCCACGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp GCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCGCGGACGCTGCTGATTaGCTGGAAGCGCACATCGAG +
Preference number: 5 (lower is better)
Translates to: AAHRIAGVGLARPGAQLFADAAD*LEAHIE
Trigger: CTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGC...GAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp CGCGGGTCCACCCCCTCTTGGCCCCGGATGGCGCAAAGCGGCCACCTACTCTGTGCGGACGCTGCTGATTaGCTGGAAGCGCACATCGAG +
Preference number: 5 (lower is better)
Translates to: RGSTPSWPRMAQSGHLLCADAAD*LEAHIE
Trigger: CTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGC...ACAGAGTAGGTGGCCGCTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CAA 90 bp GCTGCCCACCGGATAGCCGGGGTAGGCCTGGCTCGCCCCGGTGCTCAGCTGTTCTTGCTTCCTGCGCGGTaGGGAACTGTCTGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: AAHRIAGVGLARPGAQLFLLPAR*GTVWPV
Trigger: AACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCAA...GAACAGCTGAGCACCGGGGCGAGCCAGGCCTACCCCGGCTATCCGGTGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 90 bp CCACGCCCCTGGGCCTGTCCCTGCGTTCCCAGGCCCGTATCTGGGTaGGGGGCGGTGTCACCTCTTTCTTTCCCGAACCCTCGCGTATTT +
Preference number: 5 (lower is better)
Translates to: PRPWACPCVPRPVSG*GAVSPLSFPNPRVF
Trigger: AAATACGCGAGGGTTCGGGAAAGAAAGAGGTGACACCGCCCCCCACCCAGATACGGGCCTGGGAACGCAGGGACAGGCCCAGGGGCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp AGGCCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCCGGGTCCACCCCCTCTaGGCCCCGGATGGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: RPVHSRLGTHVLGSAIPFRVHPL*APDGAK
Trigger: CTTTGCGCCATCCGGGGCCAAGAGGGGGTGGACCCG...GAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CAA 90 bp CCAGTCCATTCCAGGCTAGGGACACACGTCCTGGGCAGTGCTATCCCCTTCTCAGCGCCCGCGTTCCCGTaGAACACGCAGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PVHSRLGTHVLGSAIPFSAPAFP*NTQRSS
Trigger: CGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGC...TGAGAAGGGGATAGCACTGCCCAGGACGTGTGTCCCTAGCCTGGAATGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000562045.1
CDS-3UTR CAA 90 bp CAATGCATGAGTAGTCAGCTATGCAGAGGGACTCCAACCTGGGACTGGGCCAGGGCGCCCGCGTTCCCGTaGAACACGCAGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QCMSSQLCRGTPTWDWARAPAFP*NTQRSS
Trigger: CGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGC...CCTGGCCCAGTCCCAGGTTGGAGTCCCTCTGCATAGCTGACTACTCATGCATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp AAAGGGAACCACACAGGGGCCATCTTGTGGGGCACGGTGGCCAGCTGGAGCCTCTGGCCCACAGCTACCTaGTGCCTTCCTGGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: KGNHTGAILWGTVASWSLWPTAT*CLPGQN
Trigger: GTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGGCCA...GAGGCTCCAGCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTGGTTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp GAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTTCCTGCCAGGATCCCCAGTCTaGGGGCGAGGGTGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: EGLGQGWCLGPQLPCAFLPGSPV*GRGWCL
Trigger: AAGACACCACCCTCGCCCCAAGACTGGGGATCCTGG...CAGGAAGGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp CCTGCGTTGGTGGGGTGGCCTTGGAGCCCTGGTCTGTGCCTGCCAGCCGCTAGTGAAAAGATGACACCGTaGACCTCTGAGGTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: PALVGWPWSPGLCLPAASEKMTP*TSEVPS
Trigger: TGACGGAACCTCAGAGGTCAACGGTGTCATCTTTTC...ACTAGCGGCTGGCAGGCACAGACCAGGGCTCCAAGGCCACCCCACCAACGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp CTTACTGAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTGGCCCACAGCTACCTaGTGCCTTCCTGGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: LTEGLGQGWCLGPQLPCAWPTAT*CLPGQN
Trigger: GTTCTGGCCAGGAAGGCACAAGGTAGCTGTGGGCCA...GGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTCAGTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS GCA 90 bp ATGACACCGTTGACCTCTGAGGTTCCGTCAAACCTCAATGCCTCCTaGCCACCAGTTCCGGGAGACAGGCATGAGGGGGACCGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: MTPLTSEVPSNLNAS*PPVPGDRHEGDRSH
Trigger: ATGACTGCGGTCCCCCTCATGCCTGTCTCCCGGAACTGGTGGGCAGGAGGCATTGAGGTTTGACGGAACCTCAGAGGTCAACGGTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp GCAGCTTGTGGAGTACTAGGAGGTGAAACCCGAAGACTGGACCATGATCACAACCACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AACGVLGGETRRLDHDHNHTGAI*WGTVAS
Trigger: GCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTG...GTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCACAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS TCA 90 bp CGCGGTTGGGAACTGTCTGGCCTGTTTTCTAGCATGCAAATAGGGTaGCGGGCACAGCTCATGCAGTGCTGGGACAGACATGTCCACCCA +
Preference number: 5 (lower is better)
Translates to: RGWELSGLFSSMQIG*RAQLMQCWDRHVHP
Trigger: TGGGTGGACATGTCTGTCCCAGCACTGCATGAGCTGTGCCCGTCACCCTATTTGCATGCTAGAAAACAGGCCAGACAGTTCCCAACCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp TGTGGAGTACTAGGAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACTCCCCTGCCCCCGCTTaGCTGGAAGCGCACATCGAG +
Preference number: 5 (lower is better)
Translates to: CGVLGGETRRLDHDHNTDSPAPA*LEAHIE
Trigger: CTCGATGTGCGCTTCCAGCAAAGCGGGGGCAGGGGA...GTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618464.1
CDS-3UTR CAA 90 bp ATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTGGACCCTGGGGCCTGCGTaGGTGGGGTGGCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: IVKKVQSEHGTLKIHNLWTLGPA*VGWPWS
Trigger: GCTCCAAGGCCACCCCACCAACGCAGGCCCCAGGGT...CCAGAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000248121.7
CDS-3UTR CAA 90 bp TGTGGAGTACTAGGAGGTGAAACCCGAAGACTGGACCATGATCACAACACTGACGACAGGGCTGGTGTCTaGGCCCACAGCTACCTTGTG +
Preference number: 5 (lower is better)
Translates to: CGVLGGETRRLDHDHNTDDRAGV*AHSYLV
Trigger: CACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTC...GTCAGTGTTGTGATCATGGTCCAGTCTTCGGGTTTCACCTCCTAGTACTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp AGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAAGCGCCCGCGTTCCCGTaGAACACGCAGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SLYCKEGAVGTWDTENTQAPAFP*NTQRSS
Trigger: CGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGC...TTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp TCAGTTACAGTCTTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAACACACAGGGGCCATCTaGTGGGGCACGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SVTVFIVKKVQSEHGTLKHTGAI*WGTVAS
Trigger: GCTGGCCACCGTGCCCCACAAGATGGCCCCTGTGTG...TTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAAGACTGTAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp CTTACTGAAGGGCTAGGACAGGGCTGGTGTCTTGGCCCACAGCTACCTTGTGCCTACAATGTAACAAGGTaGTCACTCAACTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: LTEGLGQGWCLGPQLPCAYNVTR*SLNCIS
Trigger: GGAGATGCAGTTGAGTGACAACCTTGTTACATTGTA...GGCACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTCCTAGCCCTTCAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS GCA 90 bp GAGCATCTACTATGCCCAGACATTGTGTTAAACAGCCACTTTACATaGGTCCCCTCACCAAATCCTCAGAAAGTCCCCGTGGGATCGCCA +
Preference number: 5 (lower is better)
Translates to: EHLLCPDIVLNSHFT*VPSPNPQKVPVGSP
Trigger: TGGCGATCCCACGGGGACTTTCTGAGGATTTGGTGAGGGGACGCATGTAAAGTGGCTGTTTAACACAATGTCTGGGCATAGTAGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS-3UTR CAA 90 bp AAATACACAATCTCTGGTCTTTCAGGAGAGGGAGAGAGTGATATATACAAAAATGACAGGGCTGGTGTCTaGGCCCACAGCTACCTTGTG +
Preference number: 5 (lower is better)
Translates to: KYTISGLSGEGESDIYKNDRAGV*AHSYLV
Trigger: CACAAGGTAGCTGTGGGCCAAGACACCAGCCCTGTC...ATTTTTGTATATATCACTCTCTCCCTCTCCTGAAAGACCAGAGATTGTGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS-3UTR CAA 90 bp TTTATTGTAAAGAAGGTGCAGTCGGAACATGGGACACTGAAAATACACAATCTCTACAATGTAACAAGGTaGTCACTCAACTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: FIVKKVQSEHGTLKIHNLYNVTR*SLNCIS
Trigger: GGAGATGCAGTTGAGTGACAACCTTGTTACATTGTA...GAGATTGTGTATTTTCAGTGTCCCATGTTCCGACTGCACCTTCTTTACAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248121.7
ENST00000618464.1
CDS CAA 90 bp CACGGCGGCCTCGCCCGGAGGAGGAAAGGTCGGTGGGCCCGAGGCTaGGGGCGCCTCGCCTGGGCTCGCCGCGTGGCGCGAGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: HGGLARRRKGRWARG*GRLAWARRVARGPA
Trigger: GGCGGGACCTCGCGCCACGCGGCGAGCCCAGGCGAGGCGCCCCAAGCCTCGGGCCCACCGACCTTTCCTCCTCCGGGCGAGGCCGCCGTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS GCA 72 bp GGAGAACACCTGCGTGCGGCGCGGCGCTCAGGGCCCTaGGGCGACCCGACCTCTGCGAGCCCGCCTCGAGCG +
Preference number: 6 (lower is better)
Translates to: GEHLRAARRSGP*GDPTSASPPRA
Trigger: CGCTCGAGGCGGGCTCGCAGAGGTCGGGTCGCCGCAGGGCCCTGAGCGCCGCGCCGCACGCAGGTGTTCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 72 bp GCGCGACGCCGAAGCGGCAGGCGCCCGCGTTCCCGTTaGACACGCAGCGCAGCTCGGGGCCGCTGTCGGTGT +
Preference number: 6 (lower is better)
Translates to: ARRRSGRRPRSR*TRSAARGRCRC
Trigger: ACACCGACAGCGGCCCCGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGCCTGCCGCTTCGGCGTCGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
ENST00000618464.1
CDS GCA 72 bp CGATGGGCCCGAAGACGGCGATGGAGAACACCTGCGTaGGGCGCGGCGCTCAGGGCCCTGCGGCGACCCGAC +
Preference number: 6 (lower is better)
Translates to: RWARRRRWRTPA*GAALRALRRPD
Trigger: GTCGGGTCGCCGCAGGGCCCTGAGCGCCGCGCCGCACGCAGGTGTTCTCCATCGCCGTCTTCGGGCCCATCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp GAACAGTGCGGCGCGTCAGGGCGACGCTCCACGCGGTaGCCCACGGCGGCCTCGCCCGGAGGAGGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: EQCGASGRRSTR*PTAASPGGGKV
Trigger: GACCTTTCCTCCTCCGGGCGAGGCCGCCGTGGGCCACCGCGTGGAGCGTCGCCCTGACGCGCCGCACTGTTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS CAA 72 bp AGCGCGACGCCGAAGCGGCAGGCGCCCGCGTTCCCGTaGAACACGCAGCGCAGCTCGGGGCCGCTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: SATPKRQAPAFP*NTQRSSGPLSV
Trigger: CACCGACAGCGGCCCCGAGCTGCGCTGCGTGTTCAACGGGAACGCGGGCGCCTGCCGCTTCGGCGTCGCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
ENST00000618464.1
CDS GCA 72 bp TTGACGATGGGCCCGAAGACGGCGATGGAGAACACCTaGGTGCGGCGCGGCGCTCAGGGCCCTGCGGCGACC +
Preference number: 6 (lower is better)
Translates to: LTMGPKTAMENT*VRRGAQGPAAT
Trigger: GGTCGCCGCAGGGCCCTGAGCGCCGCGCCGCACGCAGGTGTTCTCCATCGCCGTCTTCGGGCCCATCGTCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp ACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTTGCTaGAAGCGCACATCGAGCAGCAGGAAGGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: TARRRSRTLLIC*KRTSSSRKAAQ
Trigger: CTGCGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS CAA 90 bp CAGGTCCAGCAACACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTaGCTGGAAGCGCACATCGAGCAGCAGGAAGGCGGCGCAGGCGAG +
Preference number: 6 (lower is better)
Translates to: QVQQHRAPAVADAAD*LEAHIEQQEGGAGE
Trigger: CTCGCCTGCGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTTGCTGGACCTG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS GCA 72 bp AACACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTTaGTGGAAGCGCACATCGAGCAGCAGGAAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: NTARRRSRTLLI*WKRTSSSRKAA
Trigger: CGCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS GCA 72 bp CACGAACCACAGGAAGGACCAGAGTCCTGCGAACAGTaGGGCGCGTCAGGGCGACGCTCCACGCGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: HEPQEGPESCEQ*GASGRRSTRWP
Trigger: GGGCCACCGCGTGGAGCGTCGCCCTGACGCGCCGCACTGTTCGCAGGACTCTGGTCCTTCCTGTGGTTCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564642.1
CDS CAA 72 bp CAACACCGCGCGCCGGCGGTCGCGGACGCTGCTGATTaGCTGGAAGCGCACATCGAGCAGCAGGAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: QHRAPAVADAAD*LEAHIEQQEGG
Trigger: GCCGCCTTCCTGCTGCTCGATGTGCGCTTCCAGCAAATCAGCAGCGTCCGCGACCGCCGGCGCGCGGTGTTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000568896.1
CDS GCA 72 bp GCGAAGAGTGACATGTCGGTGCCCAGGCGGAACCGCTaGAGGGCCTTCACGGTGAGCGCCACCCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: AKSDMSVPRRNR*RAFTVSATQLR
Trigger: CCTCAGCTGGGTGGCGCTCACCGTGAAGGCCCTGCAGCGGTTCCGCCTGGGCACCGACATGTCACTCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248121.7
ENST00000562045.1
ENST00000563869.1
ENST00000564642.1
CDS CCA 72 bp GGCGATGGAGAACACCTGCCTGCCCCGGTCCCGAGATaGAGACCATCCTCAGGAACCCACCAGCCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GDGEHLPAPVPR*RPSSGTHQPGP
Trigger: GGGACCTGGCTGGTGGGTTCCTGAGGATGGTCTCCATCTCGGGACCGGGGCAGGCAGGTGTTCTCCATCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563869.1
CDS CCA 72 bp GGCCCGTGGAGTCCCCTCAGAGCCCACTCAAGAGTGTaGGAACAGGAGCCTTCACCTGGGCCCGCGATTCCC +
Preference number: 6 (lower is better)
Translates to: GPWSPLRAHSRV*EQEPSPGPAIP
Trigger: GGGAATCGCGGGCCCAGGTGAAGGCTCCTGTTCCCACACTCTTGAGTGGGCTCTGAGGGGACTCCACGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CAA 72 bp CGGGGCGGGAGGGAGGGTATGGAGGCAGCGGAGCTGTaGCTTCCTGCGCGGTTGGGAACTGTCTGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: RGGREGMEAAEL*LPARLGTVWPV
Trigger: AACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCTCCATACCCTCCCTCCCGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS GCA 72 bp GGGGCGGGAGGGAGGGTATGGAGGCAGCGGAGCTGTTaGTTCCTGCGCGGTTGGGAACTGTCTGGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: GAGGRVWRQRSC*FLRGWELSGLF
Trigger: AAACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCTCCATACCCTCCCTCCCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp GCCGGGGTTGATTCAAGCCAGGTACTCTGCACCGCGTaGGCCCGTGGAGTCCCCTCAGAGCCCACTCAAGAG +
Preference number: 6 (lower is better)
Translates to: AGVDSSQVLCTA*ARGVPSEPTQE
Trigger: CTCTTGAGTGGGCTCTGAGGGGACTCCACGGGCCCACGCGGTGCAGAGTACCTGGCTTGAATCAACCCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp TGGGCCTGTCCCTGCGTTCCCAGGCCCGTATCTGGGTaGGGGGCGGTGTCACCTCTTTCTTTCCCGAACCCT +
Preference number: 6 (lower is better)
Translates to: WACPCVPRPVSG*GAVSPLSFPNP
Trigger: AGGGTTCGGGAAAGAAAGAGGTGACACCGCCCCCCACCCAGATACGGGCCTGGGAACGCAGGGACAGGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS GCA 72 bp TTGACCTCTGAGGTTCCGTCAAACCTCAATGCCTCCTaGCCACCAGTTCCGGGAGACAGGCATGAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: LTSEVPSNLNAS*PPVPGDRHEGD
Trigger: GTCCCCCTCATGCCTGTCTCCCGGAACTGGTGGGCAGGAGGCATTGAGGTTTGACGGAACCTCAGAGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS GCA 72 bp GAGGGAGGGTATGGAGGCAGCGGAGCTGTTGCTTCCTaGGCGGTTGGGAACTGTCTGGCCTGTTTTCTAGCA +
Preference number: 6 (lower is better)
Translates to: EGGYGGSGAVAS*AVGNCLACFLA
Trigger: TGCTAGAAAACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCTCCATACCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp GTATGGAGGCAGCGGAGCTGTTGCTTCCTGCGCGGTTaGGAACTGTCTGGCCTGTTTTCTAGCATGCAAATA +
Preference number: 6 (lower is better)
Translates to: VWRQRSCCFLRG*ELSGLFSSMQI
Trigger: TATTTGCATGCTAGAAAACAGGCCAGACAGTTCCCAACCGCGCAGGAAGCAACAGCTCCGCTGCCTCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 72 bp CACGTGGTGGGTACCCGAGGGATGACAGCCCCCACGTaGCTGATTATTAATATCACCTGTAAGTGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: HVVGTRGMTAPT*LIINITCKCLG
Trigger: GCCCAAACACTTACAGGTGATATTAATAATCAGTCACGTGGGGGCTGTCATCCCTCGGGTACCCACCACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 72 bp GAACTGTCTGGCCTGTTTTCTAGCATGCAAATAGGGTaGCGGGCACAGCTCATGCAGTGCTGGGACAGACAT +
Preference number: 6 (lower is better)
Translates to: ELSGLFSSMQIG*RAQLMQCWDRH
Trigger: ATGTCTGTCCCAGCACTGCATGAGCTGTGCCCGTCACCCTATTTGCATGCTAGAAAACAGGCCAGACAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 72 bp CCAACAGGTGAAGTGACTTGTCCGGGATCACATGGCTaGCAAAAGCCGGGGTTGATTCAAGCCAGGTACTCT +
Preference number: 6 (lower is better)
Translates to: PTGEVTCPGSHG*QKPGLIQARYS
Trigger: AGAGTACCTGGCTTGAATCAACCCCGGCTTTTGTCAGCCATGTGATCCCGGACAAGTCACTTCACCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS GCA 72 bp CTATGCCCAGACATTGTGTTAAACAGCCACTTTACATaGGTCCCCTCACCAAATCCTCAGAAAGTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: LCPDIVLNSHFT*VPSPNPQKVPV
Trigger: CACGGGGACTTTCTGAGGATTTGGTGAGGGGACGCATGTAAAGTGGCTGTTTAACACAATGTCTGGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CAA 72 bp TCACCTGTAAGTGTTTGGGCTGAAAAGATGACACCGTaGACCTCTGAGGTTCCGTCAAACCTCAATGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPVSVWAEKMTP*TSEVPSNLNAS
Trigger: GGAGGCATTGAGGTTTGACGGAACCTCAGAGGTCAACGGTGTCATCTTTTCAGCCCAAACACTTACAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CAA 90 bp TTATTAATATCACCTGTAAGTGTTTGGGCTGAAAAGATGACACCGTaGACCTCTGAGGTTCCGTCAAACCTCAATGCCTCCTGCCCACCA +
Preference number: 6 (lower is better)
Translates to: LLISPVSVWAEKMTP*TSEVPSNLNASCPP
Trigger: TGGTGGGCAGGAGGCATTGAGGTTTGACGGAACCTCAGAGGTCAACGGTGTCATCTTTTCAGCCCAAACACTTACAGGTGATATTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS CCA 72 bp CATGCGTCCCCTCACCAAATCCTCAGAAAGTCCCCGTaGGATCGCCATTGTTCTTATTCTCTTTATAAATGC +
Preference number: 6 (lower is better)
Translates to: HASPHQILRKSP*DRHCSYSLYKC
Trigger: GCATTTATAAAGAGAATAAGAACAATGGCGATCCCACGGGGACTTTCTGAGGATTTGGTGAGGGGACGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562045.1
CDS TCA 72 bp CTTTCTTTCCCGAACCCTCGCGTATTTAGTAATTATTaGCAACACGGGCCGTTTAGTGAGCATCTACTATGC +
Preference number: 6 (lower is better)
Translates to: LSFPNPRVFSNY*QHGPFSEHLLC
Trigger: GCATAGTAGATGCTCACTAAACGGCCCGTGTTGTCAATAATTACTAAATACGCGAGGGTTCGGGAAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562045.1