RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNGR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100321

Ensembl transcript IDs: ENST00000216155.11, ENST00000318801.8, ENST00000328933.10, ENST00000381535.4, ENST00000406293.7, ENST00000415332.1, ENST00000489206.1

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGGAGGGGCCGGGGCACCGACAAGGGCTGTGCGCACCAGGACATaGGGAGTGTCAGGTCAAGTGCATCGCTGGGAGGCAGCCGGCCCA +
Preference number: 1 (lower is better)
Translates to: AGGAGAPTRAVRTRT*GVSGQVHRWEAAGP
Trigger: TGGGCCGGCTGCCTCCCAGCGATGCACTTGACCTGACACTCCCCATGTCCTGGTGCGCACAGCCCTTGTCGGTGCCCCGGCCCCTCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp GGGGGCAGTGTCTCTCCACGGCCACAGCCCAGGAGCCGACCTGGCTaGTTCCAAAGCCCTGTCCTTGCCGCTCTGCCTCCCATAGGGAGG +
Preference number: 1 (lower is better)
Translates to: GGSVSPRPQPRSRPG*FQSPVLAALPPIGR
Trigger: CCTCCCTATGGGAGGCAGAGCGGCAAGGACAGGGCTTTGGAATCAGCCAGGTCGGCTCCTGGGCTGTGGCCGTGGAGAGACACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp GACATTTCTGGCACTAGGCTGCTCCTGCCACCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCT +
Preference number: 1 (lower is better)
Translates to: DISGTRLLLPPHCQG*YRAAGLCKPGRPTA
Trigger: AGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 90 bp GCCACAGCCCAGGAGCCGACCTGGCTGATTCCAAAGCCCTGTCCTTaGCGCTCTGCCTCCCATAGGGAGGCTGGCTCCACAGTGGGCCTT +
Preference number: 1 (lower is better)
Translates to: ATAQEPTWLIPKPCP*RSASHREAGSTVGL
Trigger: AAGGCCCACTGTGGAGCCAGCCTCCCTATGGGAGGCAGAGCGGCAAGGACAGGGCTTTGGAATCAGCCAGGTCGGCTCCTGGGCTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp CCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGTaGTCTGCAGTCGGGCAGCCTGGGCTTGGCCCCACCTCTATCACT +
Preference number: 1 (lower is better)
Translates to: PSVGMVGGGWPGKST*SAVGQPGLGPTSIT
Trigger: AGTGATAGAGGTGGGGCCAAGCCCAGGCTGCCCGACTGCAGACCACGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp TCCTGGGGGCAGTGTCTCTCCACGGCCACAGCCCAGGAGCCGACCTaGCTGATTCCAAAGCCCTGTCCTTGCCGCTCTGCCTCCCATAGG +
Preference number: 1 (lower is better)
Translates to: SWGQCLSTATAQEPT*LIPKPCPCRSASHR
Trigger: CCTATGGGAGGCAGAGCGGCAAGGACAGGGCTTTGGAATCAGCCAGGTCGGCTCCTGGGCTGTGGCCGTGGAGAGACACTGCCCCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp GGTGAAAACACCCAGCACTGGGCCCGTCCACCACCTGCTCTGCTCTaGTCCCTGAAGGACAGGCCAGTGGACACTGGGTGGACAGGGGGA +
Preference number: 1 (lower is better)
Translates to: GENTQHWARPPPALL*SLKDRPVDTGWTGG
Trigger: TCCCCCTGTCCACCCAGTGTCCACTGGCCTGTCCTTCAGGGAGCAGAGCAGAGCAGGTGGTGGACGGGCCCAGTGCTGGGTGTTTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp CTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCAGCTaGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACT +
Preference number: 1 (lower is better)
Translates to: LGGHKGRESRHLLGS*GQETQASGPALPLT
Trigger: AGTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp GCCGCTCTGCCTCCCATAGGGAGGCTGGCTCCACAGTGGGCCTTCTaGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: AALPPIGRLAPQWAF*KAKETPLMRLAAAA
Trigger: GGCTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACTGTGGAGCCAGCCTCCCTATGGGAGGCAGAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp TGCTCCCTGAAGGACAGGCCAGTGGACACTGGGTGGACAGGGGGATaGGCCCCCAGCGCTCTCCCATACCTCCCTGTCCCTTATGGCTCA +
Preference number: 1 (lower is better)
Translates to: CSLKDRPVDTGWTGG*APSALPYLPVPYGS
Trigger: TGAGCCATAAGGGACAGGGAGGTATGGGAGAGCGCTGGGGGCCCATCCCCCTGTCCACCCAGTGTCCACTGGCCTGTCCTTCAGGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp TCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTaGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGC +
Preference number: 1 (lower is better)
Translates to: SVSWEVTRAGNRGTC*AAGAKKPRRQGQLC
Trigger: GCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp TTTGGGTCACCTGCCACACTCTCCCCTACAGCCCATGGTCTTCCCTaGGCCTCCCATGCCTCAGGGGCTCTTGCCTGTGTCATCCTGGGG +
Preference number: 1 (lower is better)
Translates to: FGSPATLSPTAHGLP*ASHASGALACVILG
Trigger: CCCCAGGATGACACAGGCAAGAGCCCCTGAGGCATGGGAGGCCCAGGGAAGACCATGGGCTGTAGGGGAGAGTGTGGCAGGTGACCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp AGGGGGATGGGCCCCCAGCGCTCTCCCATACCTCCCTGTCCCTTATaGCTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCC +
Preference number: 1 (lower is better)
Translates to: RGMGPQRSPIPPCPL*LSEEPTLCKNRPAP
Trigger: GGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAGCCATAAGGGACAGGGAGGTATGGGAGAGCGCTGGGGGCCCATCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp GCTGTGCGCACCAGGACATGGGGAGTGTCAGGTCAAGTGCATCGCTaGGAGGCAGCCGGCCCAGTCCCTTCTCCCATAAACTCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: AVRTRTWGVSGQVHR*EAAGPVPSPINSWE
Trigger: CTCCCAGGAGTTTATGGGAGAAGGGACTGGGCCGGCTGCCTCCCAGCGATGCACTTGACCTGACACTCCCCATGTCCTGGTGCGCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp GCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTaGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGGCTGCGGTC +
Preference number: 1 (lower is better)
Translates to: AYGCAEAGNSVLYSS*KLRSLNLRTARAAV
Trigger: GACCGCAGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 90 bp AGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTaGTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTT +
Preference number: 1 (lower is better)
Translates to: SSVSWEVTRAGNRGT*WAAGAKKPRRQGQL
Trigger: AAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp CCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAACAGATAACCTaGCCCCATGCTGGTCCCATGTGGGCCACCTGGCGGCGGGGGACT +
Preference number: 1 (lower is better)
Translates to: PLAWYRFHSSGQQIT*PHAGPMWATWRRGT
Trigger: AGTCCCCCGCCGCCAGGTGGCCCACATGGGACCAGCATGGGGGCAGGTTATCTGTTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp CTGCATGCCCTGGCATCTTGGACATTTCTGGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: LHALASWTFLALGCS*HLTARGDTGLPASA
Trigger: TGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
3UTR CCA 90 bp CCTGTCCTTGCCGCTCTGCCTCCCATAGGGAGGCTGGCTCCACAGTaGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: PVLAALPPIGRLAPQ*AFWKAKETPLMRLA
Trigger: AGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACTGTGGAGCCAGCCTCCCTATGGGAGGCAGAGCGGCAAGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp CCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGATTATaGCCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTTTGGGTCACC +
Preference number: 1 (lower is better)
Translates to: PTLCKNRPAPTQKRL*PPQAPRPSLGLWVT
Trigger: GGTGACCCAAAGGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp TGCCACTCACTCACCGTGACCTCGGGCCAGTCACACCCTCATCTGTaGCTTGTTGTCCACCCAGCCCTAGGTAAGGGCTTAGTGACCCCT +
Preference number: 1 (lower is better)
Translates to: CHSLTVTSGQSHPHL*LVVHPALGKGLVTP
Trigger: AGGGGTCACTAAGCCCTTACCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTCACGGTGAGTGAGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp GAGGCAAGGACAGTGATCAGTCCTTTGAGAGACCACGAAGGGGTTTaGTGGAGCCCCCTGGAACAAGCGTCTGTGGGACACGCAGAGCAC +
Preference number: 1 (lower is better)
Translates to: EARTVISPLRDHEGV*WSPLEQASVGHAEH
Trigger: GTGCTCTGCGTGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGTCCTTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp AAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCCCCCGAACCCTaGCTGACCCCAGATGAGAGGAGAGGTGACATAGTGTCCCAGATC +
Preference number: 1 (lower is better)
Translates to: KETPLMRLAAAAPEP*LTPDERRGDIVSQI
Trigger: GATCTGGGACACTATGTCACCTCTCCTCTCATCTGGGGTCAGTCAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp CCACCCATGCCCTTGGTATCTCCAGCACAGGGGCCGGGTAACTGCTaGGTGAGTAAGCAGGTGAGGGATCGCCTGCCTCTTAGGATTCTT +
Preference number: 1 (lower is better)
Translates to: PPMPLVSPAQGPGNC*VSKQVRDRLPLRIL
Trigger: AAGAATCCTAAGAGGCAGGCGATCCCTCACCTGCTTACTCACTCAGCAGTTACCCGGCCCCTGTGCTGGAGATACCAAGGGCATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp GCAAGGACAGTGATCAGTCCTTTGAGAGACCACGAAGGGGTTTGCTaGAGCCCCCTGGAACAAGCGTCTGTGGGACACGCAGAGCACAGA +
Preference number: 1 (lower is better)
Translates to: ARTVISPLRDHEGVC*SPLEQASVGHAEHR
Trigger: TCTGTGCTCTGCGTGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGTCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp TCTGCAGTCGGGCAGCCTGGGCTTGGCCCCACCTCTATCACTAGCTaGCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTCTAGACCTC +
Preference number: 1 (lower is better)
Translates to: SAVGQPGLGPTSITS*LSDSGQVILTSLDL
Trigger: GAGGTCTAGAGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGGGCCAAGCCCAGGCTGCCCGACTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp CCAACTCAGAAGGCAGAAGACCTGACTCCTGAACCTCTCCCTCTGTaGTTGACCTTGGACAAGTCGCTGTCTCCCTACCCCAGACTCTGC +
Preference number: 1 (lower is better)
Translates to: PTQKAEDLTPEPLPL*LTLDKSLSPYPRLC
Trigger: GCAGAGTCTGGGGTAGGGAGACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAGGTTCAGGAGTCAGGTCTTCTGCCTTCTGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp AGCCACACTTCCCAGCATTATCTGGATCTGTCTTTCCCACCATTCTaGCCTCTGGTACCACCAGGGCTTCCTCCACAGCTCATCGCTCCC +
Preference number: 1 (lower is better)
Translates to: SHTSQHYLDLSFPPF*PLVPPGLPPQLIAP
Trigger: GGGAGCGATGAGCTGTGGAGGAAGCCCTGGTGGTACCAGAGGCCAGAATGGTGGGAAAGACAGATCCAGATAATGCTGGGAAGTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 90 bp GATGAGAGGAGAGGTGACATAGTGTCCCAGATCAGTTCTGTTTCCTaGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: DERRGDIVSQISSVS*EVTRAGNRGTCWAA
Trigger: AGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGATCTGGGACACTATGTCACCTCTCCTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp AGGGTGACAGCCCCCAGTGTCCTGTGGGTGTTTACACTCACCCTATaGCCAAGCCACGGTGTAGCCACACTTCCCAGCATTATCTGGATC +
Preference number: 1 (lower is better)
Translates to: RVTAPSVLWVFTLTL*PSHGVATLPSIIWI
Trigger: GATCCAGATAATGCTGGGAAGTGTGGCTACACCGTGGCTTGGTCATAGGGTGAGTGTAAACACCCACAGGACACTGGGGGCTGTCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp AGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTaGAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGG +
Preference number: 1 (lower is better)
Translates to: RMLTLRTVRSLFTPL*RERLLLCTHSSAMG
Trigger: CCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CCA 90 bp CTCCCAGGGCTAACAGGCAGGGTGTCTCAGTTACATGGGGAAACCTaGGATCCCCGAGGCTTTGAAGATCAAGAATCACCAGGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: LPGLTGRVSQLHGET*DPRGFEDQESPGKD
Trigger: ATCCTTCCCTGGTGATTCTTGATCTTCAAAGCCTCGGGGATCCCAGGTTTCCCCATGTAACTGAGACACCCTGCCTGTTAGCCCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 90 bp CAGGGTGTCTCAGTTACATGGGGAAACCTGGGATCCCCGAGGCTTTaGAGATCAAGAATCACCAGGGAAGGATGGAGTAGGGAACTAACG +
Preference number: 1 (lower is better)
Translates to: QGVSVTWGNLGSPRL*RSRITREGWSRELT
Trigger: CGTTAGTTCCCTACTCCATCCTTCCCTGGTGATTCTTGATCTTCAAAGCCTCGGGGATCCCAGGTTTCCCCATGTAACTGAGACACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 90 bp CTTTGGGAGGACTTGGACACACCTGAGTTTAGATCCGTGTTCCACTaGCAACTCGCCTATGCTTGCCGAGCCTCAGTTTCCCTTCTGTTA +
Preference number: 1 (lower is better)
Translates to: LWEDLDTPEFRSVFH*QLAYACRASVSLLL
Trigger: TAACAGAAGGGAAACTGAGGCTCGGCAAGCATAGGCGAGTTGGCAGTGGAACACGGATCTAAACTCAGGTGTGTCCAAGTCCTCCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGATGGCGGCCCGGGCTaGGTCCGTCCCTTCGTTCAG +
Preference number: 2 (lower is better)
Translates to: GVIQGCRPLQAGEAYGCADGGPG*VRPFVQ
Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC...GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACAGGGTGGACAGGGGGATaGGCCCCCAGCGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTGWTGG*APSALP
Trigger: TGGGAGAGCGCTGGGGGCCCATCCCCCTGTCCACCC...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACCCATGTGGGCCACCTaGCGGCGGGGGACTGTGGAC +
Preference number: 2 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTPMWAT*RRGTVD
Trigger: GTCCACAGTCCCCCGCCGCCAGGTGGCCCACATGGG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAACCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQPHCQG*YRAAGL
Trigger: GAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGG...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
3UTR-3UTR GCA 90 bp GGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: GVIQGCRPLQAGEAYGCAKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR GCA 90 bp CTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTTTCTGGCACTAGGCTaGTCCTGCCACCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: LPGVIQGCRPLQAGEAYGFLALG*SCHLTA
Trigger: GGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAA...GCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CCA 90 bp GGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCAGACCTGCCACTGGTTaGCCAGGTAGCAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: GVIQGCRPLQAGEAYGCARPATG*PGSRIP
Trigger: TGGGATTCTGCTACCTGGCCAACCAGTGGCAGGTCT...GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGGACTGCCCCACCCCTaGCCCGAGCTACCCTGGACC +
Preference number: 2 (lower is better)
Translates to: PALTHALTFGLVQVSLFRGLPHP*PELPWT
Trigger: GGTCCAGGGTAGCTCGGGGCAGGGGTGGGGCAGTCC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACCACCTGCTCTGCTCTaGTCCCTGAAGGACAGGCCA +
Preference number: 2 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTPPALL*SLKDRP
Trigger: TGGCCTGTCCTTCAGGGAGCAGAGCAGAGCAGGTGG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCCGGGGTGAGCCCTCTTaGAGGAGGCCAAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGRGEPS*RRPRAR
Trigger: CCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCG...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCGGTTGTCCTTGGGCTTaGAGACCTGCCACTGGTTGG +
Preference number: 2 (lower is better)
Translates to: AGEAYGCAEAGNSVLYSSGCPWA*RPATGW
Trigger: CCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACC...GGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR TCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGCCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWPHCQG*YRAAGL
Trigger: GAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGG...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGACCACGAAGGGGTTTaGTGGAGCCCCCTGGAACAA +
Preference number: 2 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTDHEGV*WSPLEQ
Trigger: TTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTGCCTCAGGGGCTCTTaGCTGTGTCATCCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWACLRGS*LCHPGG
Trigger: GCCCCCAGGATGACACAGGCAAGAGCCCCTGAGGCA...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: RVCQGHIAHEDRARPGALGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCAGGACCAGGGGGATGTaGGTGGAGGGACCCGGAGGT +
Preference number: 2 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPRTRGM*VEGPGG
Trigger: ACCTCCGGGTCCCTCCACCCACATCCCCCTGGTCCT...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACTCTCCCTCTGTGCTTaGCCTTGGACAAGTCGCTGT +
Preference number: 2 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTLSLCA*PWTSRC
Trigger: ACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: MNASRQPMYGAATYLVTVPHCQG*YRAAGL
Trigger: GAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGG...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR TCA 90 bp CCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGGAGGCGGTGAAGGAATaGATGAGTCAGTGGAGAACC +
Preference number: 2 (lower is better)
Translates to: PLQAGEAYGCAEAGNSVLEAVKE*MSQWRT
Trigger: GGTTCTCCACTGACTCATTCATTCCTTCACCGCCTC...CAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR GCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGGCCCTGGGATATACTTaGACATACGTAGACAGTCCC +
Preference number: 2 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGALGYT*TYVDSP
Trigger: GGGACTGTCTACGTATGTGCAAGTATATCCCAGGGC...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp AGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: SVLYSSWKLRSLNLRTARGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR GCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp TACTCCTCCTGGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGGCTGCGGTCGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: YSSWKLRSLNLRTARAAVALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...GACCGCAGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGCAGCCTGTGGGCTCCTaGAGCCAAGGACCCCACCTA +
Preference number: 2 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRQPVGS*SQGPHL
Trigger: TAGGTGGGGTCCTTGGCTCCAGGAGCCCACAGGCTG...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp GTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGGCTAAAAGGAGAAGGCGATaGCGGCCCGGGCTGCGTCCG +
Preference number: 2 (lower is better)
Translates to: VLYSSWKLRSLNLRTARAKRRRR*RPGLRP
Trigger: CGGACGCAGCCCGGGCCGCCATCGCCTTCTCCTTTT...AGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR CAA 90 bp GAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTaGAATCTCCGCACGGCCAGGGCTGCGGTCAGGCTCCAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: EAGNSVLYSSWKLRS*NLRTARAAVRLQVK
Trigger: CTTCACCTGGAGCCTGACCGCAGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR TCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGGGCCGGGTAACTGCTaGGTGAGTAAGCAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSGPGNC*VSKQVR
Trigger: CCTCACCTGCTTACTCACTCAGCAGTTACCCGGCCC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGACCTCTATCACTAGCTaGCTGAGTGATTCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGTSITS*LSDSGQ
Trigger: TTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGT...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGAAGAGCACGTGGTCTaGAGTCGGGCAGCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PALTHALTFGLVQVSLFREEHVV*SRAAWA
Trigger: AGCCCAGGCTGCCCGACTGCAGACCACGTGCTCTTC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCCCAAAGCCCTGTCCTTaGCGCTCTGCCTCCCATAGG +
Preference number: 2 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPPKPCP*RSASHR
Trigger: CCTATGGGAGGCAGAGCGGCAAGGACAGGGCTTTGG...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCTTCCACTGCCCTGCATaGCCTGGCATCTTGGACATT +
Preference number: 2 (lower is better)
Translates to: CSCHLTARGDTGLPASASFHCPA*PGILDI
Trigger: AATGTCCAAGATGCCAGGGCATGCAGGGCAGTGGAA...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
3UTR-3UTR CCA 90 bp GCTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACCGCTCCCCTTTCCAGTaGCCATTTCTGCCAATGTCA +
Preference number: 2 (lower is better)
Translates to: AGQLGPRNPGVRASFATHRSPFQ*PFLPMS
Trigger: TGACATTGGCAGAAATGGCCACTGGAAAGGGGAGCG...GTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCCTCTCATCTCCATCCTaGGCAGGTCCCTGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSLSSPS*AGPCQS
Trigger: GCTCTGGCAGGGACCTGCCCAGGATGGAGATGAGAG...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 90 bp GAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTTaGGGTCACCTGCCACACTCTCCCCTACAGCCCATGGTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: EEIMTSSGPTALFGP*GHLPHSPLQPMVFP
Trigger: AGGGAAGACCATGGGCTGTAGGGGAGAGTGTGGCAGGTGACCCAAAGGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCAGGAGCCGACCTGGCTaGTTCCAAAGCCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSRSRPG*FQSPVL
Trigger: AAGGACAGGGCTTTGGAATCAGCCAGGTCGGCTCCT...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCAGTCAGTGGAGAACCTaGATTGGTTCCTCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: CSCHLTARGDTGLPASASSQWRT*IGSSSQ
Trigger: CTGGCTTGAGGAACCAATTCAGGTTCTCCACTGACT...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
3UTR-3UTR GCA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: MNASRQPMYGAATYLVTVALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: RVCQGHIAHEDRARPGALKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGGCAGAACAGGCCCTTaGCATGCAGCAGAATCAGGG +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSGRTGP*HAAESG
Trigger: CCCTGATTCTGCTGCATGCCAAGGGCCTGTTCTGCC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTGGAACAAGCGTCTGTaGGACACGCAGAGCACAGAG +
Preference number: 2 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAWNKRL*DTQSTE
Trigger: CTCTGTGCTCTGCGTGTCCCACAGACGCTTGTTCCA...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCCCACAGTGGGCCTTCTaGAAGGCCAAGGAAACACCT +
Preference number: 2 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAPQWAF*KAKETP
Trigger: AGGTGTTTCCTTGGCCTTCCAGAAGGCCCACTGTGG...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCCCTCCCTGTCCCTTATaGCTCAGTGAAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSPPCPL*LSEEPT
Trigger: GGTGGGCTCTTCACTGAGCCATAAGGGACAGGGAGG...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGGAGTTAAGCTTACCTaGTACCCTGCCCTCCGGCTG +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSGVKLT*YPALRL
Trigger: CAGCCGGAGGGCAGGGTACCAGGTAAGCTTAACTCC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGACATGCCCTGGCATCTTaGACATTTCTGGCACTAGGC +
Preference number: 2 (lower is better)
Translates to: GRPTAVPRQGTVCCTPPGHALAS*TFLALG
Trigger: GCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATG...TCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR TCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGCTCTTCACACCGCTGTaGAGGGAGAGGCTATTGCTC +
Preference number: 2 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRLFTPL*RERLLL
Trigger: GAGCAATAGCCTCTCCCTTCACAGCGGTGTGAAGAG...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTACATGCGCTTGGCTGCTaGAGCCCCCGAACCCTGACT +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLHALGC*SPRTLT
Trigger: AGTCAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATG...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAATCTCATGCGCTTGGCTaGTGCAGCCCCCGAACCCTG +
Preference number: 2 (lower is better)
Translates to: WTVGEGQNISQPLVVGTESHALG*CSPRTL
Trigger: CAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATGAGA...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGATAACCTGCCCCCATaGTGGTCCCATGTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQDNLPP*WSHVGH
Trigger: GTGGCCCACATGGGACCAGCATGGGGGCAGGTTATC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCTGCCATAAACACTCCTaGCCTCACTCACGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSCHKHS*PHSRPH
Trigger: GTGAGGGCGTGAGTGAGGGCAGGAGTGTTTATGGCA...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp ACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACAGCCTTCCACTGCCCTaGATGCCCTGGCATCTTGGA +
Preference number: 2 (lower is better)
Translates to: TAVKGEAIALHPQLSNGDSLPLP*MPWHLG
Trigger: TCCAAGATGCCAGGGCATGCAGGGCAGTGGAAGGCT...GTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCTACCCTGGACCTCAGTaGGACAAGGCAGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSYPGPQ*DKAEAD
Trigger: ATCAGCCTCTGCCTTGTCCCACTGAGGTCCAGGGTA...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGACACCTCTCATGCGCTTaGCTGCTGCAGCCCCCGAAC +
Preference number: 2 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRHLSCA*LLQPPN
Trigger: GTTCGGGGGCTGCAGCAGCCAAGCGCATGAGAGGTG...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGCCCAGGAGCCGACCTaGCTGATTCCAAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQAQEPT*LIPKPC
Trigger: ACAGGGCTTTGGAATCAGCCAGGTCGGCTCCTGGGC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCCTCTTTGGGCCTTTaGGTCACCTGCCACACTCTC +
Preference number: 2 (lower is better)
Translates to: PALTHALTFGLVQVSLFRPSLGL*VTCHTL
Trigger: GAGAGTGTGGCAGGTGACCCAAAGGCCCAAAGAGGG...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGCCCCTTCTCCGGATTaGAAAATGAAGTCAGCAACA +
Preference number: 2 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTAPSPD*KMKSAT
Trigger: TGTTGCTGACTTCATTTTCCAATCCGGAGAAGGGGC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCAGCCTGTGGGCTCCTaGAGCCAAGGACCCCACCTA +
Preference number: 2 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPQPVGS*SQGPHL
Trigger: TAGGTGGGGTCCTTGGCTCCAGGAGCCCACAGGCTG...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CAA 90 bp AGAGGCAAGGACAGTGATCAGTCCTTTGAGAGACCACGAAGGGGTTaGCTGGAGCCCCCTGGAACAAGCGTCTGTGGGACACGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: RGKDSDQSFERPRRG*LEPPGTSVCGTRRA
Trigger: TGCTCTGCGTGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGTCCTTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp GGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTGAAGCAGCAATGGGGACCATaGACGCCTCTAGGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GQDANPKDSEVTLHTAVKQQWGP*TPLGSP
Trigger: TGGGCTGCCTAGAGGCGTTCATGGTCCCCATTGCTG...CTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAGGCCTTTGGGTCACCTaGCACACTCTCCCCTACAGC +
Preference number: 2 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRGLWVT*HTLPYS
Trigger: GCTGTAGGGGAGAGTGTGGCAGGTGACCCAAAGGCC...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGAAGAGCCCACCTTGTaGAAGAATCGACCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQEEPTL*KNRPAP
Trigger: GGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp TCACACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGTTTCTGGCACTAGGCTaGTCCTGCCACCTCACTGCC +
Preference number: 2 (lower is better)
Translates to: SHRCEGRGYCSAPTAQQWFLALG*SCHLTA
Trigger: GGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAA...CCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAAGGGAGAGGCTATTaGTCTGCACCCACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PDQEPCDILGQDANPKDSEGRGY*SAPTAQ
Trigger: CTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTC...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTAGGCTGATGAGGCGCTaGGCAGGGCAGCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: PTSITSCLSDSGQVILTSRLMRR*AGQPGQ
Trigger: CTGCCCAGGCTGCCCTGCCCAGCGCCTCATCAGCCT...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACACTTCCCAGCATTATCTaGATCTGTCTTTCCCACCAT +
Preference number: 2 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTLPSII*ICLSHH
Trigger: ATGGTGGGAAAGACAGATCCAGATAATGCTGGGAAG...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAATGGTAGGAGGTGGGTaGCCAGGGAAGAGCACGTGG +
Preference number: 2 (lower is better)
Translates to: WTVGEGQNISQPLVVGTEMVGGG*PGKSTW
Trigger: CCACGTGCTCTTCCCTGGCCACCCACCTCCTACCAT...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAGAAAACACCCAGCACTaGGCCCGTCCACCACCTGCT +
Preference number: 2 (lower is better)
Translates to: WTVGEGQNISQPLVVGTEENTQH*ARPPPA
Trigger: AGCAGGTGGTGGACGGGCCCAGTGCTGGGTGTTTTC...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAACTCTGGCCCAGCTTTaGGGCCATCGAAGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLTLAQL*GHRSRD
Trigger: GTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGT...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGCATGCCCTGGCATCTTaGACATTTCTGGCACTAGGC +
Preference number: 2 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRHALAS*TFLALG
Trigger: GCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATG...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp GCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: AVPRQGTVCCTPPGSLGPRPFVQ*VVLGLG
Trigger: TCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG...AGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR CAA 90 bp ACTCAGAAGGCAGAAGACCTGACTCCTGAACCTCTCCCTCTGTGCTaGACCTTGGACAAGTCGCTGTCTCCCTACCCCAGACTCTGCCGA +
Preference number: 2 (lower is better)
Translates to: TQKAEDLTPEPLPLC*TLDKSLSPYPRLCR
Trigger: TCGGCAGAGTCTGGGGTAGGGAGACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAGGTTCAGGAGTCAGGTCTTCTGCCTTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGTCCAGTGGCCATTTCTaGCAATGTCACCACCCATGC +
Preference number: 2 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGSSGHF*QCHHPC
Trigger: GCATGGGTGGTGACATTGGCAGAAATGGCCACTGGA...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGGGCCCGTCCACCACCTaGTCTGCTCTGCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRGPSTT*SALLPE
Trigger: TTCAGGGAGCAGAGCAGAGCAGGTGGTGGACGGGCC...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTACCAGGGGCTGTCCTCTaGCAACAGAAGGAGCGAGTT +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLPGAVL*QQKERV
Trigger: AACTCGCTCCTTCTGTTGGCAGAGGACAGCCCCTGG...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAAGCCTTCCACTGCCCTaGATGCCCTGGCATCTTGGA +
Preference number: 2 (lower is better)
Translates to: VKGEAIALHPQLSNGDHESLPLP*MPWHLG
Trigger: TCCAAGATGCCAGGGCATGCAGGGCAGTGGAAGGCT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACGAGAGGCTATTGCTCTaGACCCACAGCTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: MRTEPDQEPCDILGQDANERLLL*THSSAM
Trigger: CATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGATTTGCTGGAGCCCCCTaGAACAAGCGTCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRFAGAP*NKRLWD
Trigger: GTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAA...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTACTGCCAGAGCAGGGTaGCAGCCCCCAGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: PTSITSCLSDSGQVILTSTARAG*QPPVSC
Trigger: ACAGGACACTGGGGGCTGTCACCCTGCTCTGGCAGT...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACAGTCAGTGGAGAACCTaGATTGGTTCCTCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: MRTEPDQEPCDILGQDANSQWRT*IGSSSQ
Trigger: CTGGCTTGAGGAACCAATTCAGGTTCTCCACTGACT...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR TCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGAGGCGGTGAAGGAATaGATGAGTCAGTGGAGAACC +
Preference number: 2 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFEAVKE*MSQWRT
Trigger: GGTTCTCCACTGACTCATTCATTCCTTCACCGCCTC...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGCCCCTGCGGGGCACATaGCCTGGGATATACTTGCAC +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRPLRGT*PGIYLH
Trigger: GTGCAAGTATATCCCAGGGCATGTGCCCCGCAGGGG...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTATCACACCCTCATCTGTaGCTTGTTGTCCACCCAGCC +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLSHPHL*LVVHPA
Trigger: GGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGA...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp TGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGTTCCACTGCCCTGCATaGCCTGGCATCTTGGACATT +
Preference number: 2 (lower is better)
Translates to: CAEAGNSVLYSSWKLRSLFHCPA*PGILDI
Trigger: AATGTCCAAGATGCCAGGGCATGCAGGGCAGTGGAA...CAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGCATGCCCTGGCATCTTaGACATTTCTGGCACTAGGC +
Preference number: 2 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQHALAS*TFLALG
Trigger: GCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATG...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR TCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAATTTACACTCACCCTATaGCCAAGCCACGGTGTAGCC +
Preference number: 2 (lower is better)
Translates to: WTVGEGQNISQPLVVGTEFTLTL*PSHGVA
Trigger: GGCTACACCGTGGCTTGGTCATAGGGTGAGTGTAAA...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR TCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTAGTCAGTGGAGAACCTaGATTGGTTCCTCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFSQWRT*IGSSSQ
Trigger: CTGGCTTGAGGAACCAATTCAGGTTCTCCACTGACT...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR TCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGGAGGCGGTGAAGGAATaGATGAGTCAGTGGAGAACC +
Preference number: 2 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPEAVKE*MSQWRT
Trigger: GGTTCTCCACTGACTCATTCATTCCTTCACCGCCTC...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR GCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGAGGAAACACCTCTCATaGGCTTGGCTGCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRRKHLS*AWLLQP
Trigger: GGGCTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCT...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGGTCCTCTCCATCACTaGTGTCCTTTGGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLGPLHH*CPLGGL
Trigger: AAGTCCTCCCAAAGGACAGCAGTGATGGAGAGGACC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGAGGATCACCAGCAGCTaGCTGGCACCCGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRRITSS*LAPEEK
Trigger: TTTCTCCTCGGGTGCCAGCCAGCTGCTGGTGATCCT...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGGCCCCCAGTGTCCTGTaGGTGTTTACACTCACCCTA +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRAPSVL*VFTLTL
Trigger: TAGGGTGAGTGTAAACACCCACAGGACACTGGGGGC...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGACACAATGTATGAATaGAAATACCCCTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLDTMYE*KYPWPP
Trigger: TGGGGGCCAGGGGTATTTGCATTCATACATTGTGTC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGATCAGTTCTGTTTCCTaGGAGGTCACAAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRISSVS*EVTRAG
Trigger: CCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGAT...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTaGACCTCTCTAGACCTCAGTTTCCTCAACCATAAAATGGAGACG +
Preference number: 2 (lower is better)
Translates to: PTSITSCLSDSGQVI*TSLDLSFLNHKMET
Trigger: CGTCTCCATTTTATGGTTGAGGAAACTGAGGTCTAGAGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 90 bp GAGTCTTCACTTTATTACTATGTCACCAGAAGTCACCACCTTCACTaGGTTCACCACAGATGGATGGATGTCATAAAGGAGGGTGCCACG +
Preference number: 2 (lower is better)
Translates to: ESSLYYYVTRSHHLH*VHHRWMDVIKEGAT
Trigger: CGTGGCACCCTCCTTTATGACATCCATCCATCTGTGGTGAACCAAGTGAAGGTGGTGACTTCTGGTGACATAGTAATAAAGTGAAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp GCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGT +
Preference number: 3 (lower is better)
Translates to: APATSLPGVIQG*RPLQAGEAYGC
Trigger: ACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 72 bp CTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTaGCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LPASASRGGLRL*RGREQCAVLLL
Trigger: CAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 72 bp ACCCAGCACTGGGCCCGTCCACCACCTGCTCTGCTCTaGTCCCTGAAGGACAGGCCAGTGGACACTGGGTGG +
Preference number: 3 (lower is better)
Translates to: TQHWARPPPALL*SLKDRPVDTGW
Trigger: CCACCCAGTGTCCACTGGCCTGTCCTTCAGGGAGCAGAGCAGAGCAGGTGGTGGACGGGCCCAGTGCTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp TGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTaGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: WEVTRAGNRGTC*AAGAKKPRRQG
Trigger: GCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp CCTCCCATGCCTCAGGGGCTCTTGCCTGTGTCATCCTaGGGGCAGTGTCTCTCCACGGCCACAGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: PPMPQGLLPVSS*GQCLSTATAQE
Trigger: CTCCTGGGCTGTGGCCGTGGAGAGACACTGCCCCCAGGATGACACAGGCAAGAGCCCCTGAGGCATGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GCCGGGGCACCGACAAGGGCTGTGCGCACCAGGACATaGGGAGTGTCAGGTCAAGTGCATCGCTGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: AGAPTRAVRTRT*GVSGQVHRWEA
Trigger: TGCCTCCCAGCGATGCACTTGACCTGACACTCCCCATGTCCTGGTGCGCACAGCCCTTGTCGGTGCCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGTGGAAGCTTAGGTCCTaGAATCTCCGCACGGCCAGG +
Preference number: 3 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVWKLRS*NLRTAR
Trigger: CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCA...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 72 bp TCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTaGTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAG +
Preference number: 3 (lower is better)
Translates to: SWEVTRAGNRGT*WAAGAKKPRRQ
Trigger: CTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp CAGGCCCCACGGCCCTCTTTGGGCCTTTGGGTCACCTaGCACACTCTCCCCTACAGCCCATGGTCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: QAPRPSLGLWVT*HTLPYSPWSSL
Trigger: CAGGGAAGACCATGGGCTGTAGGGGAGAGTGTGGCAGGTGACCCAAAGGCCCAAAGAGGGCCGTGGGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp CTGTGCGCACCAGGACATGGGGAGTGTCAGGTCAAGTaGATCGCTGGGAGGCAGCCGGCCCAGTCCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LCAPGHGECQVK*IAGRQPAQSLL
Trigger: GAGAAGGGACTGGGCCGGCTGCCTCCCAGCGATGCACTTGACCTGACACTCCCCATGTCCTGGTGCGCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp CACAAGGGCAGGGAATCGAGGCACCTGCTGGGCAGCTaGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: HKGRESRHLLGS*GQETQASGPAL
Trigger: CAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GATGGCGGCCCGGGCTGCGTCCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTT +
Preference number: 3 (lower is better)
Translates to: DGGPGCVRPFVQ*VVLGLGDLPLV
Trigger: AACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CAA 90 bp GCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCCCTTCGTTCAGTGGGTaGTCCTTGGGCTTGGAGACC +
Preference number: 3 (lower is better)
Translates to: AGEAYGCAEAGNSVLYSSPSFSG*SLGLET
Trigger: GGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGG...GGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR GCA 72 bp GTTTCACTCTTCAGGCCAACAGATAACCTGCCCCCATaGTGGTCCCATGTGGGCCACCTGGCGGCGGGGGAC +
Preference number: 3 (lower is better)
Translates to: VSLFRPTDNLPP*WSHVGHLAAGD
Trigger: GTCCCCCGCCGCCAGGTGGCCCACATGGGACCAGCATGGGGGCAGGTTATCTGTTGGCCTGAAGAGTGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp TCACTCTTCAGGCCAACAGATAACCTGCCCCCATGCTaGTCCCATGTGGGCCACCTGGCGGCGGGGGACTGT +
Preference number: 3 (lower is better)
Translates to: SLFRPTDNLPPC*SHVGHLAAGDC
Trigger: ACAGTCCCCCGCCGCCAGGTGGCCCACATGGGACCAGCATGGGGGCAGGTTATCTGTTGGCCTGAAGAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACCAACTCGCCTATGCTaGCCGAGCCTCAGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTPTRLC*PSLSFP
Trigger: AGGGAAACTGAGGCTCGGCAAGCATAGGCGAGTTGG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACACATCACTGCTGTCCTTaGGGAGGACTTGGACACACC +
Preference number: 3 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTHHCCP*GGLGHT
Trigger: GGTGTGTCCAAGTCCTCCCAAAGGACAGCAGTGATG...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp GGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGATTCAGTGGGTTGTCCTaGGGCTTGGAGACCTGCCAC +
Preference number: 3 (lower is better)
Translates to: GRPTAVPRQGTVCCTPPGFSGLS*GLETCH
Trigger: GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAA...TCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CAA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCAGACCACGAAGGGGTTaGCTGGAGCCCCCTGGAACA +
Preference number: 3 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGRPRRG*LEPPGT
Trigger: TGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCT...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAACATCTCACAGCCTCTaGTGGTGGGCACAGAACTTC +
Preference number: 3 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTTSHSL*WWAQNF
Trigger: GAAGTTCTGTGCCCACCACAAGAGGCTGTGAGATGT...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp CCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGAGTGGAGAACCTGAATaGGTTCCTCAAGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: PLQAGEAYGCAEAGNSVLSGEPE*VPQASL
Trigger: AAGGCTGGCTTGAGGAACCAATTCAGGTTCTCCACT...CAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR TCA 72 bp CCTCTCATGCGCTTGGCTGCTGCAGCCCCCGAACCCTaGCTGACCCCAGATGAGAGGAGAGGTGACATAGTG +
Preference number: 3 (lower is better)
Translates to: PLMRLAAAAPEP*LTPDERRGDIV
Trigger: CACTATGTCACCTCTCCTCTCATCTGGGGTCAGTCAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp ACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTaGATCTCCGCACGGCCAGGGCTGCGGTCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: TVCCTPPGSLGP*ISARPGLRSGS
Trigger: GGAGCCTGACCGCAGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR CCA 72 bp ACCAGGACATGGGGAGTGTCAGGTCAAGTGCATCGCTaGGAGGCAGCCGGCCCAGTCCCTTCTCCCATAAAC +
Preference number: 3 (lower is better)
Translates to: TRTWGVSGQVHR*EAAGPVPSPIN
Trigger: GTTTATGGGAGAAGGGACTGGGCCGGCTGCCTCCCAGCGATGCACTTGACCTGACACTCCCCATGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGGACCACCCATGCCCTaGGTATCTCCAGCACAGGGG +
Preference number: 3 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQGPPMP*VSPAQG
Trigger: CCCCTGTGCTGGAGATACCAAGGGCATGGGTGGTCC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp CCCTTGGTATCTCCAGCACAGGGGCCGGGTAACTGCTaGGTGAGTAAGCAGGTGAGGGATCGCCTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: PLVSPAQGPGNC*VSKQVRDRLPL
Trigger: AAGAGGCAGGCGATCCCTCACCTGCTTACTCACTCAGCAGTTACCCGGCCCCTGTGCTGGAGATACCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp GGCTGGCACCCGAGGAGAAACAGATGGGCAGTACCCTaGGGTCTCCTAGTGCCCATCAGCAGGAGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: GWHPRRNRWAVP*GLLVPISRRGF
Trigger: AAAGCCTCTCCTGCTGATGGGCACTAGGAGACCTCAGGGTACTGCCCATCTGTTTCTCCTCGGGTGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp CTCACCGTGACCTCGGGCCAGTCACACCCTCATCTGTaGCTTGTTGTCCACCCAGCCCTAGGTAAGGGCTTA +
Preference number: 3 (lower is better)
Translates to: LTVTSGQSHPHL*LVVHPALGKGL
Trigger: TAAGCCCTTACCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTCACGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp TGGTACAGGTTTCACTCTTCAGGCCAACAGATAACCTaGCCCCATGCTGGTCCCATGTGGGCCACCTGGCGG +
Preference number: 3 (lower is better)
Translates to: WYRFHSSGQQIT*PHAGPMWATWR
Trigger: CCGCCAGGTGGCCCACATGGGACCAGCATGGGGGCAGGTTATCTGTTGGCCTGAAGAGTGAAACCTGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GGCCCCCAGCGCTCTCCCATACCTCCCTGTCCCTTATaGCTCAGTGAAGAGCCCACCTTGTGCAAGAATCGA +
Preference number: 3 (lower is better)
Translates to: GPQRSPIPPCPL*LSEEPTLCKNR
Trigger: TCGATTCTTGCACAAGGTGGGCTCTTCACTGAGCCATAAGGGACAGGGAGGTATGGGAGAGCGCTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp TGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTaGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGG +
Preference number: 3 (lower is better)
Translates to: CAEAGNSVLYSS*KLRSLNLRTAR
Trigger: CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR-3UTR CAA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGCGTCAGGGCCAGCTTaGCCACTCACTCACCGTGAC +
Preference number: 3 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLASGPA*PLTHRD
Trigger: GTCACGGTGAGTGAGTGGCAAAGCTGGCCCTGACGC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp TGCAAGAATCGACCTGCCCCCACTCAGAAGAGATTATaGCCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: CKNRPAPTQKRL*PPQAPRPSLGL
Trigger: AAGGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp GAGAGGTGCACGGGTTTGTCAGGGTCACATAGCACATaGGGACAGAGCCAGACCAGGAGCCCTGTGACATCC +
Preference number: 3 (lower is better)
Translates to: ERCTGLSGSHST*GQSQTRSPVTS
Trigger: GGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCGTGCACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR GCA 72 bp TGCCAATGTCACCACCCATGCCCAGCACAGGCCGGATaGCCAGTAGGCGCTCAAGGAATGCTTGATGACACA +
Preference number: 3 (lower is better)
Translates to: CQCHHPCPAQAG*PVGAQGMLDDT
Trigger: TGTGTCATCAAGCATTCCTTGAGCGCCTACTGGGCATCCGGCCTGTGCTGGGCATGGGTGGTGACATTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GTGATCAGTCCTTTGAGAGACCACGAAGGGGTTTGCTaGAGCCCCCTGGAACAAGCGTCTGTGGGACACGCA +
Preference number: 3 (lower is better)
Translates to: VISPLRDHEGVC*SPLEQASVGHA
Trigger: TGCGTGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp CAGCCTGATGGGGAAGATCATGCCTGGAAGGGCTTCTaGGCTGAACCCGGGAAGAGTGAGGGATTCTTCGTG +
Preference number: 3 (lower is better)
Translates to: QPDGEDHAWKGF*AEPGKSEGFFV
Trigger: CACGAAGAATCCCTCACTCTTCCCGGGTTCAGCCCAGAAGCCCTTCCAGGCATGATCTTCCCCATCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp GCTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACGCGCTCAAGGAATGCTaGATGACACAATGTATGAAT +
Preference number: 3 (lower is better)
Translates to: AGQLGPRNPGVRASFATHALKEC*MTQCMN
Trigger: ATTCATACATTGTGTCATCAAGCATTCCTTGAGCGC...GTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR TCA 72 bp GCCCCCAGTGTCCTGTGGGTGTTTACACTCACCCTATaGCCAAGCCACGGTGTAGCCACACTTCCCAGCATT +
Preference number: 3 (lower is better)
Translates to: APSVLWVFTLTL*PSHGVATLPSI
Trigger: AATGCTGGGAAGTGTGGCTACACCGTGGCTTGGTCATAGGGTGAGTGTAAACACCCACAGGACACTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp ACAGTGATCAGTCCTTTGAGAGACCACGAAGGGGTTTaGTGGAGCCCCCTGGAACAAGCGTCTGTGGGACAC +
Preference number: 3 (lower is better)
Translates to: TVISPLRDHEGV*WSPLEQASVGH
Trigger: GTGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp AAGGCAGAAGACCTGACTCCTGAACCTCTCCCTCTGTaGTTGACCTTGGACAAGTCGCTGTCTCCCTACCCC +
Preference number: 3 (lower is better)
Translates to: KAEDLTPEPLPL*LTLDKSLSPYP
Trigger: GGGGTAGGGAGACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAGGTTCAGGAGTCAGGTCTTCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GGTCTCCTAGTGCCCATCAGCAGGAGAGGCTTTTGGTaGACAGTGGGTGAGGGTCAGAACATCTCACAGCCT +
Preference number: 3 (lower is better)
Translates to: GLLVPISRRGFW*TVGEGQNISQP
Trigger: AGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCACCAAAAGCCTCTCCTGCTGATGGGCACTAGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGGCATGCCCTGGCATCTaGGACATTTCTGGCACTAGG +
Preference number: 3 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPACPGI*DISGTR
Trigger: CCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGC...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CAA 90 bp GGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTGAAGGCATGCCCTGGCATCTaGGACATTTCTGGCACTAGG +
Preference number: 3 (lower is better)
Translates to: GQDANPKDSEVTLHTAVKACPGI*DISGTR
Trigger: CCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGC...CTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CAA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACAGTGGAGAACCTGAATaGGTTCCTCAAGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: MRTEPDQEPCDILGQDANSGEPE*VPQASL
Trigger: AAGGCTGGCTTGAGGAACCAATTCAGGTTCTCCACT...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR TCA 72 bp ACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTaGAGGGAGAGGCTATTGCTCTGCACCCACAGCTCA +
Preference number: 3 (lower is better)
Translates to: TLRTVRSLFTPL*RERLLLCTHSS
Trigger: TGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CCA 72 bp AGAGGTGACATAGTGTCCCAGATCAGTTCTGTTTCCTaGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGC +
Preference number: 3 (lower is better)
Translates to: RGDIVSQISSVS*EVTRAGNRGTC
Trigger: GCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGATCTGGGACACTATGTCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GGGTCCTCTCCATCACTGCTGTCCTTTGGGAGGACTTaGACACACCTGAGTTTAGATCCGTGTTCCACTGCC +
Preference number: 3 (lower is better)
Translates to: GSSPSLLSFGRT*THLSLDPCSTA
Trigger: GGCAGTGGAACACGGATCTAAACTCAGGTGTGTCCAAGTCCTCCCAAAGGACAGCAGTGATGGAGAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAATGCCCTGGGATATACTaGCACATACGTAGACAGTCC +
Preference number: 3 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQCPGIY*HIRRQS
Trigger: GGACTGTCTACGTATGTGCAAGTATATCCCAGGGCA...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGTGGAGAACCTGAATaGGTTCCTCAAGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASSGEPE*VPQASL
Trigger: AAGGCTGGCTTGAGGAACCAATTCAGGTTCTCCACT...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR TCA 72 bp GGACTGTGGACAGAGCCCCTTCTCCGGATTGGAAAATaGAGTCAGCAACAACCAGCTGTCACACAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GLWTEPLLRIGK*SQQQPAVTQLA
Trigger: AGCCAGCTGTGTGACAGCTGGTTGTTGCTGACTTCATTTTCCAATCCGGAGAAGGGGCTCTGTCCACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp CCCTGTCCCTTATGGCTCAGTGAAGAGCCCACCTTGTaGAAGAATCGACCTGCCCCCACTCAGAAGAGATTA +
Preference number: 3 (lower is better)
Translates to: PCPLWLSEEPTL*KNRPAPTQKRL
Trigger: TAATCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAGCCATAAGGGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR GCA 72 bp GACTTGGACACACCTGAGTTTAGATCCGTGTTCCACTaGCAACTCGCCTATGCTTGCCGAGCCTCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: DLDTPEFRSVFH*QLAYACRASVS
Trigger: GGAAACTGAGGCTCGGCAAGCATAGGCGAGTTGGCAGTGGAACACGGATCTAAACTCAGGTGTGTCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp CCAAGCCACGGTGTAGCCACACTTCCCAGCATTATCTaGATCTGTCTTTCCCACCATTCTGGCCTCTGGTAC +
Preference number: 3 (lower is better)
Translates to: PSHGVATLPSII*ICLSHHSGLWY
Trigger: GTACCAGAGGCCAGAATGGTGGGAAAGACAGATCCAGATAATGCTGGGAAGTGTGGCTACACCGTGGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CCA 72 bp GAGGTTGGTCCATTATCACCCCTCAGTTCAGGTAAGTaGACTGAGGCTGAGAGAGGTGCACGGGTTTGTCAG +
Preference number: 3 (lower is better)
Translates to: EVGPLSPLSSGK*TEAERGARVCQ
Trigger: CTGACAAACCCGTGCACCTCTCTCAGCCTCAGTCCACTTACCTGAACTGAGGGGTGATAATGGACCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CAA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAATCTGGGCAAGTAATCTaGACCTCTCTAGACCTCAGT +
Preference number: 3 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQSGQVI*TSLDLS
Trigger: ACTGAGGTCTAGAGAGGTCAAGATTACTTGCCCAGA...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR-3UTR CAA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGTCCACGGCTGTCCATTaGGAAGAGATATTGATGTGT +
Preference number: 3 (lower is better)
Translates to: RVCQGHIAHEDRARPGALSTAVH*EEILMC
Trigger: ACACATCAATATCTCTTCCAAATGGACAGCCGTGGA...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR-3UTR CAA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAATCCACGGCTGTCCATTaGGAAGAGATATTGATGTGT +
Preference number: 3 (lower is better)
Translates to: VKGEAIALHPQLSNGDHESTAVH*EEILMC
Trigger: ACACATCAATATCTCTTCCAAATGGACAGCCGTGGA...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CCA 72 bp GAGCTTACATTTATTGAGCATGCTTGTGCTAAGCCCTaGGCTGGCCTTTGTTTCATTGGCACAACAGCCTTG +
Preference number: 3 (lower is better)
Translates to: ELTFIEHACAKP*AGLCFIGTTAL
Trigger: CAAGGCTGTTGTGCCAATGAAACAAAGGCCAGCCCAGGGCTTAGCACAAGCATGCTCAATAAATGTAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCAGGCGCCCCCGGCTTTaGCCGCTCCGTACGCACCCC +
Preference number: 4 (lower is better)
Translates to: AGEAYGCAEAGNSVLYSSRRPRL*PLRTHP
Trigger: GGGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCT...GGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp CTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCGATGGCGGCCCGGGCTaGGTCCGTCCCTTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LPGVIQGCRPLQAGEAYGDGGPG*VRPFVQ
Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC...GCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCAGGCGCCCCCGGCTTTaGCCGCTCCGTACGCACCCC +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASRRPRL*PLRTHP
Trigger: GGGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCT...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000415332.1
CDS-3UTR GCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGGATGGCGGCCCGGGCTaGGTCCGTCCCTTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGDGGPG*VRPFVQ
Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGCGGGGTGAGCCCTCTTaGAGGAGGCCAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGRGEPS*RRPRAR
Trigger: CCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCG...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGTGTGCAGGGGGTACCTaGTGGGTGGGGCTCACCCGA +
Preference number: 4 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVCAGGT*WVGLTR
Trigger: TCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACA...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAACACCCCCTTCCATCGTaGCTGCACCCGCGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQHPLPS*LHPRGA
Trigger: GGCACCGCGCGGGTGCAGCCACGATGGAAGGGGGTG...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000415332.1
CDS-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACGGGATCCGGCCCAGTaGGCTCCACGTAGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTRDPAQ*APRRAR
Trigger: ACGCGCCCTACGTGGAGCCCACTGGGCCGGATCCCG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGAGGACCAGGGGGATGTaGGTGGAGGGACCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGRTRGM*VEGPGG
Trigger: ACCTCCGGGTCCCTCCACCCACATCCCCCTGGTCCT...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACACCCATGTGGGCCACCTaGCGGCGGGGGACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTPMWAT*RRGTVD
Trigger: GTCCACAGTCCCCCGCCGCCAGGTGGCCCACATGGG...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGCCTCGGAGGCGCTGTTaGGGTAGCCCTCGTTCACGA +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGPRRRC*GSPRSR
Trigger: TCGTGAACGAGGGCTACCTCAACAGCGCCTCCGAGG...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGATGGCGGCCCGGGCTaGGTCCGTCCCTTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQDGGPG*VRPFVQ
Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR GCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACCGGCTGCTGGTAGGTaGCGCCCATACCGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTPAAGR*RPYRRD
Trigger: ATCCCGCCGGTATGGGCGGCACCTACCAGCAGCCGG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGTCTCATGCGCTTGGCTaGTGCAGCCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGSHALG*CSPRTL
Trigger: CAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATGAGA...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGGGAGGCCTACGGCTGTaGCGAGGCAGGGAACAGTGT +
Preference number: 4 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVGGLRL*RGREQC
Trigger: ACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCC...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GATGGCGGCCCGGGCTGCGTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DGGPGCVRPFVQWVVLGLGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...AAGCCCAAGGACAACCCACTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR CAA 72 bp GCGGCCCGGGCTGCGTCCGTCCCTTCGTTCAGTGGGTaGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AARAASVPSFSG*SLGLETCHWLA
Trigger: GGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGACGCAGCCCGGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGGGACTGCCCCACCCCTaGCCCGAGCTACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRGLPHP*PELPWT
Trigger: GGTCCAGGGTAGCTCGGGGCAGGGGTGGGGCAGTCC...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GATGGCGGCCCGGGCTGCGTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTACACGACGCGCAGGATaGTGTGCGGCTGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: DGGPGCVRPFVQWVVLGLTRRAG*CAAAGP
Trigger: TGGTCCGGCAGCCGCACACCATCCTGCGCGTCGTGT...AAGCCCAAGGACAACCCACTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAGCAGGGGGTACCTGCTaGGTGGGGCTCACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: GRPTAVPRQGTVCCTPPGAGGTC*VGLTRD
Trigger: GTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGC...TCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCCTCGGAGGCGCTGTTaGGGTAGCCCTCGTTCACGA +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASPRRRC*GSPRSR
Trigger: TCGTGAACGAGGGCTACCTCAACAGCGCCTCCGAGG...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR TCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGAGCAGCACCCGGGGTaGGCCCTCTTGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSEQHPG*ALLEEA
Trigger: GGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GCTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACCCCCCGAACCCTGACTaGCCCCAGATGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGQLGPRNPGVRASFATHPPNPD*PQMRGE
Trigger: CTCTCCTCTCATCTGGGGTCAGTCAGGGTTCGGGGG...GTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGAGGCGCCCCCGGCTTTaGCCGCTCCGTACGCACCCC +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRRRPRL*PLRTHP
Trigger: GGGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCT...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGACGGCCACGCCATAGCTaGAGGCGTTGGGGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GRPTAVPRQGTVCCTPPGRPRHS*RRWGCG
Trigger: ACCGCAACCCCAACGCCTGCAGCTATGGCGTGGCCG...TCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GCTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACAGGGCGCGTAAGGCATaGTGGAGTCCTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGQLGPRNPGVRASFATHRARKA*WSPGWG
Trigger: ACCCCAGCCAGGACTCCAGCATGCCTTACGCGCCCT...GTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGTGCCTCAGGGGCTCTTaGCTGTGTCATCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTCLRGS*LCHPGG
Trigger: GCCCCCAGGATGACACAGGCAAGAGCCCCTGAGGCA...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACACCGACAAGGGCTGTaGGCACCAGGACATGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTHRQGL*APGHGE
Trigger: CTCCCCATGTCCTGGTGCGCACAGCCCTTGTCGGTG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCGGAGGCCTACGGCTGTaGCGAGGCAGGGAACAGTGT +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASGGLRL*RGREQC
Trigger: ACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCC...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGCACCCCCTTCCATCGTaGCTGCACCCGCGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRHPLPS*LHPRGA
Trigger: GGCACCGCGCGGGTGCAGCCACGATGGAAGGGGGTG...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318801.8
CDS-3UTR CCA 90 bp CTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTCAGTGGGTTGTCCTTaGGCTTGGAGACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LPGVIQGCRPLQAGEAYGSVGCP*AWRPAT
Trigger: AGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGA...GCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GVIQGCRPLQAGEAYGCARPFVQ*VVLGLG
Trigger: TCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG...GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGGGTGGACAGGGGGATaGGCCCCCAGCGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSGWTGG*APSALP
Trigger: TGGGAGAGCGCTGGGGGCCCATCCCCCTGTCCACCC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACATGCGACACCCCCAGGTaGATAGGAGCCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTCDTPR*IGAVQA
Trigger: TGCCTGCACGGCTCCTATCCACCTGGGGGTGTCGCA...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCCCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GCAEAGNSVLYSSWKLRSPHCQG*YRAAGL
Trigger: GAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGG...GGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCACGCGCAGGATGGTGTaGGGCTGCCGGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPTRRMV*GCRTRV
Trigger: CACCCTGGTCCGGCAGCCGCACACCATCCTGCGCGT...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGTTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVLTLLI*GKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAA...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGGATAACCTGCCCCCATaGTGGTCCCATGTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTDNLPP*WSHVGH
Trigger: GTGGCCCACATGGGACCAGCATGGGGGCAGGTTATC...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGTGCCATAAACACTCCTaGCCTCACTCACGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGCHKHS*PHSRPH
Trigger: GTGAGGGCGTGAGTGAGGGCAGGAGTGTTTATGGCA...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCCAAGGGCTGCCGGCCTCTaGAAGCCGGGGAGGCCTACG +
Preference number: 4 (lower is better)
Translates to: SLRSVGCPWAWRPATGWPRAAGL*KPGRPT
Trigger: CGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCT...TGGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCTTCCACTGCCCTGCATaGCCTGGCATCTTGGACATT +
Preference number: 4 (lower is better)
Translates to: GVIQGCRPLQAGEAYGCAFHCPA*PGILDI
Trigger: AATGTCCAAGATGCCAGGGCATGCAGGGCAGTGGAA...GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGAGCCCTCGTTCACGATaGAGCCGAACACCACTATGG +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGSPRSR*SRTPLW
Trigger: CCATAGTGGTGTTCGGCTCCATCGTGAACGAGGGCT...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGCATAGCTGCAGGCGTTaGGGTTGCGGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGHSCRR*GCGCRC
Trigger: GCATCTACAACCGCAACCCCAACGCCTGCAGCTATG...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GCTGCGTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACAAAAGGAGAAGGCGATaGCGGCCCGGGCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: AASVPSFSGLSLGLETCHKRRRR*RPGLRP
Trigger: CGGACGCAGCCCGGGCCGCCATCGCCTTCTCCTTTT...GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGAAAACACCCAGCACTaGGCCCGTCCACCACCTGCT +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTENTQH*ARPPPA
Trigger: AGCAGGTGGTGGACGGGCCCAGTGCTGGGTGTTTTC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCAGTGGGGGCCCAGGATaGGGACCGCCCTTCACCGCA +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSSGGPG*GPPFTA
Trigger: TGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 72 bp ATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTTaGGGTCACCTGCCACACTCTCCCCTACAGCCCATG +
Preference number: 4 (lower is better)
Translates to: MTSSGPTALFGP*GHLPHSPLQPM
Trigger: CATGGGCTGTAGGGGAGAGTGTGGCAGGTGACCCAAAGGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACAAGATGGGCAGTACCCTaGGGTCTCCTAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTRWAVP*GLLVPI
Trigger: GATGGGCACTAGGAGACCTCAGGGTACTGCCCATCT...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTCCTCACTGCCAGGGGTaGTACAGGGCTGCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSPHCQG*YRAAGL
Trigger: GAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGG...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGGGTCACATAGCACATaGGGACAGAGCCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQGSHST*GQSQTR
Trigger: CCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCC...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCGGGAATCGAGGCACCTaGTGGGCAGCTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGGNRGT*WAAGAK
Trigger: CTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATTCCC...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCCATGCGCTTGGCTGCTaGAGCCCCCGAACCCTGACT +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAHALGC*SPRTLT
Trigger: AGTCAGGGTTCGGGGGCTGCAGCAGCCAAGCGCATG...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCCCTGCAGGGTCCAGCTaGAGGAGGGCCCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAPAGSS*RRALLQ
Trigger: TTGGAGAAGGGCCCTCCTGCAGCTGGACCCTGCAGG...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGGGGGTGATACAGGGCTaGCGGCCTCTGCAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWGVIQG*RPLQAG
Trigger: CCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCC...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCGGTTGTCCTTGGGCTTaGAGACCTGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASGCPWA*RPATGW
Trigger: CCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACC...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGAAAAGGAGAAGGCGATaGCGGCCCGGGCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRKRRRR*RPGLRP
Trigger: CGGACGCAGCCCGGGCCGCCATCGCCTTCTCCTTTT...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGCGGTGTCGAAGGTGTTaGCCGGCTGCTGGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRRCRRC*PAAGRC
Trigger: GCACCTACCAGCAGCCGGCCAACACCTTCGACACCG...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACAGGCAGAACAGGCCCTTaGCATGCAGCAGAATCAGGG +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTGRTGP*HAAESG
Trigger: CCCTGATTCTGCTGCATGCCAAGGGCCTGTTCTGCC...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAAATCGAGGCACCTGCTaGGCAGCTGGGGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTNRGTC*AAGAKK
Trigger: TTTCTTGGCCCCAGCTGCCCAGCAGGTGCCTCGATT...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGATCAGTTCTGTTTCCTaGGAGGTCACAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGISSVS*EVTRAG
Trigger: CCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGAT...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGCACCTCTCATGCGCTTaGCTGCTGCAGCCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRHLSCA*LLQPPN
Trigger: GTTCGGGGGCTGCAGCAGCCAAGCGCATGAGAGGTG...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACACCTCCCTGTCCCTTATaGCTCAGTGAAGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTPPCPL*LSEEPT
Trigger: GGTGGGCTCTTCACTGAGCCATAAGGGACAGGGAGG...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGGGTACCTGCTGGGTaGGGCTCACCCGAGACACCG +
Preference number: 4 (lower is better)
Translates to: VRPFVQWVVLGLGDLPLVGVPAG*GSPETP
Trigger: CGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCC...AACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGTCCTCATCTGAAACATaGGAAGAAGGGTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVSSSET*EEGWQP
Trigger: CGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGA...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGACTCAGAAGAGATTATaGCCTCCTCAGGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTTQKRL*PPQAPR
Trigger: CCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGT...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGGGGCCGGGTAACTGCTaGGTGAGTAAGCAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRGPGNC*VSKQVR
Trigger: CCTCACCTGCTTACTCACTCAGCAGTTACCCGGCCC...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAACTCTTCACACCGCTGTaGAGGGAGAGGCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQLFTPL*RERLLL
Trigger: GAGCAATAGCCTCTCCCTTCACAGCGGTGTGAAGAG...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGACGCGCAGGATGGTGTaGGGCTGCCGGACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQTRRMV*GCRTRV
Trigger: CACCCTGGTCCGGCAGCCGCACACCATCCTGCGCGT...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318801.8
CDS-3UTR GCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGCGGCCACGCCATAGCTaGAGGCGTTGGGGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWRPRHS*RRWGCG
Trigger: ACCGCAACCCCAACGCCTGCAGCTATGGCGTGGCCG...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCGGCCACGCCATAGCTaGAGGCGTTGGGGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRRPRHS*RRWGCG
Trigger: ACCGCAACCCCAACGCCTGCAGCTATGGCGTGGCCG...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACATTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTLTLLI*GKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAA...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAATTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQLTLLI*GKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAA...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR GCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGGATGGCGGCCCGGGCTaGGTCCGTCCCTTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQDGGPG*VRPFVQ
Trigger: CTGAACGAAGGGACGGACGCAGCCCGGGCCGCCATC...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCCCACCTGCTCTGCTCTaGTCCCTGAAGGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAPPALL*SLKDRP
Trigger: TGGCCTGTCCTTCAGGGAGCAGAGCAGAGCAGGTGG...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGGAGGCCTACGGCTGTaGCGAGGCAGGGAACAGTGT +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRGGLRL*RGREQC
Trigger: ACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGAGGGCTGCCGGCCTCTaGAAGCCGGGGAGGCCTACG +
Preference number: 4 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPRAAGL*KPGRPT
Trigger: CGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCT...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAAGGGCTGCCGGCCTCTaGAAGCCGGGGAGGCCTACG +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHERAAGL*KPGRPT
Trigger: CGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RPFVQWVVLGLGDLPLVGALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...GCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGACACGACGCGCAGGATaGTGTGCGGCTGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWTRRAG*CAAAGP
Trigger: TGGTCCGGCAGCCGCACACCATCCTGCGCGTCGTGT...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318801.8
CDS-3UTR CCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCATAGCTGCAGGCGTTaGGGTTGCGGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASHSCRR*GCGCRC
Trigger: GCATCTACAACCGCAACCCCAACGCCTGCAGCTATG...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR CCA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCAGACCTGCCACTGGTTaGCCAGGTAGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: CSCHLTARGDTGLPASASRPATG*PGSRIP
Trigger: TGGGATTCTGCTACCTGGCCAACCAGTGGCAGGTCT...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR CCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGAAAAGGAGAAGGCGATaGCGGCCCGGGCTGCGTCCG +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRKRRRR*RPGLRP
Trigger: CGGACGCAGCCCGGGCCGCCATCGCCTTCTCCTTTT...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGCGCGTAAGGCATGCTaGAGTCCTGGCTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSARKAC*SPGWGP
Trigger: TGGACCCCAGCCAGGACTCCAGCATGCCTTACGCGC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACATGGAACAAGCGTCTGTaGGACACGCAGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTWNKRL*DTQSTE
Trigger: CTCTGTGCTCTGCGTGTCCCACAGACGCTTGTTCCA...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCCACGAAGGGGTTTGCTaGAGCCCCCTGGAACAAGCG +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWAHEGVC*SPLEQA
Trigger: CGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTG...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACCACAGTGGGCCTTCTaGAAGGCCAAGGAAACACCT +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTPQWAF*KAKETP
Trigger: AGGTGTTTCCTTGGCCTTCCAGAAGGCCCACTGTGG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCACTCTGGCCCAGCTTTaGGGCCATCGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWATLAQL*GHRSRD
Trigger: GTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGT...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGGCGGCGGGGGACTGTaGACAGAGCCCCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLGGGGL*TEPLLR
Trigger: CCGGAGAAGGGGCTCTGTCCACAGTCCCCCGCCGCC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTACATGCTGGTCCCATGTaGGCCACCTGGCGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLHAGPM*ATWRRG
Trigger: CCCCCGCCGCCAGGTGGCCCACATGGGACCAGCATG...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGTGCCACGGGGCCACTaGATTCACTCGAGACTTAAC +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTVPRGH*IHSRLN
Trigger: GTTAAGTCTCGAGTGAATCCAGTGGCCCCGTGGCAC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp TCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGCCTCGGAGGCGCTGTTaGGGTAGCCCTCGTTCACGA +
Preference number: 4 (lower is better)
Translates to: SVPSFSGLSLGLETCHWLPRRRC*GSPRSR
Trigger: TCGTGAACGAGGGCTACCTCAACAGCGCCTCCGAGG...CAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTGGTACAGCAGGCAGGTaGGGAAGGCGAGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASGTAGR*GRRARP
Trigger: TGGGCGTGCTCGCCTTCCTCACCTGCCTGCTGTACC...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACATTTACACTCACCCTATaGCCAAGCCACGGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTFTLTL*PSHGVA
Trigger: GGCTACACCGTGGCTTGGTCATAGGGTGAGTGTAAA...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGACTGCCAGAGCAGGGTaGCAGCCCCCAGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGTARAG*QPPVSC
Trigger: ACAGGACACTGGGGGCTGTCACCCTGCTCTGGCAGT...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAACCCTGCCCTCCGGCTaGGGATCACCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRTLPSG*GSPAAG
Trigger: GCCAGCTGCTGGTGATCCTCAGCCGGAGGGCAGGGT...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGAGAAGACCTGACTCCTaGACCTCTCCCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTRRPDS*TSPSVL
Trigger: AAGCACAGAGGGAGAGGTTCAGGAGTCAGGTCTTCT...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGGATCCCCGAGGCTTTaGAGATCAAGAATCACCAGG +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTGSPRL*RSRITR
Trigger: CCTGGTGATTCTTGATCTTCAAAGCCTCGGGGATCC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAACGGTCAGGCTCCAGGTaGAGATGGAGAAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQRSGSR*RWRKRR
Trigger: TCTCCTTTTTCTCCATCTTCACCTGGAGCCTGACCG...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR TCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGGAAGCTTAGGTCCTTaGATCTCCGCACGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRGSLGP*ISARPG
Trigger: CCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp GGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCGGAAGCTTAGGTCCTTaGATCTCCGCACGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCAEAGNSVLYSSWKLRSGSLGP*ISARPG
Trigger: CCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCC...GGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTAGACCAGGAGCCCTGTaGCATCCTCGGCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSRPGAL*HPRPGC
Trigger: GCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCT...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGTGCAGGCGTTGGGGTTaGGGTTGTAGATGCAGAACT +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTCRRWG*GCRCRT
Trigger: AGTTCTGCATCTACAACCGCAACCCCAACGCCTGCA...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACATCCAGTGGCCATTTCTaGCAATGTCACCACCCATGC +
Preference number: 4 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTSSGHF*QCHHPC
Trigger: GCATGGGTGGTGACATTGGCAGAAATGGCCACTGGA...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGGAAGAGCACGTGGTCTaGAGTCGGGCAGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGEEHVV*SRAAWA
Trigger: AGCCCAGGCTGCCCGACTGCAGACCACGTGCTCTTC...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGGGCCCGTCCACCACCTaGTCTGCTCTGCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQGPSTT*SALLPE
Trigger: TTCAGGGAGCAGAGCAGAGCAGGTGGTGGACGGGCC...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGGTCCTCTCCATCACTaGTGTCCTTTGGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTGPLHH*CPLGGL
Trigger: AAGTCCTCCCAAAGGACAGCAGTGATGGAGAGGACC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCGCTTACCTGGTACCCTaGCCTCCGGCTGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPAYLVP*PPAEDH
Trigger: GTGATCCTCAGCCGGAGGGCAGGGTACCAGGTAAGC...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp ACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TAVKGEAIALHPQLSNGDALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...GTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGCACTAGGCTGCTCCTaGCACCTCACTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSALGCS*HLTARG
Trigger: ACCCCTGGCAGTGAGGTGGCAGGAGCAGCCTAGTGC...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAAGGCTGATGAGGCGCTaGGCAGGGCAGCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRRLMRR*AGQPGQ
Trigger: CTGCCCAGGCTGCCCTGCCCAGCGCCTCATCAGCCT...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCATGGTAGGAGGTGGGTaGCCAGGGAAGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGMVGGG*PGKSTW
Trigger: CCACGTGCTCTTCCCTGGCCACCCACCTCCTACCAT...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCGCCCAGGAGCCGACCTaGCTGATTCCAAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPAQEPT*LIPKPC
Trigger: ACAGGGCTTTGGAATCAGCCAGGTCGGCTCCTGGGC...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGGCCCCTTCTCCGGATTaGAAAATGAAGTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGAPSPD*KMKSAT
Trigger: TGTTGCTGACTTCATTTTCCAATCCGGAGAAGGGGC...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGAATCAAAGGGGTCTTaGGCCAAGGTTAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTESKGS*AKVRGL
Trigger: GAGACCCCTAACCTTGGCCCAAGACCCCTTTGATTC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CGGCCTCTGCAAGCCGGGGAGGCCTACGGCTGTGCCGAGGCAGGGAACAGTGTGGTGCTGTACTCCTCCTaGAAGCTTAGGTCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: RPLQAGEAYGCAEAGNSVVLYSS*KLRSLN
Trigger: ATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCAC...CACACTGTTCCCTGCCTCGGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCAGCCTGTGGGCTCCTaGAGCCAAGGACCCCACCTA +
Preference number: 4 (lower is better)
Translates to: MRTEPDQEPCDILGQDANQPVGS*SQGPHL
Trigger: TAGGTGGGGTCCTTGGCTCCAGGAGCCCACAGGCTG...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAAGCCGAACACCACTATaGAGAACAGCTCACATCCGG +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQSRTPL*RTAHIR
Trigger: CCGGATGTGAGCTGTTCTCCATAGTGGTGTTCGGCT...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS-3UTR TCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGAGAAGGCAGAAGACCTaGCTCCTGAACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRRRQKT*LLNLSL
Trigger: GAGGGAGAGGTTCAGGAGTCAGGTCTTCTGCCTTCT...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCAGGCAGGACAGTCTGTaGCTGCCCAGGATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSRQDSL*LPRMSQ
Trigger: TTGGCTCATCCTGGGCAGTCACAGACTGTCCTGCCT...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAAGTCAGTGGAGAACCTaGATTGGTTCCTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQSQWRT*IGSSSQ
Trigger: CTGGCTTGAGGAACCAATTCAGGTTCTCCACTGACT...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS-3UTR TCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGAGACCAGGAGCCCTGTaGCATCCTCGGCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQRPGAL*HPRPGC
Trigger: GCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCT...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGGTTGCGGTTGTAGATaGAGAACTCCTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRGCGCR*RTPPPR
Trigger: CCGAGGGGGAGGAGTTCTGCATCTACAACCGCAACC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCGGTTGCGGTTGTAGATaGAGAACTCCTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RPFVQWVVLGLGDLPLVGGCGCR*RTPPPR
Trigger: CCGAGGGGGAGGAGTTCTGCATCTACAACCGCAACC...GCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGCCCTGGGATATACTTaGACATACGTAGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTALGYT*TYVDSP
Trigger: GGGACTGTCTACGTATGTGCAAGTATATCCCAGGGC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCGACCACGAAGGGGTTTaGTGGAGCCCCCTGGAACAA +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGDHEGV*WSPLEQ
Trigger: TTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTC...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCTTGACAGCTTTCCCTaGCTAGGGTGGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGLDSFP*LGWQAG
Trigger: CCCTGCCTGCCACCCTAGGCAGGGAAAGCTGTCAAG...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCCCAGGGGCTGTCCTCTaGCAACAGAAGGAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPPGAVL*QQKERV
Trigger: AACTCGCTCCTTCTGTTGGCAGAGGACAGCCCCTGG...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGAGTGTCAGGTCAAGTaGATCGCTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRECQVK*IAGRQP
Trigger: CGGCTGCCTCCCAGCGATGCACTTGACCTGACACTC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCCTTTCTGGCACTAGGCTaGTCCTGCCACCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: VPSFSGLSLGLETCHWLAFLALG*SCHLTA
Trigger: GGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAA...GGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGAGCCTTCCACTGCCCTaGATGCCCTGGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLSLPLP*MPWHLG
Trigger: TCCAAGATGCCAGGGCATGCAGGGCAGTGGAAGGCT...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGGCTCACATCCGGGCCTaGTCCTCCAGCTCACCCACG +
Preference number: 4 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPAHIRA*SSSSPT
Trigger: CGTGGGTGAGCTGGAGGAGCAGGCCCGGATGTGAGC...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAACACGACGCGCAGGATaGTGTGCGGCTGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRTRRAG*CAAAGP
Trigger: TGGTCCGGCAGCCGCACACCATCCTGCGCGTCGTGT...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAAGCCGAACACCACTATaGAGAACAGCCAAGACACGA +
Preference number: 4 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQSRTPL*RTAKTR
Trigger: TCGTGTCTTGGCTGTTCTCCATAGTGGTGTTCGGCT...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000415332.1
CDS-3UTR CCA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGAGACCTGCCACTGGTTaGCCAGGTAGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRRPATG*PGSRIP
Trigger: TGGGATTCTGCTACCTGGCCAACCAGTGGCAGGTCT...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CGTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTGGTTGTCCTTGGGCTTaGAGACCTGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RPSLRSVGCPWAWRPATGGCPWA*RPATGW
Trigger: CCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACC...ACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCCAATCTGGTACCGCTaGAAGGCCAGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQPIWYR*KASTAW
Trigger: CCAGGCTGTGCTGGCCTTCCAGCGGTACCAGATTGG...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCGAGTCGGCGCCAATCTaGTACCGCTGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSESAPI*YRWKAS
Trigger: GCTGGCCTTCCAGCGGTACCAGATTGGCGCCGACTC...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGAGGCTGGCTCCACAGTaGGCCTTCTGGAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGRLAPQ*AFWKAK
Trigger: CTTGGCCTTCCAGAAGGCCCACTGTGGAGCCAGCCT...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAAACCTGCCCCCATGCTaGTCCCATGTGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQNLPPC*SHVGHL
Trigger: CAGGTGGCCCACATGGGACCAGCATGGGGGCAGGTT...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGATACCGGACAGAGTTaGGCCTGGGGTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQDTGQS*AWGSPG
Trigger: CCCTGGGGAACCCCAGGCCCAACTCTGTCCGGTATC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGGTAGGGGAGGGCAGCTaGGAGGAAAAGGGATACCGG +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGVGEGS*EEKGYR
Trigger: CCGGTATCCCTTTTCCTCCCAGCTGCCCTCCCCTAC...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAGGTCAAGTGCATCGCTaGGAGGCAGCCGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRGQVHR*EAAGPV
Trigger: GACTGGGCCGGCTGCCTCCCAGCGATGCACTTGACC...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 72 bp AACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTaGAATCTCCGCACGGCCAGGGCTGCGGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NSVLYSSWKLRS*NLRTARAAVRL
Trigger: GAGCCTGACCGCAGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACCTCGGAGGCGCTGTTaGGGTAGCCCTCGTTCACGA +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHEPRRRC*GSPRSR
Trigger: TCGTGAACGAGGGCTACCTCAACAGCGCCTCCGAGG...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCCTGGCCCGCCCAGGTaGAGATGGAGAAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQPGPPR*RWRKRR
Trigger: TCTCCTTTTTCTCCATCTTCACCTGGGCGGGCCAGG...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGAGGAGCCGACCTGGCTaGTTCCAAAGCCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQRSRPG*FQSPVL
Trigger: AAGGACAGGGCTTTGGAATCAGCCAGGTCGGCTCCT...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGCTCCGGATTGGAAAATaGAGTCAGCAACAACCAGCT +
Preference number: 4 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTLRIGK*SQQQPA
Trigger: AGCTGGTTGTTGCTGACTTCATTTTCCAATCCGGAG...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTCAGCAATGGGGACCATaGACGCCTCTAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASQQWGP*TPLGSP
Trigger: TGGGCTGCCTAGAGGCGTTCATGGTCCCCATTGCTG...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGGTTGCGGTTGTAGATaGAGAACTCCTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSGCGCR*RTPPPR
Trigger: CCGAGGGGGAGGAGTTCTGCATCTACAACCGCAACC...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGTTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLLTLLI*GKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAA...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCCGTCAGGGCCAGCTTTaGCACTCACTCACCGTGACC +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSRQGQL*HSLTVT
Trigger: GGTCACGGTGAGTGAGTGGCAAAGCTGGCCCTGACG...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGAGGAAACACCTCTCATaGGCTTGGCTGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGRKHLS*AWLLQP
Trigger: GGGCTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCT...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGAAGAGCCCACCTTGTaGAAGAATCGACCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFREEPTL*KNRPAP
Trigger: GGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGTTTCTGGCACTAGGCTaGTCCTGCCACCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWFLALG*SCHLTA
Trigger: GGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAA...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTTTTCTGGCACTAGGCTaGTCCTGCCACCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSFLALG*SCHLTA
Trigger: GGCAGTGAGGTGGCAGGAGCAGCCTAGTGCCAGAAA...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGGCTAGCCTTCCACTGCCCTaGATGCCCTGGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLYSSWKLRSLNLRTARASLPLP*MPWHLG
Trigger: TCCAAGATGCCAGGGCATGCAGGGCAGTGGAAGGCT...AGCCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp AGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGAATCTCCGCACGGCCAGGAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SVLYSSWKLRSLNLRTARKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGAGCCCTCGTTCACGATaGAGCCGAACACCACTATGG +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRSPRSR*SRTPLW
Trigger: CCATAGTGGTGTTCGGCTCCATCGTGAACGAGGGCT...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGGGTTGTCCTTGGGCTTaGAGACCTGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGGCPWA*RPATGW
Trigger: CCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACC...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGTCAGTGGGTTGTCCTTaGGCTTGGAGACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRSVGCP*AWRPAT
Trigger: AGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGA...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGRPFVQ*VVLGLG
Trigger: TCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRRPFVQ*VVLGLG
Trigger: TCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAAAGGCCAGCACAGCCTaGCCCGCCCAGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLKASTA*PAQVKM
Trigger: CATCTTCACCTGGGCGGGCCAGGCTGTGCTGGCCTT...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGGCAGGCGGTCACTGTaGCTCAGTAGCCCTGCGACT +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLGRRSL*LSSPAT
Trigger: AGTCGCAGGGCTACTGAGCCACAGTGACCGCCTGCC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTCTCCCATAAACTCCTaGGAGGGGCATTCCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWASPINS*EGHSPF
Trigger: AAAGGGGGAATGCCCCTCCCAGGAGTTTATGGGAGA...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTGAAGGGAAGCTTAGGTCCTTaGATCTCCGCACGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQDANPKDSEVTLHTAVKGSLGP*ISARPG
Trigger: CCCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCC...CTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGAGGCGGTGAAGGAATaGATGAGTCAGTGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLREAVKE*MSQWRT
Trigger: GGTTCTCCACTGACTCATTCATTCCTTCACCGCCTC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp CGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCGAGGCGGTGAAGGAATaGATGAGTCAGTGGAGAACC +
Preference number: 4 (lower is better)
Translates to: RPFVQWVVLGLGDLPLVGEAVKE*MSQWRT
Trigger: GGTTCTCCACTGACTCATTCATTCCTTCACCGCCTC...GCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR TCA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTGGGTCACATAGCACATaGGGACAGAGCCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASGSHST*GQSQTR
Trigger: CCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCC...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGGTTGCGGTTGTAGATaGAGAACTCCTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQGCGCR*RTPPPR
Trigger: CCGAGGGGGAGGAGTTCTGCATCTACAACCGCAACC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGTGCAGGCGTTGGGGTTaGGGTTGTAGATGCAGAACT +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLCRRWG*GCRCRT
Trigger: AGTTCTGCATCTACAACCGCAACCCCAACGCCTGCA...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GGCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTGCAGGCGTTGGGGTTaGGGTTGTAGATGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GCAEAGNSVLYSSWKLRSCRRWG*GCRCRT
Trigger: AGTTCTGCATCTACAACCGCAACCCCAACGCCTGCA...GGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTACCCCTGCGGGGCACATaGCCTGGGATATACTTGCAC +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLPLRGT*PGIYLH
Trigger: GTGCAAGTATATCCCAGGGCATGTGCCCCGCAGGGG...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGACTGGGCCCTCTCTTGTaGTTGATGGGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRLGPLL*LMGRRE
Trigger: CTCCCTCCTCCCCATCAAGCACAAGAGAGGGCCCAG...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGTGTCATAAAGGAGGGTaGCACGGGGCCACTGGATTC +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQCHKGG*HGATGF
Trigger: GAATCCAGTGGCCCCGTGGCACCCTCCTTTATGACA...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGAGGCAGGGAACAGTGTaGTGTACTCCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RVCQGHIAHEDRARPGALRQGTV*CTPPGS
Trigger: GCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCT...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GCTGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTAGGCAGGGAACAGTGTaGTGTACTCCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AVPRQGTVCCTPPGSLGPRQGTV*CTPPGS
Trigger: GCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCT...AGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGTTCCACTGCCCTGCATaGCCTGGCATCTTGGACATT +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRFHCPA*PGILDI
Trigger: AATGTCCAAGATGCCAGGGCATGCAGGGCAGTGGAA...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAAAGCCAGCCTTCCACTaGCCTGCATGCCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHEKPAFH*PACPGI
Trigger: GATGCCAGGGCATGCAGGGCAGTGGAAGGCTGGCTT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGCATAGCTGCAGGCGTTaGGGTTGCGGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWHSCRR*GCGCRC
Trigger: GCATCTACAACCGCAACCCCAACGCCTGCAGCTATG...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp TCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGCATAGCTGCAGGCGTTaGGGTTGCGGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: SVPSFSGLSLGLETCHWLHSCRR*GCGCRC
Trigger: GCATCTACAACCGCAACCCCAACGCCTGCAGCTATG...CAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCGGTTGTCCTTGGGCTTaGAGACCTGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: MNASRQPMYGAATYLVTVGCPWA*RPATGW
Trigger: CCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACC...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGCGTCCCTTCGTTCAGTaGGTTGTCCTTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RVCQGHIAHEDRARPGALRPFVQ*VVLGLG
Trigger: TCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGCCCCCAGTGTCCTGTaGGTGTTTACACTCACCCTA +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRAPSVL*VFTLTL
Trigger: TAGGGTGAGTGTAAACACCCACAGGACACTGGGGGC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCTTTGCTGGAGCCCCCTaGAACAAGCGTCTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSFAGAP*NKRLWD
Trigger: GTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAA...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTCCAGTGGACACTGGGTaGACAGGGGGATGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PTSITSCLSDSGQVILTSPVDTG*TGGWAP
Trigger: GGGGGCCCATCCCCCTGTCCACCCAGTGTCCACTGG...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAGACCACCCATGCCCTTaGTATCTCCAGCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: WTVGEGQNISQPLVVGTEDHPCP*YLQHRG
Trigger: GCCCCTGTGCTGGAGATACCAAGGGCATGGGTGGTC...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGACTCTCATCTCCATCCTaGGCAGGTCCCTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRLSSPS*AGPCQS
Trigger: GCTCTGGCAGGGACCTGCCCAGGATGGAGATGAGAG...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGGTGTCTCAGTTACATaGGGAAACCTGGGATCCCCG +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRGVSVT*GNLGSP
Trigger: CGGGGATCCCAGGTTTCCCCATGTAACTGAGACACC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCCATGCCCTGGCATCTTaGACATTTCTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: RPFVQWVVLGLGDLPLVGHALAS*TFLALG
Trigger: GCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATG...GCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
3UTR CAA 72 bp GACCTGACTCCTGAACCTCTCCCTCTGTGCTTGACCTaGGACAAGTCGCTGTCTCCCTACCCCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: DLTPEPLPLCLT*DKSLSPYPRLC
Trigger: GCAGAGTCTGGGGTAGGGAGACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAGGTTCAGGAGTCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCCTCTCCCTCTGTGCTTaGCCTTGGACAAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSLSLCA*PWTSRC
Trigger: ACAGCGACTTGTCCAAGGTCAAGCACAGAGGGAGAG...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGACTCTAAGGTCAACATaGGACCAAGGAGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLTLRST*DQGGMP
Trigger: AGGCATGCCTCCTTGGTCTCATGTTGACCTTAGAGT...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS-3UTR GCA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGAGGCTATTGCTCTaGACCCACAGCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: PDQEPCDILGQDANPKDSERLLL*THSSAM
Trigger: CATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CGGGTTTGTCAGGGTCACATAGCACATGAGGACAGAGCCAGACCAGGAGCCCTGGAGAGGCTATTGCTCTaGACCCACAGCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RVCQGHIAHEDRARPGALERLLL*THSSAM
Trigger: CATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC...CAGGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCGAAGGGAGAGGCTATTaGTCTGCACCCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: MNASRQPMYGAATYLVTVEGRGY*SAPTAQ
Trigger: CTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTC...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCAGCCGAACACCACTATaGAGAACAGCCAAGACACGA +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSSRTPL*RTAKTR
Trigger: TCGTGTCTTGGCTGTTCTCCATAGTGGTGTTCGGCT...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGAGCCCTCGTTCACGATaGAGCCGAACACCACTATGG +
Preference number: 4 (lower is better)
Translates to: CAEAGNSVLYSSWKLRSLSPRSR*SRTPLW
Trigger: CCATAGTGGTGTTCGGCTCCATCGTGAACGAGGGCT...CAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTAGACCTGCCACTGGTTaGCCAGGTAGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFRPATG*PGSRIP
Trigger: TGGGATTCTGCTACCTGGCCAACCAGTGGCAGGTCT...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGTCAGTGGGTTGTCCTTaGGCTTGGAGACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQSVGCP*AWRPAT
Trigger: AGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGA...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCTCAGTGGGTTGTCCTTaGGCTTGGAGACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSSVGCP*AWRPAT
Trigger: AGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGA...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCGCTCCCCTTTCCAGTaGCCATTTCTGCCAATGTCA +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQRSPFQ*PFLPMS
Trigger: TGACATTGGCAGAAATGGCCACTGGAAAGGGGAGCG...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTATTGCCTGTGTCATCCTaGGGGCAGTGTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLLPVSS*GQCLST
Trigger: CGTGGAGAGACACTGCCCCCAGGATGACACAGGCAA...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGCACAGCCTCTTGTGGTaGGCACAGAACTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQHSLLW*AQNFTL
Trigger: CAGAGTGAAGTTCTGTGCCCACCACAAGAGGCTGTG...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCGCTTTTGGTGGACAGTaGGTGAGGGTCAGAACATCT +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGAFGGQ*VRVRTS
Trigger: AGATGTTCTGACCCTCACCCACTGTCCACCAAAAGC...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAAGGATCACCAGCAGCTaGCTGGCACCCGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: WTVGEGQNISQPLVVGTERITSS*LAPEEK
Trigger: TTTCTCCTCGGGTGCCAGCCAGCTGCTGGTGATCCT...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGAGGAGTTAAGCTTACCTaGTACCCTGCCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRGVKLT*YPALRL
Trigger: CAGCCGGAGGGCAGGGTACCAGGTAAGCTTAACTCC...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCTCTTTCCCTTAACTCTGGCCCAGCTTTGGGGCCATCGAAGCAGGGACCACCCTTACATGGGGAAACCTaGGATCCCCGAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PLSLNSGPALGPSKQGPPLHGET*DPRGFE
Trigger: TTCAAAGCCTCGGGGATCCCAGGTTTCCCCATGTAA...GGGTGGTCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTTAAGGGAAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp ATGGGGACCATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGCTTGTGCTAAGCCCTaGGCTGGCCTTTGTTTCATT +
Preference number: 4 (lower is better)
Translates to: MGTMNASRQPMYGAATYLACAKP*AGLCFI
Trigger: AATGAAACAAAGGCCAGCCCAGGGCTTAGCACAAGC...CAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCATGGTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGCTTGTGCTAAGCCCTaGGCTGGCCTTTGTTTCATT +
Preference number: 4 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRACAKP*AGLCFI
Trigger: AATGAAACAAAGGCCAGCCCAGGGCTTAGCACAAGC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CAA 72 bp GACAGTGATCAGTCCTTTGAGAGACCACGAAGGGGTTaGCTGGAGCCCCCTGGAACAAGCGTCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: DSDQSFERPRRG*LEPPGTSVCGT
Trigger: TGTCCCACAGACGCTTGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 72 bp CCTCCCTGTCCCTTATGGCTCAGTGAAGAGCCCACCTaGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PPCPLWLSEEPT*CKNRPAPTQKR
Trigger: TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAGCCATAAGGGACAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACTCTTCACACCGCTGTaGAGGGAGAGGCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHELFTPL*RERLLL
Trigger: GAGCAATAGCCTCTCCCTTCACAGCGGTGTGAAGAG...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTTGCAGGCGTTGGGGTTaGGGTTGTAGATGCAGAACT +
Preference number: 4 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFCRRWG*GCRCRT
Trigger: AGTTCTGCATCTACAACCGCAACCCCAACGCCTGCA...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGGTGCAAGAATCGACCTaGCCCCACTCAGAAGAGATT +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQVQEST*PHSEEI
Trigger: AATCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCAC...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCCACAGAACTTCACTCTaGCATAAACACTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSHRTSL*HKHSCP
Trigger: AGGGCAGGAGTGTTTATGGCAGAGTGAAGTTCTGTG...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGAACCTCTCCCTCTGTaGTTGACCTTGGACAAGTCG +
Preference number: 4 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQEPLPL*LTLDKS
Trigger: CGACTTGTCCAAGGTCAAGCACAGAGGGAGAGGTTC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAAGGCAGGGAACAGTGTaGTGTACTCCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHERQGTV*CTPPGS
Trigger: GCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGTTCCACTGCCCTGCATaGCCTGGCATCTTGGACATT +
Preference number: 4 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQFHCPA*PGILDI
Trigger: AATGTCCAAGATGCCAGGGCATGCAGGGCAGTGGAA...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAGAAGGGAGAGGCTATTaGTCTGCACCCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHEEGRGY*SAPTAQ
Trigger: CTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTC...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GTCCGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTAGCCGAACACCACTATaGAGAACAGCCAAGACACGA +
Preference number: 4 (lower is better)
Translates to: VRPFVQWVVLGLGDLPLVSRTPL*RTAKTR
Trigger: TCGTGTCTTGGCTGTTCTCCATAGTGGTGTTCGGCT...AACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAAGACCTGCCACTGGTTaGCCAGGTAGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHERPATG*PGSRIP
Trigger: TGGGATTCTGCTACCTGGCCAACCAGTGGCAGGTCT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCTCCTTTGGGAGGACTTaGACACACCTGAGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWASFGRT*THLSLD
Trigger: ATCTAAACTCAGGTGTGTCCAAGTCCTCCCAAAGGA...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGATCACTGCTGTCCTTTaGGAGGACTTGGACACACCT +
Preference number: 4 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQITAVL*EDLDTP
Trigger: AGGTGTGTCCAAGTCCTCCCAAAGGACAGCAGTGAT...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAATCACGCCCTCACCTTTaGCCTGGTACAGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQSRPHL*PGTGFT
Trigger: AGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGA...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAAGGAGAGGCTTTTGGTaGACAGTGGGTGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLRRGFW*TVGEGQ
Trigger: CTGACCCTCACCCACTGTCCACCAAAAGCCTCTCCT...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAGGGGAAGATCATGCCTaGAAGGGCTTCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLGEDHA*KGFWAE
Trigger: TTCAGCCCAGAAGCCCTTCCAGGCATGATCTTCCCC...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCCTAACGTCAGTCCCCTaGGAATTAGCCCCTCAACTG +
Preference number: 4 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSLTSVP*ELAPQL
Trigger: CAGTTGAGGGGCTAATTCCCAGGGGACTGACGTTAG...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTCATGCCCTGGCATCTTaGACATTTCTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFHALAS*TFLALG
Trigger: GCCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATG...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp GCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTGGCTCAGTTCAGGTAAGTaGACTGAGGCTGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AHVWGRYLPGNCPRLSIWLSSGK*TEAERG
Trigger: ACCTCTCTCAGCCTCAGTCCACTTACCTGAACTGAG...CCAAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CAA 72 bp GGGGTCCTCTCCATCACTGCTGTCCTTTGGGAGGACTaGGACACACCTGAGTTTAGATCCGTGTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GVLSITAVLWED*DTPEFRSVFHC
Trigger: GCAGTGGAACACGGATCTAAACTCAGGTGTGTCCAAGTCCTCCCAAAGGACAGCAGTGATGGAGAGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGGAGCGAGTTTCCCCATaGACCTTCCAGGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRERVSP*TFQGRV
Trigger: GACTCTGCCCTGGAAGGTTCATGGGGAAACTCGCTC...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR TCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGGTCAGGCTCCAGGTaGAGATGGAGAAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHERSGSR*RWRKRR
Trigger: TCTCCTTTTTCTCCATCTTCACCTGGAGCCTGACCG...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCGGTCAGGCTCCAGGTaGAGATGGAGAAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPRSGSR*RWRKRR
Trigger: TCTCCTTTTTCTCCATCTTCACCTGGAGCCTGACCG...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR GCA 90 bp CCTGCCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGGACACAATGTATGAATaGAAATACCCCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PALTHALTFGLVQVSLFRDTMYE*KYPWPP
Trigger: TGGGGGCCAGGGGTATTTGCATTCATACATTGTGTC...CCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTCCAAAGCCCTGTCCTTaGCGCTCTGCCTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: PTSITSCLSDSGQVILTSPKPCP*RSASHR
Trigger: CCTATGGGAGGCAGAGCGGCAAGGACAGGGCTTTGG...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGGGCCAACAGATAACCTaGCCCCATGCTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRGQQIT*PHAGPM
Trigger: CATGGGACCAGCATGGGGGCAGGTTATCTGTTGGCC...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCCTTCCCAGCATTATCTaGATCTGTCTTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGLPSII*ICLSHH
Trigger: ATGGTGGGAAAGACAGATCCAGATAATGCTGGGAAG...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTGCCTGGAAGGGCTTCTaGGCTGAACCCGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PTSITSCLSDSGQVILTSAWKGF*AEPGKS
Trigger: ACTCTTCCCGGGTTCAGCCCAGAAGCCCTTCCAGGC...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp ACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACGTGCTGTACTCCTCCTaGAAGCTTAGGTCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TAVKGEAIALHPQLSNGDVLYSS*KLRSLN
Trigger: ATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCAC...GTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CAA 72 bp CCCTGGGCTGGCCTTTGTTTCATTGGCACAACAGCCTaGAGAGGTTGGTCCATTATCACCCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PWAGLCFIGTTA*RGWSIITPQFR
Trigger: CCTGAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTGTGCCAATGAAACAAAGGCCAGCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR TCA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTCCAGCTGCCTATCCATaGAGGATCGAATTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFPAAYP*RIEFQN
Trigger: ATTCTGGAATTCGATCCTTCATGGATAGGCAGCTGG...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS-3UTR TCA 90 bp TGTGCCGAGGCAGGGAACAGTGTGCTGTACTCCTCCTGGAAGCTTAGGTCCTTGGCTCATTTCCTCATCTaGAACATGGGAAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CAEAGNSVLYSSWKLRSLAHFLI*NMGRRV
Trigger: CACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGC...CAAGGACCTAAGCTTCCAGGAGGAGTACAGCACACTGTTCCCTGCCTCGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR GCA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAACCTCTGTGTCCAGCTaGCTATCCATGAAGGATCGA +
Preference number: 4 (lower is better)
Translates to: VKGEAIALHPQLSNGDHETSVSS*LSMKDR
Trigger: TCGATCCTTCATGGATAGGCAGCTGGACACAGAGGT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS-3UTR CCA 90 bp CTCAGTGAAGAGCCCACCTTGTGCAAGAATCGACCTGCCCCCACTCAGAAGAGACTCCAAGGAAAGCTTTaGGAGCAAGGGAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSEEPTLCKNRPAPTQKRLQGKL*EQGRSR
Trigger: CCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAG...TCTCTTCTGAGTGGGGGCAGGTCGATTCTTGCACAAGGTGGGCTCTTCACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCTTGGTTCACCACAGATaGATGGATGTCATAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGLVHHR*MDVIKE
Trigger: CTCCTTTATGACATCCATCCATCTGTGGTGAACCAA...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp GTCTCCCTACCCCAGACTCTGCCGACTCTAAGCGTCCTTGCGACTCTACACTTAACCTCTATCACTAGCTaGCTGAGTGATTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VSLPQTLPTLSVLATLHLTSITS*LSDSGQ
Trigger: TTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGT...TAAGTGTAGAGTCGCAAGGACGCTTAGAGTCGGCAGAGTCTGGGGTAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR GCA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAGCATTCCCCCTTTCGTaGTCCTTAGAGAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: WTVGEGQNISQPLVVGTEAFPLS*SLENQR
Trigger: CCTTTGATTCTCTAAGGAGCACGAAAGGGGGAATGC...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp GGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTGAAGGTGCTGTACTCCTCCTaGAAGCTTAGGTCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GQDANPKDSEVTLHTAVKVLYSS*KLRSLN
Trigger: ATTCAAGGACCTAAGCTTCCAGGAGGAGTACAGCAC...CTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp ACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGTGGCCTTTGTTTCATTaGCACAACAGCCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSSARMLTLRTVRSLFTPWPLFH*HNSLER
Trigger: CCTCTCAAGGCTGTTGTGCCAATGAAACAAAGGCCA...CGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CCA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGGTCACCACCTTCACTTaGTTCACCACAGATGGATGG +
Preference number: 4 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRVTTFT*FTTDGW
Trigger: CCATCCATCTGTGGTGAACCAAGTGAAGGTGGTGAC...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTCCCTCACCTTTGGCCTaGTACAGGTTTCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTSITSCLSDSGQVILTSPSPLA*YRFHSS
Trigger: TGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGG...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CCA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTTCTCACAGCCTCTTGTaGTGGGCACAGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: PTSITSCLSDSGQVILTSSHSLL*WAQNFT
Trigger: AGTGAAGTTCTGTGCCCACCACAAGAGGCTGTGAGA...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
3UTR CAA 72 bp TGGCCTTTGTTTCATTGGCACAACAGCCTTGAGAGGTaGGTCCATTATCACCCCTCAGTTCAGGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: WPLFHWHNSLER*VHYHPSVQVSG
Trigger: TCCACTTACCTGAACTGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTTGTGCCAATGAAACAAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
3UTR CAA 72 bp CTTTATTACTATGTCACCAGAAGTCACCACCTTCACTaGGTTCACCACAGATGGATGGATGTCATAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LYYYVTRSHHLH*VHHRWMDVIKE
Trigger: CTCCTTTATGACATCCATCCATCTGTGGTGAACCAAGTGAAGGTGGTGACTTCTGGTGACATAGTAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 90 bp CCGGCTGCTGGTAGGTGCCGCCCATACCGGCGGGATCCGGCCCAGTaGGCTCCACGTAGGGCGCGTAAGGCATGCTGGAGTCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PAAGRCRPYRRDPAQ*APRRARKACWSPGW
Trigger: CCAGCCAGGACTCCAGCATGCCTTACGCGCCCTACGTGGAGCCCACTGGGCCGGATCCCGCCGGTATGGGCGGCACCTACCAGCAGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 90 bp AGTAGCCCTGCGACTGGTAGCCCTGGGGCTCGGTGTCGAAGGTGTTaGCCGGCTGCTGGTAGGTGCCGCCCATACCGGCGGGATCCGGCC +
Preference number: 5 (lower is better)
Translates to: SSPATGSPGARCRRC*PAAGRCRPYRRDPA
Trigger: GGCCGGATCCCGCCGGTATGGGCGGCACCTACCAGCAGCCGGCCAACACCTTCGACACCGAGCCCCAGGGCTACCAGTCGCAGGGCTACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAAAGGCGCCCCCGGCTTaGCCCGCTCCGTACGCACCC +
Preference number: 5 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQKAPPA*PAPYAP
Trigger: GGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCTT...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000415332.1
CDS GCA 90 bp CGGCGGGATCCGGCCCAGTGGGCTCCACGTAGGGCGCGTAAGGCATaGTGGAGTCCTGGCTGGGGTCCATGTAGTCCTGGGAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: RRDPAQWAPRRARKA*WSPGWGPCSPGRRG
Trigger: CCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTACGCGCCCTACGTGGAGCCCACTGGGCCGGATCCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 90 bp CGGGATCCGGCCCAGTGGGCTCCACGTAGGGCGCGTAAGGCATGCTaGAGTCCTGGCTGGGGTCCATGTAGTCCTGGGAGAAGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: RDPAQWAPRRARKAC*SPGWGPCSPGRRGP
Trigger: CGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTACGCGCCCTACGTGGAGCCCACTGGGCCGGATCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp CTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCCGGGGAGGCCTACGGCGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LPGVIQGCRPLQAGEAYGDRTAF*RSLTLL
Trigger: CAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTC...GCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS GCA 90 bp CCTATGGCCGGGACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTaGTGGGTGGGGCTCACCCGAGACACCGATGTCGGACAGGACGGC +
Preference number: 5 (lower is better)
Translates to: PMAGTALCRLCAGGT*WVGLTRDTDVGQDG
Trigger: GCCGTCCTGTCCGACATCGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGTCCCGGCCATAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS-3UTR CAA 90 bp GAGCACAGAGCAGCACCCGGGGTGAGCCCTCTTGGAGGAGGCCAAGGGCCAGGGGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGG +
Preference number: 5 (lower is better)
Translates to: EHRAAPGVSPLGGGQGPGAFLRS*TLLICG
Trigger: CCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGC...CCCTGGCCCTTGGCCTCCTCCAAGAGGGCTCACCCCGGGTGCTGCTCTGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 90 bp CAGTGGGCTCCACGTAGGGCGCGTAAGGCATGCTGGAGTCCTGGCTaGGGTCCATGTAGTCCTGGGAGAAGAGGGCCGAGTCGGCGCCAA +
Preference number: 5 (lower is better)
Translates to: QWAPRRARKACWSPG*GPCSPGRRGPSRRQ
Trigger: TTGGCGCCGACTCGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTACGCGCCCTACGTGGAGCCCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTAAGGCGCCCCCGGCTTaGCCCGCTCCGTACGCACCC +
Preference number: 5 (lower is better)
Translates to: PDQEPCDILGQDANPKDSKAPPA*PAPYAP
Trigger: GGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCTT...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318801.8
CDS-3UTR CAA 90 bp TGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACAGCGTCAGGGCCAGCTTaGCCACTCACTCACCGTGAC +
Preference number: 5 (lower is better)
Translates to: WGPRMGTALHRTHTHTHTASGPA*PLTHRD
Trigger: GTCACGGTGAGTGAGTGGCAAAGCTGGCCCTGACGC...TGTGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS TCA 90 bp AGTCCTCATGAGGCTGCCCCAGGGAGGTGGCACAGAAGAGGCCACTaGAACACGGGCCAACCCATGGGGGCTGGCACATGCCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SPHEAAPGRWHRRGH*NTGQPMGAGTCPVP
Trigger: TGGCACTGGGCATGTGCCAGCCCCCATGGGTTGGCCCGTGTTTCAGTGGCCTCTTCTGTGCCACCTCCCTGGGGCAGCCTCATGAGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 90 bp CCGGGACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTGCTGGGTaGGGCTCACCCGAGACACCGATGTCGGACAGGACGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PGQPSVDSVQGVPAG*GSPETPMSDRTAFL
Trigger: CAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CCA 90 bp ATGGCCGGGACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTGCTaGGTGGGGCTCACCCGAGACACCGATGTCGGACAGGACGGCTTT +
Preference number: 5 (lower is better)
Translates to: MAGTALCRLCAGGTC*VGLTRDTDVGQDGF
Trigger: AAAGCCGTCCTGTCCGACATCGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGTCCCGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS-3UTR CAA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCAAGGCGCCCCCGGCTTaGCCCGCTCCGTACGCACCC +
Preference number: 5 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSKAPPA*PAPYAP
Trigger: GGGTGCGTACGGAGCGGGCAAAGCCGGGGGCGCCTT...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp AGGGAAGCCCCAAGCGTGGGGATGGTAGGAGGTGGGTGGCCAGGGAAGAGCACGAACTCTGGCCCAGCTTaGGGGCCATCGAAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: REAPSVGMVGGGWPGKSTNSGPA*GPSKQG
Trigger: TCCCTGCTTCGATGGCCCCAAAGCTGGGCCAGAGTT...CGTGCTCTTCCCTGGCCACCCACCTCCTACCATCCCCACGCTTGGGGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGGGATACCGGACAGAGTaGGGCCTGGGGTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRGYRTE*GLGFPR
Trigger: CCTGGGGAACCCCAGGCCCAACTCTGTCCGGTATCC...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGGGACCACCCATGCCCTaGGTATCTCCAGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRGPPMP*VSPAQG
Trigger: CCCCTGTGCTGGAGATACCAAGGGCATGGGTGGTCC...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp AGTGGGGGCCCAGGATGGGGACCGCCCTTCACCGCACACACACGCACACACACACTCACGCCCTCACCTTaGGCCTGGTACAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SGGPGWGPPFTAHTRTHTLTPSP*AWYRFH
Trigger: GTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAG...TGTGTGTGTGCGTGTGTGTGCGGTGAAGGGCGGTCCCCATCCTGGGCCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS GCA 90 bp GGGCGTCAGCAGTGGGAGCCTCATAGCCACGCAATCTCCTGTGAGTaGCAAGGTCTCCCCAGAGAAGCCCAGACCTGCTCAGGACAAGGC +
Preference number: 5 (lower is better)
Translates to: GRQQWEPHSHAISCE*QGLPREAQTCSGQG
Trigger: GCCTTGTCCTGAGCAGGTCTGGGCTTCTCTGGGGAGACCTTGGCACTCACAGGAGATTGCGTGGCTATGAGGCTCCCACTGCTGACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 90 bp CCCTCAGGCTGCCAGACAAATGAGGTATGGGAAGGAGGACGAGGCTaGGGCAAGGATGGCAGCTTGGCTGGGTGGGTCTGGGCTTCGACT +
Preference number: 5 (lower is better)
Translates to: PSGCQTNEVWEGGRG*GKDGSLAGWVWAST
Trigger: AGTCGAAGCCCAGACCCACCCAGCCAAGCTGCCATCCTTGCCCCAGCCTCGTCCTCCTTCCCATACCTCATTTGTCTGGCAGCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS-3UTR CAA 90 bp CCCCCACTCAGAAGAGATTATGACCTCCTCAGGCCCCACGGCCCTCTTTGGGCCGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PPLRRDYDLLRPHGPLWADRTAF*RSLTLL
Trigger: CAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTC...GGCCCAAAGAGGGCCGTGGGGCCTGAGGAGGTCATAATCTCTTCTGAGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCGCCCCACGGCCCTCTTaGGGCCTTTGGGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSAPRPS*GLWVTC
Trigger: GCAGGTGACCCAAAGGCCCAAAGAGGGCCGTGGGGC...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp TGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAAGCGCATGCCCTGGCATCTaGGACATTTCTGGCACTAGG +
Preference number: 5 (lower is better)
Translates to: CSCHLTARGDTGLPASASACPGI*DISGTR
Trigger: CCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGC...GCTTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318801.8
ENST00000381535.4
ENST00000415332.1
CDS GCA 90 bp ATGTCGGACAGGACGGCTTTCTTGCGGTCCTTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGGGCCAGGTACAGCAGGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: MSDRTAFLRSLTLLI*GKYTSRARYSRQVR
Trigger: CCTCACCTGCCTGCTGTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS-3UTR CAA 90 bp CAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QSQTRSPVTSSARMLTLRDRTAF*RSLTLL
Trigger: CAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTC...CCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp GCTGGGCAGCTGGGGCCAAGAAACCCAGGCGTCAGGGCCAGCTTTGCCACTCACACATCTCACAGCCTCTaGTGGTGGGCACAGAACTTC +
Preference number: 5 (lower is better)
Translates to: AGQLGPRNPGVRASFATHTSHSL*WWAQNF
Trigger: GAAGTTCTGTGCCCACCACAAGAGGCTGTGAGATGT...GTGAGTGGCAAAGCTGGCCCTGACGCCTGGGTTTCTTGGCCCCAGCTGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS TCA 90 bp ACCCTGAGTCCATCCCTTCACCCGCCTGCACCTCATTTCCTCATCTaGAACATGGGAAGAAGGGTGGCAGCCGCCTCCTATGGCCGGGAC +
Preference number: 5 (lower is better)
Translates to: TLSPSLHPPAPHFLI*NMGRRVAAASYGRD
Trigger: GTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGGTGCAGGCGGGTGAAGGGATGGACTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 90 bp CTGATGCCTGCAACTCTGCAGGCAGGAAGACCCCAACCCTCAGGCTaGCAGACAAATGAGGTATGGGAAGGAGGACGAGGCTGGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LMPATLQAGRPQPSG*QTNEVWEGGRGWGK
Trigger: CTTGCCCCAGCCTCGTCCTCCTTCCCATACCTCATTTGTCTGGCAGCCTGAGGGTTGGGGTCTTCCTGCCTGCAGAGTTGCAGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 90 bp GTGGCACAGAAGAGGCCACTGAAACACGGGCCAACCCATGGGGGCTaGCACATGCCCAGTGCCATCCATGGGTCCCTTAGACTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: VAQKRPLKHGPTHGG*HMPSAIHGSLRLEG
Trigger: TCCTTCTAGTCTAAGGGACCCATGGATGGCACTGGGCATGTGCCAGCCCCCATGGGTTGGCCCGTGTTTCAGTGGCCTCTTCTGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS-3UTR CAA 90 bp CGTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCTTCAGTGGGTTGTCCTaGGGCTTGGAGACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RPFVQWVVLGLGDLPLVGFSGLS*GLETCH
Trigger: GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAA...GCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CAA 90 bp CAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGCCCTTCGTTCAGTGGGTaGTCCTTGGGCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: QFCFLGGHKGRESRHLLGPSFSG*SLGLET
Trigger: GGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGG...GCCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGAGACCACGAAGGGGTTaGCTGGAGCCCCCTGGAACA +
Preference number: 5 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQRPRRG*LEPPGT
Trigger: TGTTCCAGGGGGCTCCAGCAAACCCCTTCGTGGTCT...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAACACCTCTCATGCGCTaGGCTGCTGCAGCCCCCGAA +
Preference number: 5 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQTPLMR*AAAAPE
Trigger: TTCGGGGGCTGCAGCAGCCAAGCGCATGAGAGGTGT...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCCCAACTCGCCTATGCTaGCCGAGCCTCAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSPTRLC*PSLSFP
Trigger: AGGGAAACTGAGGCTCGGCAAGCATAGGCGAGTTGG...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS TCA 90 bp AGCCTCAGAACAGCGAGGCTGAAGCCTCGGGTTCGGACCCCTGACTaGGAGCATCCACCAATCAGATTCCTGGAAGTCACGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SLRTARLKPRVRTPD*EHPPIRFLEVTEQR
Trigger: CCTCTGCTCCGTGACTTCCAGGAATCTGATTGGTGGATGCTCTCAGTCAGGGGTCCGAACCCGAGGCTTCAGCCTCGCTGTTCTGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS TCA 90 bp CCCAAGCCTCAGAACAGCGAGGCTGAAGCCTCGGGTTCGGACCCCTaGCTGAGAGCATCCACCAATCAGATTCCTGGAAGTCACGGAGCA +
Preference number: 5 (lower is better)
Translates to: PKPQNSEAEASGSDP*LRASTNQIPGSHGA
Trigger: TGCTCCGTGACTTCCAGGAATCTGATTGGTGGATGCTCTCAGTCAGGGGTCCGAACCCGAGGCTTCAGCCTCGCTGTTCTGAGGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 90 bp TTTCCTCATCTGAAACATGGGAAGAAGGGTGGCAGCCGCCTCCTATaGCCGGGACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTGCT +
Preference number: 5 (lower is better)
Translates to: FPHLKHGKKGGSRLL*PGQPSVDSVQGVPA
Trigger: AGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CCA 90 bp CGAACCAGAGGAAAGCCCAGAAGGCTCATTTCCTCATCTGAAACATaGGAAGAAGGGTGGCAGCCGCCTCCTATGGCCGGGACAGCCCTC +
Preference number: 5 (lower is better)
Translates to: RTRGKPRRLISSSET*EEGWQPPPMAGTAL
Trigger: GAGGGCTGTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGCCTTCTGGGCTTTCCTCTGGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS CCA 90 bp TTCAGCCTGGCTTATCCTGAGAGCTCCAGGCTTAGAACTAGGGGTTaGTCCCAGTCCGGGGACCCAAGCCTCAGAACAGCGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FSLAYPESSRLRTRG*SQSGDPSLRTARLK
Trigger: CTTCAGCCTCGCTGTTCTGAGGCTTGGGTCCCCGGACTGGGACCAACCCCTAGTTCTAAGCCTGGAGCTCTCAGGATAAGCCAGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS-3UTR CAA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGG +
Preference number: 5 (lower is better)
Translates to: MNASRQPMYGAATYLVTVAFLRS*TLLICG
Trigger: CCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGC...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ATGAACGCCTCTAGGCAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MNASRQPMYGAATYLVTVDRTAF*RSLTLL
Trigger: CAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTC...GACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTGCCTAGAGGCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACTTCAGTGGGTTGTCCTaGGGCTTGGAGACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: MRTEPDQEPCDILGQDANFSGLS*GLETCH
Trigger: GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAA...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ATGAGGACAGAGCCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTTCGTTCAGTGGGTaGTCCTTGGGCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: MRTEPDQEPCDILGQDANPSFSG*SLGLET
Trigger: GGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGG...GTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGGCTCTGTCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CCCTCACTCACGCCCTCACCTTTGGCCTGGTACAGGTTTCACTCTTCAGGCCAAGCCCTCTTTGGGCCTTaGGGTCACCTGCCACACTCT +
Preference number: 5 (lower is better)
Translates to: PSLTPSPLAWYRFHSSGQALFGP*GHLPHS
Trigger: AGAGTGTGGCAGGTGACCCAAAGGCCCAAAGAGGGC...TTGGCCTGAAGAGTGAAACCTGTACCAGGCCAAAGGTGAGGGCGTGAGTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GACCTCGGGCCAGTCACACCCTCATCTGTGCCTTGTTGTCCACCCAGCCCTAGGGGGATCCCCGAGGCTTaGAAGATCAAGAATCACCAG +
Preference number: 5 (lower is better)
Translates to: DLGPVTPSSVPCCPPSPRGIPEA*KIKNHQ
Trigger: CTGGTGATTCTTGATCTTCAAAGCCTCGGGGATCCC...CCTAGGGCTGGGTGGACAACAAGGCACAGATGAGGGTGTGACTGGCCCGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTTGGAAGCTTAGGTCCTaGAATCTCCGCACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PDQEPCDILGQDANPKDSWKLRS*NLRTAR
Trigger: CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCA...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS GCA 90 bp CCAATCAGATTCCTGGAAGTCACGGAGCAGAGGTCAGGGTGCCTCTaGCAAAGGCTGCTTCTGAAGGGCAAAGGGCAGCAGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PIRFLEVTEQRSGCL*QRLLLKGKGQQVRL
Trigger: CAACCTGACCTGCTGCCCTTTGCCCTTCAGAAGCAGCCTTTGGCAGAGGCACCCTGACCTCTGCTCCGTGACTTCCAGGAATCTGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 90 bp CATCCACCAATCAGATTCCTGGAAGTCACGGAGCAGAGGTCAGGGTaGCTCTGCCAAAGGCTGCTTCTGAAGGGCAAAGGGCAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: HPPIRFLEVTEQRSG*LCQRLLLKGKGQQV
Trigger: GACCTGCTGCCCTTTGCCCTTCAGAAGCAGCCTTTGGCAGAGGCACCCTGACCTCTGCTCCGTGACTTCCAGGAATCTGATTGGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS-3UTR CAA 90 bp TCACACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGTTCAGTGGGTTGTCCTaGGGCTTGGAGACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: SHRCEGRGYCSAPTAQQWFSGLS*GLETCH
Trigger: GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAA...CCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CAGCCCATGTATGGGGCCGCTACCTACCTGGTAACTGTCCACGGCTGTCCATTTCCTTCGTTCAGTGGGTaGTCCTTGGGCTTGGAGACC +
Preference number: 5 (lower is better)
Translates to: QPMYGAATYLVTVHGCPFPSFSG*SLGLET
Trigger: GGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGG...AAATGGACAGCCGTGGACAGTTACCAGGTAGGTAGCGGCCCCATACATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp GAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTTGGAAGCTTAGGTCCTaGAATCTCCGCACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERLLLCTHSSAMGTMNASWKLRS*NLRTAR
Trigger: CCTGGCCGTGCGGAGATTCAAGGACCTAAGCTTCCA...AGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp GCTGCTCCTGCCACCTCACTGCCAGGGGTGATACAGGGCTGCCGGCCTCTGCAATCCACGGCTGTCCATTaGGAAGAGATATTGATGTGT +
Preference number: 5 (lower is better)
Translates to: AAPATSLPGVIQGCRPLQSTAVH*EEILMC
Trigger: ACACATCAATATCTCTTCCAAATGGACAGCCGTGGA...TTGCAGAGGCCGGCAGCCCTGTATCACCCCTGGCAGTGAGGTGGCAGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGGCCCTGGGCTGGCCTTaGTTTCATTGGCACAACAGC +
Preference number: 5 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQALGWP*FHWHNS
Trigger: GCTGTTGTGCCAATGAAACAAAGGCCAGCCCAGGGC...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS GCA 90 bp GAGGGAGAGACAGAGAAAGAAGGTAATCAACTCAGGCCGCATTTCTaGAGCCTCTGCCAAACCCCCATGTCCAGCCACACCGCTGACGTG +
Preference number: 5 (lower is better)
Translates to: EGETEKEGNQLRPHF*SLCQTPMSSHTADV
Trigger: CACGTCAGCGGTGTGGCTGGACATGGGGGTTTGGCAGAGGCTGCAGAAATGCGGCCTGAGTTGATTACCTTCTTTCTCTGTCTCTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 90 bp AAGCCCAGAAGGCTCATTTCCTCATCTGAAACATGGGAAGAAGGGTaGCAGCCGCCTCCTATGGCCGGGACAGCCCTCTGTAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: KPRRLISSSETWEEG*QPPPMAGTALCRLC
Trigger: ACAGAGTCTACAGAGGGCTGTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGCCTTCTGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CAA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCACAGTGATCAGTCCTTaGAGAGACCACGAAGGGGTT +
Preference number: 5 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSTVISP*RDHEGV
Trigger: AACCCCTTCGTGGTCTCTCAAAGGACTGATCACTGT...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GGGCCCTTCTCCAAGGAAAGCTTTGGGAGCAAGGGAGAAGTAGGGGAGGGCAGCGTCCTTTGGGAGGACTaGGACACACCTGAGTTTAGA +
Preference number: 5 (lower is better)
Translates to: GPFSKESFGSKGEVGEGSVLWED*DTPEFR
Trigger: TCTAAACTCAGGTGTGTCCAAGTCCTCCCAAAGGAC...GCTGCCCTCCCCTACTTCTCCCTTGCTCCCAAAGCTTTCCTTGGAGAAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp TCACACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGCATGCCCTGGCATCTaGGACATTTCTGGCACTAGG +
Preference number: 5 (lower is better)
Translates to: SHRCEGRGYCSAPTAQQWACPGI*DISGTR
Trigger: CCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGC...CCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp GTCCCTTCGTTCAGTGGGTTGTCCTTGGGCTTGGAGACCTGCCACTGGTTGGCCAGTGGAGAACCTGAATaGGTTCCTCAAGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: VPSFSGLSLGLETCHWLASGEPE*VPQASL
Trigger: AAGGCTGGCTTGAGGAACCAATTCAGGTTCTCCACT...GGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAACGAAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415332.1
CDS-3UTR CAA 90 bp TCAGTTCTGTTTCCTGGGAGGTCACAAGGGCAGGGAATCGAGGCACCTGCTGGGTGCCCTGGGATATACTaGCACATACGTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: SVLFPGRSQGQGIEAPAGCPGIY*HIRRQS
Trigger: GGACTGTCTACGTATGTGCAAGTATATCCCAGGGCA...CCCAGCAGGTGCCTCGATTCCCTGCCCTTGTGACCTCCCAGGAAACAGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAGCATGCCCTGGCATCTaGGACATTTCTGGCACTAGG +
Preference number: 5 (lower is better)
Translates to: VKGEAIALHPQLSNGDHEACPGI*DISGTR
Trigger: CCTAGTGCCAGAAATGTCCAAGATGCCAGGGCATGC...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACAGTGGAGAACCTGAATaGGTTCCTCAAGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TAVKGEAIALHPQLSNGDSGEPE*VPQASL
Trigger: AAGGCTGGCTTGAGGAACCAATTCAGGTTCTCCACT...GTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACAACAGCCTTGAGAGGTaGGTCCATTATCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: TAVKGEAIALHPQLSNGDNSLER*VHYHPS
Trigger: TGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTT...GTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp ATTCCCCCTTTCGTGCTCCTTAGAGAATCAAAGGGGTCTTGGGCCAAGGTTAGGTTCAGTGGGTTGTCCTaGGGCTTGGAGACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: IPPFVLLRESKGSWAKVRFSGLS*GLETCH
Trigger: GTGGCAGGTCTCCAAGCCCAAGGACAACCCACTGAA...CCTAACCTTGGCCCAAGACCCCTTTGATTCTCTAAGGAGCACGAAAGGGGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GCCCTAGGTAAGGGCTTAGTGACCCCTCCTAGAGGCAAGGACAGTGATCAGTCCAGCCCCTTCTCCGGATaGGAAAATGAAGTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: ALGKGLVTPPRGKDSDQSSPFSG*ENEVSN
Trigger: GTTGCTGACTTCATTTTCCAATCCGGAGAAGGGGCT...GGACTGATCACTGTCCTTGCCTCTAGGAGGGGTCACTAAGCCCTTACCTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp CTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAACGCCTCTAGGCAGAACAGCCTTGAGAGGTaGGTCCATTATCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLLCTHSSAMGTMNASRQNSLER*VHYHPS
Trigger: TGAGGGGTGATAATGGACCAACCTCTCAAGGCTGTT...CTGCCTAGAGGCGTTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTATTGGCACAACAGCCTaGAGAGGTTGGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: PDQEPCDILGQDANPKDSIGTTA*RGWSII
Trigger: GATAATGGACCAACCTCTCAAGGCTGTTGTGCCAAT...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp TGGACAGTGGGTGAGGGTCAGAACATCTCACAGCCTCTTGTGGTGGGCACAGAAAGTCACCACCTTCACTaGGTTCACCACAGATGGATG +
Preference number: 5 (lower is better)
Translates to: WTVGEGQNISQPLVVGTESHHLH*VHHRWM
Trigger: CATCCATCTGTGGTGAACCAAGTGAAGGTGGTGACT...TTCTGTGCCCACCACAAGAGGCTGTGAGATGTTCTGACCCTCACCCACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp AGTGGGCCTTCTGGAAGGCCAAGGAAACACCTCTCATGCGCTTGGCTGCTGCAGGCGCTCAAGGAATGCTaGATGACACAATGTATGAAT +
Preference number: 5 (lower is better)
Translates to: SGPSGRPRKHLSCAWLLQALKEC*MTQCMN
Trigger: ATTCATACATTGTGTCATCAAGCATTCCTTGAGCGC...CTGCAGCAGCCAAGCGCATGAGAGGTGTTTCCTTGGCCTTCCAGAAGGCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS-3UTR CAA 90 bp GTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGGGACCATGAAATTGGCACAACAGCCTaGAGAGGTTGGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: VKGEAIALHPQLSNGDHEIGTTA*RGWSII
Trigger: GATAATGGACCAACCTCTCAAGGCTGTTGTGCCAAT...TTCATGGTCCCCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS CCA 90 bp GTTCTAGTTCCTTCTAAAACTAGACCTCATGACCTGCCTTCAGCCTaGCTTATCCTGAGAGCTCCAGGCTTAGAACTAGGGGTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: VLVPSKTRPHDLPSA*LILRAPGLELGVGP
Trigger: GGGACCAACCCCTAGTTCTAAGCCTGGAGCTCTCAGGATAAGCCAGGCTGAAGGCAGGTCATGAGGTCTAGTTTTAGAAGGAACTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS-3UTR CAA 90 bp GGCCAGGATGCTAACCCTAAGGACAGTGAGGTCACTCTTCACACCGCTGTGAAGTCCACGGCTGTCCATTaGGAAGAGATATTGATGTGT +
Preference number: 5 (lower is better)
Translates to: GQDANPKDSEVTLHTAVKSTAVH*EEILMC
Trigger: ACACATCAATATCTCTTCCAAATGGACAGCCGTGGA...CTTCACAGCGGTGTGAAGAGTGACCTCACTGTCCTTAGGGTTAGCATCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CCAGACCAGGAGCCCTGTGACATCCTCGGCCAGGATGCTAACCCTAAGGACAGTAAGAGCTTACATTTATaGAGCATGCTTGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: PDQEPCDILGQDANPKDSKSLHL*SMLVLS
Trigger: GCTTAGCACAAGCATGCTCAATAAATGTAAGCTCTT...ACTGTCCTTAGGGTTAGCATCCTGGCCGAGGATGTCACAGGGCTCCTGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp TCACACCGCTGTGAAGGGAGAGGCTATTGCTCTGCACCCACAGCTCAGCAATGGAAGAGCTTACATTTATaGAGCATGCTTGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: SHRCEGRGYCSAPTAQQWKSLHL*SMLVLS
Trigger: GCTTAGCACAAGCATGCTCAATAAATGTAAGCTCTT...CCATTGCTGAGCTGTGGGTGCAGAGCAATAGCCTCTCCCTTCACAGCGGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318801.8
ENST00000381535.4
CDS-3UTR CAA 90 bp CCCACCTCTATCACTAGCTGCCTGAGTGATTCTGGGCAAGTAATCTTGACCTCTTCTGGGCAAGTAATCTaGACCTCTCTAGACCTCAGT +
Preference number: 5 (lower is better)
Translates to: PTSITSCLSDSGQVILTSSGQVI*TSLDLS
Trigger: ACTGAGGTCTAGAGAGGTCAAGATTACTTGCCCAGA...AGAGGTCAAGATTACTTGCCCAGAATCACTCAGGCAGCTAGTGATAGAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 72 bp GCGACTGGTAGCCCTGGGGCTCGGTGTCGAAGGTGTTaGCCGGCTGCTGGTAGGTGCCGCCCATACCGGCGG +
Preference number: 6 (lower is better)
Translates to: ATGSPGARCRRC*PAAGRCRPYRR
Trigger: CCGCCGGTATGGGCGGCACCTACCAGCAGCCGGCCAACACCTTCGACACCGAGCCCCAGGGCTACCAGTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 72 bp GGTAGGTGCCGCCCATACCGGCGGGATCCGGCCCAGTaGGCTCCACGTAGGGCGCGTAAGGCATGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: GRCRPYRRDPAQ*APRRARKACWS
Trigger: ACTCCAGCATGCCTTACGCGCCCTACGTGGAGCCCACTGGGCCGGATCCCGCCGGTATGGGCGGCACCTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 72 bp GGCAGCAGGTCAGGTTGGCTCCACAGGTCCAGGCCCTaGTCCTGCCAAGGTCTGGCTGGGAGGCGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GSRSGWLHRSRP*SCQGLAGRRGE
Trigger: CTCCCCACGCCTCCCAGCCAGACCTTGGCAGGACCAGGGCCTGGACCTGTGGAGCCAACCTGACCTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 72 bp GAGAAGAGGGCCGAGTCGGCGCCAATCTGGTACCGCTaGAAGGCCAGCACAGCCTGGCCCGCCCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: EKRAESAPIWYR*KASTAWPAQVK
Trigger: CTTCACCTGGGCGGGCCAGGCTGTGCTGGCCTTCCAGCGGTACCAGATTGGCGCCGACTCGGCCCTCTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 72 bp CCCAGGTTTAGCGAGGGGCCCACTGAGAGCCGAGCCTaGGGGCGTCAGCAGTGGGAGCCTCATAGCCACGCA +
Preference number: 6 (lower is better)
Translates to: PRFSEGPTESRA*GRQQWEPHSHA
Trigger: TGCGTGGCTATGAGGCTCCCACTGCTGACGCCCCCAGGCTCGGCTCTCAGTGGGCCCCTCGCTAAACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp CGCCCACGGCCACGCCATAGCTGCAGGCGTTGGGGTTaGGGTTGTAGATGCAGAACTCCTCCCCCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: RPRPRHSCRRWG*GCRCRTPPPRR
Trigger: CCTCCGAGGGGGAGGAGTTCTGCATCTACAACCGCAACCCCAACGCCTGCAGCTATGGCGTGGCCGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS TCA 72 bp CCCAGTCCGGGGACCCAAGCCTCAGAACAGCGAGGCTaGAGCCTCGGGTTCGGACCCCTGACTGAGAGCATC +
Preference number: 6 (lower is better)
Translates to: PSPGTQASEQRG*SLGFGPLTESI
Trigger: GATGCTCTCAGTCAGGGGTCCGAACCCGAGGCTTCAGCCTCGCTGTTCTGAGGCTTGGGTCCCCGGACTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp GGGACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTaGTGGGTGGGGCTCACCCGAGACACCGATGTCGGA +
Preference number: 6 (lower is better)
Translates to: GTALCRLCAGGT*WVGLTRDTDVG
Trigger: TCCGACATCGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS GCA 72 bp GGGTCCCAGGCCCTGTCCTGGTCCCATCCTTCCTGCTaGCAGCCATGTGACCCTGAGTCCATCCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: GSQALSWSHPSC*QPCDPESIPSP
Trigger: GGGTGAAGGGATGGACTCAGGGTCACATGGCTGGCAGCAGGAAGGATGGGACCAGGACAGGGCCTGGGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 72 bp CGAGCACGCCCACGGCCACGCCATAGCTGCAGGCGTTaGGGTTGCGGTTGTAGATGCAGAACTCCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: RARPRPRHSCRR*GCGCRCRTPPP
Trigger: AGGGGGAGGAGTTCTGCATCTACAACCGCAACCCCAACGCCTGCAGCTATGGCGTGGCCGTGGGCGTGCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS CCA 72 bp CCACTATGGAGAACAGCCAAGACACGACGCGCAGGATaGTGTGCGGCTGCCGGACCAGGGTGTAGGGGTCGA +
Preference number: 6 (lower is better)
Translates to: PLWRTAKTRRAG*CAAAGPGCRGR
Trigger: TCGACCCCTACACCCTGGTCCGGCAGCCGCACACCATCCTGCGCGTCGTGTCTTGGCTGTTCTCCATAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS CCA 72 bp CCACGTAGGGCGCGTAAGGCATGCTGGAGTCCTGGCTaGGGTCCATGTAGTCCTGGGAGAAGAGGGCCGAGT +
Preference number: 6 (lower is better)
Translates to: PRRARKACWSPG*GPCSPGRRGPS
Trigger: ACTCGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTACGCGCCCTACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328933.10
CDS CCA 72 bp ACAGCCCTCTGTAGACTCTGTGCAGGGGGTACCTGCTaGGTGGGGCTCACCCGAGACACCGATGTCGGACAG +
Preference number: 6 (lower is better)
Translates to: TALCRLCAGGTC*VGLTRDTDVGQ
Trigger: CTGTCCGACATCGGTGTCTCGGGTGAGCCCCACCCAGCAGGTACCCCCTGCACAGAGTCTACAGAGGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CCA 72 bp GGCACAGAAGAGGCCACTGAAACACGGGCCAACCCATaGGGGCTGGCACATGCCCAGTGCCATCCATGGGTC +
Preference number: 6 (lower is better)
Translates to: GTEEATETRANP*GLAHAQCHPWV
Trigger: GACCCATGGATGGCACTGGGCATGTGCCAGCCCCCATGGGTTGGCCCGTGTTTCAGTGGCCTCTTCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CAA 90 bp GGGTGGGGCTCACCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTACACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GWGSPETPMSDRTAF*RSLTLLICGKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGGTGAGCCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CCA 72 bp CTGAAACATGGGAAGAAGGGTGGCAGCCGCCTCCTATaGCCGGGACAGCCCTCTGTAGACTCTGTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LKHGKKGGSRLL*PGQPSVDSVQG
Trigger: CCCCTGCACAGAGTCTACAGAGGGCTGTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CAA 90 bp CATGCCGAGACACCGATGTCGGACAGGACGGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGGAAGTACACGTCCAGGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: HAETPMSDRTAFLRS*TLLICGKYTSRARY
Trigger: GTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216155.11
CDS CAA 90 bp AAGGCCGAGACACCGATGTCGGACAGGACGGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGGAAGTACACGTCCAGGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: KAETPMSDRTAFLRS*TLLICGKYTSRARY
Trigger: GTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
CDS CAA 90 bp TCACCCGAGACACCGATGTCGGACAGGACGGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGGAAGTACACGTCCAGGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SPETPMSDRTAFLRS*TLLICGKYTSRARY
Trigger: GTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS TCA 72 bp GGCAGGAAGACCCCAACCCTCAGGCTGCCAGACAAATaGGGTATGGGAAGGAGGACGAGGCTGGGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: GRKTPTLRLPDK*GMGRRTRLGQG
Trigger: TCCTTGCCCCAGCCTCGTCCTCCTTCCCATACCTCATTTGTCTGGCAGCCTGAGGGTTGGGGTCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp AGGACGGCTTTCTTGCGGTCCTTGACGCTGCTGATCTaGGGGAAGTACACGTCCAGGGCCAGGTACAGCAGG +
Preference number: 6 (lower is better)
Translates to: RTAFLRSLTLLI*GKYTSRARYSR
Trigger: CCTGCTGTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS GCA 72 bp CGAACACCACTATGGAGAACAGCTCACATCCGGGCCTaGTCCTCCAGCTCACCCACGACCTCTGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RTPLWRTAHIRA*SSSSPTTSVSS
Trigger: GCTGGACACAGAGGTCGTGGGTGAGCTGGAGGAGCAGGCCCGGATGTGAGCTGTTCTCCATAGTGGTGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381535.4
CDS CAA 90 bp TGCATCTCCCATGCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTACACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CISHAETPMSDRTAF*RSLTLLICGKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCATGGGAGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216155.11
CDS CAA 90 bp AAAGCCCAGAAGGCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTACACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: KAQKAETPMSDRTAF*RSLTLLICGKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCCTTCTGGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
CDS GCA 72 bp TTCCTGGAAGTCACGGAGCAGAGGTCAGGGTGCCTCTaGCAAAGGCTGCTTCTGAAGGGCAAAGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: FLEVTEQRSGCL*QRLLLKGKGQQ
Trigger: CTGCTGCCCTTTGCCCTTCAGAAGCAGCCTTTGGCAGAGGCACCCTGACCTCTGCTCCGTGACTTCCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp CAGTGGGAGCCTCATAGCCACGCAATCTCCTGTGAGTaGCAAGGTCTCCCCAGAGAAGCCCAGACCTGCTCA +
Preference number: 6 (lower is better)
Translates to: QWEPHSHAISCE*QGLPREAQTCS
Trigger: TGAGCAGGTCTGGGCTTCTCTGGGGAGACCTTGGCACTCACAGGAGATTGCGTGGCTATGAGGCTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp GCAACTCTGCAGGCAGGAAGACCCCAACCCTCAGGCTaGCAGACAAATGAGGTATGGGAAGGAGGACGAGGC +
Preference number: 6 (lower is better)
Translates to: ATLQAGRPQPSG*QTNEVWEGGRG
Trigger: GCCTCGTCCTCCTTCCCATACCTCATTTGTCTGGCAGCCTGAGGGTTGGGGTCTTCCTGCCTGCAGAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 72 bp TTCACCCGCCTGCACCTCATTTCCTCATCTGAAACATaGGAAGAAGGGTGGCAGCCGCCTCCTATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: FTRLHLISSSET*EEGWQPPPMAG
Trigger: CCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGGTGCAGGCGGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 72 bp GCTTATCCTGAGAGCTCCAGGCTTAGAACTAGGGGTTaGTCCCAGTCCGGGGACCCAAGCCTCAGAACAGCG +
Preference number: 6 (lower is better)
Translates to: AYPESSRLRTRG*SQSGDPSLRTA
Trigger: CGCTGTTCTGAGGCTTGGGTCCCCGGACTGGGACCAACCCCTAGTTCTAAGCCTGGAGCTCTCAGGATAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CAA 72 bp ACACCGATGTCGGACAGGACGGCTTTCTTGCGGTCCTaGACGCTGCTGATCTGCGGGAAGTACACGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TPMSDRTAFLRS*TLLICGKYTSR
Trigger: CCTGGACGTGTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216155.11
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
ENST00000415332.1
ENST00000489206.1
CDS CAA 72 bp CATGCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: HAETPMSDRTAF*RSLTLLICGKY
Trigger: GTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216155.11
CDS CAA 72 bp AAGGCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: KAETPMSDRTAF*RSLTLLICGKY
Trigger: GTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318801.8
ENST00000328933.10
ENST00000381535.4
ENST00000406293.7
CDS CAA 72 bp TCACCCGAGACACCGATGTCGGACAGGACGGCTTTCTaGCGGTCCTTGACGCTGCTGATCTGCGGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: SPETPMSDRTAF*RSLTLLICGKY
Trigger: GTACTTCCCGCAGATCAGCAGCGTCAAGGACCGCAAGAAAGCCGTCCTGTCCGACATCGGTGTCTCGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415332.1
ENST00000489206.1
CDS CCA 72 bp CACCTCATTTCCTCATCTGAAACATGGGAAGAAGGGTaGCAGCCGCCTCCTATGGCCGGGACAGCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: HLISSSETWEEG*QPPPMAGTALC
Trigger: ACAGAGGGCTGTCCCGGCCATAGGAGGCGGCTGCCACCCTTCTTCCCATGTTTCAGATGAGGAAATGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS TCA 72 bp CAGAACAGCGAGGCTGAAGCCTCGGGTTCGGACCCCTaGCTGAGAGCATCCACCAATCAGATTCCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: QNSEAEASGSDP*LRASTNQIPGS
Trigger: ACTTCCAGGAATCTGATTGGTGGATGCTCTCAGTCAGGGGTCCGAACCCGAGGCTTCAGCCTCGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS GCA 72 bp AATGGGGAAGCCGAGGAACAGAGGGACATTCAAGAGTaGATCTCCCATGCCGAGACACCGATGTCGGACAGG +
Preference number: 6 (lower is better)
Translates to: NGEAEEQRDIQE*ISHAETPMSDR
Trigger: CCTGTCCGACATCGGTGTCTCGGCATGGGAGATGCACTCTTGAATGTCCCTCTGTTCCTCGGCTTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216155.11
CDS GCA 72 bp ATCAGATTCCTGGAAGTCACGGAGCAGAGGTCAGGGTaGCTCTGCCAAAGGCTGCTTCTGAAGGGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: IRFLEVTEQRSG*LCQRLLLKGKG
Trigger: CCCTTTGCCCTTCAGAAGCAGCCTTTGGCAGAGGCACCCTGACCTCTGCTCCGTGACTTCCAGGAATCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489206.1
CDS CCA 72 bp CCTTCTAAAACTAGACCTCATGACCTGCCTTCAGCCTaGCTTATCCTGAGAGCTCCAGGCTTAGAACTAGGG +
Preference number: 6 (lower is better)
Translates to: PSKTRPHDLPSA*LILRAPGLELG
Trigger: CCCTAGTTCTAAGCCTGGAGCTCTCAGGATAAGCCAGGCTGAAGGCAGGTCATGAGGTCTAGTTTTAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489206.1