Pregenerated sensors for SYNE4 (Homo sapiens)
Ensembl gene IDs: ENSG00000181392Ensembl transcript IDs: ENST00000324444.9, ENST00000340477.9, ENST00000397428.8, ENST00000465425.2, ENST00000490730.1, ENST00000503121.5, ENST00000505054.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGGGTGTCCTGGGTATTCGGGCATGAGAGCAGCAGGGGCCTCCTaGCGCGGGCAGGAGAAACATGGCACCCACCAGGAGGAGGAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: VGCPGYSGMRAAGAS*RGQEKHGTHQEEEE Trigger: CTCTTCCTCCTCCTGGTGGGTGCCATGTTTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGCTCTCATGCCCGAATACCCAGGACACCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| 3UTR GCA 90 bp | AGGAGGAGGAAGAGGAGGAAGAGGATAAGGAGGAAGGTCAGAGGCTaGCTGGATGCAGGATCGGGGGCCCTGAGGCTTCCGGAGCAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: RRRKRRKRIRRKVRG*LDAGSGALRLPEQG Trigger: TCCCTGCTCCGGAAGCCTCAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTTCCTCCTTATCCTCTTCCTCCTCTTCCTCCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGGTATTCGGGCATGAGAGCAGCAGGGGCCTCCTGACGCGGGCAGGAGAAAGGAAGGTCAGAGGCTaGCTGGATGCAGGATCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SWVFGHESSRGLLTRAGERKVRG*LDAGSG Trigger: CCCCGATCCTGCATCCAGGCAGCCTCTGACCTTCCT...TTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGCTCTCATGCCCGAATACCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAGACTGGGGGAAGACCATTGACATAGCTGAGCACCAGGTAGGGTGTCCTAGGTCAGAGGCTGCCTaGATGCAGGATCGGGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TSDWGKTIDIAEHQVGCPRSEAA*MQDRGP Trigger: GGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCT...AGGACACCCTACCTGGTGCTCAGCTATGTCAATGGTCTTCCCCCAGTCTGATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| 3UTR TCA 72 bp | CCTGGGTATTCGGGCATGAGAGCAGCAGGGGCCTCCTaGCGCGGGCAGGAGAAACATGGCACCCACCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGYSGMRAAGAS*RGQEKHGTHQE Trigger: CTCCTGGTGGGTGCCATGTTTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGCTCTCATGCCCGAATACCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGTCAGAGGCTGCCTGGATGCAGGATCGGGGGCCCTGAGGCTTCCGGAGCAGCAGCAGGGGCCTCCTaGCGCGGGCAGGAGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: EGQRLPGCRIGGPEASGAAAGAS*RGQEKH Trigger: ATGTTTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGC...TGCTCCGGAAGCCTCAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTCAGAGGCTGCCTGGATGCAGGATCGGGGGCCCTGAGGCTTCCGGAGCAGAGGTCAGAGGCTGCCTaGATGCAGGATCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVRGCLDAGSGALRLPEQRSEAA*MQDRGP Trigger: GGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCT...CTGCTCCGGAAGCCTCAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCTCCTGACGCGGGCAGGAGAAACATGGCACCCACCAGGAGGAGGAAGAGGGTGTCTGCTTCCTCGTaGTCTCCTCTCCGGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPPDAGRRNMAPTRRRKRVSASS*SPLRTR Trigger: CCGCGTCCGGAGAGGAGAGCACGAGGAAGCAGACAC...CCTCTTCCTCCTCCTGGTGGGTGCCATGTTTCTCCTGCCCGCGTCAGGAGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAGAGGCTGCCTGGATGCAGGATCGGGGGCCCTGAGGCTTCCGGAGCAGACGCGGGGCAGACGGTaGATCCAACAATGTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVRGCLDAGSGALRLPEQTRGRR*IQQCPP Trigger: AGGCGGACATTGTTGGATGCACCGTCTGCCCCGCGT...CTGCTCCGGAAGCCTCAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAGAGGCTGCCTGGATGCAGGATCGGGGGCCCTGAGGCTTCCGGAGCAGAGGAAGGTCAGAGGCTaGCTGGATGCAGGATCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVRGCLDAGSGALRLPEQRKVRG*LDAGSG Trigger: CCCCGATCCTGCATCCAGGCAGCCTCTGACCTTCCT...CTGCTCCGGAAGCCTCAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGTATTCGGGCATGAGAGCAGCAGGGGCCTCCTGACGCGGGCAGGAGAACCAGGTAGGGTGTCCTaGGTATTCGGGCATGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWVFGHESSRGLLTRAGEPGRVS*VFGHES Trigger: GCTCTCATGCCCGAATACCCAGGACACCCTACCTGG...TTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGCTCTCATGCCCGAATACCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGTATTCGGGCATGAGAGCAGCAGGGGCCTCCTGACGCGGGCAGGAGAAAGGGAGTGTCTTTGGTaGCGTGCTAAGCGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWVFGHESSRGLLTRAGERECLW*RAKRFW Trigger: CCAGAAACGCTTAGCACGTCACCAAAGACACTCCCT...TTCTCCTGCCCGCGTCAGGAGGCCCCTGCTGCTCTCATGCCCGAATACCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAGACTGGGGGAAGACCATTGACATAGCTGAGCACCAGGTAGGGTGTCCTGCTAAGCGTTTCTGGTaGCCGAGGCCAGACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSDWGKTIDIAEHQVGCPAKRFW*PRPDSS Trigger: GCTGGAGTCTGGCCTCGGCCACCAGAAACGCTTAGC...AGGACACCCTACCTGGTGCTCAGCTATGTCAATGGTCTTCCCCCAGTCTGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCAGGAGGAGGAAGAGGAGGAAGAGGATAAGGAGGAAGGTCAGAGGCTGCTTACACACATCAGACTaGGGGAAGACCATTGACATA | + |
|
Preference number: 4 (lower is better) Translates to: PTRRRKRRKRIRRKVRGCLHTSD*GKTIDI Trigger: TATGTCAATGGTCTTCCCCCAGTCTGATGTGTGTAA...GCAGCCTCTGACCTTCCTCCTTATCCTCTTCCTCCTCTTCCTCCTCCTGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS GCA 90 bp | CCACTCTGGGCCAATGCCCAGTGCCCCAGGCCTTGCTCCAGGTCCTaGAGCCGGCGGCCCAGCCCCAGCAGGCACAGGTGCAGGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLWANAQCPRPCSRS*SRRPSPSRHRCRLF Trigger: GAACAGCCTGCACCTGTGCCTGCTGGGGCTGGGCCGCCGGCTGCAGGACCTGGAGCAAGGCCTGGGGCACTGGGCATTGGCCCAGAGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000324444.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS CCA 90 bp | CCCAACCCTGGTGGCCTCTCCTATGTCCCCAGGCGATCACAGCCATaGCACCTCCTACCCTCACATGGCCCCTGCCACCACGCCTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: PNPGGLSYVPRRSQP*HLLPSHGPCHHAYP Trigger: AGGGTAGGCGTGGTGGCAGGGGCCATGTGAGGGTAGGAGGTGCCATGGCTGTGATCGCCTGGGGACATAGGAGAGGCCACCAGGGTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505054.2 |
||
| CDS CCA 90 bp | ACGGTGCATCCAACAATGTCCGCCTCTCTAGGTGCTCCCGGTGGGTaGTTGAGGGGCTCTGAGCCAAGTCTAGGGCCCAGAGGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVHPTMSASLGAPGG*LRGSEPSLGPRGRD Trigger: GTCCCTGCCTCTGGGCCCTAGACTTGGCTCAGAGCCCCTCAACCACCCACCGGGAGCACCTAGAGAGGCGGACATTGTTGGATGCACCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS CCA 90 bp | CCACCAGGTCCTGGCCAGTCCGAGTCTCCCTCGACCTCCAAGTCCTaGTCCAGCGTGTTGGCCTCCTCGAACACCTCACAGTGTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPGPGQSESPSTSKS*SSVLASSNTSQCLP Trigger: GGGCAAACACTGTGAGGTGTTCGAGGAGGCCAACACGCTGGACCAGGACTTGGAGGTCGAGGGAGACTCGGACTGGCCAGGACCTGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340477.9 |
||
| CDS CCA 90 bp | AGGTCACGACAGGCCTCCCTGAAGAGGTGGCACTTCAGGAGAGACTaGGACAGTCAGGAGGTGAGTGGGGCATCATCTGGGGGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRQASLKRWHFRRD*DSQEVSGASSGGLR Trigger: CCTGAGGCCCCCAGATGATGCCCCACTCACCTCCTGACTGTCCCAGTCTCTCCTGAAGTGCCACCTCTTCAGGGAGGCCTGTCGTGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS GCA 90 bp | GAAGGGCAGGATCTTGCTAGAAGGTGCGCAGAGATGTCCCCAGGGTaGCTGGCAGAAGGTCCCTCAAGGGGGTCTGCTCTCACCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGQDLARRCAEMSPG*LAEGPSRGSALTSR Trigger: CCTTGAGGTGAGAGCAGACCCCCTTGAGGGACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATCCTGCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS GCA 90 bp | AGGAGGAGGAAGAGGAGGAAGAGGATAAGGAGGAAGGTCAGAGGCTaGCTGGATGCAGGATCGGGGGCCCTCACAGTGTTTGCCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRKRRKRIRRKVRG*LDAGSGALTVFAPS Trigger: GCTGGGGGCAAACACTGTGAGGGCCCCCGATCCTGCATCCAGGCAGCCTCTGACCTTCCTCCTTATCCTCTTCCTCCTCTTCCTCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000503121.5 |
||
| CDS CCA 90 bp | GGCAGGATCTTGCTAGAAGGTGCGCAGAGATGTCCCCAGGGTGCCTaGCAGAAGGTCCCTCAAGGGGGTCTGCTCTCACCTCAAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRILLEGAQRCPQGA*QKVPQGGLLSPQGL Trigger: AAGGCCTTGAGGTGAGAGCAGACCCCCTTGAGGGACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS GCA 90 bp | AGAGCCACTGACACCTCCTTGGAAGGGCAGGATCTTGCTAGAAGGTaGGCAGAGATGTCCCCAGGGTGCCTGGCAGAAGGTCCCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RATDTSLEGQDLARR*AEMSPGCLAEGPSR Trigger: CCTTGAGGGACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATCCTGCCCTTCCAAGGAGGTGTCAGTGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS TCA 90 bp | ATGTGTAATGAGTTTCTGTTACAAGCCAGGAACTGTTCTAGGAGCTaGGGACACAGTGGGGATGGAAATAGGCAAATTCCTGGCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: MCNEFLLQARNCSRS*GHSGDGNRQIPGLR Trigger: ACGGAGGCCAGGAATTTGCCTATTTCCATCCCCACTGTGTCCTCAGCTCCTAGAACAGTTCCTGGCTTGTAACAGAAACTCATTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CCA 72 bp | TGTCCCCCGCCGGATCCCACTCCAACTCTGTGGAAGTaGGGAGGCTACTGGGTGCCCAGGGCCCCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: CPPPDPTPTLWK*GGYWVPRAPRP Trigger: GGGTCTGGGGGCCCTGGGCACCCAGTAGCCTCCCCACTTCCACAGAGTTGGAGTGGGATCCGGCGGGGGACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 |
||
| CDS GCA 72 bp | CCCAGGGTGCCTGGCAGAAGGTCCCTCAAGGGGGTCTaGTCTCACCTCAAGGCCTTGTCCCCTGCCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVPGRRSLKGV*SHLKALSPALG Trigger: CCCCAGGGCAGGGGACAAGGCCTTGAGGTGAGAGCAGACCCCCTTGAGGGACCTTCTGCCAGGCACCCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CCA 72 bp | TCCACCTGGAGGGCCTGCAGCTGCACCATCCCACTCTaGGCCAATGCCCAGTGCCCCAGGCCTTGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STWRACSCTIPL*ANAQCPRPCSR Trigger: CCTGGAGCAAGGCCTGGGGCACTGGGCATTGGCCCAGAGTGGGATGGTGCAGCTGCAGGCCCTCCAGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000324444.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS GCA 72 bp | CGGCCCAGCCCCAGCAGGCACAGGTGCAGGCTGTTCTaGTCAGCCTCTAGTACCTCCAGGCCAGAAATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPSPSRHRCRLF*SASSTSRPEMG Trigger: CCCCATTTCTGGCCTGGAGGTACTAGAGGCTGAGCAGAACAGCCTGCACCTGTGCCTGCTGGGGCTGGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000324444.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS TCA 72 bp | TGGCCGAGGCCAGACTCCAGCATGTCCTGTCGGGAGTaGGAGGTGTCTGCTTCCTCGTGCTCTCCTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WPRPDSSMSCRE*EVSASSCSPLR Trigger: CCGGAGAGGAGAGCACGAGGAAGCAGACACCTCTCACTCCCGACAGGACATGCTGGAGTCTGGCCTCGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397428.8 |
||
| CDS CCA 72 bp | CCTGGCCAGTCCGAGTCTCCCTCGACCTCCAAGTCCTaGTCCAGCGTGTTGGCCTCCTCGAACACCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PGQSESPSTSKS*SSVLASSNTSQ Trigger: CTGTGAGGTGTTCGAGGAGGCCAACACGCTGGACCAGGACTTGGAGGTCGAGGGAGACTCGGACTGGCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340477.9 |
||
| CDS CAA 90 bp | GTGCATCCAACAATGTCCGCCTCTCTAGGTGCTCCCGGTGGGTGGTaGAGGGGCTCTGAGCCAAGTCTAGGGCCCAGAGGCAGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VHPTMSASLGAPGGW*RGSEPSLGPRGRDR Trigger: CCTGTCCCTGCCTCTGGGCCCTAGACTTGGCTCAGAGCCCCTCAACCACCCACCGGGAGCACCTAGAGAGGCGGACATTGTTGGATGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS TCA 72 bp | CTGCTCTGGGCTAGGAGGCAGGGGGCGGTGACTGGGTaGGTCTCGACACCTCACTTTTCAGCCTACCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLWARRQGAVTG*VSTPHFSAYRH Trigger: GTGACGGTAGGCTGAAAAGTGAGGTGTCGAGACTCACCCAGTCACCGCCCCCTGCCTCCTAGCCCAGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505054.2 |
||
| CDS CCA 72 bp | CCAACAATGTCCGCCTCTCTAGGTGCTCCCGGTGGGTaGTTGAGGGGCTCTGAGCCAAGTCTAGGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTMSASLGAPGG*LRGSEPSLGPR Trigger: TCTGGGCCCTAGACTTGGCTCAGAGCCCCTCAACCACCCACCGGGAGCACCTAGAGAGGCGGACATTGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS CAA 90 bp | GAGGGGGAGACAGAGCCACTGACACCTCCTTGGAAGGGCAGGATCTaGCTAGAAGGTGCGCAGAGATGTCCCCAGGGTGCCTGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGETEPLTPPWKGRI*LEGAQRCPQGAWQK Trigger: CTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATCCTGCCCTTCCAAGGAGGTGTCAGTGGCTCTGTCTCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS TCA 72 bp | TGGCCGAGGCCAGACTCCAGCATGTCCTGTCGGGAGTaGGAGGTGTCTGCTTCCTCACAGTGTTTGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPRPDSSMSCRE*EVSASSQCLPP Trigger: TGGGGGCAAACACTGTGAGGAAGCAGACACCTCTCACTCCCGACAGGACATGCTGGAGTCTGGCCTCGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505054.2 |
||
| CDS GCA 72 bp | GATCTTGCTAGAAGGTGCGCAGAGATGTCCCCAGGGTaGCTGGCAGAAGGTCCCTCAAGGGGGTCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLARRCAEMSPG*LAEGPSRGSAL Trigger: GAGAGCAGACCCCCTTGAGGGACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CCA 72 bp | AGTCTCCCTCGACCTCCAAGTCCTGGTCCAGCGTGTTaGCCTCCTCGAACACCTCACAGTGTTTGCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPRPPSPGPAC*PPRTPHSVCPQ Trigger: CTGGGGGCAAACACTGTGAGGTGTTCGAGGAGGCCAACACGCTGGACCAGGACTTGGAGGTCGAGGGAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340477.9 |
||
| CDS CCA 72 bp | TTGCTAGAAGGTGCGCAGAGATGTCCCCAGGGTGCCTaGCAGAAGGTCCCTCAAGGGGGTCTGCTCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LLEGAQRCPQGA*QKVPQGGLLSP Trigger: AGGTGAGAGCAGACCCCCTTGAGGGACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CAA 72 bp | GAGTCTCCCTCGACCTCCAAGTCCTGGTCCAGCGTGTaGGCCTCCTCGAACACCTCACAGTGTTTGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESPSTSKSWSSV*ASSNTSQCLPP Trigger: TGGGGGCAAACACTGTGAGGTGTTCGAGGAGGCCAACACGCTGGACCAGGACTTGGAGGTCGAGGGAGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340477.9 |
||
| CDS GCA 72 bp | GACACCTCCTTGGAAGGGCAGGATCTTGCTAGAAGGTaGGCAGAGATGTCCCCAGGGTGCCTGGCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DTSLEGQDLARR*AEMSPGCLAEG Trigger: ACCTTCTGCCAGGCACCCTGGGGACATCTCTGCGCACCTTCTAGCAAGATCCTGCCCTTCCAAGGAGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CAA 72 bp | CCCCTCCAGCCTCACATCCTGGAGATGAGGAGATGCTaGCCTCTTCTTGTCCTGAGGCTTCCGGAGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLQPHILEMRRC*PLLVLRLPEQG Trigger: TCCCTGCTCCGGAAGCCTCAGGACAAGAAGAGGCAAGCATCTCCTCATCTCCAGGATGTGAGGCTGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS TCA 72 bp | GGAGTGCTCATGTTTGGAGGTCACGACAGGCCTCCCTaGAGAGGTGGCACTTCAGGAGAGACTGGGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVLMFGGHDRPP*RGGTSGETGTV Trigger: GACTGTCCCAGTCTCTCCTGAAGTGCCACCTCTTCAGGGAGGCCTGTCGTGACCTCCAAACATGAGCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS CCA 72 bp | GCACTTCAGGAGAGACTGGGACAGTCAGGAGGTGAGTaGGGCATCATCTGGGGGCCTCAGGATAGGAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALQERLGQSGGE*GIIWGPQDRSE Trigger: TTCACTCCTATCCTGAGGCCCCCAGATGATGCCCCACTCACCTCCTGACTGTCCCAGTCTCTCCTGAAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||
| CDS GCA 72 bp | ATTCCCCTCCAGCCTCACATCCTGGAGATGAGGAGATaGTTGCCTCTTCTTGTCCTGAGGCTTCCGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPLQPHILEMRR*LPLLVLRLPEQ Trigger: CTGCTCCGGAAGCCTCAGGACAAGAAGAGGCAAGCATCTCCTCATCTCCAGGATGTGAGGCTGGAGGGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000324444.9 ENST00000340477.9 ENST00000465425.2 ENST00000490730.1 |
||
| CDS CCA 72 bp | AGACTGGGACAGTCAGGAGGTGAGTGGGGCATCATCTaGGGGCCTCAGGATAGGAGTGAATTTGAGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGQSGGEWGII*GPQDRSEFEMG Trigger: CCCCATCTCAAATTCACTCCTATCCTGAGGCCCCCAGATGATGCCCCACTCACCTCCTGACTGTCCCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465425.2 |
||