RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000176438

Ensembl transcript IDs: ENST00000334258.9, ENST00000553340.1, ENST00000554873.5, ENST00000555759.1, ENST00000557275.5, ENST00000682763.1

Found 1453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCGGGAACTCACATGGAGTCACCGCGGCCCCAGCCCAGGTGGTaGATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGT +
Preference number: 1 (lower is better)
Translates to: ASGTHMESPRPQPRW*MEPSSPTPGWRGPG
Trigger: ACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATGCACCACCTGGGCTGGGGCCGCGGTGACTCCATGTGAGTTCCCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CGGGAACTCACATGGAGTCACCGCGGCCCCAGCCCAGGTGGTGCATaGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTG +
Preference number: 1 (lower is better)
Translates to: RELTWSHRGPSPGGA*SPARLHLAGEGLVL
Trigger: CAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATGCACCACCTGGGCTGGGGCCGCGGTGACTCCATGTGAGTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GACAGTGGGTACCTGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTaGCAGCTCCCTTCAGCGGTGGGAGTCAACGGACTTCCCCGCAGG +
Preference number: 1 (lower is better)
Translates to: DSGYLLPSPGTSSWC*QLPSAVGVNGLPRR
Trigger: CCTGCGGGGAAGTCCGTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp TGCTCAGCAGGCAGAGACCGCGCAAAGCCAACTCTGTCCTCTGCCTaGCCCCGCAAGGGCTGGCCTGTCCGTGCTTTTCCAGTGGGAAGG +
Preference number: 1 (lower is better)
Translates to: CSAGRDRAKPTLSSA*PRKGWPVRAFPVGR
Trigger: CCTTCCCACTGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGCAGGCAGAGGACAGAGTTGGCTTTGCGCGGTCTCTGCCTGCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTaGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAG +
Preference number: 1 (lower is better)
Translates to: RPLGPHPGVASSLQR*ESTDFPAGVGTGGK
Trigger: CTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GCCAACTCTGTCCTCTGCCTGCCCCCGCAAGGGCTGGCCTGTCCGTaGTTTTCCAGTGGGAAGGTAGACAGACAGTGGGTACCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: ANSVLCLPPQGLACP*FSSGKVDRQWVPAP
Trigger: GGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGCAGGCAGAGGACAGAGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTaGGTGGCCTGGGCCCTAGTCCCATATGGGGATGCACATGAGACC +
Preference number: 1 (lower is better)
Translates to: HGAQLAYTWLERAWF*VAWALVPYGDAHET
Trigger: GGTCTCATGTGCATCCCCATATGGGACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp AGCAGATTCTCTCACCTCTGTCCTGGACCCTCGATCCCTGGCCCCTaGCGTGGCAGATGCTTCCCTTCTCACCTGCAGCTCGAGCTCTCG +
Preference number: 1 (lower is better)
Translates to: SRFSHLCPGPSIPGP*RGRCFPSHLQLELS
Trigger: CGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAGAATCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTaGGCCCTAGTCCCATATGGGGATGCACATGAGACCTTCTTGGCC +
Preference number: 1 (lower is better)
Translates to: QLAYTWLERAWFWVA*ALVPYGDAHETFLA
Trigger: GGCCAAGAAGGTCTCATGTGCATCCCCATATGGGACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TCCAGTGGGAAGGTAGACAGACAGTGGGTACCTGCTCCCGTCCCCTaGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGAGT +
Preference number: 1 (lower is better)
Translates to: SSGKVDRQWVPAPVP*DLILVLPAPFSGGS
Trigger: ACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGGCTGGCCTGTCCGTGCTTTTCCAGTGGGAAGGTAGACAGACAGTaGGTACCTGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCA +
Preference number: 1 (lower is better)
Translates to: GLACPCFSSGKVDRQ*VPAPVPWDLILVLP
Trigger: TGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CACCTCTGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATaGTTCCCTTCTCACCTGCAGCTCGAGCTCTCGACGATGAAAACT +
Preference number: 1 (lower is better)
Translates to: HLCPGPSIPGPWRGR*FPSHLQLELSTMKT
Trigger: AGTTTTCATCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACAGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GCTCTCCTTGGCAGCACGGGTTTCCTGCCGGTGAAATGTCCTAGTTaGCTAGGACCCGGGTCCCCAAGGGCAGAGCTCACAGTGAAAGGC +
Preference number: 1 (lower is better)
Translates to: ALLGSTGFLPVKCPS*LGPGSPRAELTVKG
Trigger: GCCTTTCACTGTGAGCTCTGCCCTTGGGGACCCGGGTCCTAGGCAACTAGGACATTTCACCGGCAGGAAACCCGTGCTGCCAAGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp ATTCTCTCACCTCTGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTaGCAGATGCTTCCCTTCTCACCTGCAGCTCGAGCTCTCGACGAT +
Preference number: 1 (lower is better)
Translates to: ILSPLSWTLDPWPLA*QMLPFSPAARALDD
Trigger: ATCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CATTCTTTGTCTCCCTTGTCGGTGTTCCCTCTGTCCCGCCACCACTaGGCACCTCCCAGGGTCTCCTCGCCTCGTCTGCTGTCAGTACCT +
Preference number: 1 (lower is better)
Translates to: HSLSPLSVFPLSRHH*APPRVSSPRLLSVP
Trigger: AGGTACTGACAGCAGACGAGGCGAGGAGACCCTGGGAGGTGCCCAGTGGTGGCGGGACAGAGGGAACACCGACAAGGGAGACAAAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CATCTTTGGACCCCCGGTCCCTGCAGGGAACTCCAGCCAGCTGCCTaGAGCAAACGGGGCCTGAGAGATGGAATTGGGTCAGGTCATCCT +
Preference number: 1 (lower is better)
Translates to: HLWTPGPCRELQPAA*SKRGLRDGIGSGHP
Trigger: AGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCCTGCAGGGACCGGGGGTCCAAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CCTCCCCTTGAAGCCTCCAGGAGCCTCCCAAGCTGTGTTGTTCTGTaGCCCAGCACAGCCCAACACACTTCTGACCTCCTGAGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: PPLEASRSLPSCVVL*PSTAQHTSDLLRLG
Trigger: ACCCAGCCTCAGGAGGTCAGAAGTGTGTTGGGCTGTGCTGGGTCACAGAACAACACAGCTTGGGAGGCTCCTGGAGGCTTCAAGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CAAGCATCTTTGGACCCCCGGTCCCTGCAGGGAACTCCAGCCAGCTaGCTGAAGCAAACGGGGCCTGAGAGATGGAATTGGGTCAGGTCA +
Preference number: 1 (lower is better)
Translates to: QASLDPRSLQGTPAS*LKQTGPERWNWVRS
Trigger: TGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCCTGCAGGGACCGGGGGTCCAAAGATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CTGTCCGTGCTTTTCCAGTGGGAAGGTAGACAGACAGTGGGTACCTaGTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTT +
Preference number: 1 (lower is better)
Translates to: LSVLFQWEGRQTVGT*SRPLGPHPGVASSL
Trigger: AAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CTCACGGCAGCTGTTGCTTTGCTGGTTACTGCTAGAGGGAGACGCTaGTTCCAGGTGCAGCTGAGCACCTGGGCAGGAGTGATTCAGGCC +
Preference number: 1 (lower is better)
Translates to: LTAAVALLVTARGRR*FQVQLSTWAGVIQA
Trigger: GGCCTGAATCACTCCTGCCCAGGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CCA 90 bp ACTCCAAAGCAGATTCTCTCACCTCTGTCCTGGACCCTCGATCCCTaGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCTGCAGCTCGA +
Preference number: 1 (lower is better)
Translates to: TPKQILSPLSWTLDP*PLAWQMLPFSPAAR
Trigger: TCGAGCTGCAGGTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAGAATCTGCTTTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TTAGGAACCATCCCAGAGTTCCCTGGCAAGGAAGGGATGAGTTTCTaGCCTCGGGAACTCACATGGAGTCACCGCGGCCCCAGCCCAGGT +
Preference number: 1 (lower is better)
Translates to: LGTIPEFPGKEGMSF*PRELTWSHRGPSPG
Trigger: ACCTGGGCTGGGGCCGCGGTGACTCCATGTGAGTTCCCGAGGCCAGAAACTCATCCCTTCCTTGCCAGGGAACTCTGGGATGGTTCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGCCCAGCTGCCCTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATaGTTCATAGTCACAATGGTGGCCTCCAAGAGGCAGCAAGACACT +
Preference number: 1 (lower is better)
Translates to: GPAALASLTHFLCPV*FIVTMVASKRQQDT
Trigger: AGTGTCTTGCTGCCTCTTGGAGGCCACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAGGGCAGCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TGCCTTTGGGTAGACCTGAAGGACTCAGGGTCCCCTGAGAGGAGGTaGCAGGCCGTGGTGGCAGGTCACTCTCACACTGCAAGGATGATG +
Preference number: 1 (lower is better)
Translates to: CLWVDLKDSGSPERR*QAVVAGHSHTARMM
Trigger: CATCATCCTTGCAGTGTGAGAGTGACCTGCCACCACGGCCTGCCACCTCCTCTCAGGGGACCCTGAGTCCTTCAGGTCTACCCAAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp AGGGAAACATTTGGATGCTCCGCTCTGGCCATGTCCCAGGCGAGCTaGTGGGCAGAGAGTTCTGCCTGCTTGCCCAGGGAACTCCATTCC +
Preference number: 1 (lower is better)
Translates to: RETFGCSALAMSQAS*WAESSACLPRELHS
Trigger: GGAATGGAGTTCCCTGGGCAAGCAGGCAGAACTCTCTGCCCATCAGCTCGCCTGGGACATGGCCAGAGCGGAGCATCCAAATGTTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GATGGCCCAAGGGAATGTGCTGCTGGTGGTGACTCATCTCAGAGCTaGGGGCAGTCCCTCAGGGAAACATTTGGATGCTCCGCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: DGPRECAAGGDSSQS*GQSLRETFGCSALA
Trigger: GGCCAGAGCGGAGCATCCAAATGTTTCCCTGAGGGACTGCCCTCAGCTCTGAGATGAGTCACCACCAGCAGCACATTCCCTTGGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GGAGGTGGCAGGCCGTGGTGGCAGGTCACTCTCACACTGCAAGGATaGTGCCTTCGAGTTCCACACAAGGAGCATACAGCCAAGGCATGG +
Preference number: 1 (lower is better)
Translates to: GGGRPWWQVTLTLQG*CLRVPHKEHTAKAW
Trigger: CCATGCCTTGGCTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGACCTGCCACCACGGCCTGCCACCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GCCCTGGGTGCTCACCGCCAGGACAAAGACGGGAGGGGCTGTTCCTaGACAAAAACTCTGGCAAGCTGGGCAGATCTATTTGTCGGTTCC +
Preference number: 1 (lower is better)
Translates to: ALGAHRQDKDGRGCS*TKTLASWADLFVGS
Trigger: GGAACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTTTGTGCAGGAACAGCCCCTCCCGTCTTTGTCCTGGCGGTGAGCACCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GCCACTGCTCTGACTTCCAGGACTGGACATCTGGGCTTGGCTGCCTaGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCA +
Preference number: 1 (lower is better)
Translates to: ATALTSRTGHLGLAA*AHSAPDFPVRWSPA
Trigger: TGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGCAGCCAAGCCCAGATGTCCAGTCCTGGAAGTCAGAGCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGGACTGTAGGACTTTGTCCCTCATCTCCACAGAGGTGCTGGGGATaGGCTGGCCTGGTGTTCCTGGTTGCTGAGCTCAGAAGCAAGCGT +
Preference number: 1 (lower is better)
Translates to: GTVGLCPSSPQRCWG*AGLVFLVAELRSKR
Trigger: ACGCTTGCTTCTGAGCTCAGCAACCAGGAACACCAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGAGGGACAAAGTCCTACAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGAAGAGGGACTGTAGGACTTTGTCCCTCATCTCCACAGAGGTGCTaGGGATGGGCTGGCCTGGTGTTCCTGGTTGCTGAGCTCAGAAGC +
Preference number: 1 (lower is better)
Translates to: GRGTVGLCPSSPQRC*GWAGLVFLVAELRS
Trigger: GCTTCTGAGCTCAGCAACCAGGAACACCAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGAGGGACAAAGTCCTACAGTCCCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GTCCCTGCAGGGAACTCCAGCCAGCTGCCTGAAGCAAACGGGGCCTaGGAGATGGAATTGGGTCAGGTCATCCTTGACCCATTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: VPAGNSSQLPEANGA*EMELGQVILDPFPL
Trigger: CAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCCTGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GTCTCTCGGCTGGACAAGGTGGTTGGGTTGGGGATGATGTTACCATaGCAACCGGAGAGCAGGTGCTGGGAGATGCTGAGTCCTGCTGAC +
Preference number: 1 (lower is better)
Translates to: VSRLDKVVGLGMMLP*QPESRCWEMLSPAD
Trigger: GTCAGCAGGACTCAGCATCTCCCAGCACCTGCTCTCCGGTTGTCATGGTAACATCATCCCCAACCCAACCACCTTGTCCAGCCGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCTTATGATTaGTGTCTCTCGGCTGGACAAGGTGGTTGGGTTGGGGATGATGTT +
Preference number: 1 (lower is better)
Translates to: GSPGSSGETEVPPYD*CLSAGQGGWVGDDV
Trigger: AACATCATCCCCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAATCATAAGGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp ACAGGAAGAGGGACTGTAGGACTTTGTCCCTCATCTCCACAGAGGTaGTGGGGATGGGCTGGCCTGGTGTTCCTGGTTGCTGAGCTCAGA +
Preference number: 1 (lower is better)
Translates to: TGRGTVGLCPSSPQR*WGWAGLVFLVAELR
Trigger: TCTGAGCTCAGCAACCAGGAACACCAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGAGGGACAAAGTCCTACAGTCCCTCTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CAGGGAACATTCCATAGAGTGGAGCACTGGGCTCGGAGCCAGTCATaGCTGGGTACAAGTCCCAAATTTACCACTCCCCGCCTAGCTGGC +
Preference number: 1 (lower is better)
Translates to: QGTFHRVEHWARSQS*LGTSPKFTTPRLAG
Trigger: GCCAGCTAGGCGGGGAGTGGTAAATTTGGGACTTGTACCCAGGCATGACTGGCTCCGAGCCCAGTGCTCCACTCTATGGAATGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp ACTCCAGCCAGCTGCCTGAAGCAAACGGGGCCTGAGAGATGGAATTaGGTCAGGTCATCCTTGACCCATTTCCTCTGGAAGGGAGTCGGG +
Preference number: 1 (lower is better)
Translates to: TPASCLKQTGPERWN*VRSSLTHFLWKGVG
Trigger: CCCGACTCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GCACAAACCCTTTTCTTCGTCTGCAAGCTCCCTGAGGGCAGGGACTaGGCTTTGTTCACCCCGAATCTCCCAGCACAAAGCCTGGCACAG +
Preference number: 1 (lower is better)
Translates to: AQTLFFVCKLPEGRD*ALFTPNLPAQSLAQ
Trigger: CTGTGCCAGGCTTTGTGCTGGGAGATTCGGGGTGAACAAAGCCCAGTCCCTGCCCTCAGGGAGCTTGCAGACGAAGAAAAGGGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGAGCACTGAACGCTCCAGGGCTGACTTCCCTCCTTACCAATAGGTaGGGGGAGGTGGTAAGGAACTGGACCAATGTCACACAGCCCATC +
Preference number: 1 (lower is better)
Translates to: GALNAPGLTSLLTNR*GEVVRNWTNVTQPI
Trigger: GATGGGCTGTGTGACATTGGTCCAGTTCCTTACCACCTCCCCCCACCTATTGGTAAGGAGGGAAGTCAGCCCTGGAGCGTTCAGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TCTGAGAGACCACAGGCTGGTGTCTGTTGTGCTGAAGCCCAGAGCTaGAAGCCAGGGCTGCCCAGTTGTGCTTCTGCATGGAGATGTGTG +
Preference number: 1 (lower is better)
Translates to: SERPQAGVCCAEAQS*KPGLPSCASAWRCV
Trigger: CACACATCTCCATGCAGAAGCACAACTGGGCAGCCCTGGCTTCCAGCTCTGGGCTTCAGCACAACAGACACCAGCCTGTGGTCTCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GTGTTGTTCTGTGACCCAGCACAGCCCAACACACTTCTGACCTCCTaGGGCTGGGTCAGTCTATTTTCCCCTCCTCTGCCATGCCCAGGT +
Preference number: 1 (lower is better)
Translates to: VLFCDPAQPNTLLTS*GWVSLFSPPLPCPG
Trigger: ACCTGGGCATGGCAGAGGAGGGGAAAATAGACTGACCCAGCCTCAGGAGGTCAGAAGTGTGTTGGGCTGTGCTGGGTCACAGAACAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GGGTACAAGTCCCAAATTTACCACTCCCCGCCTAGCTGGCTGCTCTaGGGCAGGCTGCTGACCCTCTCCACACTCTGGTTTCTGATCATG +
Preference number: 1 (lower is better)
Translates to: GYKSQIYHSPPSWLL*GRLLTLSTLWFLIM
Trigger: CATGATCAGAAACCAGAGTGTGGAGAGGGTCAGCAGCCTGCCTCAGAGCAGCCAGCTAGGCGGGGAGTGGTAAATTTGGGACTTGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CACAAGCGACTGCCTCCTTGTTTCTCCCATGAGAGGAATTGGAACTaGTCAGCAGGCAGAGACCGCGCAAAGCCAACTCTGTCCTCTGCC +
Preference number: 1 (lower is better)
Translates to: HKRLPPCFSHERNWN*SAGRDRAKPTLSSA
Trigger: GGCAGAGGACAGAGTTGGCTTTGCGCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp TGCCCAGTTGTGCTTCTGCATGGAGATGTGTGTAGTACTCACACATaGTATGCTCACATACGCGTGCATCCCTCCCACCCTGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: CPVVLLHGDVCSTHT*YAHIRVHPSHPAHP
Trigger: GGGGTGGGCAGGGTGGGAGGGATGCACGCGTATGTGAGCATAGCATGTGTGAGTACTACACACATCTCCATGCAGAAGCACAACTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGCTTGGCTGCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTaGTCGCCTGCAGAGAACGGCCCTATGGCTTGGTTTCCAGATATC +
Preference number: 1 (lower is better)
Translates to: GLAAWAHSAPDFPVR*SPAENGPMAWFPDI
Trigger: GATATCTGGAAACCAAGCCATAGGGCCGTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGCAGCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CAGGGAACTCCAGCCAGCTGCCTGAAGCAAACGGGGCCTGAGAGATaGAATTGGGTCAGGTCATCCTTGACCCATTTCCTCTGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: QGTPASCLKQTGPER*NWVRSSLTHFLWKG
Trigger: TCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TTCAGTAAATCAAGCCTGACATCACCTCTGGCCTTTGACTCCCTCTaGCCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAG +
Preference number: 1 (lower is better)
Translates to: FSKSSLTSPLAFDSL*PTSPSALSSQTTIK
Trigger: CTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGGCCAGAGGGAGTCAAAGGCCAGAGGTGATGTCAGGCTTGATTTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GACTTTGTCCCTCATCTCCACAGAGGTGCTGGGGATGGGCTGGCCTaGTGTTCCTGGTTGCTGAGCTCAGAAGCAAGCGTTTCAGAAAGG +
Preference number: 1 (lower is better)
Translates to: DFVPHLHRGAGDGLA*CSWLLSSEASVSER
Trigger: CCTTTCTGAAACGCTTGCTTCTGAGCTCAGCAACCAGGAACACCAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGAGGGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCAATaGCTGCAATCCCGTTGGGCATCTTCAATGGCACAAACCCTTTTC +
Preference number: 1 (lower is better)
Translates to: GPAPSGKADGQSQGQ*LQSRWASSMAQTLF
Trigger: GAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CCCAAGCTGTGTTGTTCTGTGACCCAGCACAGCCCAACACACTTCTaGCCTCCTGAGGCTGGGTCAGTCTATTTTCCCCTCCTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: PKLCCSVTQHSPTHF*PPEAGSVYFPLLCH
Trigger: ATGGCAGAGGAGGGGAAAATAGACTGACCCAGCCTCAGGAGGTCAGAAGTGTGTTGGGCTGTGCTGGGTCACAGAACAACACAGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GTGTCTTCTGGGAACGCTGACACAGCACTGATATGGATGCAGCTCTaGAGTCTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCAT +
Preference number: 1 (lower is better)
Translates to: VSSGNADTALIWMQL*SLCPAPVSSFPGEH
Trigger: ATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
3UTR GCA 90 bp TGCTTGTTGCATTGGATTAAGATGCAAAGAGGCACAGGGCACTTCTaGCCACCAACCAGGGGAGAGAAAGCCGCAGACCCCGGACAGCAT +
Preference number: 1 (lower is better)
Translates to: CLLHWIKMQRGTGHF*PPTRGEKAADPGQH
Trigger: ATGCTGTCCGGGGTCTGCGGCTTTCTCTCCCCTGGTTGGTGGGCAGAAGTGCCCTGTGCCTCTTTGCATCTTAATCCAATGCAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp AACTCAACCCTGTCTAGTGCTGAGCAGTATCAAGCTGTCATCCAGTaGGTGCAGAGACCGACCCCCACTCCTGGAACTAACTCCCTGAGC +
Preference number: 1 (lower is better)
Translates to: NSTLSSAEQYQAVIQ*VQRPTPTPGTNSLS
Trigger: GCTCAGGGAGTTAGTTCCAGGAGTGGGGGTCGGTCTCTGCACCCACTGGATGACAGCTTGATACTGCTCAGCACTAGACAGGGTTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GAGGTCCCTCCTTATGATTGCTGTCTCTCGGCTGGACAAGGTGGTTaGGTTGGGGATGATGTTACCATGACAACCGGAGAGCAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: EVPPYDCCLSAGQGG*VGDDVTMTTGEQVL
Trigger: CAGCACCTGCTCTCCGGTTGTCATGGTAACATCATCCCCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAATCATAAGGAGGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CAAAGGAAAGGAAAGCAACTGAGGCCCAGGGAACATTCCATAGAGTaGAGCACTGGGCTCGGAGCCAGTCATGCCTGGGTACAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: QRKGKQLRPREHSIE*STGLGASHAWVQVP
Trigger: TGGGACTTGTACCCAGGCATGACTGGCTCCGAGCCCAGTGCTCCACTCTATGGAATGTTCCCTGGGCCTCAGTTGCTTTCCTTTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CCAGAGTCTTTTCTGGGAAGCGGAAGGAGAGCCCTTGAGACAGGCTaGACTCCAAAGCAGATTCTCTCACCTCTGTCCTGGACCCTCGAT +
Preference number: 1 (lower is better)
Translates to: PESFLGSGRRALETG*TPKQILSPLSWTLD
Trigger: ATCGAGGGTCCAGGACAGAGGTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CCTGCTGTCTCCAGAGTCTTTTCTGGGAAGCGGAAGGAGAGCCCTTaGGACAGGCTGAACTCCAAAGCAGATTCTCTCACCTCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: PAVSRVFSGKRKESP*DRLNSKADSLTSVL
Trigger: CAGGACAGAGGTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGGAGACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGCAAAGTCAAGGGCAATGACTGCAATCCCGTTGGGCATCTTCAATaGCACAAACCCTTTTCTTCGTCTGCAAGCTCCCTGAGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: GKVKGNDCNPVGHLQ*HKPFSSSASSLRAG
Trigger: CCCTGCCCTCAGGGAGCTTGCAGACGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GGTTTAAGCCAAAGTTGGTCGGGGGAGGAGGGATTCTGTTACTCGTaGCTGAATCTAGGGATTTCTCTTCCAGATGCGAGCCCACGCGCA +
Preference number: 1 (lower is better)
Translates to: GLSQSWSGEEGFCYS*LNLGISLPDASPRA
Trigger: TGCGCGTGGGCTCGCATCTGGAAGAGAAATCCCTAGATTCAGCCACGAGTAACAGAATCCCTCCTCCCCCGACCAACTTTGGCTTAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp AGGAAAGCAACTGAGGCCCAGGGAACATTCCATAGAGTGGAGCACTaGGCTCGGAGCCAGTCATGCCTGGGTACAAGTCCCAAATTTACC +
Preference number: 1 (lower is better)
Translates to: RKATEAQGTFHRVEH*ARSQSCLGTSPKFT
Trigger: GGTAAATTTGGGACTTGTACCCAGGCATGACTGGCTCCGAGCCCAGTGCTCCACTCTATGGAATGTTCCCTGGGCCTCAGTTGCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp AACATGCACAAGCGACTGCCTCCTTGTTTCTCCCATGAGAGGAATTaGAACTGCTCAGCAGGCAGAGACCGCGCAAAGCCAACTCTGTCC +
Preference number: 1 (lower is better)
Translates to: NMHKRLPPCFSHERN*NCSAGRDRAKPTLS
Trigger: GGACAGAGTTGGCTTTGCGCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTTGTGCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp GTGGCAGATGCTTCCCTTCTCACCTGCAGCTCGAGCTCTCGACGATaGAAACTCAGTCCAGGAGCAACAGAGGAAACACATCTTTCCTGG +
Preference number: 1 (lower is better)
Translates to: VADASLLTCSSSSRR*KLSPGATEETHLSW
Trigger: CCAGGAAAGATGTGTTTCCTCTGTTGCTCCTGGACTGAGTTTTCATCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGCATCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp AAACTTCTGGAACATGCACAAGCGACTGCCTCCTTGTTTCTCCCATaGGAGGAATTGGAACTGCTCAGCAGGCAGAGACCGCGCAAAGCC +
Preference number: 1 (lower is better)
Translates to: KLLEHAQATASLFLP*EELELLSRQRPRKA
Trigger: GGCTTTGCGCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTTGTGCATGTTCCAGAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp TTCCTTCTCTCCCTCGGGGACTCCTGCACTAAGCAATCCTCAAGCTaGTCTCTTCTCCCAACCATCTCCTGGGTTCCCAAACTTTCAGAC +
Preference number: 1 (lower is better)
Translates to: FLLSLGDSCTKQSSS*SLLPTISWVPKLSD
Trigger: GTCTGAAAGTTTGGGAACCCAGGAGATGGTTGGGAGAAGAGAGCAGCTTGAGGATTGCTTAGTGCAGGAGTCCCCGAGGGAGAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp AAAGCCTGGCACAGGCTGGAGAATGCTTGTTGCATTGGATTAAGATaGAAAGAGGCACAGGGCACTTCTGCCCACCAACCAGGGGAGAGA +
Preference number: 1 (lower is better)
Translates to: KAWHRLENACCIGLR*KEAQGTSAHQPGER
Trigger: TCTCTCCCCTGGTTGGTGGGCAGAAGTGCCCTGTGCCTCTTTGCATCTTAATCCAATGCAACAAGCATTCTCCAGCCTGTGCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCAATGACTaGAATCCCGTTGGGCATCTTCAATGGCACAAACCCTTTTCTTCG +
Preference number: 1 (lower is better)
Translates to: LPPLERQMGKVKGND*NPVGHLQWHKPFSS
Trigger: CGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp ACACAGAAGCTAAGGGAGAAACGACAGCTGGTTTTAAGTCCTCTTTaGCTCTGGGCCTCTGCTGAAGCAGCCTGCAGGCACTGGCAATTG +
Preference number: 1 (lower is better)
Translates to: TQKLREKRQLVLSPL*LWASAEAACRHWQL
Trigger: CAATTGCCAGTGCCTGCAGGCTGCTTCAGCAGAGGCCCAGAGTCAAAGAGGACTTAAAACCAGCTGTCGTTTCTCCCTTAGCTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CCTCCCTGGATGGCGGGGAAGGCTCCATTAGCTTTGGACTTGATATaGACCGAGATAACACACACATGTTCCGAGACAGTCGTTTGGCTC +
Preference number: 1 (lower is better)
Translates to: PPWMAGKAPLALDLI*TEITHTCSETVVWL
Trigger: GAGCCAAACGACTGTCTCGGAACATGTGTGTGTTATCTCGGTTCATATCAAGTCCAAAGCTAATGGAGCCTTCCCCGCCATCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GATCTATTTGTCGGTTCCCAAGCCTTGCAGGAAGAATGTCTACAATaGCTTTGGGTAGACCTGAAGGACTCAGGGTCCCCTGAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: DLFVGSQALQEECLQ*LWVDLKDSGSPERR
Trigger: CCTCCTCTCAGGGGACCCTGAGTCCTTCAGGTCTACCCAAAGGCATTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGACAAATAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CGCTTCCTCCTCCCCAGTAAAACTTCTGGAACATGCACAAGCGACTaGCTCCTTGTTTCTCCCATGAGAGGAATTGGAACTGCTCAGCAG +
Preference number: 1 (lower is better)
Translates to: RFLLPSKTSGTCTSD*LLVSPMRGIGTAQQ
Trigger: CTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTTGTGCATGTTCCAGAAGTTTTACTGGGGAGGAGGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CTCCAGCCTGGGCTTTGGGGTCCTCATTGCCCCATGTTGTGGGTTTaGACCCACTTCAGCATGAGCAAGGGTCTTTATATCTTTAAGCCT +
Preference number: 1 (lower is better)
Translates to: LQPGLWGPHCPMLWV*THFSMSKGLYIFKP
Trigger: AGGCTTAAAGATATAAAGACCCTTGCTCATGCTGAAGTGGGTCCAAACCCACAACATGGGGCAATGAGGACCCCAAAGCCCAGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp ACACAAGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTaGTTTTCTCCTCCAATTGTAGCAGAGACAGCGAAGTGCCACTCC +
Preference number: 1 (lower is better)
Translates to: TQGAYSQGMEGQDKL*FSPPIVAETAKCHS
Trigger: GGAGTGGCACTTCGCTGTCTCTGCTACAATTGGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GACAAAGACGGGAGGGGCTGTTCCTGCACAAAAACTCTGGCAAGCTaGGCAGATCTATTTGTCGGTTCCCAAGCCTTGCAGGAAGAATGT +
Preference number: 1 (lower is better)
Translates to: DKDGRGCSCTKTLAS*ADLFVGSQALQEEC
Trigger: ACATTCTTCCTGCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTTTGTGCAGGAACAGCCCCTCCCGTCTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp TGTGAAGATAATGATAGATGGCCCAAGGGAATGTGCTGCTGGTGGTaGCTCATCTCAGAGCTGAGGGCAGTCCCTCAGGGAAACATTTGG +
Preference number: 1 (lower is better)
Translates to: CEDNDRWPKGMCCWW*LISELRAVPQGNIW
Trigger: CCAAATGTTTCCCTGAGGGACTGCCCTCAGCTCTGAGATGAGTCACCACCAGCAGCACATTCCCTTGGGCCATCTATCATTATCTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp TATGCAGAGGTTGGACTCAAGGCGATCGCAGCACTCAATCTGGTGTaGTCATCAGCGTCATCTGGGAGCAGCTTCAAAAACATTCTCAGC +
Preference number: 1 (lower is better)
Translates to: YAEVGLKAIAALNLV*SSASSGSSFKNILS
Trigger: GCTGAGAATGTTTTTGAAGCTGCTCCCAGATGACGCTGATGATCACACCAGATTGAGTGCTGCGATCGCCTTGAGTCCAACCTCTGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp GACAAACTCTGGTTTTCTCCTCCAATTGTAGCAGAGACAGCGAAGTaGCACTCCAAGCCACCCTACCCTTCATTCTTACTAGAAGAGCCC +
Preference number: 1 (lower is better)
Translates to: DKLWFSPPIVAETAK*HSKPPYPSFLLEEP
Trigger: GGGCTCTTCTAGTAAGAATGAAGGGTAGGGTGGCTTGGAGTGGCACTTCGCTGTCTCTGCTACAATTGGAGGAGAAAACCAGAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp ACAGTGAAAGGCAAAGGGTCAGTGTGTGTGAGACAGCAATGGTGCTaGGTATCAGGCCCTCTTAGGTCCTCAGTTTCCCCTCTACTTAAA +
Preference number: 1 (lower is better)
Translates to: TVKGKGSVCVRQQWC*VSGPLRSSVSPLLK
Trigger: TTTAAGTAGAGGGGAAACTGAGGACCTAAGAGGGCCTGATACCCAGCACCATTGCTGTCTCACACACACTGACCCTTTGCCTTTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CAAACCACAGCTGAAGCTCTTATCCTGTGCTGGGCATTGGGGGTGTaGAGTTCTGTCATTCATGACCGAGGACCTCATCATGAGACATTA +
Preference number: 1 (lower is better)
Translates to: QTTAEALILCWALGV*SSVIHDRGPHHETL
Trigger: TAATGTCTCATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CCTGAGAGATGGAATTGGGTCAGGTCATCCTTGACCCATTTCCTCTaGAAGGGAGTCGGGTGTCAGGAAACACATTTGCCTTTGGGTTTT +
Preference number: 1 (lower is better)
Translates to: PERWNWVRSSLTHFL*KGVGCQETHLPLGF
Trigger: AAAACCCAAAGGCAAATGTGTTTCCTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GAGATTATCCTTGAGCATGGACACGCCAACCCAGATGATCCCCAGTaGGGAAAAGTGGGCTTCTCAGTTTGGCATTTCCAACCACACATT +
Preference number: 1 (lower is better)
Translates to: EIILEHGHANPDDPQ*GKVGFSVWHFQPHI
Trigger: AATGTGTGGTTGGAAATGCCAAACTGAGAAGCCCACTTTTCCCCACTGGGGATCATCTGGGTTGGCGTGTCCATGCTCAAGGATAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TTCTTTATGGAGAATGCCAGGGAGAGGCATAAAAACTCTGGACTTTaGGTAAAACGTCCTGAGCCCGATGTGGTCTCCCTGGCTTCTGAG +
Preference number: 1 (lower is better)
Translates to: FFMENARERHKNSGL*VKRPEPDVVSLASE
Trigger: CTCAGAAGCCAGGGAGACCACATCGGGCTCAGGACGTTTTACCCAAAGTCCAGAGTTTTTATGCCTCTCCCTGGCATTCTCCATAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp CACTGTATAAAAAGTAAGTGTCTTCTGGGAACGCTGACACAGCACTaGTATGGATGCAGCTCTGCAGTCTTTGCCCTGCCCCTGTTTCCA +
Preference number: 1 (lower is better)
Translates to: HCIKSKCLLGTLTQH*YGCSSAVFALPLFP
Trigger: TGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGACACTTACTTTTTATACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
3UTR GCA 90 bp GGGATTCTGTTACTCGTGGCTGAATCTAGGGATTTCTCTTCCAGATaGGAGCCCACGCGCACAATCCTAGGATACCTAATATTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: GILLLVAESRDFSSR*EPTRTILGYLIFQG
Trigger: TCCCTGAAATATTAGGTATCCTAGGATTGTGCGCGTGGGCTCGCATCTGGAAGAGAAATCCCTAGATTCAGCCACGAGTAACAGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TCGTTTATGCAGAGGTTGGACTCAAGGCGATCGCAGCACTCAATCTaGTGTGATCATCAGCGTCATCTGGGAGCAGCTTCAAAAACATTC +
Preference number: 1 (lower is better)
Translates to: SFMQRLDSRRSQHSI*CDHQRHLGAASKTF
Trigger: GAATGTTTTTGAAGCTGCTCCCAGATGACGCTGATGATCACACCAGATTGAGTGCTGCGATCGCCTTGAGTCCAACCTCTGCATAAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTaGCTCACGGCAGCTGTTGCTTTGCTGGTTACTGCTAGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: SVEVKGQISTKGLNF*LTAAVALLVTARGR
Trigger: TCTCCCTCTAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR TCA 90 bp GTTTCCCCTCTACTTAAAGGGCCTTTCTGGGTCTATAATACCTTATaGTTCCAAAGCCGGACAGAAGGTCCGAGGAAATCCCCTCGTATT +
Preference number: 1 (lower is better)
Translates to: VSPLLKGPFWVYNTL*FQSRTEGPRKSPRI
Trigger: AATACGAGGGGATTTCCTCGGACCTTCTGTCCGGCTTTGGAATCATAAGGTATTATAGACCCAGAAAGGCCCTTTAAGTAGAGGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp AAAAAGAGGGCATCGTGTCTAAACCAGCCCAAGGAAATTCCCAGATaGCACAGATCTAAGGGGTCATCTGACCTTCCCTTCTTTATGGAG +
Preference number: 1 (lower is better)
Translates to: KKRASCLNQPKEIPR*HRSKGSSDLPFFME
Trigger: CTCCATAAAGAAGGGAAGGTCAGATGACCCCTTAGATCTGTGTCATCTGGGAATTTCCTTGGGCTGGTTTAGACACGATGCCCTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TTTAATGTAATTCAACAAACCACAGCTGAAGCTCTTATCCTGTGCTaGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCT +
Preference number: 1 (lower is better)
Translates to: FNVIQQTTAEALILC*ALGVWSSVIHDRGP
Trigger: AGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTGTTGAATTACATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TGCACTAAGCAATCCTCAAGCTGCTCTCTTCTCCCAACCATCTCCTaGGTTCCCAAACTTTCAGACAGCATGTTTTTCCAGGAAGAATAC +
Preference number: 1 (lower is better)
Translates to: CTKQSSSCSLLPTIS*VPKLSDSMFFQEEY
Trigger: GTATTCTTCCTGGAAAAACATGCTGTCTGAAAGTTTGGGAACCCAGGAGATGGTTGGGAGAAGAGAGCAGCTTGAGGATTGCTTAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GTCCTAACCTGTAAAATGGGTACAAAGTTGGAACAAGACAGTCTATaGAAGCCCTCCAACTCTGACAGCCTGAAGAATCCAGGTATCCTC +
Preference number: 1 (lower is better)
Translates to: VLTCKMGTKLEQDSL*KPSNSDSLKNPGIL
Trigger: GAGGATACCTGGATTCTTCAGGCTGTCAGAGTTGGAGGGCTTCCATAGACTGTCTTGTTCCAACTTTGTACCCATTTTACAGGTTAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp ACCCACAGAATTAAGCCCTCTTTCAAAGCAGGTTATCTGCTATCCTaGGAAAAAGAGGGCATCGTGTCTAAACCAGCCCAAGGAAATTCC +
Preference number: 1 (lower is better)
Translates to: THRIKPSFKAGYLLS*EKEGIVSKPAQGNS
Trigger: GGAATTTCCTTGGGCTGGTTTAGACACGATGCCCTCTTTTTCTCAGGATAGCAGATAACCTGCTTTGAAAGAGGGCTTAATTCTGTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp CTCTTCCACGTTGCAGCTCAGAGGCCTTTCATTACATCTGAATTCTaGGATTCGCTTTGGAGAAGAGGTTGCCATGAAAGTGACATGTTA +
Preference number: 1 (lower is better)
Translates to: LFHVAAQRPFITSEF*DSLWRRGCHESDML
Trigger: TAACATGTCACTTTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAATGAAAGGCCTCTGAGCTGCAACGTGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp AATTTAGGACCCACAGAATTAAGCCCTCTTTCAAAGCAGGTTATCTaGTATCCTGAGAAAAAGAGGGCATCGTGTCTAAACCAGCCCAAG +
Preference number: 1 (lower is better)
Translates to: NLGPTELSPLSKQVI*YPEKKRASCLNQPK
Trigger: CTTGGGCTGGTTTAGACACGATGCCCTCTTTTTCTCAGGATAGCAGATAACCTGCTTTGAAAGAGGGCTTAATTCTGTGGGTCCTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp GCAGCTCAGAGGCCTTTCATTACATCTGAATTCTGGGATTCGCTTTaGAGAAGAGGTTGCCATGAAAGTGACATGTTATTGTTCTTGCTT +
Preference number: 1 (lower is better)
Translates to: AAQRPFITSEFWDSL*RRGCHESDMLLFLL
Trigger: AAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAATGAAAGGCCTCTGAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp TTTTCCAAGATTTGCACCCAGGAGCTCCTCAAGCTCAAGAAGAAATaGAAGCAAATATGCATTGCCTGGGCTGAATCCAAACACAAAGAA +
Preference number: 1 (lower is better)
Translates to: FSKICTQELLKLKKK*KQICIAWAESKHKE
Trigger: TTCTTTGTGTTTGGATTCAGCCCAGGCAATGCATATTTGCTTTCATTTCTTCTTGAGCTTGAGGAGCTCCTGGGTGCAAATCTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CGCTTTGGAGAAGAGGTTGCCATGAAAGTGACATGTTATTGTTCTTaGTTTCTAGGGTTGACTGCAGACCAAGTCAACAATACCACAAAA +
Preference number: 1 (lower is better)
Translates to: RFGEEVAMKVTCYCS*FLGLTADQVNNTTK
Trigger: TTTTGTGGTATTGTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCTCCAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp AGAATAATTGCCTGGCTCTCCTTTAAGCAAAGGAGATTGCACTTGTaGTTGGAAGCACCAGTAACTGGGCTGTTACGTTATATTACAAGT +
Preference number: 1 (lower is better)
Translates to: RIIAWLSFKQRRLHL*LEAPVTGLLRYITS
Trigger: ACTTGTAATATAACGTAACAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAATTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 90 bp TGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCTaGCTCTCCTTTAAGCAAAGGAGATTGCACTTGTGCTTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: WLLKRLETKVIRIIA*LSFKQRRLHLCLEA
Trigger: TGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 90 bp AAATCATTTATGCAGCATCTACATGCACATATACACACACAAGTGTaGACGCATACACAAACACACACACACAGACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: KSFMQHLHAHIHTQV*THTQTHTHRHTHTH
Trigger: GTGTGTGTGTGTGTGTCTGTGTGTGTGTGTTTGTGTATGCGTTCACACTTGTGTGTGTATATGTGCATGTAGATGCTGCATAAATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 90 bp CCTTTCATTACATCTGAATTCTGGGATTCGCTTTGGAGAAGAGGTTaGCATGAAAGTGACATGTTATTGTTCTTGCTTTCTAGGGTTGAC +
Preference number: 1 (lower is better)
Translates to: PFITSEFWDSLWRRG*HESDMLLFLLSRVD
Trigger: GTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAATGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGGACTCAGGGTCCCCTaGGAGGAGGTGGCAGGCCGT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSGLRVP*EEVAGR
Trigger: ACGGCCTGCCACCTCCTCTCAGGGGACCCTGAGTCC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCCCCAGCCCAGGTGGTaGATGGAGCCCAGCTCGCCT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSPQPRW*MEPSSP
Trigger: AGGCGAGCTGGGCTCCATGCACCACCTGGGCTGGGG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCGATCCCTGGCCCCTaGCGTGGCAGATGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASIPGP*RGRCFP
Trigger: AGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp AGACAGTGGGTACCTGCTCCCGTCCCCTGGGACCTCATCCTGGTGTaGCCAGCTCCCTTCAGCGGTGGGAGTCAACGGACTTCCCCGCAG +
Preference number: 2 (lower is better)
Translates to: RQWVPAPVPWDLILV*PAPFSGGSQRTSPQ
Trigger: CTGCGGGGAAGTCCGTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCCCACCCACCCACCCTaGCACTGCTCTGACTTCCAG +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSPTHPP*HCSDFQ
Trigger: CTGGAAGTCAGAGCAGTGGCAGGGTGGGTGGGTGGG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAGCCCAACACACTTCTaGCCTCCTGAGGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWSPTHF*PPEAGS
Trigger: TGACCCAGCCTCAGGAGGTCAGAAGTGTGTTGGGCT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTCTGAGGCAGGCTGCTaGCCCTCTCCACACTCTGGT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSSEAGC*PSPHSG
Trigger: ACCAGAGTGTGGAGAGGGTCAGCAGCCTGCCTCAGA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGGCTCCGGCATGCAATaGCTCCACACAGCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWGSGMQ*LHTAVL
Trigger: AAGCACAGCTGTGTGGAGGCATTGCATGCCGGAGCC...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAGTAAGGTGGTCGCCTaGAGAGAACGGCCCTATGGC +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWSKVVA*RERPYG
Trigger: GCCATAGGGCCGTTCTCTGCAGGCGACCACCTTACT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCAGCTCGCCTACACCTaGCTGGAGAGGGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSQLAYT*LERAWF
Trigger: AAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGTAATCCCAGTGCTTTaGGACGCTGAGGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWVIPVL*DAEVGG
Trigger: TCCGCCCACCTCAGCGTCCCAAAGCACTGGGATTAC...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGAGCAGGGTACCACCTaGGGGCCATGGTGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSEQGTT*GPWWPV
Trigger: AACTGGCCACCATGGCCCTCAGGTGGTACCCTGCTC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGGCACAGGGCACTTCTaGCCACCAACCAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSGTGHF*PPTRGE
Trigger: CTCTCCCCTGGTTGGTGGGCAGAAGTGCCCTGTGCC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTGTTTCCAGTTTCCCTaGCGAGCATCCTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: HGAQLAYTWLERAWFWVACFQFP*RASSGG
Trigger: CCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGAGAGGGCCTGGTTTTaGGTGGCCTGGGCCCTAGTC +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSERAWF*VAWALV
Trigger: GACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGTTGCTGTCTCTCGGCTaGACAAGGTGGTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWLLSLG*TRWLGW
Trigger: CCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAA...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GCTCAAGCACCCACGAGCACCAAACGAGCACATTCTTTGTCTCCCTaGTCGGTGTTCCCTCTGTCCCGCCACCACTGGGCACCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: AQAPTSTKRAHSLSP*SVFPLSRHHWAPPR
Trigger: CCTGGGAGGTGCCCAGTGGTGGCGGGACAGAGGGAACACCGACAAGGGAGACAAAGAATGTGCTCGTTTGGTGCTCGTGGGTGCTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GCCCAAGGGGCTCAAGCACCCACGAGCACCAAACGAGCACATTCTTaGTCTCCCTTGTCGGTGTTCCCTCTGTCCCGCCACCACTGGGCA +
Preference number: 2 (lower is better)
Translates to: AQGAQAPTSTKRAHS*SPLSVFPLSRHHWA
Trigger: TGCCCAGTGGTGGCGGGACAGAGGGAACACCGACAAGGGAGACAAAGAATGTGCTCGTTTGGTGCTCGTGGGTGCTTGAGCCCCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCTCCAGCCTGGGCTTTaGGGTCCTCATTGCCCCATG +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSLQPGL*GPHCPM
Trigger: CATGGGGCAATGAGGACCCCAAAGCCCAGGCTGGAG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCAAGCTGTCATCCAGTaGGTGCAGAGACCGACCCCC +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSQAVIQ*VQRPTP
Trigger: GGGGGTCGGTCTCTGCACCCACTGGATGACAGCTTG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GCAGGGTACCACCTGAGGGCCATGGTGGCCAGTTGGGCTCTGGCCTaGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTCTTCCCCATT +
Preference number: 2 (lower is better)
Translates to: AGYHLRAMVASWALA*LPLTVWPWISFFPI
Trigger: AATGGGGAAGAAACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGCCCTCAGGTGGTACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp CATACCACAATGAGCAGGGTACCACCTGAGGGCCATGGTGGCCAGTaGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAG +
Preference number: 2 (lower is better)
Translates to: HTTMSRVPPEGHGGQ*GSGLAASHCVAMDQ
Trigger: CTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGCCCTCAGGTGGTACCCTGCTCATTGTGGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGGTGGGCGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCGCCCACC...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGACATAATCCCAGAATaGAGAGCCAGCGTTTGGGCA +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWDIIPE*RASVWA
Trigger: TGCCCAAACGCTGGCTCTTCATTCTGGGATTATGTC...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATCTCCTCGCCTCGTCTaGTGTCAGTACCTGCCCATC +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSSPRLV*CQYLPI
Trigger: GATGGGCAGGTACTGACAGCAGACGAGGCGAGGAGA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAGGTCACTCTCACACTaGAAGGATGATGCCTTCGAG +
Preference number: 2 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWRSLSH*KDDAFE
Trigger: CTCGAAGGCATCATCCTTGCAGTGTGAGAGTGACCT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTG +
Preference number: 2 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPGTDGG*RRKSPV
Trigger: CACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
3UTR-3UTR TCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCACAGTCCTGGCCAATaGGATGAGAACGGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSHSPGQ*DENGSG
Trigger: GCCACTTCCGTTCTCATCTCATTGGCCAGGACTGTG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCACAGCTCTGCAGTCTTTaGCCTGCCCCTGTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSQLCSL*PAPVSS
Trigger: ACTGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTG...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGACTGCCAGTGGGTGCTaGCCACCGAGTGTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVTASGC*PPSVPH
Trigger: GTGAGGCACACTCGGTGGGCAGCACCCACTGGCAGT...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGTGAAATGTCCTAGTTaGCTAGGACCCGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSVKCPS*LGPGSP
Trigger: TGGGGACCCGGGTCCTAGGCAACTAGGACATTTCAC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCCTTTTCCTGCCCTCTaGCTGTCATTCTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSPFPAL*LSFSLA
Trigger: GGCCAAGGAGAATGACAGGCAGAGGGCAGGAAAAGG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCACCACAAAATCCCATTaGAGGGAGCCATTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: HGAQLAYTWLERAWFWVATTKSH*REPLLG
Trigger: TCCTAGCAATGGCTCCCTCCAATGGGATTTTGTGGT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCCCCTGGCCCCTGGCGTaGCAGATGCTTCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTRHSATFLPWPLA*QMLPFS
Trigger: TGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGG...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCTCTCACCTCTGTCCTaGACCCTCGATCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVLSPLS*TLDPWP
Trigger: GGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCCTCGGGAACTCACATaGAGTCACCGCGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLPRELT*SHRGPS
Trigger: GCTGGGGCCGCGGTGACTCCATGTGAGTTCCCGAGG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCCAGGACTGGACATCTaGGCTTGGCTGCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVPGLDI*AWLPGL
Trigger: GAGCCCAGGCAGCCAAGCCCAGATGTCCAGTCCTGG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATCTGACTTCCAGGACTaGACATCTGGGCTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSSDFQD*TSGLGC
Trigger: GCAGCCAAGCCCAGATGTCCAGTCCTGGAAGTCAGA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCATACAGCCAAGGCATaGAGGGTCAGGACAAACTCT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSHTAKA*RVRTNS
Trigger: AGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTTGAGGGAAGGAACTTaGTGGAAGGATGGAGAGTCT +
Preference number: 2 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSLREGT*WKDGES
Trigger: AGACTCTCCATCCTTCCATCAAGTTCCTTCCCTCAA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCCGAGGACCTCATCATaGGACATTAGAGGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGPRTSS*DIRGAH
Trigger: ATGAGCCCCTCTAATGTCTCATGATGAGGTCCTCGG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCGCTCCTGGCCTCCCCTaGACCCAGTTGCCACAACTT +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCAPGLP*TQLPQL
Trigger: AAGTTGTGGCAACTGGGTTCAGGGGAGGCCAGGAGC...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAATATGGATGCAGCTCTaGAGTCTTTGCCCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSIWMQL*SLCPAP
Trigger: AGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATAT...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATGGACCCTCGATCCCTaGCCCCTGGCGTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRWTLDP*PLAWQM
Trigger: CATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCTTGACCCATTTCCTCTaGAAGGGAGTCGGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGLTHFL*KGVGCQ
Trigger: CTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAA...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp CCCATCCCCTGCAAGGCAGGGCAGGATGATGCCACCGGTCCCAGTTaGCCAGCTGTAAAATCCATTAGGGAACATCCAGCACAAACCACC +
Preference number: 2 (lower is better)
Translates to: PIPCKAGQDDATGPS*PAVKSIREHPAQTT
Trigger: GGTGGTTTGTGCTGGATGTTCCCTAATGGATTTTACAGCTGGCAAACTGGGACCGGTGGCATCATCCTGCCCTGCCTTGCAGGGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGTCTTCTGGGAACGCTaGCACAGCACTGATATGGAT +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSVFWER*HSTDMD
Trigger: ATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGAC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGGGAACTCCAGCCAGCTaGCTGAAGCAAACGGGGCCT +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLGTPAS*LKQTGP
Trigger: AGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCC...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTAGACAGCAATGGTGCTaGGTATCAGGCCCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVRQQWC*VSGPLR
Trigger: CCTAAGAGGGCCTGATACCCAGCACCATTGCTGTCT...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGATTTTCCAGTAAGGTaGTCGCCTGCAGAGAACGGC +
Preference number: 2 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVDFPVR*SPAENG
Trigger: GCCGTTCTCTGCAGGCGACCACCTTACTGGAAAATC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCTGCCTCTCACTGTGTaGCCATGGATCAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: ASVSERKPRILGGNRGPSLPLTV*PWISFF
Trigger: GAAGAAACTGATCCATGGCCACACAGTGAGAGGCAG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAAGGGTCAGTGTGTGTaGGACAGCAATGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCKGQCV*DSNGAG
Trigger: CCCAGCACCATTGCTGTCTCACACACACTGACCCTT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCCAGCTTCCTTCCCCTaGAGATGCCCGGAGACAAGC +
Preference number: 2 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLPASFP*RCPETS
Trigger: GCTTGTCTCCGGGCATCTTCAGGGGAAGGAAGCTGG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGCTTCCCTTCTCACCTaGAGCTCGAGCTCTCGACGA +
Preference number: 2 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSASLLT*SSSSRR
Trigger: TCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCCTTGGCCCCCAGGGTaGAGAGGGTCCCCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFPWPPG*RGSPAS
Trigger: GGAAGCTGGGGACCCTCTGCACCCTGGGGGCCAAGG...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATCATCTCCACAGAGGTaGTGGGGATGGGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRSSPQR*WGWAGL
Trigger: CAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCATCCCAGAGTTCCCTaGCAAGGAAGGGATGAGTTT +
Preference number: 2 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVHPRVP*QGRDEF
Trigger: AAACTCATCCCTTCCTTGCCAGGGAACTCTGGGATG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCAACGGCCCTATGGCTTaGTTTCCAGATATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGNGPMA*FPDIWR
Trigger: TCTCCAGATATCTGGAAACCAAGCCATAGGGCCGTT...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACATCCGAATGGCCAGTaGGAAGGCAGGGCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRHPNGQ*EGRASE
Trigger: CTCACTGGCCCTGCCTTCCCACTGGCCATTCGGATG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCTGGCCTGGTGTTCCTaGTTGCTGAGCTCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCLAWCS*LLSSEA
Trigger: TGCTTCTGAGCTCAGCAACCAGGAACACCAGGCCAG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp TGGACACGACAATCAACATCCACAGCCTTAGCCTTAAGCCTCCCCTaGAAGCCTCCAGGAGCCTCCCAAGCTGTGTTGTTCTGTGACCCA +
Preference number: 2 (lower is better)
Translates to: WTRQSTSTALALSLP*KPPGASQAVLFCDP
Trigger: TGGGTCACAGAACAACACAGCTTGGGAGGCTCCTGGAGGCTTCAAGGGGAGGCTTAAGGCTAAGGCTGTGGATGTTGATTGTCGTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGGCAGAGAGTTCTGCCTaGTTGCCCAGGGAACTCCAT +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLAESSA*LPRELH
Trigger: ATGGAGTTCCCTGGGCAAGCAGGCAGAACTCTCTGC...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGCTGGAAGCCAGGGCTaGCCAGTTGTGCTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRAGSQG*PVVLLH
Trigger: ATGCAGAAGCACAACTGGGCAGCCCTGGCTTCCAGC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTGTGTGAGACAGCAATaGTGCTGGGTATCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTRHSATFLCVRQQ*CWVSGP
Trigger: AGGGCCTGATACCCAGCACCATTGCTGTCTCACACA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATTTTTAAACACCCTCTaGGTGCTGCATGTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSFLNTL*VLHVPF
Trigger: GAAAGGCACATGCAGCACCCAGAGGGTGTTTAAAAA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGAAGATAATGATAGATaGCCCAAGGGAATGTGCTGC +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSEDNDR*PKGMCC
Trigger: GCAGCACATTCCCTTGGGCCATCTATCATTATCTTC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp ACCTGCTGTCTCCAGAGTCTTTTCTGGGAAGCGGAAGGAGAGCCCTaGAGACAGGCTGAACTCCAAAGCAGATTCTCTCACCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: TCCLQSLFWEAEGEP*RQAELQSRFSHLCP
Trigger: AGGACAGAGGTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGGAGACAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp CTGAAGCAAACGGGGCCTGAGAGATGGAATTGGGTCAGGTCATCCTaGACCCATTTCCTCTGGAAGGGAGTCGGGTGTCAGGAAACACAT +
Preference number: 2 (lower is better)
Translates to: LKQTGPERWNWVRSS*THFLWKGVGCQETH
Trigger: ATGTGTTTCCTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATGTGAGACAGCAATGGTaGTGGGTATCAGGCCCTCTT +
Preference number: 2 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHVRQQW*WVSGPL
Trigger: AAGAGGGCCTGATACCCAGCACCATTGCTGTCTCAC...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCGGAGGTGGCAGGCCGTaGTGGCAGGTCACTCTCACA +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFGGGRP*WQVTLT
Trigger: TGTGAGAGTGACCTGCCACCACGGCCTGCCACCTCC...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp ATCTCAACTAAGGGTCTAAATTTCTGGCTCACGGCAGCTGTTGCTTaGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: ISTKGLNFWLTAAVA*LVTARGRRCFQVQL
Trigger: CAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTTAGTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR TCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGTCTTCCCTTTCTCCCTaGATGAAACACACAGAGCAG +
Preference number: 2 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVSSLSP*MKHTEQ
Trigger: CTGCTCTGTGTGTTTCATTCAGGGAGAAAGGGAAGA...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTTCGAGCTCTCGACGATaGAAACTCAGTCCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSSSRR*KLSPGA
Trigger: TGCTCCTGGACTGAGTTTTCATCGTCGAGAGCTCGA...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCGGAAGGAGAGCCCTTaGGACAGGCTGAACTCCAAA +
Preference number: 2 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRRKESP*DRLNSK
Trigger: TTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCATATGGGGATGCACATaGGACCTTCTTGGCCCCATA +
Preference number: 2 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSIWGCT*DLLGPI
Trigger: TATGGGGCCAAGAAGGTCTCATGTGCATCCCCATAT...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCAGCTTTCTCACCTGTaGCATAGGAAAGTGGACACC +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLQLSHL*HRKVDT
Trigger: GGTGTCCACTTTCCTATGTCACAGGTGAGAAAGCTG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGTCAAGGGCAATGACTaGAATCCCGTTGGGCATCTT +
Preference number: 2 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSVKGND*NPVGHL
Trigger: AAGATGCCCAACGGGATTGCAGTCATTGCCCTTGAC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCACATGAGACCTTCTTaGCCCCATAGACCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHMRPS*PHRPAV
Trigger: GACAGCAGGTCTATGGGGCCAAGAAGGTCTCATGTG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTTCCTGTGCTGGGCATTaGGGGTGTGGAGTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRSCAGH*GCGVLS
Trigger: TGACAGAACTCCACACCCCCAATGCCCAGCACAGGA...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGAATGCTTGTTGCATTaGATTAAGATGCAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGECLLH*IKMQRG
Trigger: GCCTCTTTGCATCTTAATCCAATGCAACAAGCATTC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTCCAAAGGAAGCCGCTaGCATCATAGGGTGACAGCC +
Preference number: 2 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQSKGSR*HHRVTA
Trigger: GGCTGTCACCCTATGATGCCAGCGGCTTCCTTTGGA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGGTTTAAGCCAAAGTTaGTCGGGGGAGGAGGGATTC +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRGLSQS*SGEEGF
Trigger: GAATCCCTCCTCCCCCGACCAACTTTGGCTTAAACC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCCTGCACAAAAACTCTaGCAAGCTGGGCAGATCTAT +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCPAQKL*QAGQIY
Trigger: ATAGATCTGCCCAGCTTGCCAGAGTTTTTGTGCAGG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGCTGGACAAGGTGGTTaGGTTGGGGATGATGTTACC +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRAGQGG*VGDDVT
Trigger: GGTAACATCATCCCCAACCCAACCACCTTGTCCAGC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp AGGACTGTGAGGTCCATTGGGTCAGAGAGTGGGGAGTGGGAAAGGTaGGTGATCAACTATTTTGATGTCTGTCTTGGAAGCAGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: RTVRSIGSESGEWER*VINYFDVCLGSSKG
Trigger: GCCCTTGCTGCTTCCAAGACAGACATCAAAATAGTTGATCACCAACCTTTCCCACTCCCCACTCTCTGACCCAATGGACCTCACAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTGCCATTTCTACTTCTaGCACGTGGCAGCTACTCTT +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLCHFYF*HVAATL
Trigger: AAGAGTAGCTGCCACGTGTCAGAAGTAGAAATGGCA...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTAAAAAGTACGCTTTCTaGGTCAGCCCCAAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVKKYAF*VSPKGS
Trigger: AGAGCCCTTGGGGCTGACTCAGAAAGCGTACTTTTT...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCAAAGGAGACCAGAATTaGGAGCTTTCTGAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSKGDQN*ELSERA
Trigger: AGCCCTCTCAGAAAGCTCTCAATTCTGGTCTCCTTT...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCTTTTTGAAAGTGTCATaGCCATATTGCAGGCGCTCG +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCFLKVS*PYCRRS
Trigger: CGAGCGCCTGCAATATGGTCATGACACTTTCAAAAA...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAACATGTTATTGTTCTTaGTTTCTAGGGTTGACTGCA +
Preference number: 2 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSTCYCS*FLGLTA
Trigger: TGCAGTCAACCCTAGAAAGCAAGAACAATAACATGT...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCGGGGATCTGCTCTCTaGAGCTCTTCTTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQRGSAL*SSSFSP
Trigger: GGGAGAAAAAGAAGAGCTGCAGAGAGCAGATCCCCG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGAGGGAAACATTTGGATaGTCCGCTCTGGCCATGTCC +
Preference number: 2 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQRETFG*SALAMS
Trigger: GGACATGGCCAGAGCGGAGCATCCAAATGTTTCCCT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATCAGAGAACGGCCCTATaGCTTGGTTTCCAGATATCT +
Preference number: 2 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHQRTAL*LGFQIS
Trigger: AGATATCTGGAAACCAAGCCATAGGGCCGTTCTCTG...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCATTGCCCCATGTTGTaGGTTTGGACCCACTTCAGC +
Preference number: 2 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRHCPML*VWTHFS
Trigger: GCTGAAGTGGGTCCAAACCCACAACATGGGGCAATG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp TGGTCAGTGAAAGCTTTGCCACTAGCGCTTGTCCTCAGAGGAAAGTaGGGAACCATGAAGGCACAGCCTGCCATTCCCATTCTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: WSVKALPLALVLRGK*GTMKAQPAIPILFF
Trigger: GAAAAAGAGAATGGGAATGGCAGGCTGTGCCTTCATGGTTCCCAACTTTCCTCTGAGGACAAGCGCTAGTGGCAAAGCTTTCACTGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp TGGAAAGGCAGATGGGCAAAGTCAAGGGCAATGACTGCAATCCCGTaGGGCATCTTCAATGGCACAAACCCTTTTCTTCGTCTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: WKGRWAKSRAMTAIP*GIFNGTNPFLRLQA
Trigger: AGCTTGCAGACGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTGCCCATCTGCCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GGGGCTGTTCCTGCACAAAAACTCTGGCAAGCTGGGCAGATCTATTaGTCGGTTCCCAAGCCTTGCAGGAAGAATGTCTACAATGCCTTT +
Preference number: 2 (lower is better)
Translates to: GAVPAQKLWQAGQIY*SVPKPCRKNVYNAF
Trigger: AAAGGCATTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTTTGTGCAGGAACAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCAAGCTTAGCCCTGGGTaGTCACCGCCAGGACAAAGA +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFKLSPG*SPPGQR
Trigger: TCTTTGTCCTGGCGGTGAGCACCCAGGGCTAAGCTT...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCCTGCTTTGGAATGTTaGCCTCCAGCTAACTCACCA +
Preference number: 2 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRPALEC*PPANSP
Trigger: TGGTGAGTTAGCTGGAGGGCAACATTCCAAAGCAGG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCAACTTGATGGAAGGATaGAGAGTCTACAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSNLMEG*RVYRAC
Trigger: ACAAGCCCTGTAGACTCTCCATCCTTCCATCAAGTT...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCCTGAGAGATGGAATTaGGTCAGGTCATCCTTGACC +
Preference number: 2 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRPERWN*VRSSLT
Trigger: GGTCAAGGATGACCTGACCCAATTCCATCTCTCAGG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGAACAAGACAGTCTATaGAAGCCCTCCAACTCTGAC +
Preference number: 2 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLEQDSL*KPSNSD
Trigger: GTCAGAGTTGGAGGGCTTCCATAGACTGTCTTGTTC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GTAATTCAACAAACCACAGCTGAAGCTCTTATCCTGTGCTGGGCATaGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCAT +
Preference number: 2 (lower is better)
Translates to: VIQQTTAEALILCWA*GVWSSVIHDRGPHH
Trigger: ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTGTTGAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp AAAACTCTGGCAAGCTGGGCAGATCTATTTGTCGGTTCCCAAGCCTaGCAGGAAGAATGTCTACAATGCCTTTGGGTAGACCTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: KTLASWADLFVGSQA*QEECLQCLWVDLKD
Trigger: GTCCTTCAGGTCTACCCAAAGGCATTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCACGCTGACACAGCACTaGTATGGATGCAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFTLTQH*YGCSSA
Trigger: TGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGT...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATTTTTCATGTAGTTGCTaGCATGAGCGGATCATACCA +
Preference number: 2 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHFSCSC*HERIIP
Trigger: TGGTATGATCCGCTCATGTCAGCAACTACATGAAAA...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAAAAACTTCTGGAACATaGACAAGCGACTGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRKTSGT*TSDCLL
Trigger: AAGGAGGCAGTCGCTTGTGCATGTTCCAGAAGTTTT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATTGCTTGGTCCACACTaGATGAAACACACCATTCCA +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRLLGPH*MKHTIP
Trigger: TGGAATGGTGTGTTTCATGCAGTGTGGACCAAGCAA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTTTCTGGGATTCGCTTTaGAGAAGAGGTTGCCATGAA +
Preference number: 2 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVFWDSL*RRGCHE
Trigger: TTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAA...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAATTACATCTGAATTCTaGGATTCGCTTTGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTITSEF*DSLWRR
Trigger: TCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAAT...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCGGCAGCTACTCTTTGTaGTTGTTAAAACTAGACAAG +
Preference number: 2 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCGSYSL*LLKLDK
Trigger: CTTGTCTAGTTTTAACAACCACAAAGAGTAGCTGCC...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCGAAACACATCTTTCCTaGGCACTGCCAGTGGGTGCT +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFETHLS*ALPVGA
Trigger: AGCACCCACTGGCAGTGCCCAGGAAAGATGTGTTTC...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATGGAAGCACCAGTAACTaGGCTGTTACGTTATATTAC +
Preference number: 2 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHGSTSN*AVTLYY
Trigger: GTAATATAACGTAACAGCCCAGTTACTGGTGCTTCC...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGCCTTTCATTACATCTaGATTCTGGGATTCGCTTTG +
Preference number: 2 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLAFHYI*ILGFAL
Trigger: CAAAGCGAATCCCAGAATTCAGATGTAATGAAAGGC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGATTTAGGAAAAACATaGTCCAGTTGTAGAGCACTT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTRHSATFLDLGKT*SSCRAL
Trigger: AAGTGCTCTACAACTGGATCATGTTTTTCCTAAATC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCCTCGTATTTGTAGTTaGACAGACAAAATCCATTTG +
Preference number: 2 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVPRICS*TDKIHL
Trigger: CAAATGGATTTTGTCTGTTCAACTACAAATACGAGG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCTTTCTAGGGTTGACTaGAGACCAAGTCAACAATAC +
Preference number: 2 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLLSRVD*RPSQQY
Trigger: GTATTGTTGACTTGGTCTGCAGTCAACCCTAGAAAG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTGCAGCTGAGCACCTaGGCAGGAGTGATTCAGGCC +
Preference number: 2 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKVQLST*AGVIQA
Trigger: GGCCTGAATCACTCCTGCCCAGGTGCTCAGCTGCAC...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGTCTATAATACCTTATaGTTCCAAAGCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRVYNTL*FQSRTE
Trigger: TTCTGTCCGGCTTTGGAATCATAAGGTATTATAGAC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTGTGCCTCACCATTCTaGATGGAAATCTTAAAAATC +
Preference number: 2 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLCASPF*MEILKI
Trigger: GATTTTTAAGATTTCCATGCAGAATGGTGAGGCACA...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGTGCTGGGGATGGGCTaGCCTGGTGTTCCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVVLGMG*PGVPGC
Trigger: GCAACCAGGAACACCAGGCCAGCCCATCCCCAGCAC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGCTGAAGCCCAGAGCTaGAAGCCAGGGCTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVAEAQS*KPGLPS
Trigger: ACTGGGCAGCCCTGGCTTCCAGCTCTGGGCTTCAGC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp AAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCAAGATTaGCACCCAGGAGCTCCTCAAGCTCAAGAAGAAATGAAAGCAAAT +
Preference number: 2 (lower is better)
Translates to: KELAWKGSEILIFQD*HPGAPQAQEEMKAN
Trigger: ATTTGCTTTCATTTCTTCTTGAGCTTGAGGAGCTCCTGGGTGCAAATCTTGGAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCAAAGGGTCTAAATTTCTaGCTCACGGCAGCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPKGLNF*LTAAVA
Trigger: AGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTT...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CAA 90 bp GGAAAGAAAAACTCAAGTTGTTCCCTCGTATTGTTTCACTTGCCTTaGGTCAGTGAAAGCTTTGCCACTAGCGCTTGTCCTCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GKKNSSCSLVLFHLP*VSESFATSACPQRK
Trigger: TTTCCTCTGAGGACAAGCGCTAGTGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTTTTTCTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCGAGGTCCCTCCTTATaGTTGCTGTCTCTCGGCTGG +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVRGPSL*LLSLGW
Trigger: CCAGCCGAGAGACAGCAATCATAAGGAGGGACCTCG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCTGGAGAATGCTTGTTaGATTGGATTAAGATGCAAA +
Preference number: 2 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQLENAC*IGLRCK
Trigger: TTTGCATCTTAATCCAATGCAACAAGCATTCTCCAG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGCAGCATGCTGCCCCTaGTTTGGAATGTTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVAACCP*FGMLPS
Trigger: GGAGGGCAACATTCCAAAGCAGGGGCAGCATGCTGC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGGCTGGCCTGTCCGTaGTTTTCCAGTGGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGLACP*FSSGKV
Trigger: TACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp CTTGATATGAACCGAGATAACACACACATGTTCCGAGACAGTCGTTaGGCTCCAATACTGCTTGCCTTCCCAGAAAGCTTAATTTATTGC +
Preference number: 2 (lower is better)
Translates to: LDMNRDNTHMFRDSR*APILLAFPESLIYC
Trigger: GCAATAAATTAAGCTTTCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTGTTATCTCGGTTCATATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTATGTGCTGCTGGTGGTaGCTCATCTCAGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVMCCWW*LISELR
Trigger: CCTCAGCTCTGAGATGAGTCACCACCAGCAGCACAT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGAAGCCCTCCAACTCTaGCAGCCTGAAGAATCCAGG +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVEALQL*QPEESR
Trigger: CCTGGATTCTTCAGGCTGTCAGAGTTGGAGGGCTTC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGGATGATGTTACCATaGCAACCGGAGAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGMMLP*QPESRC
Trigger: GCACCTGCTCTCCGGTTGTCATGGTAACATCATCCC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCTCGTATTGTTTCACTTaGCTTTGGTCAGTGAAAGCT +
Preference number: 2 (lower is better)
Translates to: CLLQNKELAWKGSEILIFSYCFT*LWSVKA
Trigger: AGCTTTCACTGACCAAAGGCAAGTGAAACAATACGA...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTCTGCTGAAGCAGCCTaGAGGCACTGGCAATTGGGT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSAEAA*RHWQLG
Trigger: ACCCAATTGCCAGTGCCTGCAGGCTGCTTCAGCAGA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTCCCAGCACAAAGCCTaGCACAGGCTGGAGAATGCT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSQHKA*HRLENA
Trigger: AGCATTCTCCAGCCTGTGCCAGGCTTTGTGCTGGGA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp TCGCTTTGGAGAAGAGGTTGCCATGAAAGTGACATGTTATTGTTCTaGCTTTCTAGGGTTGACTGCAGACCAAGTCAACAATACCACAAA +
Preference number: 2 (lower is better)
Translates to: SLWRRGCHESDMLLF*LSRVDCRPSQQYHK
Trigger: TTTGTGGTATTGTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCTCCAAAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp AAAGTCATAAGAATAATTGCCTGGCTCTCCTTTAAGCAAAGGAGATaGCACTTGTGCTTGGAAGCACCAGTAACTGGGCTGTTACGTTAT +
Preference number: 2 (lower is better)
Translates to: KVIRIIAWLSFKQRR*HLCLEAPVTGLLRY
Trigger: ATAACGTAACAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAATTATTCTTATGACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTCAAAGTTGGTTTAACTaGACACCTCTGGACTCATTA +
Preference number: 2 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFQSWFN*TPLDSL
Trigger: TAATGAGTCCAGAGGTGTTCAGTTAAACCAACTTTG...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCACACACACACCCCATaGCATTGCTTGGTCCACACT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVHTHTP*HCLVHT
Trigger: AGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGAGCCCCCATCTTTTTaGGGCACATGTTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVEPPSF*GTCSQT
Trigger: AGTCTGGGAACATGTGCCCCAAAAAGATGGGGGCTC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp ATAAGAATAATTGCCTGGCTCTCCTTTAAGCAAAGGAGATTGCACTaGTGCTTGGAAGCACCAGTAACTGGGCTGTTACGTTATATTACA +
Preference number: 2 (lower is better)
Translates to: IRIIAWLSFKQRRLH*CLEAPVTGLLRYIT
Trigger: TGTAATATAACGTAACAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAATTATTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCCAAACAAGAACTGCTaGGGTCTCAGAGTCCTAACC +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVPNKNC*GLRVLT
Trigger: GGTTAGGACTCTGAGACCTCAGCAGTTCTTGTTTGG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR TCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTAAGCAGAGGTTCTGTTaGGGTGAAAGGTCAGATCTC +
Preference number: 2 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVKQRFC*GERSDL
Trigger: GAGATCTGACCTTTCACCTCAACAGAACCTCTGCTT...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCTCTGGAAAGGCAGATaGGCAAAGTCAAGGGCAATG +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVLWKGR*AKSRAM
Trigger: CATTGCCCTTGACTTTGCCCATCTGCCTTTCCAGAG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp CAAAATAAATCCTATGGAAAGAAAAACTCAAGTTGTTCCCTCGTATaGTTTCACTTGCCTTTGGTCAGTGAAAGCTTTGCCACTAGCGCT +
Preference number: 2 (lower is better)
Translates to: QNKSYGKKNSSCSLV*FHLPLVSESFATSA
Trigger: AGCGCTAGTGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTTTTTCTTTCCATAGGATTTATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 90 bp GTAAACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTaGTTTGAGGTCAGGAACCATCAGATAAATAAGCAGAGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: VNRKTVCHFAELKTQ*FEVRNHQINKQRFC
Trigger: ACAGAACCTCTGCTTATTTATCTGATGGTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTATGTGCCTTTCCACATaGAGAGAACGGGCTAAGAAA +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVMCLST*RERAKK
Trigger: TTTCTTAGCCCGTTCTCTGCATGTGGAAAGGCACAT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCAGACCACCATAAAGTaGAGTTCCTCAAAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVQTTIK*SSSKLL
Trigger: CAGAAGCTTTGAGGAACTGCACTTTATGGTGGTCTG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTACCCAGATGAAAAATTaGAGGTACAGCAAGCATCCT +
Preference number: 2 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVTQMKN*RYSKHP
Trigger: AGGATGCTTGCTGTACCTCCAATTTTTCATCTGGGT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCCCAGGTGGTGCATGGAGCCCAGCTCGCCTACACCTaGCTGGAGAGGGCCTGGTTTTGGGTGGCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: AQVVHGAQLAYT*LERAWFWVAWA
Trigger: GGCCCAGGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATGCACCACCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GGCAGAGACCGCGCAAAGCCAACTCTGTCCTCTGCCTaGCCCCGCAAGGGCTGGCCTGTCCGTGCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: GRDRAKPTLSSA*PRKGWPVRAFP
Trigger: TGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGCAGGCAGAGGACAGAGTTGGCTTTGCGCGGTCTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTaGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACA +
Preference number: 3 (lower is better)
Translates to: GPHPGVASSLQR*ESTDFPAGVGT
Trigger: TGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AGTGGGTACCTGCTCCCGTCCCCTGGGACCTCATCCTaGTGTTGCCAGCTCCCTTCAGCGGTGGGAGTCAAC +
Preference number: 3 (lower is better)
Translates to: SGYLLPSPGTSS*CCQLPSAVGVN
Trigger: GTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCCCCCGCAAGGGCTGGCCTGTCCGTGCTTTTCCAGTaGGAAGGTAGACAGACAGTGGGTACCTGCTCCCGT +
Preference number: 3 (lower is better)
Translates to: APARAGLSVLFQ*EGRQTVGTCSR
Trigger: ACGGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GGCAGCACGGGTTTCCTGCCGGTGAAATGTCCTAGTTaGCTAGGACCCGGGTCCCCAAGGGCAGAGCTCACA +
Preference number: 3 (lower is better)
Translates to: GSTGFLPVKCPS*LGPGSPRAELT
Trigger: TGTGAGCTCTGCCCTTGGGGACCCGGGTCCTAGGCAACTAGGACATTTCACCGGCAGGAAACCCGTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp TTGGACCCCCGGTCCCTGCAGGGAACTCCAGCCAGCTaGCTGAAGCAAACGGGGCCTGAGAGATGGAATTGG +
Preference number: 3 (lower is better)
Translates to: LDPRSLQGTPAS*LKQTGPERWNW
Trigger: CCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCCTGCAGGGACCGGGGGTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GTCCTCTGCCTGCCCCCGCAAGGGCTGGCCTGTCCGTaGTTTTCCAGTGGGAAGGTAGACAGACAGTGGGTA +
Preference number: 3 (lower is better)
Translates to: VLCLPPQGLACP*FSSGKVDRQWV
Trigger: TACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGCAGGCAGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GTAGACCTGAAGGACTCAGGGTCCCCTGAGAGGAGGTaGCAGGCCGTGGTGGCAGGTCACTCTCACACTGCA +
Preference number: 3 (lower is better)
Translates to: VDLKDSGSPERR*QAVVAGHSHTA
Trigger: TGCAGTGTGAGAGTGACCTGCCACCACGGCCTGCCACCTCCTCTCAGGGGACCCTGAGTCCTTCAGGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACCCCCAAGGGCTCTCCTaGGCAGCACGGGTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENPQGLS*AARVSC
Trigger: GCAGGAAACCCGTGCTGCCAAGGAGAGCCCTTGGGG...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp TTTGGATGCTCCGCTCTGGCCATGTCCCAGGCGAGCTaGTGGGCAGAGAGTTCTGCCTGCTTGCCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: FGCSALAMSQAS*WAESSACLPRE
Trigger: TTCCCTGGGCAAGCAGGCAGAACTCTCTGCCCATCAGCTCGCCTGGGACATGGCCAGAGCGGAGCATCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CAGATTCTCTCACCTCTGTCCTGGACCCTCGATCCCTaGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCT +
Preference number: 3 (lower is better)
Translates to: QILSPLSWTLDP*PLAWQMLPFSP
Trigger: AGGTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAGAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp ATCCCAGAGTTCCCTGGCAAGGAAGGGATGAGTTTCTaGCCTCGGGAACTCACATGGAGTCACCGCGGCCCC +
Preference number: 3 (lower is better)
Translates to: IPEFPGKEGMSF*PRELTWSHRGP
Trigger: GGGGCCGCGGTGACTCCATGTGAGTTCCCGAGGCCAGAAACTCATCCCTTCCTTGCCAGGGAACTCTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp TTCCTTCCCCTGAAGATGCCCGGAGACAAGCATCTTTaGACCCCCGGTCCCTGCAGGGAACTCCAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: FLPLKMPGDKHL*TPGPCRELQPA
Trigger: AGCTGGCTGGAGTTCCCTGCAGGGACCGGGGGTCCAAAGATGCTTGTCTCCGGGCATCTTCAGGGGAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CCACAGGCTGGTGTCTGTTGTGCTGAAGCCCAGAGCTaGAAGCCAGGGCTGCCCAGTTGTGCTTCTGCATGG +
Preference number: 3 (lower is better)
Translates to: PQAGVCCAEAQS*KPGLPSCASAW
Trigger: CCATGCAGAAGCACAACTGGGCAGCCCTGGCTTCCAGCTCTGGGCTTCAGCACAACAGACACCAGCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGGCAAGAGATTATCCTaGAGCATGGACACGCCAACC +
Preference number: 3 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSGKRLS*SMDTPT
Trigger: GGTTGGCGTGTCCATGCTCAAGGATAATCTCTTGCC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTGGTTTAAGCCAAAGTaGGTCGGGGGAGGAGGGATT +
Preference number: 3 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSWFKPK*VGGGGI
Trigger: AATCCCTCCTCCCCCGACCAACTTTGGCTTAAACCA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GGTGGCCTGGGCCCTAGTCCCATATGGGGATGCACATaGGACCTTCTTGGCCCCATAGACCTGCTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GGLGPSPIWGCT*DLLGPIDLLSP
Trigger: TGGAGACAGCAGGTCTATGGGGCCAAGAAGGTCTCATGTGCATCCCCATATGGGACTAGGGCCCAGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ATGAGCGGATCATACCACAATGAGCAGGGTACCACCTaGGGGCCATGGTGGCCAGTTGGGCTCTGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: MSGSYHNEQGTT*GPWWPVGLWPC
Trigger: GCAAGGCCAGAGCCCAACTGGCCACCATGGCCCTCAGGTGGTACCCTGCTCATTGTGGTATGATCCGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp CCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCTTATaGTTGCTGTCTCTCGGCTGGACAAGGTGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: PRILGGNRGPSL*LLSLGWTRWLG
Trigger: ACCCAACCACCTTGTCCAGCCGAGAGACAGCAATCATAAGGAGGGACCTCGGTTTCCCCCGAGGATCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CAATGGTGGCCTCCAAGAGGCAGCAAGACACTCTCATaGCCTGTTCCGAGCTCTCCCACTGTCTCCCCTGTG +
Preference number: 3 (lower is better)
Translates to: QWWPPRGSKTLS*PVPSSPTVSPV
Trigger: CACAGGGGAGACAGTGGGAGAGCTCGGAACAGGGCATGAGAGTGTCTTGCTGCCTCTTGGAGGCCACCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GAGGTGGCAGGCCGTGGTGGCAGGTCACTCTCACACTaGAAGGATGATGCCTTCGAGTTCCACACAAGGAGC +
Preference number: 3 (lower is better)
Translates to: EVAGRGGRSLSH*KDDAFEFHTRS
Trigger: GCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGACCTGCCACCACGGCCTGCCACCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GGATCCTCGGGGGAAACCGAGGTCCCTCCTTATGATTaGTGTCTCTCGGCTGGACAAGGTGGTTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GSSGETEVPPYD*CLSAGQGGWVG
Trigger: CCCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAATCATAAGGAGGGACCTCGGTTTCCCCCGAGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GGGACTGTAGGACTTTGTCCCTCATCTCCACAGAGGTaGTGGGGATGGGCTGGCCTGGTGTTCCTGGTTGCT +
Preference number: 3 (lower is better)
Translates to: GTVGLCPSSPQR*WGWAGLVFLVA
Trigger: AGCAACCAGGAACACCAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGAGGGACAAAGTCCTACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTaGCCATGGATCAGTTTCTTCCCCATTCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: ASWALALLPLTV*PWISFFPILGL
Trigger: GAGGCCCAGAATGGGGAAGAAACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AAAGCCGCAGACCCCGGACAGCATCCGAATGGCCAGTaGGAAGGCAGGGCCAGTGAGCACCTGGGTTTTATT +
Preference number: 3 (lower is better)
Translates to: KAADPGQHPNGQ*EGRASEHLGFI
Trigger: AATAAAACCCAGGTGCTCACTGGCCCTGCCTTCCCACTGGCCATTCGGATGCTGTCCGGGGTCTGCGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCCCTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATaGTTCATAGTCACAATGGTGGCCTCCAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ALASLTHFLCPV*FIVTMVASKRQ
Trigger: CTGCCTCTTGGAGGCCACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp ACTGAGGCCCAGGGAACATTCCATAGAGTGGAGCACTaGGCTCGGAGCCAGTCATGCCTGGGTACAAGTCCC +
Preference number: 3 (lower is better)
Translates to: TEAQGTFHRVEH*ARSQSCLGTSP
Trigger: GGGACTTGTACCCAGGCATGACTGGCTCCGAGCCCAGTGCTCCACTCTATGGAATGTTCCCTGGGCCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp TGTCCGTGCTTTTCCAGTGGGAAGGTAGACAGACAGTaGGTACCTGCTCCCGTCCCCTGGGACCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: CPCFSSGKVDRQ*VPAPVPWDLIL
Trigger: CAGGATGAGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCTGTCTACCTTCCCACTGGAAAAGCACGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCTTGCTTTCTAGGGTaGACTGCAGACCAAGTCAAC +
Preference number: 3 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASCFLG*TADQVN
Trigger: GTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCCTCATTGCCCCATGTaGTGGGTTTGGACCCACTTC +
Preference number: 3 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGPHCPM*WVWTHF
Trigger: GAAGTGGGTCCAAACCCACAACATGGGGCAATGAGG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGCTTTGGGGTCCTCATaGCCCCATGTTGTGGGTTTG +
Preference number: 3 (lower is better)
Translates to: ASVSERKPRILGGNRGPSALGSS*PHVVGL
Trigger: CAAACCCACAACATGGGGCAATGAGGACCCCAAAGC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGATAAAGGAAGGACAGTaGCAAAGCCTTGGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWIKEGQ*QSLGSD
Trigger: GTCAGAGCCAAGGCTTTGCAACTGTCCTTCCTTTAT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCACTGGACATCTGGGCTaGGCTGCCTGGGCTCACTCA +
Preference number: 3 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCTGHLG*AAWAHS
Trigger: TGAGTGAGCCCAGGCAGCCAAGCCCAGATGTCCAGT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCAGTTGGGCTCTGGCCTaGCTGCCTCTCACTGTGTGG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSWALA*LPLTVW
Trigger: CCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTGGCCATGGTGGCCAGTaGGGCTCTGGCCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRGHGGQ*GSGLAA
Trigger: GGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGCC...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATGGGTCAGGTCATCCTaGACCCATTTCCTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSWVRSS*THFLWK
Trigger: CTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCTGCCTGTCATTCTCCTaGGCCCCCAGGGTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSCLSFS*APRVQR
Trigger: CCTCTGCACCCTGGGGGCCAAGGAGAATGACAGGCA...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGCTCGTATTGTTTCACTaGCCTTTGGTCAGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWLVLFH*PLVSES
Trigger: GCTTTCACTGACCAAAGGCAAGTGAAACAATACGAG...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAGTTGTTCCCTCGTATaGTTTCACTTGCCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWSCSLV*FHLPLV
Trigger: GACCAAAGGCAAGTGAAACAATACGAGGGAACAACT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ACATCTGGGCTTGGCTGCCTGGGCTCACTCAGCTCCTaGTTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGG +
Preference number: 3 (lower is better)
Translates to: TSGLGCLGSLSS*FSSKVVACRER
Trigger: CCGTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGCAGCCAAGCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GGGAACTCCAGCCAGCTGCCTGAAGCAAACGGGGCCTaGGAGATGGAATTGGGTCAGGTCATCCTTGACCCA +
Preference number: 3 (lower is better)
Translates to: GNSSQLPEANGA*EMELGQVILDP
Trigger: TGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp TCCCAAATTTACCACTCCCCGCCTAGCTGGCTGCTCTaGGGCAGGCTGCTGACCCTCTCCACACTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: SQIYHSPPSWLL*GRLLTLSTLWF
Trigger: AAACCAGAGTGTGGAGAGGGTCAGCAGCCTGCCTCAGAGCAGCCAGCTAGGCGGGGAGTGGTAAATTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CAGAAGCCGCTGAGAGCTGGGGTTAGGGCTCCGGCATaGAATGCCTCCACACAGCTGTGCTTTCTTAGTTCG +
Preference number: 3 (lower is better)
Translates to: QKPLRAGVRAPA*NASTQLCFLSS
Trigger: CGAACTAAGAAAGCACAGCTGTGTGGAGGCATTGCATGCCGGAGCCCTAACCCCAGCTCTCAGCGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp AGAGGAAACACATCTTTCCTGGGCACTGCCAGTGGGTaGTGCCCACCGAGTGTGCCTCACCATTCTGCATGG +
Preference number: 3 (lower is better)
Translates to: RGNTSFLGTASG*CPPSVPHHSAW
Trigger: CCATGCAGAATGGTGAGGCACACTCGGTGGGCAGCACCCACTGGCAGTGCCCAGGAAAGATGTGTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp TCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTaGAGTTCCTCAAAGCTTCTGCAAAGCCTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: SPSALSSQTTIK*SSSKLLQSLPA
Trigger: AGCTGGGAGGCTTTGCAGAAGCTTTGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GTGCCCATGAGAGAGGGAATTAGGGCAGGATCCCGCTaGGCTATGGACACAGAGGCTTCCTGGCAATCACTG +
Preference number: 3 (lower is better)
Translates to: VPMREGIRAGSR*AMDTEASWQSL
Trigger: CAGTGATTGCCAGGAAGCCTCTGTGTCCATAGCCCAGCGGGATCCTGCCCTAATTCCCTCTCTCATGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp AGGCCGTGGTGGCAGGTCACTCTCACACTGCAAGGATaGTGCCTTCGAGTTCCACACAAGGAGCATACAGCC +
Preference number: 3 (lower is better)
Translates to: RPWWQVTLTLQG*CLRVPHKEHTA
Trigger: GGCTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGACCTGCCACCACGGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CATTGGATTAAGATGCAAAGAGGCACAGGGCACTTCTaGCCACCAACCAGGGGAGAGAAAGCCGCAGACCCC +
Preference number: 3 (lower is better)
Translates to: HWIKMQRGTGHF*PPTRGEKAADP
Trigger: GGGGTCTGCGGCTTTCTCTCCCCTGGTTGGTGGGCAGAAGTGCCCTGTGCCTCTTTGCATCTTAATCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CTAGTGCTGAGCAGTATCAAGCTGTCATCCAGTGGGTaGAGAGACCGACCCCCACTCCTGGAACTAACTCCC +
Preference number: 3 (lower is better)
Translates to: LVLSSIKLSSSG*RDRPPLLELTP
Trigger: GGGAGTTAGTTCCAGGAGTGGGGGTCGGTCTCTGCACCCACTGGATGACAGCTTGATACTGCTCAGCACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTaGTCGCCTGCAGAGAACGGCCCTATGGCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: AWAHSAPDFPVR*SPAENGPMAWF
Trigger: AAACCAAGCCATAGGGCCGTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CAGCCTGGGCTTTGGGGTCCTCATTGCCCCATGTTGTaGGTTTGGACCCACTTCAGCATGAGCAAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: QPGLWGPHCPML*VWTHFSMSKGL
Trigger: AAGACCCTTGCTCATGCTGAAGTGGGTCCAAACCCACAACATGGGGCAATGAGGACCCCAAAGCCCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CCAGCCAGCTGCCTGAAGCAAACGGGGCCTGAGAGATaGAATTGGGTCAGGTCATCCTTGACCCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: PASCLKQTGPER*NWVRSSLTHFL
Trigger: GAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATTGGCGCTCTTCCACGTaGCAGCTCAGAGGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHWRSST*QLRGLS
Trigger: TGAAAGGCCTCTGAGCTGCAACGTGGAAGAGCGCCA...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CTGCCTCCTTGTTTCTCCCATGAGAGGAATTGGAACTaGTCAGCAGGCAGAGACCGCGCAAAGCCAACTCTG +
Preference number: 3 (lower is better)
Translates to: LPPCFSHERNWN*SAGRDRAKPTL
Trigger: CAGAGTTGGCTTTGCGCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CTGTCTAGTGCTGAGCAGTATCAAGCTGTCATCCAGTaGGTGCAGAGACCGACCCCCACTCCTGGAACTAAC +
Preference number: 3 (lower is better)
Translates to: LSSAEQYQAVIQ*VQRPTPTPGTN
Trigger: GTTAGTTCCAGGAGTGGGGGTCGGTCTCTGCACCCACTGGATGACAGCTTGATACTGCTCAGCACTAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GGGAGGGGCTGTTCCTGCACAAAAACTCTGGCAAGCTaGGCAGATCTATTTGTCGGTTCCCAAGCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: GRGCSCTKTLAS*ADLFVGSQALQ
Trigger: CTGCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTTTGTGCAGGAACAGCCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AAGCGACTGCCTCCTTGTTTCTCCCATGAGAGGAATTaGAACTGCTCAGCAGGCAGAGACCGCGCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: KRLPPCFSHERN*NCSAGRDRAKP
Trigger: TGGCTTTGCGCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp ACTAAGAAGAAACTCCGGGGTCCTGGTGTTCCTCCCTaGATGGCGGGGAAGGCTCCATTAGCTTTGGACTTG +
Preference number: 3 (lower is better)
Translates to: TKKKLRGPGVPP*MAGKAPLALDL
Trigger: CAAGTCCAAAGCTAATGGAGCCTTCCCCGCCATCCAGGGAGGAACACCAGGACCCCGGAGTTTCTTCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp TTTCTGGGAAGCGGAAGGAGAGCCCTTGAGACAGGCTaGACTCCAAAGCAGATTCTCTCACCTCTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: FLGSGRRALETG*TPKQILSPLSW
Trigger: CCAGGACAGAGGTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GTCGGTTCCCAAGCCTTGCAGGAAGAATGTCTACAATaGCTTTGGGTAGACCTGAAGGACTCAGGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: VGSQALQEECLQ*LWVDLKDSGSP
Trigger: AGGGGACCCTGAGTCCTTCAGGTCTACCCAAAGGCATTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AGCTGCCTGAAGCAAACGGGGCCTGAGAGATGGAATTaGGTCAGGTCATCCTTGACCCATTTCCTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SCLKQTGPERWN*VRSSLTHFLWK
Trigger: CTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTCAGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CAGAGGTTGGACTCAAGGCGATCGCAGCACTCAATCTaGTGTGATCATCAGCGTCATCTGGGAGCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: QRLDSRRSQHSI*CDHQRHLGAAS
Trigger: TGAAGCTGCTCCCAGATGACGCTGATGATCACACCAGATTGAGTGCTGCGATCGCCTTGAGTCCAACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTGAGAGTTCTGCCTGCTaGCCCAGGGAACTCCATTCC +
Preference number: 3 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRESSAC*PRELHS
Trigger: GGAATGGAGTTCCCTGGGCAAGCAGGCAGAACTCTC...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GCTTCCCTTCTCACCTGCAGCTCGAGCTCTCGACGATaGAAACTCAGTCCAGGAGCAACAGAGGAAACACAT +
Preference number: 3 (lower is better)
Translates to: ASLLTCSSSSRR*KLSPGATEETH
Trigger: ATGTGTTTCCTCTGTTGCTCCTGGACTGAGTTTTCATCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp TCCAGAGTCTTTTCTGGGAAGCGGAAGGAGAGCCCTTaGGACAGGCTGAACTCCAAAGCAGATTCTCTCACC +
Preference number: 3 (lower is better)
Translates to: SRVFSGKRKESP*DRLNSKADSLT
Trigger: GGTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp AAAGGCAAAGGGTCAGTGTGTGTGAGACAGCAATGGTaGTGGGTATCAGGCCCTCTTAGGTCCTCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: KGKGSVCVRQQW*WVSGPLRSSVS
Trigger: GGAAACTGAGGACCTAAGAGGGCCTGATACCCAGCACCATTGCTGTCTCACACACACTGACCCTTTGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GTGCTTCTGCATGGAGATGTGTGTAGTACTCACACATaGTATGCTCACATACGCGTGCATCCCTCCCACCCT +
Preference number: 3 (lower is better)
Translates to: VLLHGDVCSTHT*YAHIRVHPSHP
Trigger: AGGGTGGGAGGGATGCACGCGTATGTGAGCATAGCATGTGTGAGTACTACACACATCTCCATGCAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AGTTGTAGAGCACTTAGGAACCATCCCAGAGTTCCCTaGCAAGGAAGGGATGAGTTTCTGGCCTCGGGAACT +
Preference number: 3 (lower is better)
Translates to: SCRALRNHPRVP*QGRDEFLASGT
Trigger: AGTTCCCGAGGCCAGAAACTCATCCCTTCCTTGCCAGGGAACTCTGGGATGGTTCCTAAGTGCTCTACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCTGAAGCTCTTATCCTGTGCTGGGCATTGGGGGTGTaGAGTTCTGTCATTCATGACCGAGGACCTCATCAT +
Preference number: 3 (lower is better)
Translates to: AEALILCWALGV*SSVIHDRGPHH
Trigger: ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GGGCTTTGTTCACCCCGAATCTCCCAGCACAAAGCCTaGCACAGGCTGGAGAATGCTTGTTGCATTGGATTA +
Preference number: 3 (lower is better)
Translates to: GLCSPRISQHKA*HRLENACCIGL
Trigger: TAATCCAATGCAACAAGCATTCTCCAGCCTGTGCCAGGCTTTGTGCTGGGAGATTCGGGGTGAACAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CTTGAGCATGGACACGCCAACCCAGATGATCCCCAGTaGGGAAAAGTGGGCTTCTCAGTTTGGCATTTCCAA +
Preference number: 3 (lower is better)
Translates to: LEHGHANPDDPQ*GKVGFSVWHFQ
Trigger: TTGGAAATGCCAAACTGAGAAGCCCACTTTTCCCCACTGGGGATCATCTGGGTTGGCGTGTCCATGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CAAAGTTGGTCGGGGGAGGAGGGATTCTGTTACTCGTaGCTGAATCTAGGGATTTCTCTTCCAGATGCGAGC +
Preference number: 3 (lower is better)
Translates to: QSWSGEEGFCYS*LNLGISLPDAS
Trigger: GCTCGCATCTGGAAGAGAAATCCCTAGATTCAGCCACGAGTAACAGAATCCCTCCTCCCCCGACCAACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CCTTATGATTGCTGTCTCTCGGCTGGACAAGGTGGTTaGGTTGGGGATGATGTTACCATGACAACCGGAGAG +
Preference number: 3 (lower is better)
Translates to: PYDCCLSAGQGG*VGDDVTMTTGE
Trigger: CTCTCCGGTTGTCATGGTAACATCATCCCCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAATCATAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GAGAATGCCAGGGAGAGGCATAAAAACTCTGGACTTTaGGTAAAACGTCCTGAGCCCGATGTGGTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: ENARERHKNSGL*VKRPEPDVVSL
Trigger: CAGGGAGACCACATCGGGCTCAGGACGTTTTACCCAAAGTCCAGAGTTTTTATGCCTCTCCCTGGCATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CGCAGCACTCAATCTGGTGTGATCATCAGCGTCATCTaGGAGCAGCTTCAAAAACATTCTCAGCATCGCCCC +
Preference number: 3 (lower is better)
Translates to: RSTQSGVIISVI*EQLQKHSQHRP
Trigger: GGGGCGATGCTGAGAATGTTTTTGAAGCTGCTCCCAGATGACGCTGATGATCACACCAGATTGAGTGCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGAACGGCCCTATGGCTaGGTTTCCAGATATCTGGAG +
Preference number: 3 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLERPYG*VSRYLE
Trigger: CTCCAGATATCTGGAAACCAAGCCATAGGGCCGTTC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCATTCTTTGTCTCCCTaGTCGGTGTTCCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHSLSP*SVFPLS
Trigger: GGACAGAGGGAACACCGACAAGGGAGACAAAGAATG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGATGACTGCAATCCCGTaGGGCATCTTCAATGGCACA +
Preference number: 3 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLMTAIP*GIFNGT
Trigger: TGTGCCATTGAAGATGCCCAACGGGATTGCAGTCAT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGTACCACAAAATCCCATaGGAGGGAGCCATTGCTAGG +
Preference number: 3 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLYHKIP*EGAIAR
Trigger: CCTAGCAATGGCTCCCTCCAATGGGATTTTGTGGTA...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCAAAGGAGATTGCACTaGTGCTTGGAAGCACCAGTA +
Preference number: 3 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLQRRLH*CLEAPV
Trigger: TACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATAAACGAGCACATTCTTaGTCTCCCTTGTCGGTGTTC +
Preference number: 3 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHKRAHS*SPLSVF
Trigger: GAACACCGACAAGGGAGACAAAGAATGTGCTCGTTT...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GACAGTTGCAAAGCCTTGGCTCTGACATCCATAACCTaGGGAGACGATGCCAGCAACCGCCTATATCTAGAC +
Preference number: 3 (lower is better)
Translates to: DSCKALALTSIT*GDDASNRLYLD
Trigger: GTCTAGATATAGGCGGTTGCTGGCATCGTCTCCTCAGGTTATGGATGTCAGAGCCAAGGCTTTGCAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GTTGGACTCAAGGCGATCGCAGCACTCAATCTGGTGTaGTCATCAGCGTCATCTGGGAGCAGCTTCAAAAAC +
Preference number: 3 (lower is better)
Translates to: VGLKAIAALNLV*SSASSGSSFKN
Trigger: GTTTTTGAAGCTGCTCCCAGATGACGCTGATGATCACACCAGATTGAGTGCTGCGATCGCCTTGAGTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GTAAGGTGGTCGCCTGCAGAGAACGGCCCTATGGCTTaGTTTCCAGATATCTGGAGAAAAGTGTGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: VRWSPAENGPMA*FPDIWRKVCFL
Trigger: GAGAAAGCACACTTTTCTCCAGATATCTGGAAACCAAGCCATAGGGCCGTTCTCTGCAGGCGACCACCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp TGGAATTGGGTCAGGTCATCCTTGACCCATTTCCTCTaGAAGGGAGTCGGGTGTCAGGAAACACATTTGCCT +
Preference number: 3 (lower is better)
Translates to: WNWVRSSLTHFL*KGVGCQETHLP
Trigger: AGGCAAATGTGTTTCCTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AAGGGCAATGACTGCAATCCCGTTGGGCATCTTCAATaGCACAAACCCTTTTCTTCGTCTGCAAGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: KGNDCNPVGHLQ*HKPFSSSASSL
Trigger: CAGGGAGCTTGCAGACGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp AAAAACACTCTGATTACAGAATCCAAAGGAAGCCGCTaGCATCATAGGGTGACAGCCACAGGCACAGCCTCC +
Preference number: 3 (lower is better)
Translates to: KNTLITESKGSR*HHRVTATGTAS
Trigger: GGAGGCTGTGCCTGTGGCTGTCACCCTATGATGCCAGCGGCTTCCTTTGGATTCTGTAATCAGAGTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTaGTTTTCTCCTCCAATTGTAGCAGAGACAGCGAAG +
Preference number: 3 (lower is better)
Translates to: AYSQGMEGQDKL*FSPPIVAETAK
Trigger: CTTCGCTGTCTCTGCTACAATTGGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CTTCGAGTTCCACACAAGGAGCATACAGCCAAGGCATaGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: LRVPHKEHTAKA*RVRTNSGFLLQ
Trigger: TTGGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCTTGTGTGGAACTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCATTGGAGGGAGCCATaGCTAGGAATTTTCCCAACT +
Preference number: 3 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHWREP*LGIFPT
Trigger: AGTTGGGAAAATTCCTAGCAATGGCTCCCTCCAATG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCGAAAGTGACATGTTATaGTTCTTGCTTTCTAGGGTT +
Preference number: 3 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLESDML*FLLSRV
Trigger: AACCCTAGAAAGCAAGAACAATAACATGTCACTTTC...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCAGGCTGGAGAATGCTaGTTGCATTGGATTAAGATG +
Preference number: 3 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSQAGEC*LHWIKM
Trigger: CATCTTAATCCAATGCAACAAGCATTCTCCAGCCTG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GCATCGTGTCTAAACCAGCCCAAGGAAATTCCCAGATaGCACAGATCTAAGGGGTCATCTGACCTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ASCLNQPKEIPR*HRSKGSSDLPF
Trigger: GAAGGGAAGGTCAGATGACCCCTTAGATCTGTGTCATCTGGGAATTTCCTTGGGCTGGTTTAGACACGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp GGGGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTaGAATTGGAGGGAAAACGTAATCGTTCCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: GGFGMRALVFRT*NWRENVIVPPK
Trigger: CTTTGGAGGAACGATTACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGGGGAGTGGGAAAGGTaGGTGATCAACTATTTTGAT +
Preference number: 3 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRGEWER*VINYFD
Trigger: ATCAAAATAGTTGATCACCAACCTTTCCCACTCCCC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ATGGCGGGGAAGGCTCCATTAGCTTTGGACTTGATATaGACCGAGATAACACACACATGTTCCGAGACAGTC +
Preference number: 3 (lower is better)
Translates to: MAGKAPLALDLI*TEITHTCSETV
Trigger: GACTGTCTCGGAACATGTGTGTGTTATCTCGGTTCATATCAAGTCCAAAGCTAATGGAGCCTTCCCCGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp TTACTCGTGGCTGAATCTAGGGATTTCTCTTCCAGATaGGAGCCCACGCGCACAATCCTAGGATACCTAATA +
Preference number: 3 (lower is better)
Translates to: LLVAESRDFSSR*EPTRTILGYLI
Trigger: TATTAGGTATCCTAGGATTGTGCGCGTGGGCTCGCATCTGGAAGAGAAATCCCTAGATTCAGCCACGAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp TGGTTTTCTCCTCCAATTGTAGCAGAGACAGCGAAGTaGCACTCCAAGCCACCCTACCCTTCATTCTTACTA +
Preference number: 3 (lower is better)
Translates to: WFSPPIVAETAK*HSKPPYPSFLL
Trigger: TAGTAAGAATGAAGGGTAGGGTGGCTTGGAGTGGCACTTCGCTGTCTCTGCTACAATTGGAGGAGAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp CTCCCCAGTAAAACTTCTGGAACATGCACAAGCGACTaGCTCCTTGTTTCTCCCATGAGAGGAATTGGAACT +
Preference number: 3 (lower is better)
Translates to: LPSKTSGTCTSD*LLVSPMRGIGT
Trigger: AGTTCCAATTCCTCTCATGGGAGAAACAAGGAGGCAGTCGCTTGTGCATGTTCCAGAAGTTTTACTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp ATTCAACAAACCACAGCTGAAGCTCTTATCCTGTGCTaGGCATTGGGGGTGTGGAGTTCTGTCATTCATGAC +
Preference number: 3 (lower is better)
Translates to: IQQTTAEALILC*ALGVWSSVIHD
Trigger: GTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTGTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGATATCACTCTGTCACTaGTCACTGCTATCATTGAAC +
Preference number: 3 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLISLCH*SLLSLN
Trigger: GTTCAATGATAGCAGTGACAAGTGACAGAGTGATAT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCAAGCAGGAGAATCGCTaGAATCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAKQENR*NLGGGG
Trigger: ACCTCCGCCTCCCAGATTCAAGCGATTCTCCTGCTT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ATTGCCCCATGTTGTGGGTTTGGACCCACTTCAGCATaGGCAAGGGTCTTTATATCTTTAAGCCTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: IAPCCGFGPTSA*ARVFISLSLRV
Trigger: AACCCTGAGGCTTAAAGATATAAAGACCCTTGCTCATGCTGAAGTGGGTCCAAACCCACAACATGGGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GTAATTCAACAAACCACAGCTGAAGCTCTTATCCTGTaGTGGGCATTGGGGGTGTGGAGTTCTGTCATTCAT +
Preference number: 3 (lower is better)
Translates to: VIQQTTAEALIL*WALGVWSSVIH
Trigger: ATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTGTTGAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTaGCTCACGGCAGCTGTTGCTTTGCTGGTTACTGCT +
Preference number: 3 (lower is better)
Translates to: VKGQISTKGLNF*LTAAVALLVTA
Trigger: AGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTAGCTACTCTTTGTGGTaGTTAAAACTAGACAAGCAT +
Preference number: 3 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSYSLW*LKLDKH
Trigger: ATGCTTGTCTAGTTTTAACAACCACAAAGAGTAGCT...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp CCTCGATATCACTCTGTCACTTGTCACTGCTATCATTaGACCTGCCTCTGGTCATTGCCATTTCTACTTCTG +
Preference number: 3 (lower is better)
Translates to: PRYHSVTCHCYH*TCLWSLPFLLL
Trigger: CAGAAGTAGAAATGGCAATGACCAGAGGCAGGTTCAATGATAGCAGTGACAAGTGACAGAGTGATATCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp CTACTTAAAGGGCCTTTCTGGGTCTATAATACCTTATaGTTCCAAAGCCGGACAGAAGGTCCGAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: LLKGPFWVYNTL*FQSRTEGPRKS
Trigger: GGATTTCCTCGGACCTTCTGTCCGGCTTTGGAATCATAAGGTATTATAGACCCAGAAAGGCCCTTTAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp GTTGCAGCTCAGAGGCCTTTCATTACATCTGAATTCTaGGATTCGCTTTGGAGAAGAGGTTGCCATGAAAGT +
Preference number: 3 (lower is better)
Translates to: VAAQRPFITSEF*DSLWRRGCHES
Trigger: ACTTTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAATGAAAGGCCTCTGAGCTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTGGCTCACGGCAGCTGTaGCTTTGCTGGTTACTGCTA +
Preference number: 3 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVGSRQL*LCWLLL
Trigger: TAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCC...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR TCA 72 bp ATTAAGCCCTCTTTCAAAGCAGGTTATCTGCTATCCTaGGAAAAAGAGGGCATCGTGTCTAAACCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: IKPSFKAGYLLS*EKEGIVSKPAQ
Trigger: TTGGGCTGGTTTAGACACGATGCCCTCTTTTTCTCAGGATAGCAGATAACCTGCTTTGAAAGAGGGCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp TGTAAAATGGGTACAAAGTTGGAACAAGACAGTCTATaGAAGCCCTCCAACTCTGACAGCCTGAAGAATCCA +
Preference number: 3 (lower is better)
Translates to: CKMGTKLEQDSL*KPSNSDSLKNP
Trigger: TGGATTCTTCAGGCTGTCAGAGTTGGAGGGCTTCCATAGACTGTCTTGTTCCAACTTTGTACCCATTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ATGAAAAATTGGAGGTACAGCAAGCATCCTGGGCCATaGAGTGACTGTGATATAAAGGAAGGACAGTTGCAA +
Preference number: 3 (lower is better)
Translates to: MKNWRYSKHPGP*SDCDIKEGQLQ
Trigger: TTGCAACTGTCCTTCCTTTATATCACAGTCACTTCATGGCCCAGGATGCTTGCTGTACCTCCAATTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR TCA 72 bp ATGCAGCATCTACATGCACATATACACACACAAGTGTaGACGCATACACAAACACACACACACAGACACACA +
Preference number: 3 (lower is better)
Translates to: MQHLHAHIHTQV*THTQTHTHRHT
Trigger: TGTGTGTCTGTGTGTGTGTGTTTGTGTATGCGTTCACACTTGTGTGTGTATATGTGCATGTAGATGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp AGAAAAACTCAAGTTGTTCCCTCGTATTGTTTCACTTaGCTTTGGTCAGTGAAAGCTTTGCCACTAGCGCTT +
Preference number: 3 (lower is better)
Translates to: RKTQVVPSYCFT*LWSVKALPLAL
Trigger: AAGCGCTAGTGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp GAAGAGGTTGCCATGAAAGTGACATGTTATTGTTCTTaGTTTCTAGGGTTGACTGCAGACCAAGTCAACAAT +
Preference number: 3 (lower is better)
Translates to: EEVAMKVTCYCS*FLGLTADQVNN
Trigger: ATTGTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGTCGGTTCCCAAGCCTaGCAGGAAGAATGTCTACAA +
Preference number: 3 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVVGSQA*QEECLQ
Trigger: TTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGAC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CCA 72 bp CCATTTCTACTTCTGACACGTGGCAGCTACTCTTTGTaGTTGTTAAAACTAGACAAGCATACTTGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: PFLLLTRGSYSL*LLKLDKHTCSH
Trigger: ATGAGAACAAGTATGCTTGTCTAGTTTTAACAACCACAAAGAGTAGCTGCCACGTGTCAGAAGTAGAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR-3UTR CAA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTAGACAGTTTGTCATTTaGCTGAGCTCAAGACTCAGT +
Preference number: 3 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVRQFVI*LSSRLS
Trigger: ACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCT...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CCA 72 bp CTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTaGGTTTTAAAGAGAGAACTATTGTATCACGCGCAT +
Preference number: 3 (lower is better)
Translates to: LENTLNLCMSCA*VLKRELLYHAH
Trigger: ATGCGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR-3UTR CAA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGACATGTTATTGTTCTaGCTTTCTAGGGTTGACTGC +
Preference number: 3 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVDMLLF*LSRVDC
Trigger: GCAGTCAACCCTAGAAAGCAAGAACAATAACATGTC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR GCA 72 bp TCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTaGTTGGGTTTTAAAGAGAGAACTATTGTATCACGC +
Preference number: 3 (lower is better)
Translates to: SSREHSQFMYEL*LGFKERTIVSR
Trigger: GCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CCA 72 bp AAGGAGATTGCACTTGTGCTTGGAAGCACCAGTAACTaGGCTGTTACGTTATATTACAAGTATATTTATATG +
Preference number: 3 (lower is better)
Translates to: KEIALVLGSTSN*AVTLYYKYIYM
Trigger: CATATAAATATACTTGTAATATAACGTAACAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGCTCCCAGGCTCCCCTaGACCGGAGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALAPRLP*TGAGPA
Trigger: TGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGCTCCCAGGCTCCCCTaGACCGGAGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPAPRLP*TGAGPA
Trigger: TGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGCTTTCGCCGCAGGCTaGAGGCCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPAFAAG*RPSWAS
Trigger: GCTGGCCCAGGAGGGCCTGCAGCCTGCGGCGAAAGC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAPPPRH*AASRSS
Trigger: TGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCGGCAGGCTGGCAGTaGCCTCCAAGAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPAGWQ*PPRAAG
Trigger: CCCAGCGGCTCTTGGAGGTCACTGCCAGCCTGCCGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCGGCAGGCTGGCAGTaGCCTCCAAGAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPPAGWQ*PPRAAG
Trigger: CCCAGCGGCTCTTGGAGGTCACTGCCAGCCTGCCGG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPPPRH*AASRSS
Trigger: TGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPGRWKC*HSSTAA
Trigger: CGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGGCCCGCCACGACTCTaGCAGCTCCCTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPGPPRL*QLPELL
Trigger: GAGGAGCTCAGGGAGCTGGCAGAGTCGTGGCGGGCC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGGCCCGCCACGACTCTaGCAGCTCCCTGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHGPPRL*QLPELL
Trigger: GAGGAGCTCAGGGAGCTGGCAGAGTCGTGGCGGGCC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCTCCCAGGCTCCCCTaGACCGGAGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAPRLP*TGAGPA
Trigger: TGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
3UTR CAA 72 bp TGGGCCTCTGCTGAAGCAGCCTGCAGGCACTGGCAATaGGGTGATGAGGGCCACCTGTGGGGTGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: WASAEAACRHWQ*GDEGHLWGAPT
Trigger: GGTGGGGGCACCCCACAGGTGGCCCTCATCACCCAATTGCCAGTGCCTGCAGGCTGCTTCAGCAGAGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCGGCAGGCTGGCAGTaGCCTCCAAGAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESPAGWQ*PPRAAG
Trigger: CCCAGCGGCTCTTGGAGGTCACTGCCAGCCTGCCGG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCGTCTGCAAGCTCCCTaGGGGCAGGGACTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVARLQAP*GQGLGF
Trigger: AAAGCCCAGTCCCTGCCCTCAGGGAGCTTGCAGACG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGACTCTGGGCCTCTGCTaGAGCAGCCTGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWTLGLC*SSLQAL
Trigger: CAGTGCCTGCAGGCTGCTTCAGCAGAGGCCCAGAGT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCTTTCGCCGCAGGCTaGAGGCCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAFAAG*RPSWAS
Trigger: GCTGGCCCAGGAGGGCCTGCAGCCTGCGGCGAAAGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGCTTTCGCCGCAGGCTaGAGGCCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGAFAAG*RPSWAS
Trigger: GCTGGCCCAGGAGGGCCTGCAGCCTGCGGCGAAAGC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCAGCGCCGCCCGTGTTaGCGAGTAGCGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPQRRPC*RVASPV
Trigger: CACTGGAGACGCTACTCGGCAACACGGGCGGCGCTG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCAGCGCCGCCCGTGTTaGCGAGTAGCGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSQRRPC*RVASPV
Trigger: CACTGGAGACGCTACTCGGCAACACGGGCGGCGCTG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCTTCAGCTGGGCTTaGAGCCGGTCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSFSWA*SRSTRG
Trigger: GCCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPPPRH*AASRSS
Trigger: TGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKGRWKC*HSSTAA
Trigger: CGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCACCTGCTCCAGGAGTaGCGTGGCTCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALHLLQE*RGSLLA
Trigger: GGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGATCACCAGCCAGCCCTaGGCTTCCACCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWITSQP*ASTRDS
Trigger: GCTGTCCCTGGTGGAAGCGCAGGGCTGGCTGGTGAT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTGGACCCCCGGTCCCTaGAGGGAACTCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHWTPGP*RELQPA
Trigger: AGCTGGCTGGAGTTCCCTGCAGGGACCGGGGGTCCA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCTTGGCCCCCAGGGTaGAGAGGGTCCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPPWPPG*RGSPAS
Trigger: GGAAGCTGGGGACCCTCTGCACCCTGGGGGCCAAGG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCACTCTGTCCTCTGCCTaGCCCCGCAAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPTLSSA*PRKGWP
Trigger: AGGCCAGCCCTTGCGGGGGCAGGCAGAGGACAGAGT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGGTGGCAGGCCGTGGTaGCAGGTCACTCTCACACTG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWGGRPW*QVTLTL
Trigger: CAGTGTGAGAGTGACCTGCCACCACGGCCTGCCACC...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTaGGGTGGCCTGGGCCCTAGTCCCATATGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PARLHLAGEGLV*GGLGPSPIWGC
Trigger: GCATCCCCATATGGGACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCGTCCTGGGGCTGCTaGGTCATGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSSWGC*VMAPAG
Trigger: CCCTGCAGGTGCCATGACTCAGCAGCCCCAGGACGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGGAGAGGCGCTGCGTaGTGGGCAGCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALWRGAA*WAACSS
Trigger: GGAACTGCAAGCTGCCCATCACGCAGCGCCTCTCCA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPGRSR*SPFSAW
Trigger: CCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPPGRSR*SPFSAW
Trigger: CCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCTCCAGCCAGCTGCCTaGAGCAAACGGGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPLQPAA*SKRGLR
Trigger: TCTCAGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCCGCGCGGGGTCCCTaGGTGTTGTCATTGACCTGC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAARGP*VLSLTC
Trigger: GCAGGTCAATGACAACACGCAGGGACCCCGCGCGGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGTTGAACAGGGAGGCTaGCTCCTCCAGCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALVEQGG*LLQQPV
Trigger: GACCGGCTGCTGGAGGAGGCAGCCTCCCTGTTCAAC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTCCCGGGCCACCTaGTCCAGCAGATCTACACGC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPCSRAT*SSRSTR
Trigger: GCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCAGCGCCGCCCGTGTTaGCGAGTAGCGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPQRRPC*RVASPV
Trigger: CACTGGAGACGCTACTCGGCAACACGGGCGGCGCTG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCCTTCAGCTGGGCTTaGAGCCGGTCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSFSWA*SRSTRG
Trigger: GCCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALRGRWK*CHSSTA
Trigger: GGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRGRWK*CHSSTA
Trigger: GGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCACCTGCTCCAGGAGTaGCGTGGCTCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKHLLQE*RGSLLA
Trigger: GGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCGCCTCTCCCCGGTGTaGCTCCAGCTTTTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALRLSPV*LQLLRG
Trigger: ACCACGCAAAAGCTGGAGGCACACCGGGGAGAGGCG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGATCCGAGGTCCCCCTTaGTGGCCCGAGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALIRGPP*WPETKE
Trigger: CTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGAT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCACCCCAGCCCAGGTGGTaGATGGAGCCCAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSPQPRW*MEPSSP
Trigger: AGGCGAGCTGGGCTCCATGCACCACCTGGGCTGGGG...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGTCTGCTGTCAGTACCTaGCCATCCCTCCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWSAVST*PSLPLP
Trigger: TGGGAGCGGGAGGGATGGGCAGGTACTGACAGCAGA...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGGATCCCGGGCTTCTaGTCCCCAGGGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPRIPGF*SPGQHA
Trigger: GGCATGCTGCCCTGGGGACCAGAAGCCCGGGATCCT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCTTCAGGCCCAGCTaGAGCTCGATGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSFRPS*SSMWGS
Trigger: GGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGCAGCACCTGGGCGTaGCTCAGCTGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSSTWA*LSCHCF
Trigger: GAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCCAGGAGCACCGCCTaGTTGTCCACGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASRSTA*LSTLCS
Trigger: GCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCGCAGCTCCAGCAGCTaGTGGCTGAAGGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRSSSS*WLKVQC
Trigger: GCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCGAGGTCCCCCTTGCTaGCCCGAGACGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRGPPC*PETKEV
Trigger: AACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCAGCTCGCCTACACCTaGCTGGAGAGGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAQLAYT*LERAWF
Trigger: AAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCCCAAGGGCTCTCCTTaGCAGCACGGGTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHPKGSP*QHGFPA
Trigger: GGCAGGAAACCCGTGCTGCCAAGGAGAGCCCTTGGG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGTGGGCCTGCCCCCTCTaGAAAGGCAGATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWWACPL*KGRWAK
Trigger: CTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCA...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCAGGGCAGGATCCCGCTaGGCTATGGACACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVARAGSR*AMDTEA
Trigger: AGCCTCTGTGTCCATAGCCCAGCGGGATCCTGCCCT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCTGCTCCCGTCCCCTaGGACCTCATCCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPAPVP*DLILVL
Trigger: CAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTGCCCCCGCAAGGGCTaGCCTGTCCGTGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHCPRKG*PVRAFP
Trigger: TGGAAAAGCACGGACAGGCCAGCCCTTGCGGGGGCA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGCTGAAGCCCAGAGCTaGAAGCCAGGGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSAEAQS*KPGLPS
Trigger: ACTGGGCAGCCCTGGCTTCCAGCTCTGGGCTTCAGC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCTGGTGTTCCTCCCTaGATGGCGGGGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPGVPP*MAGKAP
Trigger: TGGAGCCTTCCCCGCCATCCAGGGAGGAACACCAGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GTACCTGCTCCCGTCCCCTGGGACCTCATCCTGGTGTaGCCAGCTCCCTTCAGCGGTGGGAGTCAACGGACT +
Preference number: 4 (lower is better)
Translates to: VPAPVPWDLILV*PAPFSGGSQRT
Trigger: AGTCCGTTGACTCCCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCAGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCTCCCATTGGGCCTTaGTGTCCTTCAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPPIGP*CPSAGP
Trigger: TGGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCAGCCCCTGCAACCTTaGGAGCTGGGCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPQPLQP*ELGLFS
Trigger: GGAAAACAGGCCCAGCTCTCAAGGTTGCAGGGGCTG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCAGCCCCTGCAACCTTaGGAGCTGGGCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALQPLQP*ELGLFS
Trigger: GGAAAACAGGCCCAGCTCTCAAGGTTGCAGGGGCTG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCAGCAGCTGGTGGCTaGAGGTGCAGTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPAAGG*RCSAPA
Trigger: TGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGGACTCAGGGTCCCCTaGGAGGAGGTGGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVGLRVP*EEVAGR
Trigger: ACGGCCTGCCACCTCCTCTCAGGGGACCCTGAGTCC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCCGCGCGGGGTCCCTaGGTGTTGTCATTGACCTGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAARGP*VLSLTC
Trigger: GCAGGTCAATGACAACACGCAGGGACCCCGCGCGGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGTCCCCAGGGCAGCATaGCAAGAGGGCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPVPRAA*QEGFSH
Trigger: ATGGCTGAAGCCCTCTTGGCATGCTGCCCTGGGGAC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTGGTTGTCCACGTTGTaGAGCAGCACCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSWLSTL*SSTWAW
Trigger: CCACGCCCAGGTGCTGCTGCACAACGTGGACAACCA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCATGACACCCGCAGACTaGTCCTCCAGCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAMTPAD*SSSVSR
Trigger: TCTGGAGACGCTGGAGGAGCAGTCTGCGGGTGTCAT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCTCCAGAGACCTCTaGAGGGCCTGGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSSRDL*RAWKSE
Trigger: CTCCGACTTCCAGGCCCTGCAGAGGTCTCTGGAGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTGCTCCTGCACACTCTaGCGACACCTGTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVACSCTL*RHLSTR
Trigger: CCTTGTGGACAGGTGTCGGCAGAGTGTGCAGGAGCA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCGCCTCTCCCCGGTGTaGCTCCAGCTTTTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKRLSPV*LQLLRG
Trigger: ACCACGCAAAAGCTGGAGGCACACCGGGGAGAGGCG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATCACCAGCCAGCCCTaGGCTTCCACCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPITSQP*ASTRDS
Trigger: GCTGTCCCTGGTGGAAGCGCAGGGCTGGCTGGTGAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAGTTGTTGGCCAGGGTaGAGCTGCGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSCWPG*SCGPLP
Trigger: GGGAAGAGGACCGCAGCTGCACCCTGGCCAACAACT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGAACTCCAGCCAGCTaGCTGAAGCAAACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALGTPAS*LKQTGP
Trigger: AGGCCCCGTTTGCTTCAGGCAGCTGGCTGGAGTTCC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCATGCTCACATACGCGTaGATCCCTCCCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPMLTYA*IPPTLP
Trigger: GGGCAGGGTGGGAGGGATGCACGCGTATGTGAGCAT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCATGAGCTCCTTCAGCTaGGCTTGCAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPMSSFS*ACSRST
Trigger: GGTGGACCGGCTGCAAGCCCAGCTGAAGGAGCTCAT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGATGAGCTCCTTCAGCTaGGCTTGCAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALMSSFS*ACSRST
Trigger: GGTGGACCGGCTGCAAGCCCAGCTGAAGGAGCTCAT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGCCCCTTCTCGGCTTaGACCCTGACCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSPFSA*TLTWRS
Trigger: GGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGCCCCTTCTCGGCTTaGACCCTGACCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSPFSA*TLTWRS
Trigger: GGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGTTGGGGTTCTCCTaGACCAGAGGCCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPWLGFS*TRGLAA
Trigger: GGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAGCTCCAGCAGCTGGTaGCTGAAGGTGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSSSSW*LKVQCS
Trigger: GGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCGCAGCTCCAGCAGCTaGTGGCTGAAGGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPRSSSS*WLKVQC
Trigger: GCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCAAACTCGGCCTCTTaGGACTCGGCATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSNSAS*DSASPG
Trigger: CCCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCACCAGGGACAGCTaGGCCTCCTTCTCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSTRDS*ASFSGN
Trigger: ATTCCCGGAGAAGGAGGCCCAGCTGTCCCTGGTGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCACCAGGGACAGCTaGGCCTCCTTCTCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSTRDS*ASFSGN
Trigger: ATTCCCGGAGAAGGAGGCCCAGCTGTCCCTGGTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTCCACCAGGGACAGCTaGGCCTCCTTCTCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSTRDS*ASFSGN
Trigger: ATTCCCGGAGAAGGAGGCCCAGCTGTCCCTGGTGGA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGAGATGCTGACCTTCTaGCACCCGAGCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALEMLTF*HPSLQL
Trigger: GAGCTGGAGGCTCGGGTGCCAGAAGGTCAGCATCTC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCGAGGTCCCCCTTGCTaGCCCGAGACGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKRGPPC*PETKEV
Trigger: AACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGCGGGCGAAGTTGTTaGCCAGGGTGCAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSGRSC*PGCSCG
Trigger: ACCGCAGCTGCACCCTGGCCAACAACTTCGCCCGCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCCCAGTGGGTTAGGTaGGTGGTGGGCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPQWVR*VVGHCS
Trigger: GCTACAATGGCCCACCACCCACCTAACCCACTGGGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTACCTGTGTGCCCCAGTaGGTTAGGTGGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPTCVPQ*VRWVVG
Trigger: GCCCACCACCCACCTAACCCACTGGGGCACACAGGT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGGACCCTCGATCCCTaGCCCCTGGCGTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESWTLDP*PLAWQM
Trigger: CATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCCTCGGGAACTCACATaGAGTCACCGCGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSPRELT*SHRGPS
Trigger: GCTGGGGCCGCGGTGACTCCATGTGAGTTCCCGAGG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCTGCGTGTTGTCATTaGCCTGCAGCTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPACCH*PAAGPA
Trigger: TGCAGGACCAGCTGCAGGTCAATGACAACACGCAGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATGGAGAGGCGCTGCGTaGTGGGCAGCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSWRGAA*WAACSS
Trigger: GGAACTGCAAGCTGCCCATCACGCAGCGCCTCTCCA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLPGRSR*SPFSAW
Trigger: CCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCAGCCCCTGCAACCTTaGGAGCTGGGCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKQPLQP*ELGLFS
Trigger: GGAAAACAGGCCCAGCTCTCAAGGTTGCAGGGGCTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCAGCAGCTGGTGGCTaGAGGTGCAGTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESPAAGG*RCSAPA
Trigger: TGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCGGTCCTCTTCCCTaGTTGGGAGCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPCGPLP*LGAGTA
Trigger: TGCTGTTCCTGCTCCCAATCAGGGAAGAGGACCGCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGCGGTCCTCTTCCCTaGTTGGGAGCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALCGPLP*LGAGTA
Trigger: TGCTGTTCCTGCTCCCAATCAGGGAAGAGGACCGCA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGGAAGCAAACGGGGCCTaGGAGATGGAATTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWEANGA*EMELGQ
Trigger: CTGACCCAATTCCATCTCTCAGGCCCCGTTTGCTTC...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGCCACACCCACTCGATaGGGCTGTGACAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALATPTR*GCDSES
Trigger: TGACTCACTGTCACAGCCGCATCGAGTGGGTGTGGC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGGTACTCGCTCCAGTaGAGCCACACCCACTCGATG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALRYSLQ*SHTHSM
Trigger: CATCGAGTGGGTGTGGCTGCACTGGAGCGAGTACCT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGGCGTGGCTCAGCTaGCACTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKWAWLS*HCFSFR
Trigger: CCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGTTGTCCACGTTGTaGAGCAGCACCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKWLSTL*SSTWAW
Trigger: CCACGCCCAGGTGCTGCTGCACAACGTGGACAACCA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGCTCCCGGGCCACCTaGTCCAGCAGATCTACACGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESCSRAT*SSRSTR
Trigger: GCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCGAACTCGTCCACACCTaGCTGGTACTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAELVHT*LVLLML
Trigger: GAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTC...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCATGACACCCGCAGACTaGTCCTCCAGCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPMTPAD*SSSVSR
Trigger: TCTGGAGACGCTGGAGGAGCAGTCTGCGGGTGTCAT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSSCLI*CSQAPL
Trigger: CAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCTGGGCCAGCCTCTaGAGGACCATCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSWASL*RTILNS
Trigger: TGAGTTCAGGATGGTCCTGCAGAGGCTGGCCCAGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTAGCGTCTCCAGTGTaGCACCAGCTCGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPVASPV*HQLVLG
Trigger: ACCGAGGACGAGCTGGTGGCACACTGGAGACGCTAC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCACAGCTGCAGATCCTaGAGAGGCCGCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALHSCRS*RGRWKC
Trigger: GCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGCTTTCCATCAGGGCTaGCTCGATCTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALAFHQG*LDLGQE
Trigger: TTCCTGCCCCAGATCGAGGCAGCCCTGATGGAAAGC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCTCCAGAGACCTCTaGAGGGCCTGGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSSRDL*RAWKSE
Trigger: CTCCGACTTCCAGGCCCTGCAGAGGTCTCTGGAGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAAGGTGCAGTGCTCCTaGACACTCTGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPKVQCS*TLCRHL
Trigger: CAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGCTGAAGGTGCAGTaGTCCTGCACACTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPWLKVQ*SCTLCR
Trigger: TCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCACAACGATCCACTaGCGCAGCTCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPVTTIH*RSSSSW
Trigger: CCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGAC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGTCACAACGATCCACTaGCGCAGCTCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKVTTIH*RSSSSW
Trigger: CCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGAC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTATCACCAGCCAGCCCTaGGCTTCCACCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESITSQP*ASTRDS
Trigger: GCTGTCCCTGGTGGAAGCGCAGGGCTGGCTGGTGAT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTATCCGAGGTCCCCCTTaGTGGCCCGAGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESIRGPP*WPETKE
Trigger: CTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGAT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGCAGCAGAAGCAGCTaGAGTGGGAGCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSSRSS*SGSATQ
Trigger: CTGTGTGGCGCTCCCACTGCAGCTGCTTCTGCTGCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGTTGTTGGCCAGGGTaGAGCTGCGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSCWPG*SCGPLP
Trigger: GGGAAGAGGACCGCAGCTGCACCCTGGCCAACAACT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGCTCCGGCATGCAATaGCTCCACACAGCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALGSGMQ*LHTAVL
Trigger: AAGCACAGCTGTGTGGAGGCATTGCATGCCGGAGCC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGCAGCATGCTGCCCCTaGTTTGGAATGTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPAACCP*FGMLPS
Trigger: GGAGGGCAACATTCCAAAGCAGGGGCAGCATGCTGC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCGAGAGGAATTGGAACTaGTCAGCAGGCAGAGACCGC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAERNWN*SAGRDR
Trigger: GCGGTCTCTGCCTGCTGAGCAGTTCCAATTCCTCTC...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCCTCGGGCTCCAGCTaGCATATTTTCTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPSGSS*HIFSVS
Trigger: GGAGACCGAGAAAATATGCCAGCTGGAGCCCGAGGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCAGCTGGAGCTCGATGTaGGGCTCCAGTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSSWSSM*GSSVTI
Trigger: GATGGTCACACTGGAGCCCCACATCGAGCTCCAGCT...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTTGTGCAGCAGCACCTaGGCGTGGCTCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESLCSST*AWLSCH
Trigger: GTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCAGGAGCACCGCCTaGTTGTCCACGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSRSTA*LSTLCS
Trigger: GCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCGTCCACACCTGCCTaGTACTCCTCATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSSTPA*YSSCSR
Trigger: CCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCTGCAGAGGCCGCTaGAAATGCTGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSCRGR*KCCHSS
Trigger: GGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCTGCAGAGGCCGCTaGAAATGCTGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSCRGR*KCCHSS
Trigger: GGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCTCCAGGAGTGCCGTaGCTCTCTCCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAPGVP*LSPGQR
Trigger: TCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGCTTGGACCCTGACCTaGAGGTCCAAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALAWTLT*RSKSFL
Trigger: GAGGAAGCTCTTGGACCTCCAGGTCAGGGTCCAAGC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGGTTGGGGTTCTCCTaGACCAGAGGCCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPWLGFS*TRGLAA
Trigger: GGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGCTCCAGCAGCTGGTaGCTGAAGGTGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSSSSW*LKVQCS
Trigger: GGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCGCAGCTCCAGCAGCTaGTGGCTGAAGGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGRSSSS*WLKVQC
Trigger: GCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCAAACTCGGCCTCTTaGGACTCGGCATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSNSAS*DSASPG
Trigger: CCCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCACCGCCGAGTCTTTTaGAATCCAGTCGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALHRRVF*NPVGSP
Trigger: AGGGGAGCCGACTGGATTCCAAAAGACTCGGCGGTG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGGGTTAGGTGGGTGGTaGGCCATTGTAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPGLGGW*AIVAQH
Trigger: ATGCTGCGCTACAATGGCCCACCACCCACCTAACCC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGTGGGTTAGGTGGGTaGTGGGCCATTGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSGLGG*WAIVAQ
Trigger: CTGCGCTACAATGGCCCACCACCCACCTAACCCACT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACAGTGGGTTAGGTGGGTaGTGGGCCATTGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSGLGG*WAIVAQ
Trigger: CTGCGCTACAATGGCCCACCACCCACCTAACCCACT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTACCTGTGTGCCCCAGTaGGTTAGGTGGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESTCVPQ*VRWVVG
Trigger: GCCCACCACCCACCTAACCCACTGGGGCACACAGGT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCACCTGTGTGCCCCAGTaGGTTAGGTGGGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGTCVPQ*VRWVVG
Trigger: GCCCACCACCCACCTAACCCACTGGGGCACACAGGT...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCTCGATCCCTGGCCCCTaGCGTGGCAGATGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGSIPGP*RGRCFP
Trigger: AGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGA...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGCCCAGGTGGTGCATaGAGCCCAGCTCGCCTACAC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSPGGA*SPARLH
Trigger: GTGTAGGCGAGCTGGGCTCCATGCACCACCTGGGCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGCCATGGTGGCCAGTTaGGCTCTGGCCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSAMVAS*ALALLP
Trigger: AGGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCAACCGACCCACTGGTaGTCCTTTCTCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSQPTHW*SFLPPL
Trigger: GAGAGGAGGGAGAAAGGACCACCAGTGGGTCGGTTG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCCAAAGGAAGCCGCTaGCATCATAGGGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASKGSR*HHRVTA
Trigger: GGCTGTCACCCTATGATGCCAGCGGCTTCCTTTGGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGTTCTGAGGAGACATaGGGCCCTCCCATGGGACGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESGSEET*GPPMGR
Trigger: CCGTCCCATGGGAGGGCCCCATGTCTCCTCAGAACC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGAGGTGTTCCGAATaGCACCCGCAGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPERCSE*HPQTAP
Trigger: AGGAGCAGTCTGCGGGTGTCATTCGGAACACCTCTC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAGTGGCTTCAGGTTGTaGGGGAAGACGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSGFRL*GKTMSS
Trigger: GGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCAAAGTCTTTGTGCTaGGCGAGCAGGCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPKSLC*ASRLCS
Trigger: ACTGCAGAGCCTGCTCGCTCAGCACAAAGACTTTGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCTCAAAGAGATGCTaGCCTTCTGGCACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPFSKRC*PSGTRA
Trigger: GGCTCGGGTGCCAGAAGGTCAGCATCTCTTTGAGAA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGAAGCCCTCCAACTCTaGCAGCCTGAAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHEALQL*QPEESR
Trigger: CCTGGATTCTTCAGGCTGTCAGAGTTGGAGGGCTTC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGTGCTGGGAGATGCTaGGTCCTGCTGACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPGAGRC*VLLTVL
Trigger: AAGCACAGTCAGCAGGACTCAGCATCTCCCAGCACC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATCTGAGGCAGGCTGCTaGCCCTCTCCACACTCTGGT +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSSEAGC*PSPHSG
Trigger: ACCAGAGTGTGGAGAGGGTCAGCAGCCTGCCTCAGA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTTGGGTAAAACGTCCTaGGCCCGATGTGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLGKTS*ARCGLP
Trigger: AGGGAGACCACATCGGGCTCAGGACGTTTTACCCAA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCGTTGAACAGGGAGGCTaGCTCCTCCAGCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTVEQGG*LLQQPV
Trigger: GACCGGCTGCTGGAGGAGGCAGCCTCCCTGTTCAAC...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGTGTGGAGAGGCGCTaGGTGATGGGCAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSVERR*VMGSLQ
Trigger: CTGCAAGCTGCCCATCACGCAGCGCCTCTCCACACT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATGACACCCGCAGACTaGTCCTCCAGCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPMTPAD*SSSVSR
Trigger: TCTGGAGACGCTGGAGGAGCAGTCTGCGGGTGTCAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSCLIC*SQAPLD
Trigger: GTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSSCLI*CSQAPL
Trigger: CAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCTGGGCCAGCCTCTaGAGGACCATCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSWASL*RTILNS
Trigger: TGAGTTCAGGATGGTCCTGCAGAGGCTGGCCCAGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGTAGCGTCTCCAGTGTaGCACCAGCTCGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESVASPV*HQLVLG
Trigger: ACCGAGGACGAGCTGGTGGCACACTGGAGACGCTAC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTCCTTCAGCTGGGCTTaGAGCCGGTCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSFSWA*SRSTRG
Trigger: GCCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCACAGCTGCAGATCCTaGAGAGGCCGCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKHSCRS*RGRWKC
Trigger: GCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCTTTCCATCAGGGCTaGCTCGATCTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAFHQG*LDLGQE
Trigger: TTCCTGCCCCAGATCGAGGCAGCCCTGATGGAAAGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTATGGAACCTGCCACCTaGTCCAGGAGTGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESMEPAT*SRSAVA
Trigger: AGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCAT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGCAGGAGGCTGTTATaGAGCAGGTCTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALCRRLL*SRSLSL
Trigger: GAGGGACAGAGACCTGCTGCATAACAGCCTCCTGCA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAAGGTGCAGTGCTCCTaGACACTCTGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKKVQCS*TLCRHL
Trigger: CAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGGCTGAAGGTGCAGTaGTCCTGCACACTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPWLKVQ*SCTLCR
Trigger: TCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCACCTGCAACCACTaGCCAAAGTTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSTCNH*PKFLRS
Trigger: GCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCGAGCCTCCAGCTCCTaGAGCTTCGATTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALRASSS*SFDFLV
Trigger: GACCAGAAAATCGAAGCTGCAGGAGCTGGAGGCTCG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCGAGCCTCCAGCTCCTaGAGCTTCGATTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRASSS*SFDFLV
Trigger: GACCAGAAAATCGAAGCTGCAGGAGCTGGAGGCTCG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGCAGCAGAAGCAGCTaGAGTGGGAGCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSSRSS*SGSATQ
Trigger: CTGTGTGGCGCTCCCACTGCAGCTGCTTCTGCTGCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCAGTTGTTGGCCAGGGTaGAGCTGCGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGSCWPG*SCGPLP
Trigger: GGGAAGAGGACCGCAGCTGCACCCTGGCCAACAACT...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTGCAGTCTTTGCCCTaGCCCTGTTTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLQSLP*PCFQFP
Trigger: GGGAAACTGGAAACAGGGGCAGGGCAAAGACTGCAG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCTGCAGTCTTTGCCCTaGCCCTGTTTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHLQSLP*PCFQFP
Trigger: GGGAAACTGGAAACAGGGGCAGGGCAAAGACTGCAG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCAGCTCTGCAGTCTTTaGCCTGCCCCTGTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALQLCSL*PAPVSS
Trigger: ACTGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTACTGCCAGTGGGTGCTaGCCACCGAGTGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVTASGC*PPSVPH
Trigger: GTGAGGCACACTCGGTGGGCAGCACCCACTGGCAGT...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCTTCCCTTCTCACCTaGAGCTCGAGCTCTCGACGA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKASLLT*SSSSRR
Trigger: TCGTCGAGAGCTCGAGCTGCAGGTGAGAAGGGAAGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGCTTTGGGGTCCTCATTaGCCCATGTTGTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWLWGPH*PMLWVW
Trigger: CCAAACCCACAACATGGGGCAATGAGGACCCCAAAG...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCAGCCTCCCATCCCCTaGAAGGCAGGGCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGQPPIP*KAGQDD
Trigger: ATCATCCTGCCCTGCCTTGCAGGGGATGGGAGGCTG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCTCATCTCCACAGAGGTaGTGGGGATGGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSSSPQR*WGWAGL
Trigger: CAGGCCAGCCCATCCCCAGCACCTCTGTGGAGATGA...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCAGACAGTGGGTACCTaGTCCCGTCCCCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLQTVGT*SRPLGP
Trigger: AGGTCCCAGGGGACGGGAGCAGGTACCCACTGTCTG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGCCAACTCTGTCCTCTaGCTGCCCCCGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENANSVL*LPPQGL
Trigger: CAGCCCTTGCGGGGGCAGGCAGAGGACAGAGTTGGC...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGCACACACACACCCCATaGCATTGCTTGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWHTHTP*HCLVHT
Trigger: AGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTG...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCATTGACCTGCAGCTaGTCCTGCACAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASLTCS*SCTAFI
Trigger: GATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCACGCTTCTGGGCCTTaGCCTTCACTGCATCGTACT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHHASGP*PSLHRT
Trigger: AGTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATCGTCCACACCTGCCTaGTACTCCTCATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSSSTPA*YSSCSR
Trigger: CCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCCTTCAGCCACAGTTaGAACTCGTCCACACCTGCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAFSHS*NSSTPA
Trigger: GGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCTTCAGCCACAGTTaGAACTCGTCCACACCTGCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPAFSHS*NSSTPA
Trigger: GGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCTCCAGGAGTGCCGTaGCTCTCTCCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAPGVP*LSPGQR
Trigger: TCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTTGGACCCTGACCTaGAGGTCCAAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPAWTLT*RSKSFL
Trigger: GAGGAAGCTCTTGGACCTCCAGGTCAGGGTCCAAGC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTTTTGTGCTGGTGGTTaGGGTTCTCCTGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAFCAGG*GSPGPE
Trigger: CTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGCTCCAGCAGCTGGTaGCTGAAGGTGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSSSSW*LKVQCS
Trigger: GGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCTCCAGCTTTTGCGTaGTCACAACGATCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPPAFA*SQRSTA
Trigger: GGCAGTGGATCGTTGTGACCACGCAAAAGCTGGAGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGAGATGCTGACCTTCTaGCACCCGAGCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESEMLTF*HPSLQL
Trigger: GAGCTGGAGGCTCGGGTGCCAGAAGGTCAGCATCTC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCAGTCGGCTCCCCTaGAGAACTTTGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSSRLP*RTLCQQ
Trigger: CTGCTGACACAAAGTTCTCCAGGGGAGCCGACTGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGGGTTAGGTGGGTGGTaGGCCATTGTAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKGLGGW*AIVAQH
Trigger: ATGCTGCGCTACAATGGCCCACCACCCACCTAACCC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCACCCCAGTGGGTTAGGTaGGTGGTGGGCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSPQWVR*VVGHCS
Trigger: GCTACAATGGCCCACCACCCACCTAACCCACTGGGG...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTGTTTCCAGTTTCCCTaGCGAGCATCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHCFQFP*RASSGG
Trigger: CCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCCTCCAGAGTCTTTTCTaGGAAGCGGAAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSLQSLF*EAEGEP
Trigger: GGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGGAG...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTCCTGTGCTGGGCATTaGGGGTGTGGAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSSCAGH*GCGVLS
Trigger: TGACAGAACTCCACACCCCCAATGCCCAGCACAGGA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCCAGATGATCCCCAGTaGGGAAAAGTGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAPDDPQ*GKVGFS
Trigger: TGAGAAGCCCACTTTTCCCCACTGGGGATCATCTGG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATCCCCTGAGAGGAGGTaGCAGGCCGTGGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTSPERR*QAVVAG
Trigger: ACCTGCCACCACGGCCTGCCACCTCCTCTCAGGGGA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGATGCTGCCCCTGCTTTaGAATGTTGCCCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWMLPLL*NVALQL
Trigger: TAGCTGGAGGGCAACATTCCAAAGCAGGGGCAGCAT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAAGGTAGACAGACAGTaGGTACCTGCTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPKVDRQ*VPAPVP
Trigger: GGGGACGGGAGCAGGTACCCACTGTCTGTCTACCTT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CACCTGAGGGCCATGGTGGCCAGTTGGGCTCTGGCCTaGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: HLRAMVASWALA*LPLTVWPWISF
Trigger: GAAACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGCCCTCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGAGAGGTGTTCCGAATaGCACCCGCAGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESERCSE*HPQTAP
Trigger: AGGAGCAGTCTGCGGGTGTCATTCGGAACACCTCTC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGAGAGGTGTTCCGAATaGCACCCGCAGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSERCSE*HPQTAP
Trigger: AGGAGCAGTCTGCGGGTGTCATTCGGAACACCTCTC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCTTCCAGTTCTCCGGTaGTCTTCTCTGCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPLPVLR*SSLHPK
Trigger: CTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGTGAGGGAAGACGATaGGCTCCTTCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKCEGRR*APSAGL
Trigger: AAGCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGTGGCTTCAGGTTGTaGGGGAAGACGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSGFRL*GKTMSS
Trigger: GGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTTCACCTTCAGGCTCTaGTACTCCTGGATGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALFTFRL*YSWMVA
Trigger: CGCTACCATCCAGGAGTATCAGAGCCTGAAGGTGAA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCACCTTCAGGCTCTaGTACTCCTGGATGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPFTFRL*YSWMVA
Trigger: CGCTACCATCCAGGAGTATCAGAGCCTGAAGGTGAA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCAAAGTCTTTGTGCTaGGCGAGCAGGCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPKSLC*ASRLCS
Trigger: ACTGCAGAGCCTGCTCGCTCAGCACAAAGACTTTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCTCAAAGAGATGCTaGCCTTCTGGCACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKFSKRC*PSGTRA
Trigger: GGCTCGGGTGCCAGAAGGTCAGCATCTCTTTGAGAA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGACGCTGACACAGCACTaGTATGGATGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALTLTQH*YGCSSA
Trigger: TGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCACGCTGACACAGCACTaGTATGGATGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPTLTQH*YGCSSA
Trigger: TGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCGGAAGGAGAGCCCTTaGGACAGGCTGAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPRKESP*DRLNSK
Trigger: TTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGAAAGTTGGGAACCATaGAGGCACAGCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSESWEP*RHSLPF
Trigger: GAATGGCAGGCTGTGCCTTCATGGTTCCCAACTTTC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCACAGCCTTCATCCATaGCTGGGCATCCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESHSLHP*LGILHA
Trigger: AGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGTGTTGTCATTGACCTaGAGCTGGTCCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKVLSLT*SWSCTA
Trigger: GGCTGTGCAGGACCAGCTGCAGGTCAATGACAACAC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGCCTTGGCCTTCACTaGATCGTACTCAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALGLGLH*IVLSLH
Trigger: ATGAAGGCTGAGTACGATGCAGTGAAGGCCAAGGCC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGAACTCGTCCACACCTaGCTGGTACTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKELVHT*LVLLML
Trigger: GAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSCLIC*SQAPLD
Trigger: GTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCTTTCCATCAGGGCTaGCTCGATCTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAFHQG*LDLGQE
Trigger: TTCCTGCCCCAGATCGAGGCAGCCCTGATGGAAAGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCAGGCTCTGCAGTTTaGTTTTCCTCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAGSAV*FSSAGG
Trigger: GCCTCCTGCAGAGGAAAAGCAAACTGCAGAGCCTGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCAGGCTCTGCAGTTTaGTTTTCCTCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPAGSAV*FSSAGG
Trigger: GCCTCCTGCAGAGGAAAAGCAAACTGCAGAGCCTGC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCAAGAGCTTCCTCTaGAGGGGCTCAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSKSFL*RGSKAA
Trigger: AGCAGCTTTTGAGCCCCTGCAGAGGAAGCTCTTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGCTCCTGCACACTCTaGCGACACCTGTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESCSCTL*RHLSTR
Trigger: CCTTGTGGACAGGTGTCGGCAGAGTGTGCAGGAGCA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCTGGCTGAAGGTGCAGTaGTCCTGCACACTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSWLKVQ*SCTLCR
Trigger: TCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCA...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTTCTCCGGGAATTCTaGCACCAGCCTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLLREF*HQPLKL
Trigger: GAGTTTGAGAGGCTGGTGGCAGAATTCCCGGAGAAG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCTTCTCCGGGAATTCTaGCACCAGCCTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPLLREF*HQPLKL
Trigger: GAGTTTGAGAGGCTGGTGGCAGAATTCCCGGAGAAG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTTTGCGCGTCGACGATaGCTGGGAATAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALFARRR*LGIGSM
Trigger: CATGGATCCTATTCCCAGGCATCGTCGACGCGCAAA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000554873.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCTGCAGTCTTTGCCCTaGCCCTGTTTCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPLQSLP*PCFQFP
Trigger: GGGAAACTGGAAACAGGGGCAGGGCAAAGACTGCAG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCAGCTCTGCAGTCTTTaGCCTGCCCCTGTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKQLCSL*PAPVSS
Trigger: ACTGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCATATGGATGCAGCTCTaGAGTCTTTGCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPIWMQL*SLCPAP
Trigger: AGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATAT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCGCTAGAGGGAGACGCTaGTTCCAGGTGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTARGRR*FQVQLS
Trigger: GCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGC...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCTCTCCTCGCCTCGTCTaGTGTCAGTACCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGSPRLV*CQYLPI
Trigger: GATGGGCAGGTACTGACAGCAGACGAGGCGAGGAGA...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTACATAAAGCAAGGCTaGAAAGTGCCGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSYIKQG*KVPPKG
Trigger: CCCCTTGGGCGGCACTTTGCAGCCTTGCTTTATGTA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCATTGACCTGCAGCTaGTCCTGCACAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSLTCS*SCTAFI
Trigger: GATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAGGATCCCGGGCTTCTaGTCCCCAGGGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCRIPGF*SPGQHA
Trigger: GGCATGCTGCCCTGGGGACCAGAAGCCCGGGATCCT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCACTGTCTCCTCCCATTaGGCCTTGATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPTVSSH*ALMSFS
Trigger: GCTGAAGGACATCAAGGCCCAATGGGAGGAGACAGT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGCTGGAGCTCGATGTaGGGCTCCAGTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSWSSM*GSSVTI
Trigger: GATGGTCACACTGGAGCCCCACATCGAGCTCCAGCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGCCTTCATTCTCTTCTaGGCATCTTCGTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSAFILF*ASSSTL
Trigger: CAGCGTGGACGAAGATGCCCAGAAGAGAATGAAGGC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCACGCTTCTGGGCCTTaGCCTTCACTGCATCGTACT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKHASGP*PSLHRT
Trigger: AGTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCATGAGCTCCTTCAGCTaGGCTTGCAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLMSSFS*ACSRST
Trigger: GGTGGACCGGCTGCAAGCCCAGCTGAAGGAGCTCAT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTTTTGTGCTGGTGGTTaGGGTTCTCCTGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALFCAGG*GSPGPE
Trigger: CTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCATTTTGTGCTGGTaGTTGGGGTTCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSILCW*LGFSWT
Trigger: GGTCCAGGAGAACCCCAACCACCAGCACAAAATGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGGTCCATTTTGTGCTaGTGGTTGGGGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALWSILC*WLGFSW
Trigger: CCAGGAGAACCCCAACCACCAGCACAAAATGGACCA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGTCCATTTTGTGCTaGTGGTTGGGGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPWSILC*WLGFSW
Trigger: CCAGGAGAACCCCAACCACCAGCACAAAATGGACCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCAGTCGGCTCCCCTaGAGAACTTTGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSSRLP*RTLCQQ
Trigger: CTGCTGACACAAAGTTCTCCAGGGGAGCCGACTGGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCACCGCCGAGTCTTTTaGAATCCAGTCGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESHRRVF*NPVGSP
Trigger: AGGGGAGCCGACTGGATTCCAAAAGACTCGGCGGTG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGGGTTAGGTGGGTGGTaGGCCATTGTAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSGLGGW*AIVAQH
Trigger: ATGCTGCGCTACAATGGCCCACCACCCACCTAACCC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGTGGGTTAGGTGGGTaGTGGGCCATTGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSGLGG*WAIVAQ
Trigger: CTGCGCTACAATGGCCCACCACCCACCTAACCCACT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGTTTCCAGTTTCCCTaGCGAGCATCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPCFQFP*RASSGG
Trigger: CCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGAAACACATCTTTCCTaGGCACTGCCAGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHETHLS*ALPVGA
Trigger: AGCACCCACTGGCAGTGCCCAGGAAAGATGTGTTTC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTCGCCTACACCTGGCTaGAGAGGGCCTGGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVSPTPG*RGPGFG
Trigger: CCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGA...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGGGGATGGGCTGGCCTaGTGTTCCTGGTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTGDGLA*CSWLLS
Trigger: GCTCAGCAACCAGGAACACCAGGCCAGCCCATCCCC...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCCGATGTGGTCTCCCTaGCTTCTGAGAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGPMWSP*LLRDHR
Trigger: CCTGTGGTCTCTCAGAAGCCAGGGAGACCACATCGG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCGAAACTCCGGGGTCCTaGTGTTCCTCCCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLETPGS*CSSLDG
Trigger: GCCATCCAGGGAGGAACACCAGGACCCCGGAGTTTC...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CCCACGAGCACCAAACGAGCACATTCTTTGTCTCCCTaGTCGGTGTTCCCTCTGTCCCGCCACCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTSTKRAHSLSP*SVFPLSRHHWA
Trigger: TGCCCAGTGGTGGCGGGACAGAGGGAACACCGACAAGGGAGACAAAGAATGTGCTCGTTTGGTGCTCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GTGGGCACAGGAGGAAAGCAGCATGCTGCCCCTGCTTaGGAATGTTGCCCTCCAGCTAACTCACCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGTGGKQHAAPA*ECCPPANSPAA
Trigger: GGCAGCTGGTGAGTTAGCTGGAGGGCAACATTCCAAAGCAGGGGCAGCATGCTGCTTTCCTCCTGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGTGAGTCATGTAGGTaGCTGTCTCCTCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSESCR*LSPPIG
Trigger: CCCAATGGGAGGAGACAGTCACCTACATGACTCACT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGTGAGTCATGTAGGTaGCTGTCTCCTCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSESCR*LSPPIG
Trigger: CCCAATGGGAGGAGACAGTCACCTACATGACTCACT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCTTCCAGTTCTCCGGTaGTCTTCTCTGCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKLPVLR*SSLHPK
Trigger: CTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCTGCGGTCCTCTTCCCTaGTTGGGAGCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLCGPLP*LGAGTA
Trigger: TGCTGTTCCTGCTCCCAATCAGGGAAGAGGACCGCA...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCTGGCAAGGAAGGGATaGGTTTCTGGCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLLARKG*VSGLGN
Trigger: GTTCCCGAGGCCAGAAACTCATCCCTTCCTTGCCAG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCAACATGTGGTATATGTaGCAGGCTGCATACATGCCC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVANMWYM*QAAYMP
Trigger: GGGCATGTATGCAGCCTGTCACATATACCACATGTT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCAAAGTCAAGGGCAATaGCTGCAATCCCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPQSQGQ*LQSRWA
Trigger: TGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGACACTTCTGACCTCCTaGGGCTGGGTCAGTCTATTT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALTLLTS*GWVSLF
Trigger: AAATAGACTGACCCAGCCTCAGGAGGTCAGAAGTGT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGGGTGAGAATTAGCTaGGTGCCCATGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESGVRIS*VPMREG
Trigger: TCCCTCTCTCATGGGCACTCAGCTAATTCTCACCCC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCGAATTGAGAGCTTTCTaGGAGGGCTGGTACAGGTGT +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSELRAF*EGWYRC
Trigger: ACACCTGTACCAGCCCTCTCAGAAAGCTCTCAATTC...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGGGATGATGTTACCATaGCAACCGGAGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSGMMLP*QPESRC
Trigger: GCACCTGCTCTCCGGTTGTCATGGTAACATCATCCC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCAGGGGTGGAGGTCATaGGCAGGCCAAACTCACTCT +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLQGWRS*AGQTHS
Trigger: AGAGTGAGTTTGGCCTGCTCATGACCTCCACCCCTG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGCCCTGCAAAACACTaGTTCCTGGAGTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPCPAKH*FLESCV
Trigger: AACGCAGGACTCCAGGAATCAGTGTTTTGCAGGGCA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGCCACACCCACTCGATaGGGCTGTGACAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVATPTR*GCDSES
Trigger: TGACTCACTGTCACAGCCGCATCGAGTGGGTGTGGC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATGGGCGTGGCTCAGCTaGCACTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTWAWLS*HCFSFR
Trigger: CCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSGDLL*TQRRGV
Trigger: AACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCTCCTGGGCCAGCCTCTaGAGGACCATCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTSWASL*RTILNS
Trigger: TGAGTTCAGGATGGTCCTGCAGAGGCTGGCCCAGGA...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATCACCTGCTCCAGGAGTaGCGTGGCTCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHHLLQE*RGSLLA
Trigger: GGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTG...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGCAGGAGGCTGTTATaGAGCAGGTCTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESCRRLL*SRSLSL
Trigger: GAGGGACAGAGACCTGCTGCATAACAGCCTCCTGCA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCAAGAGCTTCCTCTaGAGGGGCTCAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSKSFL*RGSKAA
Trigger: AGCAGCTTTTGAGCCCCTGCAGAGGAAGCTCTTGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCAAGGTGCAGTGCTCCTaGACACTCTGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLKVQCS*TLCRHL
Trigger: CAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGTGCCTCCAGCTTTTaGGTGGTCACAACGATCCAC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPCASSF*VVTTIH
Trigger: GTGGATCGTTGTGACCACGCAAAAGCTGGAGGCACA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCCGCCTCTCCCCGGTGTaGCTCCAGCTTTTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLRLSPV*LQLLRG
Trigger: ACCACGCAAAAGCTGGAGGCACACCGGGGAGAGGCG...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCATCCTCTGCAGATaGCAGTTTCTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSILCR*QFLMRL
Trigger: GAGCCTCATCAGAAACTGGCATCTGCAGAGGATGGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTTTGCGCGTCGACGATaGCTGGGAATAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPFARRR*LGIGSM
Trigger: CATGGATCCTATTCCCAGGCATCGTCGACGCGCAAA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000554873.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCCACCTGCAACCACTaGCCAAAGTTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSTCNH*PKFLRS
Trigger: GCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCGAGCCTCCAGCTCCTaGAGCTTCGATTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGRASSS*SFDFLV
Trigger: GACCAGAAAATCGAAGCTGCAGGAGCTGGAGGCTCG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGAAAGTCACCTGTGTaGCCCAGTGGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESRKSPV*PSGLGG
Trigger: CCCACCTAACCCACTGGGGCACACAGGTGACTTTCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCAGCTCTGCAGTCTTTaGCCTGCCCCTGTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESQLCSL*PAPVSS
Trigger: ACTGGAAACAGGGGCAGGGCAAAGACTGCAGAGCTG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATATGGATGCAGCTCTaGAGTCTTTGCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPIWMQL*SLCPAP
Trigger: AGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGTGAAATGTCCTAGTTaGCTAGGACCCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGVKCPS*LGPGSP
Trigger: TGGGGACCCGGGTCCTAGGCAACTAGGACATTTCAC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGTATATGTGACAGGCTaGATACATGCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHVYVTG*IHAQWL
Trigger: CAGCCACTGGGCATGTATGCAGCCTGTCACATATAC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGAAGCTCTTATCCTGTaGTGGGCATTGGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESEALIL*WALGVW
Trigger: CCACACCCCCAATGCCCAGCACAGGATAAGAGCTTC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAAGCAATCCTCAAGCTaGTCTCTTCTCCCAACCATC +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWKQSSS*SLLPTI
Trigger: GATGGTTGGGAGAAGAGAGCAGCTTGAGGATTGCTT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCTCCCTCGGGGACTCCTaGACTAAGCAATCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGSLGDS*TKQSSS
Trigger: GCTTGAGGATTGCTTAGTGCAGGAGTCCCCGAGGGA...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCGGCACAGGGCACTTCTaGCCACCAACCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCGTGHF*PPTRGE
Trigger: CTCTCCCCTGGTTGGTGGGCAGAAGTGCCCTGTGCC...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTTGACCCACTTCCTCTaGCCGGTATGGTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSLTHFL*PVWFIV
Trigger: GACTATGAACCATACCGGGCAGAGGAAGTGGGTCAA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAGGTCACTCTCACACTaGAAGGATGATGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRSLSH*KDDAFE
Trigger: CTCGAAGGCATCATCCTTGCAGTGTGAGAGTGACCT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCTGCTGAAGCAGCCTaGAGGCACTGGCAATTGGGT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSAEAA*RHWQLG
Trigger: ACCCAATTGCCAGTGCCTGCAGGCTGCTTCAGCAGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGGGCTGGCCTGTCCGTaGTTTTCCAGTGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVGLACP*FSSGKV
Trigger: TACCTTCCCACTGGAAAAGCACGGACAGGCCAGCCC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTACTCACACATGCTATaGTCACATACGCGTGCATCC +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAYSHML*SHTRAS
Trigger: GGATGCACGCGTATGTGAGCATAGCATGTGTGAGTA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTACTGTCTCCTCCCATTaGGCCTTGATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPTVSSH*ALMSFS
Trigger: GCTGAAGGACATCAAGGCCCAATGGGAGGAGACAGT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGATCTACACGCTTCTaGGCCTTGGCCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKRSTRF*ALAFTA
Trigger: TGCAGTGAAGGCCAAGGCCCAGAAGCGTGTAGATCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCCTGGGAAAATCTTTaGCAATGTCCTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPWENL*QCPAVW
Trigger: CCACACTGCAGGACATTGCCAAAGATTTTCCCAGGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALETPRP*ENLWQC
Trigger: ACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGGCTCCCAGGCTCCCCTaGACCGGAGCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTAPRLP*TGAGPA
Trigger: TGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGC...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTTTTGTGCTGGTGGTTaGGGTTCTCCTGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPFCAGG*GSPGPE
Trigger: CTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCATTTTGTGCTGGTaGTTGGGGTTCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSILCW*LGFSWT
Trigger: GGTCCAGGAGAACCCCAACCACCAGCACAAAATGGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCATTTTGTGCTGGTaGTTGGGGTTCTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSILCW*LGFSWT
Trigger: GGTCCAGGAGAACCCCAACCACCAGCACAAAATGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAAGTCGGAGGAAAGCTaGTCCATTTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALKSEES*SILCWW
Trigger: CCACCAGCACAAAATGGACCAGCTTTCCTCCGACTT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCTCCAGCTTTTGCGTaGTCACAACGATCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESPPAFA*SQRSTA
Trigger: GGCAGTGGATCGTTGTGACCACGCAAAAGCTGGAGG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTCAAACTCGGCCTCTTaGGACTCGGCATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSNSAS*DSASPG
Trigger: CCCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCAGAGTCCTTCAGCTTaGACTTGTACAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAQSPSA*TCTAST
Trigger: AGTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKGTDGG*RRKSPV
Trigger: CACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGTTTCCAGTTTCCCTaGCGAGCATCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESCFQFP*RASSGG
Trigger: CCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCCAGGCTGGAGCACAGTaGCACAATGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTQAGAQ*HNVGSL
Trigger: CAGTGAGCCCACATTGTGCCACTGTGCTCCAGCCTG...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCCAGGACTGGACATCTaGGCTTGGCTGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCPGLDI*AWLPGL
Trigger: GAGCCCAGGCAGCCAAGCCCAGATGTCCAGTCCTGG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCTGACTTCCAGGACTaGACATCTGGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSDFQD*TSGLGC
Trigger: GCAGCCAAGCCCAGATGTCCAGTCCTGGAAGTCAGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCTCAGCTCCTCTCCTCTaGGGAGAAATCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGSAPLL*GEILGR
Trigger: CCTGCCTAGGATTTCTCCCCAGAGGAGAGGAGCTGA...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCTGGACAAGGTGGTTaGGTTGGGGATGATGTTACC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAGQGG*VGDDVT
Trigger: GGTAACATCATCCCCAACCCAACCACCTTGTCCAGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGGTGCTGGGGATGGGCTaGCCTGGTGTTCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVVLGMG*PGVPGC
Trigger: GCAACCAGGAACACCAGGCCAGCCCATCCCCAGCAC...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATCGTCCTGGGGCTGCTaGGTCATGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRSSWGC*VMAPAG
Trigger: CCCTGCAGGTGCCATGACTCAGCAGCCCCAGGACGA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCCTCCCATTGGGCCTTaGTGTCCTTCAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSPPIGP*CPSAGP
Trigger: TGGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATTCACCTTCAGGCTCTaGTACTCCTGGATGGTAGCG +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSFTFRL*YSWMVA
Trigger: CGCTACCATCCAGGAGTATCAGAGCCTGAAGGTGAA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCCAAAGTCTTTGTGCTaGGCGAGCAGGCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLPKSLC*ASRLCS
Trigger: ACTGCAGAGCCTGCTCGCTCAGCACAAAGACTTTGG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTACGCTGACACAGCACTaGTATGGATGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESTLTQH*YGCSSA
Trigger: TGCAGAGCTGCATCCATATCAGTGCTGTGTCAGCGT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCTTCTGGGAACGCTaGCACAGCACTGATATGGAT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPVFWER*HSTDMD
Trigger: ATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGAC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGCCCTTGAGACAGGCTaGACTCCAAAGCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSALETG*TPKQIL
Trigger: GAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCAGGCTCACTCAGCTCCTaGTTTTCCAGTAAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSGSLSS*FSSKVV
Trigger: GACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCC...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAACCCTGCCACTGCTCTaGCTTCCAGGACTGGACATC +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTTLPLL*LPGLDI
Trigger: GATGTCCAGTCCTGGAAGTCAGAGCAGTGGCAGGGT...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCCGAGGACCTCATCATaGGACATTAGAGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSPRTSS*DIRGAH
Trigger: ATGAGCCCCTCTAATGTCTCATGATGAGGTCCTCGG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCAGTAAATCAAGCCTaGCATCACCTCTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSVNQA*HHLWPL
Trigger: CAAAGGCCAGAGGTGATGTCAGGCTTGATTTACTGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGGAAGGCAGGGCCAGTaGGCACCTGGGTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSGRQGQ*APGFYF
Trigger: AAAATAAAACCCAGGTGCTCACTGGCCCTGCCTTCC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCAAACAAGAACTGCTaGGGTCTCAGAGTCCTAACC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPNKNC*GLRVLT
Trigger: GGTTAGGACTCTGAGACCTCAGCAGTTCTTGTTTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATGGTTGGGTTGGGGATaGTGTTACCATGACAACCGG +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSWLGWG*CYHDNR
Trigger: CCGGTTGTCATGGTAACATCATCCCCAACCCAACCA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGTTTTTGAAAGTGTCATaGCCATATTGCAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWFLKVS*PYCRRS
Trigger: CGAGCGCCTGCAATATGGTCATGACACTTTCAAAAA...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACCTAGCTGGCTGCTCTaGGGCAGGCTGCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRPSWLL*GRLLTL
Trigger: GAGGGTCAGCAGCCTGCCTCAGAGCAGCCAGCTAGG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCATGGACTCACAACCTaGGAACCCTATTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESHGLTT*EPYSFP
Trigger: GGGGAAGGAATAGGGTTCTCAGGTTGTGAGTCCATG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSGDLL*TQRRGV
Trigger: AACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCTCCTGGCCAAAGATaGCAATCAGGAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPSPGQR*QSGGLS
Trigger: AGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTCTCCTGGCCAAAGATaGCAATCAGGAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSPGQR*QSGGLS
Trigger: AGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCTGCAGGAGGCTGTTATaGAGCAGGTCTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTCRRLL*SRSLSL
Trigger: GAGGGACAGAGACCTGCTGCATAACAGCCTCCTGCA...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACAGTTTGCTTTTCCTCTaGAGGAGGCTGTTATGCAGC +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSLLFL*RRLLCS
Trigger: GCTGCATAACAGCCTCCTGCAGAGGAAAAGCAAACT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCAGGGGCTCAAAAGCTaGTCCAAAGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPQGLKS*SKVFVL
Trigger: CAGCACAAAGACTTTGGAGCAGCTTTTGAGCCCCTG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCAGGGGCTCAAAAGCTaGTCCAAAGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKQGLKS*SKVFVL
Trigger: CAGCACAAAGACTTTGGAGCAGCTTTTGAGCCCCTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGTCCTCCAGAGACCTCTaGAGGGCCTGGAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVSSRDL*RAWKSE
Trigger: CTCCGACTTCCAGGCCCTGCAGAGGTCTCTGGAGGA...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGTGCCTCCAGCTTTTaGGTGGTCACAACGATCCAC +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESCASSF*VVTTIH
Trigger: GTGGATCGTTGTGACCACGCAAAAGCTGGAGGCACA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCATCCTCTGCAGATaGCAGTTTCTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSILCR*QFLMRL
Trigger: GAGCCTCATCAGAAACTGGCATCTGCAGAGGATGGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCACTTCCATCCTCTaGAGATGCCAGTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSTSIL*RCQFLM
Trigger: CATCAGAAACTGGCATCTGCAGAGGATGGAAGTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGGAGTTTTCCACCTaGAACCACTGCCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPLEFST*NHCPKF
Trigger: GAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTTGGAGTTTTCCACCTaGAACCACTGCCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLEFST*NHCPKF
Trigger: GAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTTGGAGTTTTCCACCTaGAACCACTGCCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHLEFST*NHCPKF
Trigger: GAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCAGCAGCAGAAGCAGCTaGAGTGGGAGCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSSRSS*SGSATQ
Trigger: CTGTGTGGCGCTCCCACTGCAGCTGCTTCTGCTGCT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCAGAAAGTCACCTGTGTaGCCCAGTGGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLRKSPV*PSGLGG
Trigger: CCCACCTAACCCACTGGGGCACACAGGTGACTTTCT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGGCACTGCCAGTGGGTaGTGCCCACCGAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVGTASG*CPPSVP
Trigger: AGGCACACTCGGTGGGCAGCACCCACTGGCAGTGCC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGGTTGGGCTCTGGCCTTaGTGCCTCTCACTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVVGLWP*CLSLCG
Trigger: GCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAAC...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTCATTTTCCAAGATTTaGACCCAGGAGCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASFSKI*TQELLK
Trigger: CTTGAGGAGCTCCTGGGTGCAAATCTTGGAAAATGA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGACATGCACAAGCGACTaGCTCCTTGTTTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKTCTSD*LLVSPM
Trigger: CATGGGAGAAACAAGGAGGCAGTCGCTTGTGCATGT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGCCCAGTTGTGCTTCTaGATGGAGATGTGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHAQLCF*MEMCVV
Trigger: TACTACACACATCTCCATGCAGAAGCACAACTGGGC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCAGGGCTGCCCAGTTGTaGTTCTGCATGGAGATGTGT +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSRAAQL*FCMEMC
Trigger: ACACATCTCCATGCAGAAGCACAACTGGGCAGCCCT...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCCTTCATTCTCTTCTaGGCATCTTCGTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAFILF*ASSSTL
Trigger: CAGCGTGGACGAAGATGCCCAGAAGAGAATGAAGGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCAGATCTACACGCTTCTaGGCCTTGGCCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSRSTRF*ALAFTA
Trigger: TGCAGTGAAGGCCAAGGCCCAGAAGCGTGTAGATCT...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPDTIRE*LQVVRE
Trigger: TTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGCTCCAGGAGTGCCGTaGCTCTCTCCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLAPGVP*LSPGQR
Trigger: TCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATAGCCCCTTCTCGGCTTaGACCCTGACCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHSPFSA*TLTWRS
Trigger: GGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCT...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAAGTCGGAGGAAAGCTaGTCCATTTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKKSEES*SILCWW
Trigger: CCACCAGCACAAAATGGACCAGCTTTCCTCCGACTT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCAGCTTCGATTTTCTaGTCCTCAAGTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPAASIF*SSSPQL
Trigger: CAGCTGAGGACTTGAGGACCAGAAAATCGAAGCTGC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESGTDGG*RRKSPV
Trigger: CACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGAAGGGATGAGTTTCTaGCCTCGGGAACTCACATGG +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGEGMSF*PRELTW
Trigger: CCATGTGAGTTCCCGAGGCCAGAAACTCATCCCTTC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCTCCAGCCTGGGCTTTaGGGTCCTCATTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCLQPGL*GPHCPM
Trigger: CATGGGGCAATGAGGACCCCAAAGCCCAGGCTGGAG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCGGACAGCATCCGAATaGCCAGTGGGAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLRTASE*PVGRQG
Trigger: GCCCTGCCTTCCCACTGGCCATTCGGATGCTGTCCG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGATCCCGCTGGGCTATaGACACAGAGGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLDPAGL*TQRLPG
Trigger: GCCAGGAAGCCTCTGTGTCCATAGCCCAGCGGGATC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCAAGCTGTCATCCAGTaGGTGCAGAGACCGACCCCC +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVQAVIQ*VQRPTP
Trigger: GGGGGTCGGTCTCTGCACCCACTGGATGACAGCTTG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAGCTCCCTTCAGCGGTaGGAGTCAACGGACTTCCCC +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCSSLQR*ESTDFP
Trigger: GGGGAAGTCCGTTGACTCCCACCGCTGAAGGGAGCT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTCCAGCCTGGGCTTTGGGGTCCTCATTGCCCCATGTaGTGGGTTTGGACCCACTTCAGCATGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQPGLWGPHCPM*WVWTHFSMSKG
Trigger: ACCCTTGCTCATGCTGAAGTGGGTCCAAACCCACAACATGGGGCAATGAGGACCCCAAAGCCCAGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCTTCCAGTTCTCCGGTaGTCTTCTCTGCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVLPVLR*SSLHPK
Trigger: CTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAAGTGGCTTCAGGTTGTaGGGGAAGACGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTSGFRL*GKTMSS
Trigger: GGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACT...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCCCGGCAGGCTGGCAGTaGCCTCCAAGAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFPAGWQ*PPRAAG
Trigger: CCCAGCGGCTCTTGGAGGTCACTGCCAGCCTGCCGG...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGTCTTCTGGGAACGCTaGCACAGCACTGATATGGAT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESVFWER*HSTDMD
Trigger: ATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGAC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGTCTTCTGGGAACGCTaGCACAGCACTGATATGGAT +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGVFWER*HSTDMD
Trigger: ATCCATATCAGTGCTGTGTCAGCGTTCCCAGAAGAC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGAGCAGGGTACCACCTaGGGGCCATGGTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVEQGTT*GPWWPV
Trigger: AACTGGCCACCATGGCCCTCAGGTGGTACCCTGCTC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGATGTCCCAGGCGAGCTaGTGGGCAGAGAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLMSQAS*WAESSA
Trigger: GGCAGAACTCTCTGCCCATCAGCTCGCCTGGGACAT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCGACATAATCCCAGAATaGAGAGCCAGCGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGDIIPE*RASVWA
Trigger: TGCCCAAACGCTGGCTCTTCATTCTGGGATTATGTC...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCAAGCATCCTGGGCCATaGAGTGACTGTGATATAAAG +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSKHPGP*SDCDIK
Trigger: CTTTATATCACAGTCACTTCATGGCCCAGGATGCTT...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCAGGTACAAAGGATaGAGTGGGTTTGCTCACATA +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSRYKG*SGFAHI
Trigger: TATGTGAGCAAACCCACTTCATCCTTTGTACCTGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGTTGAACAGGGAGGCTaGCTCCTCCAGCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLVEQGG*LLQQPV
Trigger: GACCGGCTGCTGGAGGAGGCAGCCTCCCTGTTCAAC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCGGCCTTGGCCTTCACTaGATCGTACTCAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTGLGLH*IVLSLH
Trigger: ATGAAGGCTGAGTACGATGCAGTGAAGGCCAAGGCC...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGGTCTTTCTTCAGCTaGAGCATCGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESRSFFS*SIVSSS
Trigger: AGAGCTGCTGACGATGCTGCAGCTGAAGAAAGACCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCTCCTGGCCAAAGATaGCAATCAGGAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKSPGQR*QSGGLS
Trigger: AGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGTTTGCTTTTCCTCTaGAGGAGGCTGTTATGCAGC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSLLFL*RRLLCS
Trigger: GCTGCATAACAGCCTCCTGCAGAGGAAAAGCAAACT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGTCACAACGATCCACTaGCGCAGCTCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSVTTIH*RSSSSW
Trigger: CCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGAC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTGTGCCTCCAGCTTTTaGGTGGTCACAACGATCCAC +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVCASSF*VVTTIH
Trigger: GTGGATCGTTGTGACCACGCAAAAGCTGGAGGCACA...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTCCACTTCCATCCTCTaGAGATGCCAGTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPSTSIL*RCQFLM
Trigger: CATCAGAAACTGGCATCTGCAGAGGATGGAAGTGGA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATCCGAGGTCCCCCTTaGTGGCCCGAGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRIRGPP*WPETKE
Trigger: CTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGCTTTCTAGGGTTGACTaGAGACCAAGTCAACAATAC +
Preference number: 4 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWLSRVD*RPSQQY
Trigger: GTATTGTTGACTTGGTCTGCAGTCAACCCTAGAAAG...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGTGAGACAGCAATGGTaGTGGGTATCAGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVVRQQW*WVSGPL
Trigger: AAGAGGGCCTGATACCCAGCACCATTGCTGTCTCAC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACCCTTTTCCTGCCCTCTaGCTGTCATTCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENPFPAL*LSFSLA
Trigger: GGCCAAGGAGAATGACAGGCAGAGGGCAGGAAAAGG...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCTCCCCTGAACCCAGTTaGCACAACTTTCCACGATGT +
Preference number: 4 (lower is better)
Translates to: ASVSERKPRILGGNRGPSSPEPS*HNFPRC
Trigger: ACATCGTGGAAAGTTGTGGCAACTGGGTTCAGGGGA...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCAGGAGGAAAGCAGCATaGTGCCCCTGCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLRRKAA*CPCFGM
Trigger: CATTCCAAAGCAGGGGCAGCATGCTGCTTTCCTCCT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESETPRP*ENLWQC
Trigger: ACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCAGCTTCGATTTTCTaGTCCTCAAGTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESAASIF*SSSPQL
Trigger: CAGCTGAGGACTTGAGGACCAGAAAATCGAAGCTGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATGAGATGCTGACCTTCTaGCACCCGAGCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHEMLTF*HPSLQL
Trigger: GAGCTGGAGGCTCGGGTGCCAGAAGGTCAGCATCTC...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCAGAGTCCTTCAGCTTaGACTTGTACAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKQSPSA*TCTAST
Trigger: AGTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGAGAGGGCCTGGTTTTaGGTGGCCTGGGCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLERAWF*VAWALV
Trigger: GACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCATCCCAGAGTTCCCTaGCAAGGAAGGGATGAGTTT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESHPRVP*QGRDEF
Trigger: AAACTCATCCCTTCCTTGCCAGGGAACTCTGGGATG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTGTGTGAGACAGCAATaGTGCTGGGTATCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVCVRQQ*CWVSGP
Trigger: AGGGCCTGATACCCAGCACCATTGCTGTCTCACACA...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCAGAGAACGGCCCTATaGCTTGGTTTCCAGATATCT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPQRTAL*LGFQIS
Trigger: AGATATCTGGAAACCAAGCCATAGGGCCGTTCTCTG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCGATTTTCCAGTAAGGTaGTCGCCTGCAGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLDFPVR*SPAENG
Trigger: GCCGTTCTCTGCAGGCGACCACCTTACTGGAAAATC...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACCATCAACCGACCCACTaGTGGTCCTTTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENHQPTH*WSFLPP
Trigger: AGGAGGGAGAAAGGACCACCAGTGGGTCGGTTGATG...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAACGGGGCCTGAGAGATaGAATTGGGTCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTTGPER*NWVRSS
Trigger: GGATGACCTGACCCAATTCCATCTCTCAGGCCCCGT...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGGGAGACAAGCATCTTTaGACCCCCGGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLGDKHL*TPGPCR
Trigger: CCTGCAGGGACCGGGGGTCCAAAGATGCTTGTCTCC...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCTCCTTACCAATAGGTaGGGGGAGGTGGTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVLLTNR*GEVVRN
Trigger: GTTCCTTACCACCTCCCCCCACCTATTGGTAAGGAG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCGGTCAGGACAAACTCTaGTTTTCTCCTCCAATTGTA +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAGQDKL*FSPPIV
Trigger: TACAATTGGAGGAGAAAACCAGAGTTTGTCCTGACC...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCTACAAAACAAAGAGCTaGCCTGGAAAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSYKTKS*PGKAQR
Trigger: TCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTA...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCGTTTATGCAGAGGTTaGACTCAAGGCGATCGCAGC +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVRLCRG*TQGDRS
Trigger: GCTGCGATCGCCTTGAGTCCAACCTCTGCATAAACG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTTCCATGCCTTCAGCTaGAAACAGTGTGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPFHAFS*KQCGAK
Trigger: TTTGGCTCCACACTGTTTCCAGCTGAAGGCATGGAA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCAAAACACTGATTCCTaGAGTCCTGCGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKQNTDS*SPALEP
Trigger: TGGCTCTAACGCAGGACTCCAGGAATCAGTGTTTTG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
3UTR CAA 72 bp ACGGGGCCTGAGAGATGGAATTGGGTCAGGTCATCCTaGACCCATTTCCTCTGGAAGGGAGTCGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TGPERWNWVRSS*THFLWKGVGCQ
Trigger: CTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCAATTCCATCTCTCAGGCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATCGAGCTCTCGACGATaGAAACTCAGTCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTSSSRR*KLSPGA
Trigger: TGCTCCTGGACTGAGTTTTCATCGTCGAGAGCTCGA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGCTCCTGGCCTCCCCTaGACCCAGTTGCCACAACTT +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLAPGLP*TQLPQL
Trigger: AAGTTGTGGCAACTGGGTTCAGGGGAGGCCAGGAGC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAGCCCAACACACTTCTaGCCTCCTGAGGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLSPTHF*PPEAGS
Trigger: TGACCCAGCCTCAGGAGGTCAGAAGTGTGTTGGGCT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCTCCAGGATGGGTTCTaGGGAGACATGGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQLQDGF*GDMGPS
Trigger: GGAGGGCCCCATGTCTCCTCAGAACCCATCCTGGAG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACGCTTTGGACTTGATATaGACCGAGATAACACACACA +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHALDLI*TEITHT
Trigger: TGTGTGTGTTATCTCGGTTCATATCAAGTCCAAAGC...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAAGTGTGGAGAGGCGCTaGGTGATGGGCAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRSVERR*VMGSLQ
Trigger: CTGCAAGCTGCCCATCACGCAGCGCCTCTCCACACT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHSCLIC*SQAPLD
Trigger: GTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCT...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCTTTGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCAGGTCTTTCTTCAGCTaGAGCATCGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLVTARGRRCFQVQLSTRSFFS*SIVSSS
Trigger: AGAGCTGCTGACGATGCTGCAGCTGAAGAAAGACCT...GGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGCACCTGCTCCAGGAGTaGCGTGGCTCTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTHLLQE*RGSLLA
Trigger: GGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTG...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATGGAACCTGCCACCTaGTCCAGGAGTGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRMEPAT*SRSAVA
Trigger: AGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCCACTTCCATCCTCTaGAGATGCCAGTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSTSIL*RCQFLM
Trigger: CATCAGAAACTGGCATCTGCAGAGGATGGAAGTGGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGGAGATTGCACTTGTaGTTGGAAGCACCAGTAACT +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKRRLHL*LEAPVT
Trigger: AGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATGTGCCTTTCCACATaGAGAGAACGGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPMCLST*RERAKK
Trigger: TTTCTTAGCCCGTTCTCTGCATGTGGAAAGGCACAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTTGTGCAGCAGCACCTaGGCGTGGCTCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQLCSST*AWLSCH
Trigger: GTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACTGGTCCATTTTGTGCTaGTGGTTGGGGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENWSILC*WLGFSW
Trigger: CCAGGAGAACCCCAACCACCAGCACAAAATGGACCA...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCAGAGTCCTTCAGCTTaGACTTGTACAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESQSPSA*TCTAST
Trigger: AGTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTGTDGG*RRKSPV
Trigger: CACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCC...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCTGGGATTCGCTTTaGAGAAGAGGTTGCCATGAA +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKFWDSL*RRGCHE
Trigger: TTCATGGCAACCTCTTCTCCAAAGCGAATCCCAGAA...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCTCTCACCTCTGTCCTaGACCCTCGATCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQLSPLS*TLDPWP
Trigger: GGGCCAGGGATCGAGGGTCCAGGACAGAGGTGAGAG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCTGGGCTTGGCTGCCTaGGCTCACTCAGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLLGLAA*AHSAPD
Trigger: ATCAGGAGCTGAGTGAGCCCAGGCAGCCAAGCCCAG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCTGGGCATTGGGGGTGTaGAGTTCTGTCATTCATGAC +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLWALGV*SSVIHD
Trigger: GTCATGAATGACAGAACTCCACACCCCCAATGCCCA...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCATCCGAATGGCCAGTaGGAAGGCAGGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHPNGQ*EGRASE
Trigger: CTCACTGGCCCTGCCTTCCCACTGGCCATTCGGATG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCCTGAGGGCAGGGACTaGGCTTTGTTCACCCCGAAT +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSPEGRD*ALFTPN
Trigger: ATTCGGGGTGAACAAAGCCCAGTCCCTGCCCTCAGG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGACTGTGAGGTCCATTaGGTCAGAGAGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLDCEVH*VREWGV
Trigger: CACTCCCCACTCTCTGACCCAATGGACCTCACAGTC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGGATTCTGTTACTCGTaGCTGAATCTAGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPGFCYS*LNLGIS
Trigger: AGAAATCCCTAGATTCAGCCACGAGTAACAGAATCC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGAGCCCCCATCTTTTTaGGGCACATGTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTEPPSF*GTCSQT
Trigger: AGTCTGGGAACATGTGCCCCAAAAAGATGGGGGCTC...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGCAGCCTGCAGGCACTaGCAATTGGGTGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVAACRH*QLGDEG
Trigger: GCCCTCATCACCCAATTGCCAGTGCCTGCAGGCTGC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGTTGCTGTCTCTCGGCTaGACAAGGTGGTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVLLSLG*TRWLGW
Trigger: CCAACCCAACCACCTTGTCCAGCCGAGAGACAGCAA...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCATAGAGTGGAGCACTaGGCTCGGAGCCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLHRVEH*ARSQSC
Trigger: GCATGACTGGCTCCGAGCCCAGTGCTCCACTCTATG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCTCCCATGAGAGGAATTaGAACTGCTCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLSHERN*NCSAGR
Trigger: TCTGCCTGCTGAGCAGTTCCAATTCCTCTCATGGGA...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAAAAACTCTGGACTTTaGGTAAAACGTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKKNSGL*VKRPEP
Trigger: GGGCTCAGGACGTTTTACCCAAAGTCCAGAGTTTTT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCATCATCAGCGTCATCTaGGAGCAGCTTCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSIISVI*EQLQKH
Trigger: ATGTTTTTGAAGCTGCTCCCAGATGACGCTGATGAT...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGATTGATGAGAAATCCTaGCTTTGGGATGTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALIDEKS*LWDVVG
Trigger: ACCAACAACATCCCAAAGTCAGGATTTCTCATCAAT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACATTGATGAGAAATCCTaGCTTTGGGATGTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHIDEKS*LWDVVG
Trigger: ACCAACAACATCCCAAAGTCAGGATTTCTCATCAAT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCTTCTCAAAGAGATGCTaGCCTTCTGGCACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSFSKRC*PSGTRA
Trigger: GGCTCGGGTGCCAGAAGGTCAGCATCTCTTTGAGAA...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTTTTCATGTAGTTGCTaGCATGAGCGGATCATACCA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPFSCSC*HERIIP
Trigger: TGGTATGATCCGCTCATGTCAGCAACTACATGAAAA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCTCAACAAACCACAGCTaGAGCTCTTATCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLSTNHS*SSYPVL
Trigger: CAGCACAGGATAAGAGCTTCAGCTGTGGTTTGTTGA...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCAAGGCAGGGCAGGATaGTGCCACCGGTCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQQGRAG*CHRSQF
Trigger: AAACTGGGACCGGTGGCATCATCCTGCCCTGCCTTG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGCAAGAGATTATCCTTaGGCATGGACACGCCAACCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLARDYP*AWTRQP
Trigger: GGGTTGGCGTGTCCATGCTCAAGGATAATCTCTTGC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACGAGGTCCCTCCTTATaGTTGCTGTCTCTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRRGPSL*LLSLGW
Trigger: CCAGCCGAGAGACAGCAATCATAAGGAGGGACCTCG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGGGTGCTTCTGTCTTaGACACTTTCTGACATTTGT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPWVLLS*TLSDIC
Trigger: ACAAATGTCAGAAAGTGTTCAAGACAGAAGCACCCA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCACAGCCTTCATCCATaGCTGGGCATCCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHSLHP*LGILHA
Trigger: AGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCGCCGCGCGGGGTCCCTaGGTGTTGTCATTGACCTGC +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFAARGP*VLSLTC
Trigger: GCAGGTCAATGACAACACGCAGGGACCCCGCGCGGC...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTAGGTACTCGCTCCAGTaGAGCCACACCCACTCGATG +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVRYSLQ*SHTHSM
Trigger: CATCGAGTGGGTGTGGCTGCACTGGAGCGAGTACCT...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGGGCCTTGGCCTTCACTaGATCGTACTCAGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVGLGLH*IVLSLH
Trigger: ATGAAGGCTGAGTACGATGCAGTGAAGGCCAAGGCC...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLSSCLI*CSQAPL
Trigger: CAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGA...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCCAGCGCCGCCCGTGTTaGCGAGTAGCGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFQRRPC*RVASPV
Trigger: CACTGGAGACGCTACTCGGCAACACGGGCGGCGCTG...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCATCCTTCAGCTGGGCTTaGAGCCGGTCCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPSFSWA*SRSTRG
Trigger: GCCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGA...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFPPPRH*AASRSS
Trigger: TGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGG...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCAGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCG +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPGRWKC*HSSTAA
Trigger: CGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCC...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCTTCTCCGGGAATTCTaGCACCAGCCTCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVLLREF*HQPLKL
Trigger: GAGTTTGAGAGGCTGGTGGCAGAATTCCCGGAGAAG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGTCTTCGCGTCGACGATaGCTGGGAATAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVSSRRR*LGIGSM
Trigger: CATGGATCCTATTCCCAGGCATCGTCGACGCGAAGA...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCCCTGGCGTGGCAGATaGTTCCCTTCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRPWRGR*FPSHLQ
Trigger: CTGCAGGTGAGAAGGGAAGCATCTGCCACGCCAGGG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTAGTAAGGTGGTCGCCTaGAGAGAACGGCCCTATGGC +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSKVVA*RERPYG
Trigger: GCCATAGGGCCGTTCTCTGCAGGCGACCACCTTACT...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAGGGAAACATTTGGATaGTCCGCTCTGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCRETFG*SALAMS
Trigger: GGACATGGCCAGAGCGGAGCATCCAAATGTTTCCCT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAGCAAGACACTCTCATaGCCTGTTCCGAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLSKTLS*PVPSSP
Trigger: GGGAGAGCTCGGAACAGGGCATGAGAGTGTCTTGCT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTTGTTCCCAGACTCCTTaGAGATGTGGGGGAAAACAT +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVCSQTP*RCGGKH
Trigger: ATGTTTTCCCCCACATCTGCAAGGAGTCTGGGAACA...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGTCCCTCCTTATGATTaGTGTCTCTCGGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENVPPYD*CLSAGQ
Trigger: TTGTCCAGCCGAGAGACAGCAATCATAAGGAGGGAC...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGCTCGGAGCCAGTCATaGCTGGGTACAAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSARSQS*LGTSPK
Trigger: TTTGGGACTTGTACCCAGGCATGACTGGCTCCGAGC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAAAGTCTCTGTTGGGTaGTTCTGTCTTGAACACTTT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPKVSVG*FCLEHF
Trigger: AAAGTGTTCAAGACAGAAGCACCCAACAGAGACTTT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CCA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGTTGTGCAGCAGCACCTaGGCGTGGCTCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQLCSST*AWLSCH
Trigger: GTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAA...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGCTTGGACCCTGACCTaGAGGTCCAAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRAWTLT*RSKSFL
Trigger: GAGGAAGCTCTTGGACCTCCAGGTCAGGGTCCAAGC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCCTCCAGCTTTTGCGTaGTCACAACGATCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSPPAFA*SQRSTA
Trigger: GGCAGTGGATCGTTGTGACCACGCAAAAGCTGGAGG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTACCACAAAATCCCATTaGAGGGAGCCATTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVTTKSH*REPLLG
Trigger: TCCTAGCAATGGCTCCCTCCAATGGGATTTTGTGGT...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCAGACAGCAATGGTGCTaGGTATCAGGCCCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLRQQWC*VSGPLR
Trigger: CCTAAGAGGGCCTGATACCCAGCACCATTGCTGTCT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGTAATCCCAGTGCTTTaGGACGCTGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVVIPVL*DAEVGG
Trigger: TCCGCCCACCTCAGCGTCCCAAAGCACTGGGATTAC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAACTTGATGGAAGGATaGAGAGTCTACAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESNLMEG*RVYRAC
Trigger: ACAAGCCCTGTAGACTCTCCATCCTTCCATCAAGTT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATTGTGACATAGGAAAGTaGACACCTGGCAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHCDIGK*TPGKAP
Trigger: GGGGGCCTTGCCAGGTGTCCACTTTCCTATGTCACA...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCCCTCAGGGAAACATTTaGATGCTCCGCTCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLPQGNI*MLRSGH
Trigger: ATGGCCAGAGCGGAGCATCCAAATGTTTCCCTGAGG...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCTTGACCCATTTCCTCTaGAAGGGAGTCGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCLTHFL*KGVGCQ
Trigger: CTGACACCCGACTCCCTTCCAGAGGAAATGGGTCAA...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGAATGCTTGTTGCATTaGATTAAGATGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALECLLH*IKMQRG
Trigger: GCCTCTTTGCATCTTAATCCAATGCAACAAGCATTC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCGACTCCTTGCAGATGTaGGGGAAAACATGTGACACA +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLDSLQM*GKTCDT
Trigger: TGTGTCACATGTTTTCCCCCACATCTGCAAGGAGTC...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCAAATATGCATTGCCTaGGCTGAATCCAAACACAAA +
Preference number: 4 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHQICIA*AESKHK
Trigger: TTTGTGTTTGGATTCAGCCCAGGCAATGCATATTTG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCTGGCCTGGTGTTCCTaGTTGCTGAGCTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSLAWCS*LLSSEA
Trigger: TGCTTCTGAGCTCAGCAACCAGGAACACCAGGCCAG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp TGCAAGGCAGGGCAGGATGATGCCACCGGTCCCAGTTaGCCAGCTGTAAAATCCATTAGGGAACATCCAGCA +
Preference number: 4 (lower is better)
Translates to: CKAGQDDATGPS*PAVKSIREHPA
Trigger: TGCTGGATGTTCCCTAATGGATTTTACAGCTGGCAAACTGGGACCGGTGGCATCATCCTGCCCTGCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTTCGTCCTGGGGCTGCTaGGTCATGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFSSWGC*VMAPAG
Trigger: CCCTGCAGGTGCCATGACTCAGCAGCCCCAGGACGA...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATGTGAGGGAAGACGATaGGCTCCTTCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRCEGRR*APSAGL
Trigger: AAGCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATTGATGAGAAATCCTaGCTTTGGGATGTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPIDEKS*LWDVVG
Trigger: ACCAACAACATCCCAAAGTCAGGATTTCTCATCAAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR TCA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGATTTAGGAAAAACATaGTCCAGTTGTAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPDLGKT*SSCRAL
Trigger: AAGTGCTCTACAACTGGATCATGTTTTTCCTAAATC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATGTGCTGCTGGTGGTaGCTCATCTCAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRMCCWW*LISELR
Trigger: CCTCAGCTCTGAGATGAGTCACCACCAGCAGCACAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGACCTCCCTCCAATGCTaGCCTAGACTGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLTSLQC*PRLVTM
Trigger: CATTGTCACCAGTCTAGGTCAGCATTGGAGGGAGGT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTCACATAAGAAAATaGTTGATTGGCAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPAHIRK*LIGSSL
Trigger: CAAGCTACTGCCAATCAATCATTTTCTTATGTGAGC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCACAGTCCTGGCCAATaGGATGAGAACGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLHSPGQ*DENGSG
Trigger: GCCACTTCCGTTCTCATCTCATTGGCCAGGACTGTG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGGAAAGGAAAGCAACTaGGGCCCAGGGAACATTCCA +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSGKESN*GPGNIP
Trigger: TGGAATGTTCCCTGGGCCTCAGTTGCTTTCCTTTCC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGAGTGTGGAGAGGCGCTaGGTGATGGGCAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTSVERR*VMGSLQ
Trigger: CTGCAAGCTGCCCATCACGCAGCGCCTCTCCACACT...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCGCTTTCGCCGCAGGCTaGAGGCCCTCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVAFAAG*RPSWAS
Trigger: GCTGGCCCAGGAGGGCCTGCAGCCTGCGGCGAAAGC...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCACAGCTGCAGATCCTaGAGAGGCCGCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRHSCRS*RGRWKC
Trigger: GCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCAGGGGCTCAAAAGCTaGTCCAAAGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCQGLKS*SKVFVL
Trigger: CAGCACAAAGACTTTGGAGCAGCTTTTGAGCCCCTG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGTAGAAGTTCTCATTaGGATGATTCTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: LPCPCFQFPWRASSGGALCRSSH*DDSNQL
Trigger: AAGCTGGTTAGAATCATCGCAATGAGAACTTCTACA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGCAGAGAGTTCTGCCTaGTTGCCCAGGGAACTCCAT +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRAESSA*LPRELH
Trigger: ATGGAGTTCCCTGGGCAAGCAGGCAGAACTCTCTGC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCAGACCACCATAAAGTaGAGTTCCTCAAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLQTTIK*SSSKLL
Trigger: CAGAAGCTTTGAGGAACTGCACTTTATGGTGGTCTG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGGTCAAGGGCAATGACTaGAATCCCGTTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVVKGND*NPVGHL
Trigger: AAGATGCCCAACGGGATTGCAGTCATTGCCCTTGAC...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGAGCAAGGGCTGTAGTTaGCCACACCTCCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLSKGCS*PHLPPM
Trigger: CATTGGAGGGAGGTGTGGGCAACTACAGCCCTTGCT...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCAACCGGAGAGCAGGTaGTGGGAGATGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQQPESR*WEMLSP
Trigger: AGGACTCAGCATCTCCCAGCACCTGCTCTCCGGTTG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGACCTCATCCTGGTGTTaGCAGCTCCCTTCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQTSSWC*QLPSAV
Trigger: CACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGCTGGAAGCCAGGGCTaGCCAGTTGTGCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQAGSQG*PVVLLH
Trigger: ATGCAGAAGCACAACTGGGCAGCCCTGGCTTCCAGC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAAAGAATACAGTTGCTaGATTTTCCAGAGCAGACCT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPKEYSC*IFQSRP
Trigger: AGGTCTGCTCTGGAAAATGCAGCAACTGTATTCTTT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CCA 90 bp GGTTCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTGGCTCAGGATCCCGGGCTTCTaGTCCCCAGGGCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: GSVEVKGQISTKGLNFWLRIPGF*SPGQHA
Trigger: GGCATGCTGCCCTGGGGACCAGAAGCCCGGGATCCT...GAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGCAGCACCTGGGCGTaGCTCAGCTGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFSSTWA*LSCHCF
Trigger: GAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCT...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCATTTCTCTAGATATTTaGAAACCAAGTCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAISLDI*KPSHRV
Trigger: AACCCTGTGACTTGGTTTCCAAATATCTAGAGAAAT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCCTGCCTCTCACTGTGTaGCCATGGATCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCLPLTV*PWISFF
Trigger: GAAGAAACTGATCCATGGCCACACAGTGAGAGGCAG...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCCCTGAGAGATGGAATTaGGTCAGGTCATCCTTGACC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLPERWN*VRSSLT
Trigger: GGTCAAGGATGACCTGACCCAATTCCATCTCTCAGG...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAAGCCTGGCACAGGCTaGAGAATGCTTGTTGCATTG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCKPGTG*RMLVAL
Trigger: CAATGCAACAAGCATTCTCCAGCCTGTGCCAGGCTT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAGACAGACTAATAATTaGGCTAGTAATGGACACGAC +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPRQTNN*ASNGHD
Trigger: GTCGTGTCCATTACTAGCCCAATTATTAGTCTGTCT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGACACAGAGGCTTCCTaGCAATCACTGCAGACACCG +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVDTEAS*QSLQTP
Trigger: CGGTGTCTGCAGTGATTGCCAGGAAGCCTCTGTGTC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCCACCAGCTGCCAGAGTaGCAGCAGCCCGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAHQLPE*QQPAAC
Trigger: GCAGGCCGCGGGCTGCTGCCACTCTGGCAGCTGGTG...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTCCAGAGTCTTTTCTGGGAAGCGGAAGGAGAGCCCTaGAGACAGGCTGAACTCCAAAGCAGATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LQSLFWEAEGEP*RQAELQSRFSH
Trigger: GTGAGAGAATCTGCTTTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGCTTCCCAGAAAAGACTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CAAACCACAGCTGAAGCTCTTATCCTGTGCTGGGCATaGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGA +
Preference number: 4 (lower is better)
Translates to: QTTAEALILCWA*GVWSSVIHDRG
Trigger: TCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCACAGGATAAGAGCTTCAGCTGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AAGGGTCTAAATTTCTGGCTCACGGCAGCTGTTGCTTaGCTGGTTACTGCTAGAGGGAGACGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KGLNFWLTAAVA*LVTARGRRCFQ
Trigger: CTGGAAGCAGCGTCTCCCTCTAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGGAGAGGTGTTCCGAATaGCACCCGCAGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTERCSE*HPQTAP
Trigger: AGGAGCAGTCTGCGGGTGTCATTCGGAACACCTCTC...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTCTTCCCTTTCTCCCTaGATGAAACACACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSSLSP*MKHTEQ
Trigger: CTGCTCTGTGTGTTTCATTCAGGGAGAAAGGGAAGA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAAAGGAGACCAGAATTaGGAGCTTTCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCKGDQN*ELSERA
Trigger: AGCCCTCTCAGAAAGCTCTCAATTCTGGTCTCCTTT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTCCTGGCCAATGAGATaGGAACGGAAGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQSWPMR*ERKWLV
Trigger: CACCAGCCACTTCCGTTCTCATCTCATTGGCCAGGA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGGCCACACCCACTCGATaGGGCTGTGACAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQATPTR*GCDSES
Trigger: TGACTCACTGTCACAGCCGCATCGAGTGGGTGTGGC...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCTGGGCGTGGCTCAGCTaGCACTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFWAWLS*HCFSFR
Trigger: CCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCA...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGATGACACCCGCAGACTaGTCCTCCAGCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQMTPAD*SSSVSR
Trigger: TCTGGAGACGCTGGAGGAGCAGTCTGCGGGTGTCAT...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTSSCLI*CSQAPL
Trigger: CAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGA...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCAAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPRGRWK*CHSSTA
Trigger: GGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCT...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAGGTCTTTCTTCAGCTaGAGCATCGTCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLRSFFS*SIVSSS
Trigger: AGAGCTGCTGACGATGCTGCAGCTGAAGAAAGACCT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTTGTAGAAGTTCTCATTaGGATGATTCTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPCRSSH*DDSNQL
Trigger: AAGCTGGTTAGAATCATCGCAATGAGAACTTCTACA...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR GCA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCGTATTGTTTCACTTaGCTTTGGTCAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: WRASSGGALGLMEVGGESSYCFT*LWSVKA
Trigger: AGCTTTCACTGACCAAAGGCAAGTGAAACAATACGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTGGGAGGGGCTGTTCCTaGACAAAAACTCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRGRGCS*TKTLAS
Trigger: GCTTGCCAGAGTTTTTGTGCAGGAACAGCCCCTCCC...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATTGCTTGGTCCACACTaGATGAAACACACCATTCCA +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTLLGPH*MKHTIP
Trigger: TGGAATGGTGTGTTTCATGCAGTGTGGACCAAGCAA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAAAAAGAATACAGTTaGTGCATTTTCCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPEKEYS*CIFQSR
Trigger: TCTGCTCTGGAAAATGCAGCAACTGTATTCTTTTTC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CCA 90 bp GGTTCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTGGCTCTCCTTCAGGCCCAGCTaGAGCTCGATGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GSVEVKGQISTKGLNFWLSFRPS*SSMWGS
Trigger: GGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGA...GAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAAGTCGGAGGAAAGCTaGTCCATTTTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLKSEES*SILCWW
Trigger: CCACCAGCACAAAATGGACCAGCTTTCCTCCGACTT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTTCCAGTCGGCTCCCCTaGAGAACTTTGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRSSRLP*RTLCQQ
Trigger: CTGCTGACACAAAGTTCTCCAGGGGAGCCGACTGGA...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACACATGAGACCTTCTTaGCCCCATAGACCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRHMRPS*PHRPAV
Trigger: GACAGCAGGTCTATGGGGCCAAGAAGGTCTCATGTG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCAACGGCCCTATGGCTTaGTTTCCAGATATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLNGPMA*FPDIWR
Trigger: TCTCCAGATATCTGGAAACCAAGCCATAGGGCCGTT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCCCATGTTGTGGGTTTaGACCCACTTCAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLPMLWV*THFSMS
Trigger: GCTCATGCTGAAGTGGGTCCAAACCCACAACATGGG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTCATTGCCCCATGTTGTaGGTTTGGACCCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVHCPML*VWTHFS
Trigger: GCTGAAGTGGGTCCAAACCCACAACATGGGGCAATG...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTCCCAGCACAAAGCCTaGCACAGGCTGGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQSQHKA*HRLENA
Trigger: AGCATTCTCCAGCCTGTGCCAGGCTTTGTGCTGGGA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTTGGGCATCTTCAATaGCACAAACCCTTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTVGHLQ*HKPFSS
Trigger: CGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAAC...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGAACAAGACAGTCTATaGAAGCCCTCCAACTCTGAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLEQDSL*KPSNSD
Trigger: GTCAGAGTTGGAGGGCTTCCATAGACTGTCTTGTTC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGAGAACGGAAGTGGCTaGTGGAGCTTCTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQENGSG*WSFWES
Trigger: GCTTTCCCAGAAGCTCCACCAGCCACTTCCGTTCTC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGGTTATCTACCTATTTaGAATTGGCACCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: LASILRRGPGTDGGWRRKGYLPI*NWHHLF
Trigger: GAAAAGATGGTGCCAATTCCAAATAGGTAGATAACC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR TCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCCCTGCGTGTTGTCATTaGCCTGCAGCTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFPACCH*PAAGPA
Trigger: TGCAGGACCAGCTGCAGGTCAATGACAACACGCAGG...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACCCTCCCATTGGGCCTTaGTGTCCTTCAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNPPIGP*CPSAGP
Trigger: TGGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGG...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACCTCCTGGGTTCAAGTaGTTCTGGTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPPPGFK*FWCLGL
Trigger: GAGGCCGAGGCACCAGAATCACTTGAACCCAGGAGG...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGCCTTTCATTACATCTaGATTCTGGGATTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENAFHYI*ILGFAL
Trigger: CAAAGCGAATCCCAGAATTCAGATGTAATGAAAGGC...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATATGGGGATGCACATaGGACCTTCTTGGCCCCATA +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRIWGCT*DLLGPI
Trigger: TATGGGGCCAAGAAGGTCTCATGTGCATCCCCATAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATACAATGAGATTGGGGTaGGAATTAGCTGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHTMRLG*ELAECP
Trigger: TGGGCACTCAGCTAATTCTCACCCCAATCTCATTGT...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTACCTGGAACCCAGATaGAAAATTGGAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLYLEPR*KIGGTA
Trigger: TGCTGTACCTCCAATTTTTCATCTGGGTTCCAGGTA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTTGGTCCACACTGCATaGAACACACCATTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLLVHTA*NTPFQL
Trigger: TAGCTGGAATGGTGTGTTTCATGCAGTGTGGACCAA...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSGDLL*TQRRGV
Trigger: AACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGA...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGGCAGGCTCTGCAGTTTaGTTTTCCTCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTAGSAV*FSSAGG
Trigger: GCCTCCTGCAGAGGAAAAGCAAACTGCAGAGCCTGC...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGATCCATCCTCTGCAGATaGCAGTTTCTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRSILCR*QFLMRL
Trigger: GAGCCTCATCAGAAACTGGCATCTGCAGAGGATGGA...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGATATGGATGCAGCTCTaGAGTCTTTGCCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQIWMQL*SLCPAP
Trigger: AGGGGCAGGGCAAAGACTGCAGAGCTGCATCCATAT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGGCTCACCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTAHLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGTGAGC...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCATGTGCCTCACCATTCTaGATGGAAATCTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSCASPF*MEILKI
Trigger: GATTTTTAAGATTTCCATGCAGAATGGTGAGGCACA...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTTCTGGGTGCTGCATGTaGCTTTCCACATGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSGCCM*LSTCRE
Trigger: TTCTCTGCATGTGGAAAGGCACATGCAGCACCCAGA...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTAGAGGCTACAGAGACTaGAACCTGGTAGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRRGYRD*NLVEPA
Trigger: GGCTGGTTCTACCAGGTTGCAGTCTCTGTAGCCTCT...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTGATTTCTCTTCCAGATaGGAGCCCACGCGCACAATC +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRDFSSR*EPTRTI
Trigger: GATTGTGCGCGTGGGCTCGCATCTGGAAGAGAAATC...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCAGCAGCCCGCGGCCTaGAAAGGAAAGGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFQQPAA*KGKESN
Trigger: GTTGCTTTCCTTTCCTTTGCAGGCCGCGGGCTGCTG...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACCTGCTTTGGAATGTTaGCCTCCAGCTAACTCACCA +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRPALEC*PPANSP
Trigger: TGGTGAGTTAGCTGGAGGGCAACATTCCAAAGCAGG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCGGCTCCAATACTGCTTaGCTTCCCAGAAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCGSNTA*LPRKLN
Trigger: ATTAAGCTTTCTGGGAAGGCAAGCAGTATTGGAGCC...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCCCTGGGAAAATCTTTaGCAATGTCCTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLPWENL*QCPAVW
Trigger: CCACACTGCAGGACATTGCCAAAGATTTTCCCAGGG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRETPRP*ENLWQC
Trigger: ACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTC...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATGAGCTCCTTCAGCTaGGCTTGCAGCCGGTCCACC +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFMSSFS*ACSRST
Trigger: GGTGGACCGGCTGCAAGCCCAGCTGAAGGAGCTCAT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCGCTTGGACCCTGACCTaGAGGTCCAAGAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFAWTLT*RSKSFL
Trigger: GAGGAAGCTCTTGGACCTCCAGGTCAGGGTCCAAGC...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCATTACATCTGAATTCTaGGATTCGCTTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGITSEF*DSLWRR
Trigger: TCTTCTCCAAAGCGAATCCCAGAATTCAGATGTAAT...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACTCTGGAAAGGCAGATaGGCAAAGTCAAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRLWKGR*AKSRAM
Trigger: CATTGCCCTTGACTTTGCCCATCTGCCTTTCCAGAG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGTACAAAGGATGAAGTaGGTTTGCTCACATAGACTT +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVVQRMK*VCSHRL
Trigger: AAGTCTATGTGAGCAAACCCACTTCATCCTTTGTAC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCTACCTATTTGGAATTaGCACCATCTTTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: FALPLFPVSLASILRRGPLPIWN*HHLFHL
Trigger: TAAATGGAAAAGATGGTGCCAATTCCAAATAGGTAG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554873.5
3UTR CAA 72 bp TGGGCTTTGGGGTCCTCATTGCCCCATGTTGTGGGTTaGGACCCACTTCAGCATGAGCAAGGGTCTTTATAT +
Preference number: 4 (lower is better)
Translates to: WALGSSLPHVVG*DPLQHEQGSLY
Trigger: ATATAAAGACCCTTGCTCATGCTGAAGTGGGTCCAAACCCACAACATGGGGCAATGAGGACCCCAAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AAAGCTTTGCCACTAGCGCTTGTCCTCAGAGGAAAGTaGGGAACCATGAAGGCACAGCCTGCCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: KALPLALVLRGK*GTMKAQPAIPI
Trigger: AATGGGAATGGCAGGCTGTGCCTTCATGGTTCCCAACTTTCCTCTGAGGACAAGCGCTAGTGGCAAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CAGACACACACACACACACACACACACCCCATGCCATaGCTTGGTCCACACTGCATGAAACACACCATTCCA +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMP*LGPHCMKHTIP
Trigger: TGGAATGGTGTGTTTCATGCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGTGGCTTCAGGTTGTaGGGGAAGACGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFSGFRL*GKTMSS
Trigger: GGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACT...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp GGTTCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTGGCTCCCTCACCTGCAACCTTaGGAGCTGGGCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSVEVKGQISTKGLNFWLPHLQP*ELGLFS
Trigger: GGAAAACAGGCCCAGCTCTCAAGGTTGCAGGTGAGG...GAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCCTCGTATTTGTAGTTaGACAGACAAAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVPRICS*TDKIHL
Trigger: CAAATGGATTTTGTCTGTTCAACTACAAATACGAGG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCAAGGGTCAGTGTGTGTaGGACAGCAATGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFKGQCV*DSNGAG
Trigger: CCCAGCACCATTGCTGTCTCACACACACTGACCCTT...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGAAAAAGTACGCTTTCTaGGTCAGCCCCAAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQKKYAF*VSPKGS
Trigger: AGAGCCCTTGGGGCTGACTCAGAAAGCGTACTTTTT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGGTGATCAACTATTTTaGTGTCTGTCTTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLGDQLF*CLSWKQ
Trigger: CTGCTTCCAAGACAGACATCAAAATAGTTGATCACC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCATGCATTGCCTGGGCTaGATCCAAACACAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSMHCLG*IQTQRK
Trigger: CTTTCTTTGTGTTTGGATTCAGCCCAGGCAATGCAT...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACACAGCCTTCATCCATaGCTGGGCATCCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPHSLHP*LGILHA
Trigger: AGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTG...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACTGGTTGTCCACGTTGTaGAGCAGCACCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNWLSTL*SSTWAW
Trigger: CCACGCCCAGGTGCTGCTGCACAACGTGGACAACCA...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCGCAGGCTCTGCAGTTTaGTTTTCCTCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFAGSAV*FSSAGG
Trigger: GCCTCCTGCAGAGGAAAAGCAAACTGCAGAGCCTGC...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCCCCACCCACCCACCCTaGCACTGCTCTGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAPTHPP*HCSDFQ
Trigger: CTGGAAGTCAGAGCAGTGGCAGGGTGGGTGGGTGGG...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCTGGAGAATGCTTGTTaGATTGGATTAAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLLENAC*IGLRCK
Trigger: TTTGCATCTTAATCCAATGCAACAAGCATTCTCCAG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGTTCATCCCATTGTCTaGTTTCTGGGGCTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSVHPIV*FLGLVC
Trigger: ACAAACTAGCCCCAGAAAGCAGACAATGGGATGAAC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTAGGAAAGCAGCATGCTaGCCCTGCTTTGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRRKAAC*PCFGML
Trigger: CAACATTCCAAAGCAGGGGCAGCATGCTGCTTTCCT...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCTGTAGTACTCACACATaGTATGCTCACATACGCGTG +
Preference number: 4 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSCSTHT*YAHIRV
Trigger: CACGCGTATGTGAGCATAGCATGTGTGAGTACTACA...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACCCTCGGGCTCCAGCTaGCATATTTTCTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPPSGSS*HIFSVS
Trigger: GGAGACCGAGAAAATATGCCAGCTGGAGCCCGAGGG...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCTCCTTCAGGCCCAGCTaGAGCTCGATGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIASFRPS*SSMWGS
Trigger: GGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGA...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCAGCAGCACCTGGGCGTaGCTCAGCTGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIASSTWA*LSCHCF
Trigger: GAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCAGCCTTCAGCCACAGTTaGAACTCGTCCACACCTGCC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPAFSHS*NSSTPA
Trigger: GGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGC...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACGCTCCAGGAGTGCCGTaGCTCTCTCCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNAPGVP*LSPGQR
Trigger: TCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGC...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGCCCCTTCTCGGCTTaGACCCTGACCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVSPFSA*TLTWRS
Trigger: GGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCT...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGCAGCTTCGATTTTCTaGTCCTCAAGTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQAASIF*SSSPQL
Trigger: CAGCTGAGGACTTGAGGACCAGAAAATCGAAGCTGC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTTTTTAAACACCCTCTaGGTGCTGCATGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLFLNTL*VLHVPF
Trigger: GAAAGGCACATGCAGCACCCAGAGGGTGTTTAAAAA...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCGCTCTTATCCTGTGCTaGGCATTGGGGGTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFALILC*ALGVWS
Trigger: ACTCCACACCCCCAATGCCCAGCACAGGATAAGAGC...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGCCCAGTGGGGAAAAGTaGGCTTCTCAGTTTGGCATT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQPSGEK*ASQFGI
Trigger: AATGCCAAACTGAGAAGCCCACTTTTCCCCACTGGG...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCCCCTTCTTCCTACCTaGAACCCAGATGAAAAATTG +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLPLLPT*NPDEKL
Trigger: CAATTTTTCATCTGGGTTCCAGGTAGGAAGAAGGGG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAAAACTCTGGCAAGCTaGGCAGATCTATTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLKTLAS*ADLFVG
Trigger: ACCGACAAATAGATCTGCCCAGCTTGCCAGAGTTTT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCTCGTTCCTCCAAAGCTaGTATTGGAAACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTRHSATFLSFLQS*YWKLAI
Trigger: AATGGCAAGTTTCCAATACCAGCTTTGGAGGAACGA...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp GGGCTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATTGGAGGGAAAACGTCCCCATGCCATTGCTTaGTCCACACTGCATGAAACA +
Preference number: 4 (lower is better)
Translates to: GLWNEGSGLSDLKLEGKRPHAIA*STLHET
Trigger: TGTTTCATGCAGTGTGGACCAAGCAATGGCATGGGG...ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AGTAAGGTGGTCGCCTGCAGAGAACGGCCCTATGGCTaGGTTTCCAGATATCTGGAGAAAAGTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKVVACRERPYG*VSRYLEKSVLS
Trigger: AGAAAGCACACTTTTCTCCAGATATCTGGAAACCAAGCCATAGGGCCGTTCTCTGCAGGCGACCACCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GCAAGCTGGGCAGATCTATTTGTCGGTTCCCAAGCCTaGCAGGAAGAATGTCTACAATGCCTTTGGGTAGAC +
Preference number: 4 (lower is better)
Translates to: ASWADLFVGSQA*QEECLQCLWVD
Trigger: GTCTACCCAAAGGCATTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHAPGRSR*SPFSAW
Trigger: CCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGG...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCCAACTCTGACAGCCTaGAGAATCCAGGTATCCTCC +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFPTLTA*RIQVSS
Trigger: GGAGGATACCTGGATTCTTCAGGCTGTCAGAGTTGG...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGTTTTAAGTCCTCTTTaGCTCTGGGCCTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQVLSPL*LWASAE
Trigger: TTCAGCAGAGGCCCAGAGTCAAAGAGGACTTAAAAC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTCCTTGTTTCTCCCATaGGAGGAATTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQSLFLP*EELELL
Trigger: GAGCAGTTCCAATTCCTCTCATGGGAGAAACAAGGA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAAAGGAAATTCCCAGATaGCACAGATCTAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRKEIPR*HRSKGS
Trigger: TGACCCCTTAGATCTGTGTCATCTGGGAATTTCCTT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCGTCCCCAGGGCAGCATaGCAAGAGGGCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAVPRAA*QEGFSH
Trigger: ATGGCTGAAGCCCTCTTGGCATGCTGCCCTGGGGAC...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCGTAGCGTCTCCAGTGTaGCACCAGCTCGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAVASPV*HQLVLG
Trigger: ACCGAGGACGAGCTGGTGGCACACTGGAGACGCTAC...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCG +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGRWKC*HSSTAA
Trigger: CGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATGTAGAAGTTCTCATTaGGATGATTCTAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTCRSSH*DDSNQL
Trigger: AAGCTGGTTAGAATCATCGCAATGAGAACTTCTACA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGTGCATTGGATTAAGATaGAAAGAGGCACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLCIGLR*KEAQGT
Trigger: AGTGCCCTGTGCCTCTTTGCATCTTAATCCAATGCA...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCAAAGCCTCAATTGTCTaGTACAAAACAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCKASIV*YKTKSW
Trigger: CCAGCTCTTTGTTTTGTAGCAGACAATTGAGGCTTT...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACAGCTGGAGCTCGATGTaGGGCTCCAGTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNSWSSM*GSSVTI
Trigger: GATGGTCACACTGGAGCCCCACATCGAGCTCCAGCT...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCGTGCAGCTGAGCACCTaGGCAGGAGTGATTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVVQLST*AGVIQA
Trigger: GGCCTGAATCACTCCTGCCCAGGTGCTCAGCTGCAC...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGGAAGATAATGATAGATaGCCCAAGGGAATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLEDNDR*PKGMCC
Trigger: GCAGCACATTCCCTTGGGCCATCTATCATTATCTTC...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGTTCCTCTGCCCGGTATaGTTCATAGTCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQFLCPV*FIVTMV
Trigger: CACCATTGTGACTATGAACCATACCGGGCAGAGGAA...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp ATTGCCTGGCTCTCCTTTAAGCAAAGGAGATTGCACTaGTGCTTGGAAGCACCAGTAACTGGGCTGTTACGT +
Preference number: 4 (lower is better)
Translates to: IAWLSFKQRRLH*CLEAPVTGLLR
Trigger: ACGTAACAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AGATGGGCAAAGTCAAGGGCAATGACTGCAATCCCGTaGGGCATCTTCAATGGCACAAACCCTTTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RWAKSRAMTAIP*GIFNGTNPFLR
Trigger: ACGAAGAAAAGGGTTTGTGCCATTGAAGATGCCCAACGGGATTGCAGTCATTGCCCTTGACTTTGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GAGAAAAGTAAAGTCTCTGACTGGTTTAAGCCAAAGTaGGTCGGGGGAGGAGGGATTCTGTTACTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: EKSKVSDWFKPK*VGGGGILLLVA
Trigger: AGCCACGAGTAACAGAATCCCTCCTCCCCCGACCAACTTTGGCTTAAACCAGTCAGAGACTTTACTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GCCTGGAAAGGCTCAGAGATCCTCATTTTCCAAGATTaGCACCCAGGAGCTCCTCAAGCTCAAGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: AWKGSEILIFQD*HPGAPQAQEEM
Trigger: CATTTCTTCTTGAGCTTGAGGAGCTCCTGGGTGCAAATCTTGGAAAATGAGGATCTCTGAGCCTTTCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTAGTGAGTCATGTAGGTaGCTGTCTCCTCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFSESCR*LSPPIG
Trigger: CCCAATGGGAGGAGACAGTCACCTACATGACTCACT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGTGGAGAGGCGCTGCGTaGTGGGCAGCTTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHAWRGAA*WAACSS
Trigger: GGAACTGCAAGCTGCCCATCACGCAGCGCCTCTCCA...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp GGTTCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTGGCTCCTTCCAGTTCTCCGGTaGTCTTCTCTGCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: GSVEVKGQISTKGLNFWLLPVLR*SSLHPK
Trigger: CTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAG...GAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACCCAAAGTCTTTGTGCTaGGCGAGCAGGCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNPKSLC*ASRLCS
Trigger: ACTGCAGAGCCTGCTCGCTCAGCACAAAGACTTTGG...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGAAGCAGAGGTTCTGTTaGGGTGAAAGGTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTKQRFC*GERSDL
Trigger: GAGATCTGACCTTTCACCTCAACAGAACCTCTGCTT...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGTGCTCCCGGGCCACCTaGTCCAGCAGATCTACACGC +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHACSRAT*SSRSTR
Trigger: GCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCA...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFSGDLL*TQRRGV
Trigger: AACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGA...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAATGGAACCTGCCACCTaGTCCAGGAGTGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKMEPAT*SRSAVA
Trigger: AGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCAT...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGTTAAGCAAAGGAGATTaGACTTGTGCTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLLSKGD*TCAWKH
Trigger: GTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAA...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ATCAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCATCATTGACCTGCAGCTaGTCCTGCACAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: IKFLIQPTMINGQPTYSPSLTCS*SCTAFI
Trigger: GATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGA...TGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTAGATCTACACGCTTCTaGGCCTTGGCCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFRSTRF*ALAFTA
Trigger: TGCAGTGAAGGCCAAGGCCCAGAAGCGTGTAGATCT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGAAATGGGTACAAAGTTaGAACAAGACAGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVKWVQS*NKTVYG
Trigger: TCCATAGACTGTCTTGTTCCAACTTTGTACCCATTT...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCATACAGCCAAGGCATaGAGGGTCAGGACAAACTCT +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFHTAKA*RVRTNS
Trigger: AGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATG...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACTTCACCTTCAGGCTCTaGTACTCCTGGATGGTAGCG +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNFTFRL*YSWMVA
Trigger: CGCTACCATCCAGGAGTATCAGAGCCTGAAGGTGAA...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGCAAGACTCAGTTGTTTaGGGTCAGGAACCATCAGAT +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTQDSVV*GQEPSD
Trigger: ATCTGATGGTTCCTGACCTCAAACAACTGAGTCTTG...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGTTATCCAGCCAACAATaGTCAACGGTCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQLSSQQ*STVSLL
Trigger: AAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAA...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCTGCCATTTCTACTTCTaGCACGTGGCAGCTACTCTT +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFCHFYF*HVAATL
Trigger: AAGAGTAGCTGCCACGTGTCAGAAGTAGAAATGGCA...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCTTGAGGGAAGGAACTTaGTGGAAGGATGGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: CLLQNKELAWKGSEILIFLREGT*WKDGES
Trigger: AGACTCTCCATCCTTCCATCAAGTTCCTTCCCTCAA...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAAGAAATAAGTTAAACTaGAGCAGCTTGAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRRNKLN*SSLREG
Trigger: TCCTTCCCTCAAGCTGCTTCAGTTTAACTTATTTCT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCAGCTGTGTTGTTCTGTaGCCCAGCACAGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIASCVVL*PSTAQH
Trigger: GTGTTGGGCTGTGCTGGGTCACAGAACAACACAGCT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGGTAGCGTCTCCAGTGTaGCACCAGCTCGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHAVASPV*HQLVLG
Trigger: ACCGAGGACGAGCTGGTGGCACACTGGAGACGCTAC...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVRGRWK*CHSSTA
Trigger: GGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCTGCAGGAGGCTGTTATaGAGCAGGTCTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIACRRLL*SRSLSL
Trigger: GAGGGACAGAGACCTGCTGCATAACAGCCTCCTGCA...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCTCCACCTGCAACCACTaGCCAAAGTTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIASTCNH*PKFLRS
Trigger: GCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGA...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGAAGAATGTCTACAATaGCTTTGGGTAGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQEECLQ*LWVDLK
Trigger: CTTCAGGTCTACCCAAAGGCATTGTAGACATTCTTC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCATCTTTTAGAACACTaGTACTTCCAACTTGCACAA +
Preference number: 4 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLHLLEH*YFQLAQ
Trigger: TTGTGCAAGTTGGAAGTAGCAGTGTTCTAAAAGATG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTTCCAGGAGCACCGCCTaGTTGTCCACGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVSRSTA*LSTLCS
Trigger: GCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGA...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCCACGCTTCTGGGCCTTaGCCTTCACTGCATCGTACT +
Preference number: 4 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVHASGP*PSLHRT
Trigger: AGTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTG...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTTCGTCCACACCTGCCTaGTACTCCTCATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVSSTPA*YSSCSR
Trigger: CCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGA...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTTCCTGCAGAGGCCGCTaGAAATGCTGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVSCRGR*KCCHSS
Trigger: GGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGA...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTAGCGGGCGAAGTTGTTaGCCAGGGTGCAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSGRSC*PGCSCG
Trigger: ACCGCAGCTGCACCCTGGCCAACAACTTCGCCCGCT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCCCTGGCCCCTGGCGTaGCAGATGCTTCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVPWPLA*QMLPFS
Trigger: TGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGAGGTGGCAGGCCGTaGTGGCAGGTCACTCTCACA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGGGRP*WQVTLT
Trigger: TGTGAGAGTGACCTGCCACCACGGCCTGCCACCTCC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AGAATAATTGCCTGGCTCTCCTTTAAGCAAAGGAGATaGCACTTGTGCTTGGAAGCACCAGTAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RIIAWLSFKQRR*HLCLEAPVTGL
Trigger: CAGCCCAGTTACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAAGGAGAGCCAGGCAATTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTTTGGAATGAGGGCTCTGGTCTTTCGGACTTGAAATaGGAGGGAAAACGTAATCGTTCCTCCAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LWNEGSGLSDLK*EGKRNRSSKAG
Trigger: ACCAGCTTTGGAGGAACGATTACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGAGCCCTCATTCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp GTGAACTTGTTTATGAGAACCTCGTTTATGCAGAGGTaGGACTCAAGGCGATCGCAGCACTCAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VNLFMRTSFMQR*DSRRSQHSIWC
Trigger: ACACCAGATTGAGTGCTGCGATCGCCTTGAGTCCAACCTCTGCATAAACGAGGTTCTCATAAACAAGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AACCGAGATAACACACACATGTTCCGAGACAGTCGTTaGGCTCCAATACTGCTTGCCTTCCCAGAAAGCTTA +
Preference number: 4 (lower is better)
Translates to: NRDNTHMFRDSR*APILLAFPESL
Trigger: TAAGCTTTCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTGTTATCTCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAATGTGAGGGAAGACGATaGGCTCCTTCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKCEGRR*APSAGL
Trigger: AAGCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACA...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGTCTATAATACCTTATaGTTCCAAAGCCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQVYNTL*FQSRTE
Trigger: TTCTGTCCGGCTTTGGAATCATAAGGTATTATAGAC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAAAGCTCAAGAAGAAATaGAAGCAAATATGCATTGCC +
Preference number: 4 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRKLKKK*KQICIA
Trigger: GGCAATGCATATTTGCTTTCATTTCTTCTTGAGCTT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGTCTCCCTGGCTTCTaGGAGACCACAGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGLPGF*ETTGWC
Trigger: ACACCAGCCTGTGGTCTCTCAGAAGCCAGGGAGACC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAGTCCCCAGGGCAGCATaGCAAGAGGGCTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MSSREHSQFMYELCLGFKVPRAA*QEGFSH
Trigger: ATGGCTGAAGCCCTCTTGGCATGCTGCCCTGGGGAC...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHASCLIC*SQAPLD
Trigger: GTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCT...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGCACAGCTGCAGATCCTaGAGAGGCCGCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHAHSCRS*RGRWKC
Trigger: GCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTG...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTGCTTTCCATCAGGGCTaGCTCGATCTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVAFHQG*LDLGQE
Trigger: TTCCTGCCCCAGATCGAGGCAGCCCTGATGGAAAGC...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTAGTTTGCTTTTCCTCTaGAGGAGGCTGTTATGCAGC +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFSLLFL*RRLLCS
Trigger: GCTGCATAACAGCCTCCTGCAGAGGAAAAGCAAACT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCCGGGGATCTGCTCTCTaGAGCTCTTCTTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIARGSAL*SSSFSP
Trigger: GGGAGAAAAAGAAGAGCTGCAGAGAGCAGATCCCCG...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFDTIRE*LQVVRE
Trigger: TTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTC...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTCCTGCAGAGGCCGCTaGAAATGCTGCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSCRGR*KCCHSS
Trigger: GGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTAAGGGTCTAAATTTCTaGCTCACGGCAGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFKGLNF*LTAAVA
Trigger: AGCAACAGCTGCCGTGAGCCAGAAATTTAGACCCTT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCCGGAGAGCAGGTGCTaGGAGATGCTGAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVPESRC*EMLSPA
Trigger: AGCAGGACTCAGCATCTCCCAGCACCTGCTCTCCGG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AACTCAAGTTGTTCCCTCGTATTGTTTCACTTGCCTTaGGTCAGTGAAAGCTTTGCCACTAGCGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NSSCSLVLFHLP*VSESFATSACP
Trigger: AGGACAAGCGCTAGTGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp CAAGTTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGAGTTTGTCATTTTGCTaGGCTCAAGACTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: QVPYPANNDQRSAYLQSTSLSFC*AQDSVV
Trigger: AACAACTGAGTCTTGAGCTCAGCAAAATGACAAACT...CGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGATAGCACAGGCTTTTTaGAAGTGTCATGACCATATT +
Preference number: 4 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQIAQAF*KCHDHI
Trigger: AATATGGTCATGACACTTTCAAAAAGCCTGTGCTAT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTGTGTTGTCATTGACCTaGAGCTGGTCCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVVLSLT*SWSCTA
Trigger: GGCTGTGCAGGACCAGCTGCAGGTCAATGACAACAC...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAAGGTACTCGCTCCAGTaGAGCCACACCCACTCGATG +
Preference number: 4 (lower is better)
Translates to: MSSREHSQFMYELCLGFKRYSLQ*SHTHSM
Trigger: CATCGAGTGGGTGTGGCTGCACTGGAGCGAGTACCT...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTCCTGGGCCAGCCTCTaGAGGACCATCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSWASL*RTILNS
Trigger: TGAGTTCAGGATGGTCCTGCAGAGGCTGGCCCAGGA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGGCTCCCGGCCTAAAATaGACTATTTTTAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQAPGLK*TIFNVF
Trigger: GAAGACATTAAAAATAGTGCATTTTAGGCCGGGAGC...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGCAGGCACTGGCAATTaGGTGATGAGGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVAGTGN*VMRATC
Trigger: ACAGGTGGCCCTCATCACCCAATTGCCAGTGCCTGC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCCTGGGACCTCATCCTaGTGTTGCCAGCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVPGTSS*CCQLPS
Trigger: TGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCTCCGAGACAGTCGTTTaGCTCCAATACTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIASETVV*LQYCLP
Trigger: AGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGA...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAACTCGTCCACACCTaGCTGGTACTCCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: MSSREHSQFMYELCLGFKELVHT*LVLLML
Trigger: GAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTC...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGAGAACTATTGTATCACGCGTCCAAGAGCTTCCTCTaGAGGGGCTCAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NLCMSCAWVLKRELLYHASKSFL*RGSKAA
Trigger: AGCAGCTTTTGAGCCCCTGCAGAGGAAGCTCTTGGA...CGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTGCCTTCATTCTCTTCTaGGCATCTTCGTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVAFILF*ASSSTL
Trigger: CAGCGTGGACGAAGATGCCCAGAAGAGAATGAAGGC...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CAA 72 bp GTCAACAATACCACAAAATCCCATTGGAGGGAGCCATaGCTAGGAATTTTCCCAACTCCAAATAGAACTCGT +
Preference number: 4 (lower is better)
Translates to: VNNTTKSHWREP*LGIFPTPNRTR
Trigger: ACGAGTTCTATTTGGAGTTGGGAAAATTCCTAGCAATGGCTCCCTCCAATGGGATTTTGTGGTATTGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTTTGGAGAAGAGGTTGCCATGAAAGTGACATGTTATaGTTCTTGCTTTCTAGGGTTGACTGCAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: LWRRGCHESDML*FLLSRVDCRPS
Trigger: ACTTGGTCTGCAGTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCTCCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AAGAAAAACTCAAGTTGTTCCCTCGTATTGTTTCACTaGCCTTTGGTCAGTGAAAGCTTTGCCACTAGCGCT +
Preference number: 4 (lower is better)
Translates to: KKNSSCSLVLFH*PLVSESFATSA
Trigger: AGCGCTAGTGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AAACGTAATCGTTCCTCCAAAGCTGGTATTGGAAACTaGCCATTTTCCCAACACACACACACAGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRNRSSKAGIGN*PFSQHTHTERE
Trigger: CTCTCTTTCTGTGTGTGTGTGTTGGGAAAATGGCAAGTTTCCAATACCAGCTTTGGAGGAACGATTACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAATCTCCTGGCCAAAGATaGCAATCAGGAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKSPGQR*QSGGLS
Trigger: AGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGA...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTCAGGGGCTCAAAAGCTaGTCCAAAGTCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVQGLKS*SKVFVL
Trigger: CAGCACAAAGACTTTGGAGCAGCTTTTGAGCCCCTG...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTCCAAGAGCTTCCTCTaGAGGGGCTCAAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSKSFL*RGSKAA
Trigger: AGCAGCTTTTGAGCCCCTGCAGAGGAAGCTCTTGGA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAACTGTCTCCTCCCATTaGGCCTTGATGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MSSREHSQFMYELCLGFKTVSSH*ALMSFS
Trigger: GCTGAAGGACATCAAGGCCCAATGGGAGGAGACAGT...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTCCCTGGGAAAATCTTTaGCAATGTCCTGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVPWENL*QCPAVW
Trigger: CCACACTGCAGGACATTGCCAAAGATTTTCCCAGGG...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CAA 72 bp AGAAGAGGTTGCCATGAAAGTGACATGTTATTGTTCTaGCTTTCTAGGGTTGACTGCAGACCAAGTCAACAA +
Preference number: 4 (lower is better)
Translates to: RRGCHESDMLLF*LSRVDCRPSQQ
Trigger: TTGTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGAACAATAACATGTCACTTTCATGGCAACCTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTACTCTTTGTGGTTGTTAAAACTAGACAAGCATACTaGTTCTCATTACGCATAAAGCAAGAGTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLFVVVKTRQAY*FSLRIKQESLG
Trigger: GCCCAGCGACTCTTGCTTTATGCGTAATGAGAACAAGTATGCTTGTCTAGTTTTAACAACCACAAAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp TCCTATGGAAAGAAAAACTCAAGTTGTTCCCTCGTATaGTTTCACTTGCCTTTGGTCAGTGAAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SYGKKNSSCSLV*FHLPLVSESFA
Trigger: GGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACAATACGAGGGAACAACTTGAGTTTTTCTTTCCATAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGAGGTTCTGTTGAGGTaGAAGGTCAGATCTCAACTA +
Preference number: 4 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKEVLLR*KVRSQL
Trigger: TAGTTGAGATCTGACCTTTCACCTCAACAGAACCTC...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR TCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTCAGCTTTCTCACCTGTaGCATAGGAAAGTGGACACC +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVQLSHL*HRKVDT
Trigger: GGTGTCCACTTTCCTATGTCACAGGTGAGAAAGCTG...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: MSSREHSQFMYELCLGFKETPRP*ENLWQC
Trigger: ACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTC...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCACCCAGATGAAAAATTaGAGGTACAGCAAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SSAWLLKRLETKVIRIIATQMKN*RYSKHP
Trigger: AGGATGCTTGCTGTACCTCCAATTTTTCATCTGGGT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTAACAAAGAGCTGGCCTaGAAAGGCTCAGAGATCCTC +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVNKELA*KGSEIL
Trigger: GAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR TCA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCCAAAGTTGGTTTAACTaGACACCTCTGGACTCATTA +
Preference number: 4 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVQSWFN*TPLDSL
Trigger: TAATGAGTCCAGAGGTGTTCAGTTAAACCAACTTTG...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTTTTATGTATGAGCTGTaGTTGGGTTTTAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFFMYEL*LGFKER
Trigger: TCTCTCTTTAAAACCCAAGCACAGCTCATACATAAA...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVDTIRE*LQVVRE
Trigger: TTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCAGGAACTGTATGAGCTGTGCTTaGGTTTTAAAGAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQLFEVRNCMSCA*VLKREL
Trigger: TAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACA...GTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
3UTR CAA 72 bp TTGCCATTTCTACTTCTGACACGTGGCAGCTACTCTTaGTGGTTGTTAAAACTAGACAAGCATACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPFLLLTRGSYS*WLLKLDKHTCS
Trigger: AGAACAAGTATGCTTGTCTAGTTTTAACAACCACAAAGAGTAGCTGCCACGTGTCAGAAGTAGAAATGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp AAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTaGTTTGAGGTCAGGAACCATCAGATAAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KTVCHFAELKTQ*FEVRNHQINKQ
Trigger: CTGCTTATTTATCTGATGGTTCCTGACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTAGCACCTTAAAGCTCTaGATGGCTGTTAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVSTLKL*MAVKEA
Trigger: AGCCTCTTTAACAGCCATGCAGAGCTTTAAGGTGCT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTAAAACTTCTGGAACATaGACAAGCGACTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVKTSGT*TSDCLL
Trigger: AAGGAGGCAGTCGCTTGTGCATGTTCCAGAAGTTTT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp TTTCTACTTCTGACACGTGGCAGCTACTCTTTGTGGTaGTTAAAACTAGACAAGCATACTTGTTCTCATTAC +
Preference number: 4 (lower is better)
Translates to: FLLLTRGSYSLW*LKLDKHTCSHY
Trigger: GTAATGAGAACAAGTATGCTTGTCTAGTTTTAACAACCACAAAGAGTAGCTGCCACGTGTCAGAAGTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp TCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTaGGGTTTTAAAGAGAGAACTATTGTATCACGCGCA +
Preference number: 4 (lower is better)
Translates to: SREHSQFMYELC*GFKERTIVSRA
Trigger: TGCGCGTGATACAATAGTTCTCTCTTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTTGTTTCACTTGCCTTTaGTCAGTGAAAGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVCFTCL*SVKALP
Trigger: TGGCAAAGCTTTCACTGACCAAAGGCAAGTGAAACA...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGGCAGCTACTCTTTGTaGTTGTTAAAACTAGACAAG +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVGSYSL*LLKLDK
Trigger: CTTGTCTAGTTTTAACAACCACAAAGAGTAGCTGCC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR GCA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTACATGTTATTGTTCTTaGTTTCTAGGGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVTCYCS*FLGLTA
Trigger: TGCAGTCAACCCTAGAAAGCAAGAACAATAACATGT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
3UTR CAA 72 bp CTCTTCTTCCATGAAATCACAAATTTCTCTAGATATTaGGAAACCAAGTCACAGGGTTGTAGGATCTACTTT +
Preference number: 4 (lower is better)
Translates to: LFFHEITNFSRY*ETKSQGCRIYF
Trigger: AAAGTAGATCCTACAACCCTGTGACTTGGTTTCCAAATATCTAGAGAAATTTGTGATTTCATGGAAGAAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp GCCAGGGCCTTCCACAGCTGCAGATCCTGCAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCCGCGGCATTGCGCAGCCTCGCGCTC +
Preference number: 5 (lower is better)
Translates to: ARAFHSCRSCRGRWK*CHSSTAAALRSLAL
Trigger: GAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAAGGCCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp ACCTCCAAGAGCCGCTGGGCCAGGGCCTTCCACAGCTGCAGATCCTaGAGAGGCCGCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCA +
Preference number: 5 (lower is better)
Translates to: TSKSRWARAFHSCRS*RGRWKCCHSSTAAA
Trigger: TGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAAGGCCCTGGCCCAGCGGCTCTTGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp AACAGGGAGGCTGCCTCCTCCAGCAGCCGGTCCAGGAGCACCGCCTaGTTGTCCACGTTGTGCAGCAGCACCTGGGCGTGGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NREAASSSSRSRSTA*LSTLCSSTWAWLSC
Trigger: GCAGCTGAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCGGCTGCTGGAGGAGGCAGCCTCCCTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTCCTTCAGCTGGGCTaGCAGCCGGTCCACCCGGGG +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLLQLG*QPVHPG
Trigger: CCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGAG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCGGCCATGGTGGCCAGTaGGGCTCTGGCCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAGHGGQ*GSGLAA
Trigger: GGCAGCAAGGCCAGAGCCCAACTGGCCACCATGGCC...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp AGGGCCTTCCACAGCTGCAGATCCTGCAGAGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCGGCATTGCGCAGCCTCGCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RAFHSCRSCRGRWKC*HSSTAAALRSLALF
Trigger: GAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAAGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp GCAGAGGCCGCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCACCTTCAGGCTGCAAGGAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: AEAAGNAATAPPPRH*AASRSSPSGCKERG
Trigger: TCCACGCTCCTTGCAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp CGGTCCAGGAGCACCGCCTGGTTGTCCACGTTGTGCAGCAGCACCTaGGCGTGGCTCAGCTGCCACTGCTTCTCCTTCAGGCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RSRSTAWLSTLCSST*AWLSCHCFSFRPSW
Trigger: CCAGCTGGGCCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCTCCTTCAGCTGGGCTaGCAGCCGGTCCACCCGGGG +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPLLQLG*QPVHPG
Trigger: CCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGAG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGAGCGGGCGAAGTTGTaGGCCAGGGTGCAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPERAKL*ARVQLR
Trigger: CCGCAGCTGCACCCTGGCCAACAACTTCGCCCGCTC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCCCCCAAGGGCTCTCCTaGGCAGCACGGGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAPQGLS*AARVSC
Trigger: GCAGGAAACCCGTGCTGCCAAGGAGAGCCCTTGGGG...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp TCCTCCAGCAGCCGGTCCAGGAGCACCGCCTGGTTGTCCACGTTGTaGAGCAGCACCTGGGCGTGGCTCAGCTGCCACTGCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSSSRSRSTAWLSTL*SSTWAWLSCHCFSF
Trigger: GAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCGGCTGCTGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp ACCATCCTGAACTCACTGAGCTCAGCCTCCAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGACCGGAGCAGGCCCCGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TILNSLSSASSCLIC*SQAPLDRSRPRSRS
Trigger: GGAGCGGCTGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGAGGCTGAGCTCAGTGAGTTCAGGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp AGGACCATCCTGAACTCACTGAGCTCAGCCTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTGGACCGGAGCAGGCCCCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RTILNSLSSASSCLI*CSQAPLDRSRPRSR
Trigger: GCGGCTGCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGAGGCTGAGCTCAGTGAGTTCAGGATGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TCCAGGGCCGCGCGGGGTCCCTGCGTGTTGTCATTGACCTGCAGCTaGTCCTGCACAGCCTTCATCCATGCCTGGGCATCCTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: SRAARGPCVLSLTCS*SCTAFIHAWASSTL
Trigger: GAGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACGCAGGGACCCCGCGCGGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp AGGAGCACCGCCTGGTTGTCCACGTTGTGCAGCAGCACCTGGGCGTaGCTCAGCTGCCACTGCTTCTCCTTCAGGCCCAGCTGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: RSTAWLSTLCSSTWA*LSCHCFSFRPSWSS
Trigger: CGAGCTCCAGCTGGGCCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GAGCAGGAACAGCAGGAGGAGGAACAGCAGCAGAAGCAGCTGCAGTaGGAGCGCCACACAGCACGCCCTCCGGAAGAGGGAGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: EQEQQEEEQQQKQLQ*ERHTARPPEEGAQS
Trigger: GGACTGGGCTCCCTCTTCCGGAGGGCGTGCTGTGTGGCGCTCCCACTGCAGCTGCTTCTGCTGCTGTTCCTCCTCCTGCTGTTCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCGTGATGGGCAGCTaGCAGTTCCGCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPCVMGS*QFRPRQ
Trigger: CTGCCTGGGGCGGAACTGCAAGCTGCCCATCACGCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTGCGTGATGGGCAGCTaGCAGTTCCGCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHCVMGS*QFRPRQ
Trigger: CTGCCTGGGGCGGAACTGCAAGCTGCCCATCACGCA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCAGCGCCGCCCGTGTaGCCGAGTAGCGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPAPPV*PSSVSS
Trigger: ACTGGAGACGCTACTCGGCAACACGGGCGGCGCTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTCCACCGCCGCGGCATaGCGCAGCCTCGCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESSTAAA*RSLALF
Trigger: GAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGAAGCCCCTTCTCGGCTaGGACCCTGACCTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWKPLLG*DPDLEV
Trigger: GACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCTGGACCAGAGGCCTaGCAGCCTCCATCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPGPEA*QPPSVP
Trigger: GGGCACAGATGGAGGCTGCAAGGCCTCTGGTCCAGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCTCAAACTCGGCCTCTaGGGACTCGGCATCCCCCGG +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHLKLGL*GLGIPR
Trigger: CCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGAG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCATCCGAGGTCCCCCTaGCTGGCCCGAGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALHPRSP*LARDEG
Trigger: TCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCATCCGAGGTCCCCCTaGCTGGCCCGAGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPHPRSP*LARDEG
Trigger: TCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGAGCGGGCGAAGTTGTaGGCCAGGGTGCAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKERAKL*ARVQLR
Trigger: CCGCAGCTGCACCCTGGCCAACAACTTCGCCCGCTC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS GCA 90 bp GCAGAGGCCGCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCACCTTCAGGCTCTGATACTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AEAAGNAATAPPPRH*AASRSSPSGSDTPG
Trigger: TCCAGGAGTATCAGAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CATTGGGCCTTGATGTCCTTCAGCCGGGCCAGGATCCCGGGCTTCTaGTCCCCAGGGCAGCATGCCAAGAGGGCTTCAGCCATCCGTAGC +
Preference number: 5 (lower is better)
Translates to: HWALMSFSRARIPGF*SPGQHAKRASAIRS
Trigger: GCTACGGATGGCTGAAGCCCTCTTGGCATGCTGCCCTGGGGACCAGAAGCCCGGGATCCTGGCCCGGCTGAAGGACATCAAGGCCCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCGGGGTCCCTGCGTGTaGTCATTGACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALRGPCV*SLTCSW
Trigger: CCAGCTGCAGGTCAATGACAACACGCAGGGACCCCG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTCCTCCCATTGGGCCTaGATGTCCTTCAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALSSHWA*MSFSRA
Trigger: GGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGGA...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTCCTCCCATTGGGCCTaGATGTCCTTCAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSSHWA*MSFSRA
Trigger: GGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGGA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCCTGGTTGTCCACGTaGTGCAGCAGCACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAWLST*CSSTWA
Trigger: CGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACAGGAGCACCGCCTGGTaGTCCACGTTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHRSTAW*STLCSS
Trigger: GCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGTCCCCGATCCTGTaGAACAGGGAGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPGSPIL*NREAAS
Trigger: GGAGGCAGCCTCCCTGTTCAACAGGATCGGGGACCC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCAAGCCCCTTCTCGGCTaGGACCCTGACCTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPKPLLG*DPDLEV
Trigger: GACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCTGGACCAGAGGCCTaGCAGCCTCCATCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPGPEA*QPPSVP
Trigger: GGGCACAGATGGAGGCTGCAAGGCCTCTGGTCCAGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCTCAAACTCGGCCTCTaGGGACTCGGCATCCCCCGG +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKLKLGL*GLGIPR
Trigger: CCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGAG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCACCGCCGAGTCTTTaGGAATCCAGTCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPPPSL*ESSRLP
Trigger: GGGGAGCCGACTGGATTCCAAAAGACTCGGCGGTGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAAGGAGCGGGCGAAGTaGTTGGCCAGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALKERAK*LARVQL
Trigger: CAGCTGCACCCTGGCCAACAACTTCGCCCGCTCCTT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCTGTCATTCTCCTaGGCCCCCAGGGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPCLSFS*APRVQR
Trigger: CCTCTGCACCCTGGGGGCCAAGGAGAATGACAGGCA...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp AGCCTCTGCAGGACCATCCTGAACTCACTGAGCTCAGCCTCCAGCTaGTTAATCTGCTGCTCCCAGGCTCCCCTGGACCGGAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SLCRTILNSLSSASS*LICCSQAPLDRSRP
Trigger: GGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGAGGCTGAGCTCAGTGAGTTCAGGATGGTCCTGCAGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CCCAGGCAGCCATTCACCTTCTCCACCACCGCCTTCAGCCACAGTTaGAACTCGTCCACACCTGCCTGGTACTCCTCATGCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PRQPFTFSTTAFSHS*NSSTPAWYSSCSRA
Trigger: GGCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCGGTGGTGGAGAAGGTGAATGGCTGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTGTGCCCCAGTGGGTTAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SLASILRRGPGTDGG*RRKSPVCPSGLGGW
Trigger: CCACCCACCTAACCCACTGGGGCACACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCCTGCGTGTTGTCATaGACCTGCAGCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPCVLS*TCSWSC
Trigger: GCAGGACCAGCTGCAGGTCAATGACAACACGCAGGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGAGGAGCACCGCCTGGTaGTCCACGTTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKRSTAW*STLCSS
Trigger: GCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCGCCTTCAGCCACAGTaGGAACTCGTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPRLQPQ*ELVHTC
Trigger: GCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACCGCCTTCAGCCACAGTaGGAACTCGTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHRLQPQ*ELVHTC
Trigger: GCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCG...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCACCGCCGAGTCTTTaGGAATCCAGTCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPPPSL*ESSRLP
Trigger: GGGGAGCCGACTGGATTCCAAAAGACTCGGCGGTGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGCCAGGGCTGCCCAGTaGTGCTTCTGCATGGAGATG +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPARAAQ*CFCMEM
Trigger: CATCTCCATGCAGAAGCACAACTGGGCAGCCCTGGC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp CCCTGCAACCTTGAGAGCTGGGCCTGTTTTCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGGACCCTGACCTGGAGGTCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: PCNLESWACFPGRSR*SPFSAWTLTWRSKS
Trigger: GCTCTTGGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGGAAAACAGGCCCAGCTCTCAAGGTTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 90 bp GCGTGGTCACAACGATCCACTGCCGCAGCTCCAGCAGCTGGTGGCTaGAGGTGCAGTGCTCCTGCACACTCTGCCGACACCTGTCCACAA +
Preference number: 5 (lower is better)
Translates to: AWSQRSTAAAPAAGG*RCSAPAHSADTCPQ
Trigger: TTGTGGACAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCACGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp AGTCCAGGGATGAGGCCTCCGCCAAGACCCTCAAGAGGCCCAGCATaGACTGCTCCCAGGGTGGGCCTTCTCCTGTTTCAGTTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPGMRPPPRPSRGPA*TAPRVGLLLFQLLG
Trigger: TCCCAGCAACTGAAACAGGAGAAGGCCCACCCTGGGAGCAGTGCATGCTGGGCCTCTTGAGGGTCTTGGCGGAGGCCTCATCCCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp CACCCGCAGACTGCTCCTCCAGCGTCTCCAGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGTCCTGCAGTGTGGAGAGGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: HPQTAPPASPETPRP*ENLWQCPAVWRGAA
Trigger: CGCAGCGCCTCTCCACACTGCAGGACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTCTGGAGACGCTGGAGGAGCAGTCTGCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GACTTCTCCATCACCAGCCAGCCCTGCGCTTCCACCAGGGACAGCTaGGCCTCCTTCTCCGGGAATTCTGCCACCAGCCTCTCAAACTCG +
Preference number: 5 (lower is better)
Translates to: DFSITSQPCASTRDS*ASFSGNSATSLSNS
Trigger: CGAGTTTGAGAGGCTGGTGGCAGAATTCCCGGAGAAGGAGGCCCAGCTGTCCCTGGTGGAAGCGCAGGGCTGGCTGGTGATGGAGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCCTGCGTGTTGTCATaGACCTGCAGCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPCVLS*TCSWSC
Trigger: GCAGGACCAGCTGCAGGTCAATGACAACACGCAGGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGACACGCTTCTGGGCCTaGGCCTTCACTGCATCGTAC +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALTRFWA*AFTASY
Trigger: GTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTGT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCTCCTTCAGCTGGGCTaGCAGCCGGTCCACCCGGGG +
Preference number: 5 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVLLQLG*QPVHPG
Trigger: CCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGAG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTCATCCGAGGTCCCCCTaGCTGGCCCGAGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVHPRSP*LARDEG
Trigger: TCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATG...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAAGGAGCGGGCGAAGTaGTTGGCCAGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESKERAK*LARVQL
Trigger: CAGCTGCACCCTGGCCAACAACTTCGCCCGCTCCTT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTGGCGCTCTTCCACGTaGCAGCTCAGAGGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHWRSST*QLRGLS
Trigger: TGAAAGGCCTCTGAGCTGCAACGTGGAAGAGCGCCA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCGGTGGGAGTCAACGGACTTCCCCGCAGGAGTGGGCACAGGAGGAAAGCAGCATCCTGTGCTGGGCATaGGGGGTGTGGAGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SGGSQRTSPQEWAQEESSILCWA*GVWSSV
Trigger: GACAGAACTCCACACCCCCAATGCCCAGCACAGGAT...GCTGCTTTCCTCCTGTGCCCACTCCTGCGGGGAAGTCCGTTGACTCCCACCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp ACCTGCAACCTTGAGAGCTGGGCCTGTTTTCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGGACCCTGACCTGGAGGTCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: TCNLESWACFPGRSR*SPFSAWTLTWRSKS
Trigger: GCTCTTGGACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGGAAAACAGGCCCAGCTCTCAAGGTTGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS GCA 90 bp AACTCGTCCACACCTGCCTGGTACTCCTCATGCTCCCGGGCCACCTaGTCCAGCAGATCTACACGCTTCTGGGCCTTGGCCTTCACTGCA +
Preference number: 5 (lower is better)
Translates to: NSSTPAWYSSCSRAT*SSRSTRFWALAFTA
Trigger: TGCAGTGAAGGCCAAGGCCCAGAAGCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp TTCAGCCACAGTTGGAACTCGTCCACACCTGCCTGGTACTCCTCATaGTCCCGGGCCACCTGCTCCAGCAGATCTACACGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FSHSWNSSTPAWYSS*SRATCSSRSTRFWA
Trigger: GGCCCAGAAGCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp GACCTCTGCAGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTaGTGGTGGTTGGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: DLCRAWKSEESWSIL*WWLGFSWTRGLAAS
Trigger: GGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp AGGGATGAGGCCTCCGCCAAGACCCTCAAGAGGCCCAGCATGCACTaGTCCCAGGGTGGGCCTTCTCCTGTTTCAGTTGCTGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: RDEASAKTLKRPSMH*SQGGPSPVSVAGNV
Trigger: GACATTCCCAGCAACTGAAACAGGAGAAGGCCCACCCTGGGAGCAGTGCATGCTGGGCCTCTTGAGGGTCTTGGCGGAGGCCTCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp ACCTGGGCGTGGCTCAGCTGCCACTGCTTCTCCTTCAGGCCCAGCTaGAGCTCGATGTGGGGCTCCAGTGTGACCATCATCTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TWAWLSCHCFSFRPS*SSMWGSSVTIIFWN
Trigger: GTTCCAGAAGATGATGGTCACACTGGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGAGAAGCAGTGGCAGCTGAGCCACGCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTGGTTaGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCCATCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: GPGSRRKAGPFCAGG*GSPGPEALQPPSVP
Trigger: GGGCACAGATGGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TTTTGCGTGGTCACAACGATCCACTGCCGCAGCTCCAGCAGCTGGTaGCTGAAGGTGCAGTGCTCCTGCACACTCTGCCGACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: FCVVTTIHCRSSSSW*LKVQCSCTLCRHLS
Trigger: GGACAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCACGCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp AGCTTTTGCGTGGTCACAACGATCCACTGCCGCAGCTCCAGCAGCTaGTGGCTGAAGGTGCAGTGCTCCTGCACACTCTGCCGACACCTG +
Preference number: 5 (lower is better)
Translates to: SFCVVTTIHCRSSSS*WLKVQCSCTLCRHL
Trigger: CAGGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCACGCAAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GGTTGGAGGAGAAAGTCACCTGTGTGCCCCAGTGGGTTAGGTGGGTaGTGGGCCATTGTAGCGCAGCATGAGCGTGAAGGAGCGGGCGAA +
Preference number: 5 (lower is better)
Translates to: GWRRKSPVCPSGLGG*WAIVAQHEREGAGE
Trigger: TTCGCCCGCTCCTTCACGCTCATGCTGCGCTACAATGGCCCACCACCCACCTAACCCACTGGGGCACACAGGTGACTTTCTCCTCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCTCCCCTGGAGAACTTaGTGTCAGCAGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPLPWRT*CQQVAR
Trigger: TCTGGCCACCTGCTGACACAAAGTTCTCCAGGGGAG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCTCCCCTGGAGAACTTaGTGTCAGCAGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKLPWRT*CQQVAR
Trigger: TCTGGCCACCTGCTGACACAAAGTTCTCCAGGGGAG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACAAGCAGGAGAATCGCTaGAATCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHKQENR*NLGGGG
Trigger: ACCTCCGCCTCCCAGATTCAAGCGATTCTCCTGCTT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCCCTCATTGCCCCATGTaGTGGGTTTGGACCCACTTC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPPHCPM*WVWTHF
Trigger: GAAGTGGGTCCAAACCCACAACATGGGGCAATGAGG...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCTGGGTCAGGTCATCCTaGACCCATTTCCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAWVRSS*THFLWK
Trigger: CTTCCAGAGGAAATGGGTCAAGGATGACCTGACCCA...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCAGTGTCATGACCATATaGCAGGCGCTCGGGGTATGT +
Preference number: 5 (lower is better)
Translates to: HGAQLAYTWLERAWFWVASVMTI*QALGVC
Trigger: ACATACCCCGAGCGCCTGCAATATGGTCATGACACT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp CGTGTTGTCATTGACCTGCAGCTGGTCCTGCACAGCCTTCATCCATaGCTGGGCATCCTCCACGCTCCTGTCAAAGTCGTCCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RVVIDLQLVLHSLHP*LGILHAPVKVVLGL
Trigger: CAGCCCCAGGACGACTTTGACAGGAGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CTCTGCAGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTaGTGGTTGGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: LCRAWKSEESWSILC*WLGFSWTRGLAASI
Trigger: GATGGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TGGAGGAGAAAGTCACCTGTGTGCCCCAGTGGGTTAGGTGGGTGGTaGGCCATTGTAGCGCAGCATGAGCGTGAAGGAGCGGGCGAAGTT +
Preference number: 5 (lower is better)
Translates to: WRRKSPVCPSGLGGW*AIVAQHEREGAGEV
Trigger: AACTTCGCCCGCTCCTTCACGCTCATGCTGCGCTACAATGGCCCACCACCCACCTAACCCACTGGGGCACACAGGTGACTTTCTCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GTTACTGCTAGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCTaGGCAGGAGTGATTCAGGCCTCACAGACCCCTCACCTGCAACCT +
Preference number: 5 (lower is better)
Translates to: VTARGRRCFQVQLST*AGVIQASQTPHLQP
Trigger: AGGTTGCAGGTGAGGGGTCTGTGAGGCCTGAATCACTCCTGCCCAGGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCTAGCAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCACACGCTTCTGGGCCTaGGCCTTCACTGCATCGTAC +
Preference number: 5 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGTRFWA*AFTASY
Trigger: GTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTGT...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTTCCACCGCCGCGGCATaGCGCAGCCTCGCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVSTAAA*RSLALF
Trigger: GAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGA...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGATTTTGTGCTGGTGGTaGGGGTTCTCCTGGACCAGA +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALILCWW*GFSWTR
Trigger: TCTGGTCCAGGAGAACCCCAACCACCAGCACAAAAT...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGAAAGCTGGTCCATTTaGTGCTGGTGGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPESWSI*CWWLGF
Trigger: GAACCCCAACCACCAGCACAAAATGGACCAGCTTTC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGTGTGCCTCCAGCTTTaGCGTGGTCACAACGATCCA +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPVCLQL*RGHNDP
Trigger: TGGATCGTTGTGACCACGCAAAAGCTGGAGGCACAC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCCAGAGTCCTTCAGCTaGGACTTGTACAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALPESFS*DLYSIH
Trigger: GTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTGG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCCTCCCCTGGAGAACTTaGTGTCAGCAGGTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ASVSERKPRILGGNRGPSLPWRT*CQQVAR
Trigger: TCTGGCCACCTGCTGACACAAAGTTCTCCAGGGGAG...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCAGTTGGGCTCTGGCCTaGCTGCCTCTCACTGTGTGG +
Preference number: 5 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLSWALA*LPLTVW
Trigger: CCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGCTGGGCAGATCTATTaGTCGGTTCCCAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKAGQIY*SVPKPC
Trigger: GCAAGGCTTGGGAACCGACAAATAGATCTGCCCAGC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGCCTGGTGTTCCTGGTaGCTGAGCTCAGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESAWCSW*LSSEAS
Trigger: GCTTGCTTCTGAGCTCAGCAACCAGGAACACCAGGC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp GCTTCTCCTTCAGGCCCAGCTGGAGCTCGATGTGGGGCTCCAGTGTaGCCATCATCTTCTGGAACCAGCGGTAGAACTCATCTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: ASPSGPAGARCGAPV*PSSSGTSGRTHLGP
Trigger: TGGCCCGAGATGAGTTCTACCGCTGGTTCCAGAAGATGATGGTCACACTGGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 90 bp GACACTCTCTTCCCTGCAGGAGCTGCTGCTAGTGGCTCACAGAGGTaGGTATCTGACTGGCTAAGGGATACCCCTACTGCCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: DTLFPAGAAASGSQR*VSDWLRDTPTALVA
Trigger: GGCCACCAGGGCAGTAGGGGTATCCCTTAGCCAGTCAGATACTCACCTCTGTGAGCCACTAGCAGCAGCTCCTGCAGGGAAGAGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 90 bp CTGCCACCTGCTCCAGGAGTGCCGTGGCTCTCTCCTGGCCAAAGATaGCAATCAGGAGGTCTTTCTTCAGCTGCAGCATCGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LPPAPGVPWLSPGQR*QSGGLSSAAASSAA
Trigger: AGCTGCTGACGATGCTGCAGCTGAAGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp CAGCAGGTCTCTGTCCCTCATGGAACCTGCCACCTGCTCCAGGAGTaGCGTGGCTCTCTCCTGGCCAAAGATGCCAATCAGGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: QQVSVPHGTCHLLQE*RGSLLAKDANQEVF
Trigger: AAAGACCTCCTGATTGGCATCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCATGAGGGACAGAGACCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp AGGCTGTTATGCAGCAGGTCTCTGTCCCTCATGGAACCTGCCACCTaGTCCAGGAGTGCCGTGGCTCTCTCCTGGCCAAAGATGCCAATC +
Preference number: 5 (lower is better)
Translates to: RLLCSRSLSLMEPAT*SRSAVALSWPKMPI
Trigger: GATTGGCATCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCATGAGGGACAGAGACCTGCTGCATAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TGCAGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTaGTTGGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCCATCTGT +
Preference number: 5 (lower is better)
Translates to: CRAWKSEESWSILCW*LGFSWTRGLAASIC
Trigger: ACAGATGGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CCACTGGTAGCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTTGCTaGCCCGAGACGAAGGAGGTTCTCAAAGAGATGCTGACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PLVAQIFQLIRGPPC*PETKEVLKEMLTFW
Trigger: CCAGAAGGTCAGCATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGCTACCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGACTGTCTCCTCCCATaGGGCCTTGATGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESDCLLP*GLDVLQ
Trigger: CTGAAGGACATCAAGGCCCAATGGGAGGAGACAGTC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGGCCTGGTTGTCCACGTaGTGCAGCAGCACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLAWLST*CSSTWA
Trigger: CGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGC...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATGGGTCCCCGATCCTGTaGAACAGGGAGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHGSPIL*NREAAS
Trigger: GGAGGCAGCCTCCCTGTTCAACAGGATCGGGGACCC...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTCCAGCGCCGCCCGTGTaGCCGAGTAGCGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVPAPPV*PSSVSS
Trigger: ACTGGAGACGCTACTCGGCAACACGGGCGGCGCTGG...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGCCTGGACCAGAGGCCTaGCAGCCTCCATCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLPGPEA*QPPSVP
Trigger: GGGCACAGATGGAGGCTGCAAGGCCTCTGGTCCAGG...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATTTTGTGCTGGTGGTaGGGGTTCTCCTGGACCAGA +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPILCWW*GFSWTR
Trigger: TCTGGTCCAGGAGAACCCCAACCACCAGCACAAAAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGAAAGCTGGTCCATTTaGTGCTGGTGGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPESWSI*CWWLGF
Trigger: GAACCCCAACCACCAGCACAAAATGGACCAGCTTTC...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGTGTGCCTCCAGCTTTaGCGTGGTCACAACGATCCA +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESVCLQL*RGHNDP
Trigger: TGGATCGTTGTGACCACGCAAAAGCTGGAGGCACAC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCCAGAGTCCTTCAGCTaGGACTTGTACAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPPESFS*DLYSIH
Trigger: GTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTGG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAACTGGACATCTGGGCTaGGCTGCCTGGGCTCACTCA +
Preference number: 5 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTTGHLG*AAWAHS
Trigger: TGAGTGAGCCCAGGCAGCCAAGCCCAGATGTCCAGT...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CATGGAGCCCAGCTCGCCTACACCTGGCTGGAGAGGGCCTGGTTTTGGGTGGCCAAACGAGCACATTCTTaGTCTCCCTTGTCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: HGAQLAYTWLERAWFWVAKRAHS*SPLSVF
Trigger: GAACACCGACAAGGGAGACAAAGAATGTGCTCGTTT...GGCCACCCAAAACCAGGCCCTCTCCAGCCAGGTGTAGGCGAGCTGGGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TCTGTGACAGTGGGCCTGCCCCCTCTGGAAAGGCAGATGGGCAAAGTCAAGGGCCCCCATGTTGTGGGTTaGGACCCACTTCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: SVTVGLPPLERQMGKVKGPHVVG*DPLQHE
Trigger: CTCATGCTGAAGTGGGTCCAAACCCACAACATGGGG...GCCCTTGACTTTGCCCATCTGCCTTTCCAGAGGGGGCAGGCCCACTGTCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCGCCTTAAGCCTCCCCTaGAAGCCTCCAGGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCALSLP*KPPGAS
Trigger: GGAGGCTCCTGGAGGCTTCAAGGGGAGGCTTAAGGC...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp AAGCCCGCCTTCTGGAGATGGGGAAATGTGGGTTCCAGCACACCCTaGGTCCCACCACCCTTGGCCTTCCCAGATACCTCTGATACTCCT +
Preference number: 5 (lower is better)
Translates to: KPAFWRWGNVGSSTP*VPPPLAFPDTSDTP
Trigger: AGGAGTATCAGAGGTATCTGGGAAGGCCAAGGGTGGTGGGACTCAGGGTGTGCTGGAACCCACATTTCCCCATCTCCAGAAGGCGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 90 bp ACCCCTACTGCCCTGGTGGCCTGGCTCTGCAGACTCTGGGATCTCTaGGGTCCTCTGTGGAGTAGGATCAAATGCTCTTTGGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: TPTALVAWLCRLWDL*GPLWSRIKCSLATA
Trigger: AGCTGTGGCCAAAGAGCATTTGATCCTACTCCACAGAGGACCTCAGAGATCCCAGAGTCTGCAGAGCCAGGCCACCAGGGCAGTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 90 bp CATCCACTGGTAGCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTTaGTGGCCCGAGACGAAGGAGGTTCTCAAAGAGATGCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: HPLVAQIFQLIRGPP*WPETKEVLKEMLTF
Trigger: GAAGGTCAGCATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGCTACCAGTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TGGGCCTTGGCCTTCACTGCATCGTACTCAGCCTTCATTCTCTTCTaGGCATCTTCGTCCACGCTGGGGTCCCCGATCCTGTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: WALAFTASYSAFILF*ASSSTLGSPILLNR
Trigger: CCTGTTCAACAGGATCGGGGACCCCAGCGTGGACGAAGATGCCCAGAAGAGAATGAAGGCTGAGTACGATGCAGTGAAGGCCAAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CTCATGGAACCTGCCACCTGCTCCAGGAGTGCCGTGGCTCTCTCCTaGCCAAAGATGCCAATCAGGAGGTCTTTCTTCAGCTGCAGCATC +
Preference number: 5 (lower is better)
Translates to: LMEPATCSRSAVALS*PKMPIRRSFFSCSI
Trigger: GATGCTGCAGCTGAAGAAAGACCTCCTGATTGGCATCTTTGGCCAGGAGAGAGCCACGGCACTCCTGGAGCAGGTGGCAGGTTCCATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCCCTGGGAAAATCTTaGGCAATGTCCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESPLGKS*AMSCSV
Trigger: CACACTGCAGGACATTGCCAAAGATTTTCCCAGGGG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGAAAGCTGGTCCATTTaGTGCTGGTGGTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ASVSERKPRILGGNRGPSESWSI*CWWLGF
Trigger: GAACCCCAACCACCAGCACAAAATGGACCAGCTTTC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCATTGGAGGGAGCCATaGCTAGGAATTTTCCCAACT +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALHWREP*LGIFPT
Trigger: AGTTGGGAAAATTCCTAGCAATGGCTCCCTCCAATG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334258.9
ENST00000557275.5
CDS-3UTR CAA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACGCGGAAGGAGAGCCCTaGAGACAGGCTGAACTCCAA +
Preference number: 5 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENAEGEP*RQAELQ
Trigger: TTGGAGTTCAGCCTGTCTCAAGGGCTCTCCTTCCGC...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTGGAGAGGGCCTGGTTTaGGGTGGCCTGGGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVGEGLV*GGLGPS
Trigger: ACTAGGGCCCAGGCCACCCAAAACCAGGCCCTCTCC...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp GCAAGCGTTTCAGAAAGGAAGCCCAGGATCCTCGGGGGAAACCGAGGTCCCTCCGCCACCGGTCCCAGTTaGCCAGCTGTAAAATCCATT +
Preference number: 5 (lower is better)
Translates to: ASVSERKPRILGGNRGPSATGPS*PAVKSI
Trigger: AATGGATTTTACAGCTGGCAAACTGGGACCGGTGGC...GGAGGGACCTCGGTTTCCCCCGAGGATCCTGGGCTTCCTTTCTGAAACGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACAGTGGGCTTCTCAGTTaGGCATTTCCAACCACACAT +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHSGLLS*AFPTTH
Trigger: ATGTGTGGTTGGAAATGCCAAACTGAGAAGCCCACT...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTCCCGTCCCCTGGGACCTCATCCTGGTGTTGCCAGCTCCCTTCAGCGGTGGATTTTGATGTCTGTCTaGGAAGCAGCAAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: CSRPLGPHPGVASSLQRWILMSV*EAARAV
Trigger: TACAGCCCTTGCTGCTTCCAAGACAGACATCAAAAT...CCACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTCCCAGGGGACGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp TCCTGGATGGTAGCGATGACACTATCAGAGAGTGGCTTCAGGTTGTaGGGGAAGACGATGAGCTCCTTCAGCTGGGCTTGCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: SWMVAMTLSESGFRL*GKTMSSFSWACSRS
Trigger: GGACCGGCTGCAAGCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTCATCGCTACCATCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp GATGGGGAAATGTGGGTTCCAGCACACCCTGAGTCCCACCACCCTTaGCCTTCCCAGATACCTCTGATACTCCTGGATGGTAGCGATGAC +
Preference number: 5 (lower is better)
Translates to: DGEMWVPAHPESHHP*PSQIPLILLDGSDD
Trigger: GTCATCGCTACCATCCAGGAGTATCAGAGGTATCTGGGAAGGCCAAGGGTGGTGGGACTCAGGGTGTGCTGGAACCCACATTTCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp GAGCTCCCTGTACCAGGCAGAGGTAGGAGATGCACGACAGCTGCGTaGACAGTTGTACCATGTTCAGAACACCTCGGAGGCTCATGCAGT +
Preference number: 5 (lower is better)
Translates to: ELPVPGRGRRCTTAA*TVVPCSEHLGGSCS
Trigger: ACTGCATGAGCCTCCGAGGTGTTCTGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGCCTGGTACAGGGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCATGATTCTAACCAGCTaGGAGTTTTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPMILTS*EFSTCN
Trigger: GTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCAT...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTCAAAGGAGATTGCACTaGTGCTTGGAAGCACCAGTA +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPQRRLH*CLEAPV
Trigger: TACTGGTGCTTCCAAGCACAAGTGCAATCTCCTTTG...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGGGGGAGTGGGAAAGGTaGGTGATCAACTATTTTGAT +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALGEWER*VINYFD
Trigger: ATCAAAATAGTTGATCACCAACCTTTCCCACTCCCC...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATTGCAGGCACTGGCAATaGGGTGATGAGGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHCRHWQ*GDEGHL
Trigger: CAGGTGGCCCTCATCACCCAATTGCCAGTGCCTGCA...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATCCTGCTGAACCATTaGCTTTTAGACCACGAGCCT +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPILLNH*LLDHEP
Trigger: AGGCTCGTGGTCTAAAAGCAAATGGTTCAGCAGGAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp GAAGCTGGGATCGCAAAGGTCCATGCCCTCAGGATAAAAGTGCACTaGAAGCAAGCCAGTCCAACAGACGGATGGCCCAGCTTCATGACC +
Preference number: 5 (lower is better)
Translates to: EAGIAKVHALRIKVH*KQASPTDGWPSFMT
Trigger: GGTCATGAAGCTGGGCCATCCGTCTGTTGGACTGGCTTGCTTGCAGTGCACTTTTATCCTGAGGGCATGGACCTTTGCGATCCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp TCTGGGATCTCTGAGGTCCTCTGTGGAGTAGGATCAAATGCTCTTTaGCCACAGCTGGGGCAGGCTCAAATGAGACAGGACGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SGISEVLCGVGSNAL*PQLGQAQMRQDVAK
Trigger: CTTGGCCACGTCCTGTCTCATTTGAGCCTGCCCCAGCTGTGGCCAAAGAGCATTTGATCCTACTCCACAGAGGACCTCAGAGATCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGGACTGTCTCCTCCCATaGGGCCTTGATGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVDCLLP*GLDVLQ
Trigger: CTGAAGGACATCAAGGCCCAATGGGAGGAGACAGTC...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTCTCCTTCAGCTGGGCTaGCAGCCGGTCCACCCGGGG +
Preference number: 5 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFLLQLG*QPVHPG
Trigger: CCCCGGGTGGACCGGCTGCAAGCCCAGCTGAAGGAG...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGATGATTCTAACCAGCTaGGAGTTTTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKMILTS*EFSTCN
Trigger: GTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCAT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCCTGGACCCTCGATCCCTGGCCCCTGGCGTGGCAGATGCTTCCCTTCTCACTTTAAGCAAAGGAGATaGCACTTGTGCTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: CPGPSIPGPWRGRCFPSHFKQRR*HLCLEA
Trigger: TGCTTCCAAGCACAAGTGCAATCTCCTTTGCTTAAA...GTGAGAAGGGAAGCATCTGCCACGCCAGGGGCCAGGGATCGAGGGTCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATGAGAGTTCTGCCTGCTaGCCCAGGGAACTCCATTCC +
Preference number: 5 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHESSAC*PRELHS
Trigger: GGAATGGAGTTCCCTGGGCAAGCAGGCAGAACTCTC...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGGCAAGAGATTATCCTaGAGCATGGACACGCCAACC +
Preference number: 5 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTGKRLS*SMDTPT
Trigger: GGTTGGCGTGTCCATGCTCAAGGATAATCTCTTGCC...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATGGTTTAAGCCAAAGTaGGTCGGGGGAGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTWFKPK*VGGGGI
Trigger: AATCCCTCCTCCCCCGACCAACTTTGGCTTAAACCA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTAACCCAGATGAAAAATaGGAGGTACAGCAAGCATCC +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPNPDEK*EVQQAS
Trigger: GGATGCTTGCTGTACCTCCAATTTTTCATCTGGGTT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTCCTCCAAAGCTGGTATaGGAAACTTGCCATTTTCCC +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESPPKLV*ETCHFP
Trigger: GGGAAAATGGCAAGTTTCCAATACCAGCTTTGGAGG...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACTTCCGAGACAGTCGTTaGGCTCCAATACTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENFRDSR*APILLA
Trigger: GGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAA...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTAGGAGAAAGTCTCTGTaGGGTGCTTCTGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESRRKSL*GASVLN
Trigger: GTTCAAGACAGAAGCACCCAACAGAGACTTTCTCCT...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS CCA 90 bp CAGGCTCTGATACTCCTGGATGGTAGCGATGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAAGACGATGAGCTCCTTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QALILLDGSDDTIRE*LQVVREDDELLQLG
Trigger: GCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTCATCGCTACCATCCAGGAGTATCAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp CCAGGCCACTGCCCCAGTTTTATAGATGTAGGCCTGAGCACGCTGTaGGATGAGAGCCACACAGCAAAGGTAGGAGCTCCCTTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PGHCPSFIDVGLSTL*DESHTAKVGAPFVH
Trigger: ATGAACAAAGGGAGCTCCTACCTTTGCTGTGTGGCTCTCATCCCACAGCGTGCTCAGGCCTACATCTATAAAACTGGGGCAGTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTCCAGCGCCGCCCGTGTaGCCGAGTAGCGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFPAPPV*PSSVSS
Trigger: ACTGGAGACGCTACTCGGCAACACGGGCGGCGCTGG...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCGTGTGCCTCCAGCTTTaGCGTGGTCACAACGATCCA +
Preference number: 5 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSVCLQL*RGHNDP
Trigger: TGGATCGTTGTGACCACGCAAAAGCTGGAGGCACAC...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCGACTTTGGGATGTTGTaGGTGAAAACCATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LCPAPVSSFPGEHPQEGPDFGML*VKTIFF
Trigger: GAAGAAAATGGTTTTCACCAACAACATCCCAAAGTC...GGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGCCTGACTTTGGGATGTaGTTGGTGAAAACCATTTTC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKPDFGM*LVKTIF
Trigger: GAAAATGGTTTTCACCAACAACATCCCAAAGTCAGG...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp GCCTGGGCTCACTCAGCTCCTGATTTTCCAGTAAGGTGGTCGCCTGCAGAGAACTACCACAAAATCCCATaGGAGGGAGCCATTGCTAGG +
Preference number: 5 (lower is better)
Translates to: AWAHSAPDFPVRWSPAENYHKIP*EGAIAR
Trigger: CCTAGCAATGGCTCCCTCCAATGGGATTTTGTGGTA...GTTCTCTGCAGGCGACCACCTTACTGGAAAATCAGGAGCTGAGTGAGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGAACGGCCCTATGGCTaGGTTTCCAGATATCTGGAG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTRHSATFLERPYG*VSRYLE
Trigger: CTCCAGATATCTGGAAACCAAGCCATAGGGCCGTTC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCCTCCTTGACCCACTTCCTCTGCCCGGTATGGTTCATAGTCACAATGGTGCATTCTTTGTCTCCCTaGTCGGTGTTCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: LASLTHFLCPVWFIVTMVHSLSP*SVFPLS
Trigger: GGACAGAGGGAACACCGACAAGGGAGACAAAGAATG...CACCATTGTGACTATGAACCATACCGGGCAGAGGAAGTGGGTCAAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCCACTTCCCCGTCCGCCCTCTCCAGCCAGACCACCATAAAGTGCAGTTCCTCACTTTCTGGGGCTAGTTaGTCTCACCCAATTACTAGA +
Preference number: 5 (lower is better)
Translates to: PTSPSALSSQTTIKCSSSLSGAS*SHPITR
Trigger: TCTAGTAATTGGGTGAGACAAACTAGCCCCAGAAAG...TGAGGAACTGCACTTTATGGTGGTCTGGCTGGAGAGGGCGGACGGGGAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCTCATTTTCCAAGATTaGCACCCAGGAGCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLLIFQD*HPGAPQ
Trigger: TTGAGGAGCTCCTGGGTGCAAATCTTGGAAAATGAG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CAGACACACACACACACACACACACACCCCATGCCATTGCTTGGTCCACACTGCTCGTTTATGCAGAGGTaGGACTCAAGGCGATCGCAG +
Preference number: 5 (lower is better)
Translates to: QTHTHTHTHPMPLLGPHCSFMQR*DSRRSQ
Trigger: CTGCGATCGCCTTGAGTCCAACCTCTGCATAAACGA...GCAGTGTGGACCAAGCAATGGCATGGGGTGTGTGTGTGTGTGTGTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp CTCCAGAACTTTCCTCATCTCTTCCAGTTCTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTTCCGAATGACACCCGCAGACTGCTC +
Preference number: 5 (lower is better)
Translates to: LQNFPHLFQFSGDLL*TQRRGVPNDTRRLL
Trigger: GAGCAGTCTGCGGGTGTCATTCGGAACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAGAGATGAGGAAAGTTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 90 bp TTGGAGTTTTCCACCTGCAACCACTGCCCAAAGTTCCTCAGGAGCTaGGAGAAATCTTCATGGCTCCCTTCTTCTTCGCGTCGACGATGC +
Preference number: 5 (lower is better)
Translates to: LEFSTCNHCPKFLRS*EKSSWLPSSSRRRC
Trigger: GCATCGTCGACGCGAAGAAGAAGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp GGTTCTGTTGAGGTGAAAGGTCAGATCTCAACTAAGGGTCTAAATTTCTGGCTCGCCTGGTTGTCCACGTaGTGCAGCAGCACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GSVEVKGQISTKGLNFWLAWLST*CSSTWA
Trigger: CGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGC...GAGCCAGAAATTTAGACCCTTAGTTGAGATCTGACCTTTCACCTCAACAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGGACTTTGGGATGTTGTaGGTGAAAACCATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKDFGML*VKTIFF
Trigger: GAAGAAAATGGTTTTCACCAACAACATCCCAAAGTC...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTATAGGATCCATGGGATaGATGAGAAATCCTGACTTT +
Preference number: 5 (lower is better)
Translates to: FALPLFPVSLASILRRGPIGSMG*MRNPDF
Trigger: AAAGTCAGGATTTCTCATCAATCCCATGGATCCTAT...AGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp CTGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGATAGGATCCATGGGATaGATGAGAAATCCTGACTTT +
Preference number: 5 (lower is better)
Translates to: LASILRRGPGTDGGWRRKIGSMG*MRNPDF
Trigger: AAAGTCAGGATTTCTCATCAATCCCATGGATCCTAT...CTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
CDS-3UTR CAA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCCCACCGCCGAGTCTTTaGGAATCCAGTCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: CLLQNKELAWKGSEILIFPPPSL*ESSRLP
Trigger: GGGGAGCCGACTGGATTCCAAAAGACTCGGCGGTGG...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACAGAGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACATCTTGCTTTCTAGGGTaGACTGCAGACCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: TQSRISPFHGGSVSSPGTSCFLG*TADQVN
Trigger: GTTGACTTGGTCTGCAGTCAACCCTAGAAAGCAAGA...TGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTTGGCAACTTTTTATTTaGTCCAATGAGGGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESWQLFI*SNEGSQ
Trigger: TTGGGAGCCCTCATTGGACAAAATAAAAAGTTGCCA...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCGTCGGTTCCCAAGCCTaGCAGGAAGAATGTCTACAA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTRHSATFLVGSQA*QEECLQ
Trigger: TTGTAGACATTCTTCCTGCAAGGCTTGGGAACCGAC...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTGCCCTGCCCCTGTTTCCAGTTTCCCTGGCGAGCATCCTCAGGAGGGGCCCTGCTCCGTTCGGTTTCATaGTATTTATTTGTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: LPCPCFQFPWRASSGGALLRSVS*YLFVWL
Trigger: TAACCACACAAATAAATACAATGAAACCGAACGGAG...CAGGGCCCCTCCTGAGGATGCTCGCCAGGGAAACTGGAAACAGGGGCAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CAA 90 bp TGGCGAGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTGGAGGAGAAAGTGGAAAAAGAATACAGTaGCTGCATTTTCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WRASSGGALGLMEVGGESGKRIQ*LHFPEQ
Trigger: CTGCTCTGGAAAATGCAGCAACTGTATTCTTTTTCC...ACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS GCA 90 bp TTGTTCATTCTGAAGGAGCTCCCTGTACCAGGCAGAGGTAGGAGATaGACGACAGCTGCGTGGACAGTTGTACCATGTTCAGAACACCTC +
Preference number: 5 (lower is better)
Translates to: LFILKELPVPGRGRR*TTAAWTVVPCSEHL
Trigger: GAGGTGTTCTGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGCCTGGTACAGGGAGCTCCTTCAGAATGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp TGCAACCACTGCCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCATaGCTCCCTTCTTCTTCCTGTAGAAGATTTGCGCGTCGACGATGC +
Preference number: 5 (lower is better)
Translates to: CNHCPKFLRSWEKSS*LPSSSCRRFARRRC
Trigger: GCATCGTCGACGCGCAAATCTTCTACAGGAAGAAGAAGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000682763.1
CDS CCA 90 bp ATACCTCTGATACTCCTGGATGGTAGCGATGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAAGACGATGAGCTCCTTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: IPLILLDGSDDTIRE*LQVVREDDELLQLG
Trigger: GCCCAGCTGAAGGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTCATCGCTACCATCCAGGAGTATCAGAGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTTCCTCCCATTGGGCCTaGATGTCCTTCAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFSSHWA*MSFSRA
Trigger: GGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGGA...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp CAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTAGGAGCACCGCCTGGTaGTCCACGTTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QPTMINGQPTYSPRFRTFRSTAW*STLCSS
Trigger: GCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCT...AAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp TTCCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCCGCCTTCAGCCACAGTaGGAACTCGTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: FLIQPTMINGQPTYSPRFRLQPQ*ELVHTC
Trigger: GCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCG...GAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCCCCTGGGAAAATCTTaGGCAATGTCCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLPLGKS*AMSCSV
Trigger: CACACTGCAGGACATTGCCAAAGATTTTCCCAGGGG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATTTTGTGCTGGTGGTaGGGGTTCTCCTGGACCAGA +
Preference number: 5 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRILCWW*GFSWTR
Trigger: TCTGGTCCAGGAGAACCCCAACCACCAGCACAAAAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCCCTGACTTTGGGATGTaGTTGGTGAAAACCATTTTC +
Preference number: 5 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLPDFGM*LVKTIF
Trigger: GAAAATGGTTTTCACCAACAACATCCCAAAGTCAGG...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTCCAGAGTCCTTCAGCTaGGACTTGTACAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVPESFS*DLYSIH
Trigger: GTGGATGCTGTACAAGTCCAAGCTGAAGGACTCTGG...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCGAGCGGGCGAAGTTGTaGGCCAGGGTGCAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAERAKL*ARVQLR
Trigger: CCGCAGCTGCACCCTGGCCAACAACTTCGCCCGCTC...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCATGTCTACAATGCCTTaGGGTAGACCTGAAGGACTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTRHSATFLMSTMP*GRPEGL
Trigger: GAGTCCTTCAGGTCTACCCAAAGGCATTGTAGACAT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTAGGGACTGTAGGACTTaGTCCCTCATCTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVRDCRT*SLISTE
Trigger: CTCTGTGGAGATGAGGGACAAAGTCCTACAGTCCCT...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACACGCCACAGCGCCACCTTTCTCATGATTCTAACCAGCTaGGAGTTTTCCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTRHSATFLMILTS*EFSTCN
Trigger: GTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCAT...GAGAAAGGTGGCGCTGTGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCAGGATCTCACCGTTTCATGGGGGCTCGGTGTCATCACCAGGGACAGTCCTCATATCACTCTGTCACTaGTCACTGCTATCATTGAAC +
Preference number: 5 (lower is better)
Translates to: SRISPFHGGSVSSPGTVLISLCH*SLLSLN
Trigger: GTTCAATGATAGCAGTGACAAGTGACAGAGTGATAT...GAGGACTGTCCCTGGTGATGACACCGAGCCCCCATGAAACGGTGAGATCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGAATGACTGCAATCCCGTaGGGCATCTTCAATGGCACA +
Preference number: 5 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRMTAIP*GIFNGT
Trigger: TGTGCCATTGAAGATGCCCAACGGGATTGCAGTCAT...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGACTGCTACTTCCAACTaGCACAAAAGGAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLTATSN*HKRKGR
Trigger: CCTCCCCTTCCTTTTGTGCAAGTTGGAAGTAGCAGT...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp TCCCCAATGCTAACCTGCATGAAGAGTCATGATAGGATGGGTGGCTaGGCCACTAGCCTGGATAAATGCAAAGTTCAGGCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SPMLTCMKSHDRMGG*ATSLDKCKVQASFW
Trigger: CCAGAAAGAGGCCTGAACTTTGCATTTATCCAGGCTAGTGGCTCAGCCACCCATCCTATCATGACTCTTCATGCAGGTTAGCATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 90 bp ATTGCGATGATTCTAACCAGCTTGGAGTTTTCCACCTGCAACCACTaGCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCATGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: IAMILTSLEFSTCNH*PKFLRSWEKSSWLP
Trigger: AGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCATCGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS-3UTR CAA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAATGCGTGATGGGCAGCTaGCAGTTCCGCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKCVMGS*QFRPRQ
Trigger: CTGCCTGGGGCGGAACTGCAAGCTGCCCATCACGCA...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAATCCACCGCCGCGGCATaGCGCAGCCTCGCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: MSSREHSQFMYELCLGFKSTAAA*RSLALF
Trigger: GAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGA...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCAAGGAGCGGGCGAAGTaGTTGGCCAGGGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAKERAK*LARVQL
Trigger: CAGCTGCACCCTGGCCAACAACTTCGCCCGCTCCTT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp CCTTCCCCAACATGTGGTATATGTGACAGGCTGCATACATGCCCAGTGGCTGTTCATTGGAGGGAGCCATaGCTAGGAATTTTCCCAACT +
Preference number: 5 (lower is better)
Translates to: PSPTCGICDRLHTCPVAVHWREP*LGIFPT
Trigger: AGTTGGGAAAATTCCTAGCAATGGCTCCCTCCAATG...AACAGCCACTGGGCATGTATGCAGCCTGTCACATATACCACATGTTGGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGGCCAGTTGGGCTCTGGCCTTGCTGCCTCTCACTGTGTGGCCATGGATCAGTTGAAAGTGACATGTTATaGTTCTTGCTTTCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: WPVGLWPCCLSLCGHGSVESDML*FLLSRV
Trigger: AACCCTAGAAAGCAAGAACAATAACATGTCACTTTC...AACTGATCCATGGCCACACAGTGAGAGGCAGCAAGGCCAGAGCCCAACTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCCTCGTATTGTTTCACTaGCCTTTGGTCAGTGAAAGC +
Preference number: 5 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSLVLFH*PLVSES
Trigger: GCTTTCACTGACCAAAGGCAAGTGAAACAATACGAG...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp GAACTGGACCAATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGAGTTGTTCCCTCGTATaGTTTCACTTGCCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ELDQCHTAHQQQSSNSTLSCSLV*FHLPLV
Trigger: GACCAAAGGCAAGTGAAACAATACGAGGGAACAACT...CAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATTGGTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TGCTGGGCATTGGGGGTGTGGAGTTCTGTCATTCATGACCGAGGACCTCATCATTCTGGTCTTTCGGACTaGAAATTGGAGGGAAAACGT +
Preference number: 5 (lower is better)
Translates to: CWALGVWSSVIHDRGPHHSGLSD*KLEGKR
Trigger: ACGTTTTCCCTCCAATTTCAAGTCCGAAAGACCAGA...ATGATGAGGTCCTCGGTCATGAATGACAGAACTCCACACCCCCAATGCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp TACCCAGCCCAGAACCTGCATTTTAATACAAGGCTGTGTGCCCACTaGAAAGCTCTATGCCGGATTCCAAATTCTCTGAGGGTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: YPAQNLHFNTRLCAH*KALCRIPNSLRVRS
Trigger: GCTTCTGACCCTCAGAGAATTTGGAATCCGGCATAGAGCTTTTCAGTGGGCACACAGCCTTGTATTAAAATGCAGGTTCTGGGCTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCCCCTGCGTGTTGTCATaGACCTGCAGCTGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVPCVLS*TCSWSC
Trigger: GCAGGACCAGCTGCAGGTCAATGACAACACGCAGGG...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAACGGGGTCCCTGCGTGTaGTCATTGACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKRGPCV*SLTCSW
Trigger: CCAGCTGCAGGTCAATGACAACACGCAGGGACCCCG...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp CACACACATGTTCCGAGACAGTCGTTTGGCTCCAATACTGCTTGCCTTCCCAGACAGGCTGGAGAATGCTaGTTGCATTGGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: HTHVPRQSFGSNTACLPRQAGEC*LHWIKM
Trigger: CATCTTAATCCAATGCAACAAGCATTCTCCAGCCTG...TCTGGGAAGGCAAGCAGTATTGGAGCCAAACGACTGTCTCGGAACATGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCGACCTCATCCTGGTGTaGCCAGCTCCCTTCAGCGGT +
Preference number: 5 (lower is better)
Translates to: SSAWLLKRLETKVIRIIADLILV*PAPFSG
Trigger: ACCGCTGAAGGGAGCTGGCAACACCAGGATGAGGTC...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 90 bp GAAGTTCTCATTGCGATGATTCTAACCAGCTTGGAGTTTTCCACCTaGAACCACTGCCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: EVLIAMILTSLEFST*NHCPKFLRSWEKSS
Trigger: TGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCATCGCAATGAGAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS GCA 90 bp AGTTCTGAGATTGTAGGTGTAGCTCACCATACCCAGCCCAGAACCTaGATTTTAATACAAGGCTGTGTGCCCACTGAAAAGCTCTATGCC +
Preference number: 5 (lower is better)
Translates to: SSEIVGVAHHTQPRT*ILIQGCVPTEKLYA
Trigger: GGCATAGAGCTTTTCAGTGGGCACACAGCCTTGTATTAAAATGCAGGTTCTGGGCTGGGTATGGTGAGCTACACCTACAATCTCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 90 bp TTGGAGTTTTCCACCTGCAACCACTGCCCAAAGTTCCTCAGGAGCTaGGAGAAATCTTCATGGCTCCCTTCTTCTTCCTGTAGAAGATTT +
Preference number: 5 (lower is better)
Translates to: LEFSTCNHCPKFLRS*EKSSWLPSSSCRRF
Trigger: AAATCTTCTACAGGAAGAAGAAGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000682763.1
CDS-3UTR CAA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAGGGTCCCCGATCCTGTaGAACAGGGAGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: MSSREHSQFMYELCLGFKGSPIL*NREAAS
Trigger: GGAGGCAGCCTCCCTGTTCAACAGGATCGGGGACCC...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTAAGCCCCTTCTCGGCTaGGACCCTGACCTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVKPLLG*DPDLEV
Trigger: GACCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTT...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCCCCTCACCTGCAACCTaGAGAGCTGGGCCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVPSPAT*RAGPVF
Trigger: GAAAACAGGCCCAGCTCTCAAGGTTGCAGGTGAGGG...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGATGAAGAGCCAGCGTTaGGGCAAAATAAATCCTATG +
Preference number: 5 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLMKSQR*GKINPM
Trigger: CATAGGATTTATTTTGCCCAAACGCTGGCTCTTCAT...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGGCTGGTATTGGAAACTaGCCATTTTCCCAACACACA +
Preference number: 5 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQAGIGN*PFSQHT
Trigger: TGTGTGTTGGGAAAATGGCAAGTTTCCAATACCAGC...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AATGTCACACAGCCCATCAGCAGCAGAGTTCCAACTCAACCCTGTCTAGTGCTGCTTTCGGACTTGAAATaGGAGGGAAAACGTAATCGT +
Preference number: 5 (lower is better)
Translates to: NVTQPISSRVPTQPCLVLLSDLK*EGKRNR
Trigger: ACGATTACGTTTTCCCTCCAATTTCAAGTCCGAAAG...CAGCACTAGACAGGGTTGAGTTGGAACTCTGCTGCTGATGGGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS TCA 90 bp GTGGACAGTTGTACCATGTTCAGAACACCTCGGAGGCTCATGCAGTaGAGACAGGTAACAGATTTCAAATCAACACTTTGCTCGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VDSCTMFRTPRRLMQ*RQVTDFKSTLCSVP
Trigger: TGGAACCGAGCAAAGTGTTGATTTGAAATCTGTTACCTGTCTTCACTGCATGAGCCTCCGAGGTGTTCTGAACATGGTACAACTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS-3UTR CAA 90 bp AACAGAAAGACAGTTTGTCATTTTGCTGAGCTCAAGACTCAGTTGTTTGAGGTCGACTGTCTCCTCCCATaGGGCCTTGATGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: NRKTVCHFAELKTQLFEVDCLLP*GLDVLQ
Trigger: CTGAAGGACATCAAGGCCCAATGGGAGGAGACAGTC...GACCTCAAACAACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAACACGCTTCTGGGCCTaGGCCTTCACTGCATCGTAC +
Preference number: 5 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKTRFWA*AFTASY
Trigger: GTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTGT...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp AGGAGCATACAGCCAAGGCATGGAGGGTCAGGACAAACTCTGGTTTTCTCCTCCAATTTCTCTAGATATTaGGAAACCAAGTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: RSIQPRHGGSGQTLVFSSNFSRY*ETKSQG
Trigger: ACCCTGTGACTTGGTTTCCAAATATCTAGAGAAATT...GGAGGAGAAAACCAGAGTTTGTCCTGACCCTCCATGCCTTGGCTGTATGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AACGGTCAGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGGCTCACGGCAGCTGTaGCTTTGCTGGTTACTGCTA +
Preference number: 5 (lower is better)
Translates to: NGQPTYSPRFRTFILNPKGSRQL*LCWLLL
Trigger: TAGCAGTAACCAGCAAAGCAACAGCTGCCGTGAGCC...TTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCTGACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp CCTTATCCAGCCAACAATGATCAACGGTCAGCCTACTTACAGTCCACGTTTCAGAGACAGTTTGTCATTTaGCTGAGCTCAAGACTCAGT +
Preference number: 5 (lower is better)
Translates to: PYPANNDQRSAYLQSTFQRQFVI*LSSRLS
Trigger: ACTGAGTCTTGAGCTCAGCAAAATGACAAACTGTCT...CTGAAACGTGGACTGTAAGTAGGCTGACCGTTGATCATTGTTGGCTGGATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp TCACTCTCACACTGCAAGGATGATGCCTTCGAGTTCCACACAAGGAGCATACAGAAAATGGGTACAAAGTaGGAACAAGACAGTCTATGG +
Preference number: 5 (lower is better)
Translates to: SLSHCKDDAFEFHTRSIQKMGTK*EQDSLW
Trigger: CCATAGACTGTCTTGTTCCAACTTTGTACCCATTTT...CTGTATGCTCCTTGTGTGGAACTCGAAGGCATCATCCTTGCAGTGTGAGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCCTACTTACAGTCCACGTTTCAGAACATTTATTCTTAATCCCAAAGTTGGTTCCCCTGGGAAAATCTTaGGCAATGTCCTGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLTVHVSEHLFLIPKLVPLGKS*AMSCSV
Trigger: CACACTGCAGGACATTGCCAAAGATTTTCCCAGGGG...AACCAACTTTGGGATTAAGAATAAATGTTCTGAAACGTGGACTGTAAGTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS-3UTR CAA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTGCTTTGGGGTCCTCATaGCCCCATGTTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVALGSS*PHVVGL
Trigger: CAAACCCACAACATGGGGCAATGAGGACCCCAAAGC...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS CCA 90 bp GACATTTGTTTATCTTCCTTTCCATGCCTTCAGCTGGAAACAGTGTaGAGCCAAATAGAACCAAATGGCTCCGTTCGGTTTCATTGTATT +
Preference number: 5 (lower is better)
Translates to: DICLSSFPCLQLETV*SQIEPNGSVRFHCI
Trigger: AATACAATGAAACCGAACGGAGCCATTTGGTTCTATTTGGCTCCACACTGTTTCCAGCTGAAGGCATGGAAAGGAAGATAAACAAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS-3UTR CAA 90 bp TGTCTGCTACAAAACAAAGAGCTGGCCTGGAAAGGCTCAGAGATCCTCATTTTCAGCTACTCTTTGTGGTaGTTAAAACTAGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: CLLQNKELAWKGSEILIFSYSLW*LKLDKH
Trigger: ATGCTTGTCTAGTTTTAACAACCACAAAGAGTAGCT...GAAAATGAGGATCTCTGAGCCTTTCCAGGCCAGCTCTTTGTTTTGTAGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp AGCTCTGCATGGCTGTTAAAGAGGCTGGAAACTAAAGTCATAAGAATAATTGCCATAGGATCCATGGGATaGATGAGAAATCCTGACTTT +
Preference number: 5 (lower is better)
Translates to: SSAWLLKRLETKVIRIIAIGSMG*MRNPDF
Trigger: AAAGTCAGGATTTCTCATCAATCCCATGGATCCTAT...GGCAATTATTCTTATGACTTTAGTTTCCAGCCTCTTTAACAGCCATGCAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp TTTACCATCACAAATAATATGACAAGAGTAGATATGGTCCCTCTGCGTATTGTTATAAAGGAAGGACAGTaGCAAAGCCTTGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: FTITNNMTRVDMVPLRIVIKEGQ*QSLGSD
Trigger: GTCAGAGCCAAGGCTTTGCAACTGTCCTTCCTTTAT...AACAATACGCAGAGGGACCATATCTACTCTTGTCATATTATTTGTGATGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS-3UTR CAA 90 bp ATGTCTTCTAGAGAACACTCTCAATTTATGTATGAGCTGTGCTTGGGTTTTAAAATGTATGAGCTGTGCTaGGGTTTTAAAGAGAGAACT +
Preference number: 5 (lower is better)
Translates to: MSSREHSQFMYELCLGFKMYELC*GFKERT
Trigger: AGTTCTCTCTTTAAAACCCAAGCACAGCTCATACAT...TTTAAAACCCAAGCACAGCTCATACATAAATTGAGAGTGTTCTCTAGAAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS GCA 72 bp CAGCGCCGCCCGTGTTGCCGAGTAGCGTCTCCAGTGTaGCACCAGCTCGTCCTCGGTCCCCGCTTTCGCCGC +
Preference number: 6 (lower is better)
Translates to: QRRPCCRVASPV*HQLVLGPRFRR
Trigger: GCGGCGAAAGCGGGGACCGAGGACGAGCTGGTGGCACACTGGAGACGCTACTCGGCAACACGGGCGGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp CTCGGCATCCCCCGGGCCCGCCTCTCCCCGGTGTGCCTCCAGCTTTaGCGTGGTCACAACGATCCACTGCCGCAGCTCCAGCAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LGIPRARLSPVCLQL*RGHNDPLPQLQQLV
Trigger: CACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCACGCAAAAGCTGGAGGCACACCGGGGAGAGGCGGGCCCGGGGGATGCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GCTGCCTCCTCCAGCAGCCGGTCCAGGAGCACCGCCTaGTTGTCCACGTTGTGCAGCAGCACCTGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: AASSSSRSRSTA*LSTLCSSTWAW
Trigger: CCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCGGCTGCTGGAGGAGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GGGAATTCTGCCACCAGCCTCTCAAACTCGGCCTCTTaGGACTCGGCATCCCCCGGGCCCGCCTCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: GNSATSLSNSAS*DSASPGPASPR
Trigger: CCGGGGAGAGGCGGGCCCGGGGGATGCCGAGTCCCAAGAGGCCGAGTTTGAGAGGCTGGTGGCAGAATTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp GCCTCCTCCAGCAGCCGGTCCAGGAGCACCGCCTGGTaGTCCACGTTGTGCAGCAGCACCTGGGCGTGGCTC +
Preference number: 6 (lower is better)
Translates to: ASSSSRSRSTAW*STLCSSTWAWL
Trigger: GAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCGGCTGCTGGAGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 72 bp GAAGCTGGAGGTCCTGCTGTGCCTGAGCCCGGGGGCTaGGGGACACGTGGAGGCTGGTCTGGAGACGGCTCA +
Preference number: 6 (lower is better)
Translates to: EAGGPAVPEPGG*GTRGGWSGDGS
Trigger: TGAGCCGTCTCCAGACCAGCCTCCACGTGTCCCTCAGCCCCCGGGCTCAGGCACAGCAGGACCTCCAGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp AGCCGGTCCAGGAGCACCGCCTGGTTGTCCACGTTGTaGAGCAGCACCTGGGCGTGGCTCAGCTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: SRSRSTAWLSTL*SSTWAWLSCHC
Trigger: GCAGTGGCAGCTGAGCCACGCCCAGGTGCTGCTGCACAACGTGGACAACCAGGCGGTGCTCCTGGACCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp AGCCTGGCCTCCAGGGCCGCGCGGGGTCCCTGCGTGTaGTCATTGACCTGCAGCTGGTCCTGCACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLASRAARGPCV*SLTCSWSCTAF
Trigger: GAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACGCAGGGACCCCGCGCGGCCCTGGAGGCCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp TGCAGAGGCCGCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATaGCGCAGCCTCGCGCTCTTCACCTTCAGGCTGCAAGGAGCGTGG +
Preference number: 6 (lower is better)
Translates to: CRGRWKCCHSSTAAA*RSLALFTFRLQGAW
Trigger: CCACGCTCCTTGCAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp TCCTCCACGCTCCTGTCAAAGTCGTCCTGGGGCTGCTaGGTCATGGCACCTGCAGGGGCCTCCCGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: SSTLLSKSSWGC*VMAPAGASRSV
Trigger: CACGCTCCGGGAGGCCCCTGCAGGTGCCATGACTCAGCAGCCCCAGGACGACTTTGACAGGAGCGTGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682763.1
CDS GCA 72 bp CACAGCTGCAGATCCTGCAGAGGCCGCTGGAAATGCTaGCACAGCTCCACCGCCGCGGCATTGCGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: HSCRSCRGRWKC*HSSTAAALRSL
Trigger: GAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GGCCCGCCTCTCCCCGGTGTGCCTCCAGCTTTTGCGTaGTCACAACGATCCACTGCCGCAGCTCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GPPLPGVPPAFA*SQRSTAAAPAA
Trigger: AGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCACGCAAAAGCTGGAGGCACACCGGGGAGAGGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp TGGGCATCTTCGTCCACGCTGGGGTCCCCGATCCTGTaGAACAGGGAGGCTGCCTCCTCCAGCAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: WASSSTLGSPIL*NREAASSSSRS
Trigger: GGACCGGCTGCTGGAGGAGGCAGCCTCCCTGTTCAACAGGATCGGGGACCCCAGCGTGGACGAAGATGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 72 bp CCTCCAGGGCCGCGCGGGGTCCCTGCGTGTTGTCATTaGCCTGCAGCTGGTCCTGCACAGCCTTCATCCATG +
Preference number: 6 (lower is better)
Translates to: PPGPRGVPACCH*PAAGPAQPSSM
Trigger: CATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACGCAGGGACCCCGCGCGGCCCTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp AACTCACTGAGCTCAGCCTCCAGCTGCTTAATCTGCTaGTCCCAGGCTCCCCTGGACCGGAGCAGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: NSLSSASSCLIC*SQAPLDRSRPR
Trigger: GCGGGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGAGGCTGAGCTCAGTGAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp TTCCACAGCTGCAGATCCTGCAGAGGCCGCTGGAAATaGTGCCACAGCTCCACCGCCGCGGCATTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: FHSCRSCRGRWK*CHSSTAAALRS
Trigger: GCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp ACCTCCAAGAGCCGCTGGGCCAGGGCCTTCCACAGCTaGAGATCCTGCAGAGGCCGCTGGAAATGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TSKSRWARAFHS*RSCRGRWKCCH
Trigger: GTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAAGGCCCTGGCCCAGCGGCTCTTGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp GCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCACCTTCAGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: AGNAATAPPPRH*AASRSSPSGCK
Trigger: CTTGCAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp TTGATGTCCTTCAGCCGGGCCAGGATCCCGGGCTTCTaGTCCCCAGGGCAGCATGCCAAGAGGGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: LMSFSRARIPGF*SPGQHAKRASA
Trigger: GGCTGAAGCCCTCTTGGCATGCTGCCCTGGGGACCAGAAGCCCGGGATCCTGGCCCGGCTGAAGGACATCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGGGCCTTCCACAGCTGCAGATCCTGCAGAGGCCGCTaGAAATGCTGCCACAGCTCCACCGCCGCGGCATTG +
Preference number: 6 (lower is better)
Translates to: RAFHSCRSCRGR*KCCHSSTAAAL
Trigger: CAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCGGCCTCTGCAGGATCTGCAGCTGTGGAAGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp ATCACCAGCCAGCCCTGCGCTTCCACCAGGGACAGCTaGGCCTCCTTCTCCGGGAATTCTGCCACCAGCCTC +
Preference number: 6 (lower is better)
Translates to: ITSQPCASTRDS*ASFSGNSATSL
Trigger: GAGGCTGGTGGCAGAATTCCCGGAGAAGGAGGCCCAGCTGTCCCTGGTGGAAGCGCAGGGCTGGCTGGTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp GCCTCCAGGGCCGCGCGGGGTCCCTGCGTGTTGTCATaGACCTGCAGCTGGTCCTGCACAGCCTTCATCCAT +
Preference number: 6 (lower is better)
Translates to: ASRAARGPCVLS*TCSWSCTAFIH
Trigger: ATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACGCAGGGACCCCGCGCGGCCCTGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp CGCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATaGCGCAGCCTCGCGCTCTTCACCTTCAGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: RWKCCHSSTAAA*RSLALFTFRLQ
Trigger: TTGCAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp CAACGATCCACTGCCGCAGCTCCAGCAGCTGGTGGCTaGAGGTGCAGTGCTCCTGCACACTCTGCCGACACC +
Preference number: 6 (lower is better)
Translates to: QRSTAAAPAAGG*RCSAPAHSADT
Trigger: GGTGTCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp ACACCTGCCTGGTACTCCTCATGCTCCCGGGCCACCTaGTCCAGCAGATCTACACGCTTCTGGGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TPAWYSSCSRAT*SSRSTRFWALA
Trigger: GGCCAAGGCCCAGAAGCGTGTAGATCTGCTGGAGCAGGTGGCCCGGGAGCATGAGGAGTACCAGGCAGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp CACCGCCTTCAGCCACAGTTGGAACTCGTCCACACCTaGCTGGTACTCCTCATGCTCCCGGGCCACCTGCTC +
Preference number: 6 (lower is better)
Translates to: HRLQPQLELVHT*LVLLMLPGHLL
Trigger: GAGCAGGTGGCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp CTGAACTCACTGAGCTCAGCCTCCAGCTGCTTAATCTaGTGCTCCCAGGCTCCCCTGGACCGGAGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LNSLSSASSCLI*CSQAPLDRSRP
Trigger: GGGCCTGCTCCGGTCCAGGGGAGCCTGGGAGCAGCAGATTAAGCAGCTGGAGGCTGAGCTCAGTGAGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp GCTGGAAATGCTGCCACAGCTCCACCGCCGCGGCATTaGGCAGCCTCGCGCTCTTCACCTTCAGGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: AGNAATAPPPRH*AASRSSPSGSD
Trigger: ATCAGAGCCTGAAGGTGAAGAGCGCGAGGCTGCGCAATGCCGCGGCGGTGGAGCTGTGGCAGCATTTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GCGCGGGGTCCCTGCGTGTTGTCATTGACCTGCAGCTaGTCCTGCACAGCCTTCATCCATGCCTGGGCATCC +
Preference number: 6 (lower is better)
Translates to: ARGPCVLSLTCS*SCTAFIHAWAS
Trigger: GGATGCCCAGGCATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAATGACAACACGCAGGGACCCCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GCCTTCAGCCACAGTTGGAACTCGTCCACACCTGCCTaGTACTCCTCATGCTCCCGGGCCACCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: AFSHSWNSSTPA*YSSCSRATCSS
Trigger: GCTGGAGCAGGTGGCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp TCCTGCAGTGTGGAGAGGCGCTGCGTGATGGGCAGCTaGCAGTTCCGCCCCAGGCAGCCATTCACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SCSVERRCVMGS*QFRPRQPFTFS
Trigger: GGAGAAGGTGAATGGCTGCCTGGGGCGGAACTGCAAGCTGCCCATCACGCAGCGCCTCTCCACACTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp CCCCAGGCAGCCATTCACCTTCTCCACCACCGCCTTCAGCCACAGTaGGAACTCGTCCACACCTGCCTGGTACTCCTCATGCTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PQAAIHLLHHRLQPQ*ELVHTCLVLLMLPG
Trigger: GCCCGGGAGCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCGGTGGTGGAGAAGGTGAATGGCTGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp TTGGCAATGTCCTGCAGTGTGGAGAGGCGCTGCGTGATGGGCAGCTaGCAGTTCCGCCCCAGGCAGCCATTCACCTTCTCCACCACCGCC +
Preference number: 6 (lower is better)
Translates to: LAMSCSVERRCVMGS*QFRPRQPFTFSTTA
Trigger: GGCGGTGGTGGAGAAGGTGAATGGCTGCCTGGGGCGGAACTGCAAGCTGCCCATCACGCAGCGCCTCTCCACACTGCAGGACATTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 72 bp CTTGAGAGCTGGGCCTGTTTTCCAGGAAGGTCCCGCTaGAGCCCCTTCTCGGCTTGGACCCTGACCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LESWACFPGRSR*SPFSAWTLTWR
Trigger: CCTCCAGGTCAGGGTCCAAGCCGAGAAGGGGCTTCAGCGGGACCTTCCTGGAAAACAGGCCCAGCTCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 72 bp GCTGGCCCGAGACGAAGGAGGTTCTCAAAGAGATGCTaGCCTTCTGGCACCCGAGCCTCCAGCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AGPRRRRFSKRC*PSGTRASSSCS
Trigger: GCTGCAGGAGCTGGAGGCTCGGGTGCCAGAAGGTCAGCATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp CCCAAAGGAGAGGTGTTCCGAATGACACCCGCAGACTaGTCCTCCAGCGTCTCCAGAGACTCCTCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PKGEVFRMTPAD*SSSVSRDSSPL
Trigger: CAGGGGCGAGGAGTCTCTGGAGACGCTGGAGGAGCAGTCTGCGGGTGTCATTCGGAACACCTCTCCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp GCCTCCGCCAAGACCCTCAAGAGGCCCAGCATGCACTaGTCCCAGGGTGGGCCTTCTCCTGTTTCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: ASAKTLKRPSMH*SQGGPSPVSVA
Trigger: AGCAACTGAAACAGGAGAAGGCCCACCCTGGGAGCAGTGCATGCTGGGCCTCTTGAGGGTCTTGGCGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp ATGAGGCCTCCGCCAAGACCCTCAAGAGGCCCAGCATaGACTGCTCCCAGGGTGGGCCTTCTCCTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: MRPPPRPSRGPA*TAPRVGLLLFQ
Trigger: CTGAAACAGGAGAAGGCCCACCCTGGGAGCAGTGCATGCTGGGCCTCTTGAGGGTCTTGGCGGAGGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp GTCACAACGATCCACTGCCGCAGCTCCAGCAGCTGGTaGCTGAAGGTGCAGTGCTCCTGCACACTCTGCCGA +
Preference number: 6 (lower is better)
Translates to: VTTIHCRSSSSW*LKVQCSCTLCR
Trigger: TCGGCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GTGGTCACAACGATCCACTGCCGCAGCTCCAGCAGCTaGTGGCTGAAGGTGCAGTGCTCCTGCACACTCTGC +
Preference number: 6 (lower is better)
Translates to: VVTTIHCRSSSS*WLKVQCSCTLC
Trigger: GCAGAGTGTGCAGGAGCACTGCACCTTCAGCCACCAGCTGCTGGAGCTGCGGCAGTGGATCGTTGTGACCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGAGGGAGACGCTGCTTCCAGGTGCAGCTGAGCACCTaGGCAGGAGTGATTCAGGCCTCACAGACCCCTCAC +
Preference number: 6 (lower is better)
Translates to: RGRRCFQVQLST*AGVIQASQTPH
Trigger: GTGAGGGGTCTGTGAGGCCTGAATCACTCCTGCCCAGGTGCTCAGCTGCACCTGGAAGCAGCGTCTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS TCA 72 bp TCCCTTGCAGGTGCTACTGCTAGTGGCTCACAGAGGTaGGTATCTCCCGGGCCCAGCAGCATGGGCCTATCC +
Preference number: 6 (lower is better)
Translates to: SLAGATASGSQR*VSPGPSSMGLS
Trigger: GGATAGGCCCATGCTGCTGGGCCCGGGAGATACTCACCTCTGTGAGCCACTAGCAGTAGCACCTGCAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp AAGTCACCTGTGTGCCCCAGTGGGTTAGGTGGGTGGTaGGCCATTGTAGCGCAGCATGAGCGTGAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: KSPVCPSGLGGW*AIVAQHEREGA
Trigger: CGCTCCTTCACGCTCATGCTGCGCTACAATGGCCCACCACCCACCTAACCCACTGGGGCACACAGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp GATGCGGCTGTGACAGTGAGTCATGTAGGTGACTGTCTCCTCCCATaGGGCCTTGATGTCCTTCAGCCGGGCCAGGATCCCGGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: DAAVTVSHVGDCLLP*GLDVLQPGQDPGLL
Trigger: CAGAAGCCCGGGATCCTGGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGGAGACAGTCACCTACATGACTCACTGTCACAGCCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp AGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTGGTaGGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCCATCTGTGCC +
Preference number: 6 (lower is better)
Translates to: RAWKSEESWSILCWW*GFSWTRGLAASICA
Trigger: GGCACAGATGGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp AGAGACCTCTGCAGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTaGTGCTGGTGGTTGGGGTTCTCCTGGACCAGAGGCCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: RDLCRAWKSEESWSI*CWWLGFSWTRGLAA
Trigger: GGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCAGAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS TCA 72 bp GTGATTCAGGCCTCACAGACCCCTCACCTGCAACCTTaGGAGCTGGGCCTGTTTTCCAGGAAGGTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: VIQASQTPHLQP*ELGLFSRKVPL
Trigger: CAGCGGGACCTTCCTGGAAAACAGGCCCAGCTCTCAAGGTTGCAGGTGAGGGGTCTGTGAGGCCTGAATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS CCA 72 bp GCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTTGCTaGCCCGAGACGAAGGAGGTTCTCAAAGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: AQIFQLIRGPPC*PETKEVLKEML
Trigger: CAGCATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp TGGAGGTTGGAGGAGAAAGTCACCTGTGTGCCCCAGTaGGTTAGGTGGGTGGTGGGCCATTGTAGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: WRLEEKVTCVPQ*VRWVVGHCSAA
Trigger: TGCTGCGCTACAATGGCCCACCACCCACCTAACCCACTGGGGCACACAGGTGACTTTCTCCTCCAACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGCATCCTCAGGAGGGGCCCTGGGACTGATGGAGGTTaGAGGAGAAAGTCACCTGTGTGCCCCAGTGGGTTA +
Preference number: 6 (lower is better)
Translates to: SILRRGPGTDGG*RRKSPVCPSGL
Trigger: TAACCCACTGGGGCACACAGGTGACTTTCTCCTCCAACCTCCATCAGTCCCAGGGCCCCTCCTGAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GACCCTCAAGAGGCCCAGCATGCACTGCTCCCAGGGTaGGCCTTCTCCTGTTTCAGTTGCTGGGAATGTCTG +
Preference number: 6 (lower is better)
Translates to: DPQEAQHALLPG*AFSCFSCWECL
Trigger: CAGACATTCCCAGCAACTGAAACAGGAGAAGGCCCACCCTGGGAGCAGTGCATGCTGGGCCTCTTGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp AGCAGACCTGGGACTGCCCTGCAAAACACTGATTCCTaGAGTCCTGCGTTAGAGCCAGAGAGGGGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SRPGTALQNTDS*SPALEPERGLP
Trigger: GGGAAGGCCCCTCTCTGGCTCTAACGCAGGACTCCAGGAATCAGTGTTTTGCAGGGCAGTCCCAGGTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS CAA 72 bp TGCAGGGCCTGGAAGTCGGAGGAAAGCTGGTCCATTTaGTGCTGGTGGTTGGGGTTCTCCTGGACCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CRAWKSEESWSI*CWWLGFSWTRG
Trigger: GCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp GCATCCACTGGTAGCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTaGCTGGCCCGAGACGAAGGAGGTTCTCAAAGAGATGCTGACCTT +
Preference number: 6 (lower is better)
Translates to: ASTGSADLPAHPRSP*LARDEGGSQRDADL
Trigger: AAGGTCAGCATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGCTACCAGTGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp ATTGACCTGCAGCTGGTCCTGCACAGCCTTCATCCATaGCTGGGCATCCTCCACGCTCCTGTCAAAGTCGTC +
Preference number: 6 (lower is better)
Translates to: IDLQLVLHSLHP*LGILHAPVKVV
Trigger: GACGACTTTGACAGGAGCGTGGAGGATGCCCAGGCATGGATGAAGGCTGTGCAGGACCAGCTGCAGGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp GTAGCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTTaGTGGCCCGAGACGAAGGAGGTTCTCAAAGAGATG +
Preference number: 6 (lower is better)
Translates to: VAQIFQLIRGPP*WPETKEVLKEM
Trigger: CATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp CACTGCTTCTCCTTCAGGCCCAGCTGGAGCTCGATGTaGGGCTCCAGTGTGACCATCATCTTCTGGAACCAG +
Preference number: 6 (lower is better)
Translates to: HCFSFRPSWSSM*GSSVTIIFWNQ
Trigger: CTGGTTCCAGAAGATGATGGTCACACTGGAGCCCCACATCGAGCTCCAGCTGGGCCTGAAGGAGAAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GCCTTCACTGCATCGTACTCAGCCTTCATTCTCTTCTaGGCATCTTCGTCCACGCTGGGGTCCCCGATCCTG +
Preference number: 6 (lower is better)
Translates to: AFTASYSAFILF*ASSSTLGSPIL
Trigger: CAGGATCGGGGACCCCAGCGTGGACGAAGATGCCCAGAAGAGAATGAAGGCTGAGTACGATGCAGTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp CCATTCACCTTCTCCACCACCGCCTTCAGCCACAGTTaGAACTCGTCCACACCTGCCTGGTACTCCTCATGC +
Preference number: 6 (lower is better)
Translates to: PFTFSTTAFSHS*NSSTPAWYSSC
Trigger: GCATGAGGAGTACCAGGCAGGTGTGGACGAGTTCCAACTGTGGCTGAAGGCGGTGGTGGAGAAGGTGAATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTGGTTaGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SRRKAGPFCAGG*GSPGPEALQPP
Trigger: TGGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp TGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTaGTTGGGGTTCTCCTGGACCAGAGGCCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: WKSEESWSILCW*LGFSWTRGLAA
Trigger: GGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp GCCTGGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTaGTGGTTGGGGTTCTCCTGGACCAGAGGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: AWKSEESWSILC*WLGFSWTRGLA
Trigger: TGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp CTGTCCACAAGGTCCTCCAGAGACCTCTGCAGGGCCTaGAAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LSTRSSRDLCRA*KSEESWSILCW
Trigger: CCAGCACAAAATGGACCAGCTTTCCTCCGACTTCCAGGCCCTGCAGAGGTCTCTGGAGGACCTTGTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGAAAGTCACCTGTGTGCCCCAGTGGGTTAGGTGGGTaGTGGGCCATTGTAGCGCAGCATGAGCGTGAAGGA +
Preference number: 6 (lower is better)
Translates to: RKSPVCPSGLGG*WAIVAQHEREG
Trigger: TCCTTCACGCTCATGCTGCGCTACAATGGCCCACCACCCACCTAACCCACTGGGGCACACAGGTGACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp GTGACAGTGAGTCATGTAGGTGACTGTCTCCTCCCATaGGGCCTTGATGTCCTTCAGCCGGGCCAGGATCCC +
Preference number: 6 (lower is better)
Translates to: VTVSHVGDCLLP*GLDVLQPGQDP
Trigger: GGGATCCTGGCCCGGCTGAAGGACATCAAGGCCCAATGGGAGGAGACAGTCACCTACATGACTCACTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp AAGTCGGAGGAAAGCTGGTCCATTTTGTGCTGGTGGTaGGGGTTCTCCTGGACCAGAGGCCTTGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: KSEESWSILCWW*GFSWTRGLAAS
Trigger: GGAGGCTGCAAGGCCTCTGGTCCAGGAGAACCCCAACCACCAGCACAAAATGGACCAGCTTTCCTCCGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp GGTAGCGCAGATCTTCCAGCTCATCCGAGGTCCCCCTaGCTGGCCCGAGACGAAGGAGGTTCTCAAAGAGAT +
Preference number: 6 (lower is better)
Translates to: GSADLPAHPRSP*LARDEGGSQRD
Trigger: ATCTCTTTGAGAACCTCCTTCGTCTCGGGCCAGCAAGGGGGACCTCGGATGAGCTGGAAGATCTGCGCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp AGTGATTCAGGCCTCACAGACCCCTCACCTGCAACCTaGAGAGCTGGGCCTGTTTTCCAGGAAGGTCCCGCT +
Preference number: 6 (lower is better)
Translates to: SDSGLTDPSPAT*RAGPVFQEGPA
Trigger: AGCGGGACCTTCCTGGAAAACAGGCCCAGCTCTCAAGGTTGCAGGTGAGGGGTCTGTGAGGCCTGAATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553340.1
CDS CAA 72 bp GGACACGTGGAGGCTGGTCTGGAGACGGCTCAGATGTaGAAGTCAGCATCCGAAGGCAGGGGAATGGAGTCT +
Preference number: 6 (lower is better)
Translates to: GHVEAGLETAQM*KSASEGRGMES
Trigger: AGACTCCATTCCCCTGCCTTCGGATGCTGACTTCAACATCTGAGCCGTCTCCAGACCAGCCTCCACGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 72 bp CTCCCGGGCCCAGCAGCATGGGCCTATCCCGAGAGCTaGTTAGAAATGCAGAATCGAATTGTGGGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: LPGPAAWAYPES*LEMQNRIVGPS
Trigger: GCTAGGGCCCACAATTCGATTCTGCATTTCTAACAAGCTCTCGGGATAGGCCCATGCTGCTGGGCCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp TTCTGGAGATGGGGAAATGTGGGTTCCAGCACACCCTaGGTCCCACCACCCTTGGCCTTCCCAGATACCTCT +
Preference number: 6 (lower is better)
Translates to: FWRWGNVGSSTP*VPPPLAFPDTS
Trigger: AGAGGTATCTGGGAAGGCCAAGGGTGGTGGGACTCAGGGTGTGCTGGAACCCACATTTCCCCATCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp CAAATGCTCTTTGGCCACAGCTGGGGCAGGCTCAAATaGGACAGGACGTGGCCAAGTCCTCAGAGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: QMLFGHSWGRLK*DRTWPSPQSRA
Trigger: TGCTCTGCTCTGAGGACTTGGCCACGTCCTGTCTCATTTGAGCCTGCCCCAGCTGTGGCCAAAGAGCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp TTCCCTGCAGGAGCTGCTGCTAGTGGCTCACAGAGGTaGGTATCTGACTGGCTAAGGGATACCCCTACTGCC +
Preference number: 6 (lower is better)
Translates to: FPAGAAASGSQR*VSDWLRDTPTA
Trigger: GGCAGTAGGGGTATCCCTTAGCCAGTCAGATACTCACCTCTGTGAGCCACTAGCAGCAGCTCCTGCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp GAGGTCCAAGAGCTTCCTCTGCAGGGGCTCAAAAGCTaGTCCAAAGTCTTTGTGCTGAGCGAGCAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: EVQELPLQGLKS*SKVFVLSEQAL
Trigger: CAGAGCCTGCTCGCTCAGCACAAAGACTTTGGAGCAGCTTTTGAGCCCCTGCAGAGGAAGCTCTTGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp ACTGCTCCTCCAGCGTCTCCAGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGTCCTGCAGTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: TAPPASPETPRP*ENLWQCPAVWR
Trigger: TCTCCACACTGCAGGACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTCTGGAGACGCTGGAGGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp ATGTGGGTTCCAGCACACCCTGAGTCCCACCACCCTTaGCCTTCCCAGATACCTCTGATACTCCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: MWVPAHPESHHP*PSQIPLILLDG
Trigger: ACCATCCAGGAGTATCAGAGGTATCTGGGAAGGCCAAGGGTGGTGGGACTCAGGGTGTGCTGGAACCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp GTACCAGGCAGAGGTAGGAGATGCACGACAGCTGCGTaGACAGTTGTACCATGTTCAGAACACCTCGGAGGC +
Preference number: 6 (lower is better)
Translates to: VPGRGRRCTTAA*TVVPCSEHLGG
Trigger: GCCTCCGAGGTGTTCTGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGCCTGGTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp CTGAAGGAGCTCCCTGTACCAGGCAGAGGTAGGAGATaGACGACAGCTGCGTGGACAGTTGTACCATGTTCA +
Preference number: 6 (lower is better)
Translates to: LKELPVPGRGRR*TTAAWTVVPCS
Trigger: TGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGCCTGGTACAGGGAGCTCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp ATCGCAAAGGTCCATGCCCTCAGGATAAAAGTGCACTaGAAGCAAGCCAGTCCAACAGACGGATGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: IAKVHALRIKVH*KQASPTDGWPS
Trigger: GCTGGGCCATCCGTCTGTTGGACTGGCTTGCTTGCAGTGCACTTTTATCCTGAGGGCATGGACCTTTGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp TGCCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCATaGCTCCCTTCTTCTTCGCGTCGACGATGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CPKFLRSWEKSS*LPSSSRRRCLG
Trigger: TCCCAGGCATCGTCGACGCGAAGAAGAAGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS CCA 72 bp TGCCCCAGTTTTATAGATGTAGGCCTGAGCACGCTGTaGGATGAGAGCCACACAGCAAAGGTAGGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: CPSFIDVGLSTL*DESHTAKVGAP
Trigger: GGGAGCTCCTACCTTTGCTGTGTGGCTCTCATCCCACAGCGTGCTCAGGCCTACATCTATAAAACTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp ACTGCTCCTCCAGCGTCTCCAGAGACTCCTCGCCCCTaGGAAAATCTTTGGCAATGTCCTGAAGAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: TAPPASPETPRP*ENLWQCPEEGR
Trigger: TCTACCCTCTTCAGGACATTGCCAAAGATTTTCCCAGGGGCGAGGAGTCTCTGGAGACGCTGGAGGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS CAA 72 bp GCAGAGGTAGGAGATGCACGACAGCTGCGTGGACAGTaGTACCATGTTCAGAACACCTCGGAGGCTCATGCA +
Preference number: 6 (lower is better)
Translates to: AEVGDARQLRGQ*YHVQNTSEAHA
Trigger: TGCATGAGCCTCCGAGGTGTTCTGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 90 bp CTGTACCAGGCAGAGGTAGGAGATGCACGACAGCTGCGTGGACAGTaGTACCATGTTCAGAACACCTCGGAGGCTCATGCAGTGAAGACA +
Preference number: 6 (lower is better)
Translates to: LYQAEVGDARQLRGQ*YHVQNTSEAHAVKT
Trigger: TGTCTTCACTGCATGAGCCTCCGAGGTGTTCTGAACATGGTACAACTGTCCACGCAGCTGTCGTGCATCTCCTACCTCTGCCTGGTACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp CAGCAGATCTACACGCTTCTGGGCCTTGGCCTTCACTaGATCGTACTCAGCCTTCATTCTCTTCTGGGCATC +
Preference number: 6 (lower is better)
Translates to: QQIYTLLGLGLH*IVLSLHSLLGI
Trigger: GATGCCCAGAAGAGAATGAAGGCTGAGTACGATGCAGTGAAGGCCAAGGCCCAGAAGCGTGTAGATCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp TCTGAGGTCCTCTGTGGAGTAGGATCAAATGCTCTTTaGCCACAGCTGGGGCAGGCTCAAATGAGACAGGAC +
Preference number: 6 (lower is better)
Translates to: SEVLCGVGSNAL*PQLGQAQMRQD
Trigger: GTCCTGTCTCATTTGAGCCTGCCCCAGCTGTGGCCAAAGAGCATTTGATCCTACTCCACAGAGGACCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp TTTCCTCATCTCTTCCAGTTCTCCGGTGATCTTCTCTaGACCCAAAGGAGAGGTGTTCCGAATGACACCCGC +
Preference number: 6 (lower is better)
Translates to: FPHLFQFSGDLL*TQRRGVPNDTR
Trigger: GCGGGTGTCATTCGGAACACCTCTCCTTTGGGTGCAGAGAAGATCACCGGAGAACTGGAAGAGATGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp ATTGCGATGATTCTAACCAGCTTGGAGTTTTCCACCTaGAACCACTGCCCAAAGTTCCTCAGGAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: IAMILTSLEFST*NHCPKFLRSWE
Trigger: CTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCATCGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp AGAGTCATGATAGGATGGGTGGCTGAGCCACTAGCCTaGATAAATGCAAAGTTCAGGCCTCTTTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: RVMIGWVAEPLA*INAKFRPLSGS
Trigger: GCTCCCAGAAAGAGGCCTGAACTTTGCATTTATCCAGGCTAGTGGCTCAGCCACCCATCCTATCATGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 72 bp GCGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: ARRRCLGIGSMG*MRNPDFGMLLV
Trigger: CACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000682763.1
CDS TCA 72 bp CTAACCTGCATGAAGAGTCATGATAGGATGGGTGGCTaGGCCACTAGCCTGGATAAATGCAAAGTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: LTCMKSHDRMGG*ATSLDKCKVQA
Trigger: GGCCTGAACTTTGCATTTATCCAGGCTAGTGGCTCAGCCACCCATCCTATCATGACTCTTCATGCAGGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp ATACTCCTGGATGGTAGCGATGACACTATCAGAGAGTaGCTTCAGGTTGTGAGGGAAGACGATGAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: ILLDGSDDTIRE*LQVVREDDELL
Trigger: AAGGAGCTCATCGTCTTCCCTCACAACCTGAAGCCACTCTCTGATAGTGTCATCGCTACCATCCAGGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334258.9
ENST00000553340.1
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS CCA 72 bp TGCCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCATaGCTCCCTTCTTCTTCCTGTAGAAGATTTGCGCGT +
Preference number: 6 (lower is better)
Translates to: CPKFLRSWEKSS*LPSSSCRRFAR
Trigger: ACGCGCAAATCTTCTACAGGAAGAAGAAGGGAGCCATGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000682763.1
CDS CAA 72 bp TCGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: SRRRCLGIGSMG*MRNPDFGMLLV
Trigger: CACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS CAA 72 bp ACGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: TRRRCLGIGSMG*MRNPDFGMLLV
Trigger: CACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 90 bp AAGTCCTCAGCTGTAGAAGTTCTCATTGCGATGATTCTAACCAGCTaGGAGTTTTCCACCTGCAACCACTGCCCAAAGTTCCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: KSSAVEVLIAMILTS*EFSTCNHCPKFLRS
Trigger: GCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCATCGCAATGAGAACTTCTACAGCTGAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp GAGGCTCATGCAGTGAAGACAGGTAACAGATTTCAAATCAACACTTaGCTCGGTTCCACACAGGGAGGATACAGGGCTGCTGCATTTGCT +
Preference number: 6 (lower is better)
Translates to: EAHAVKTGNRFQINT*LGSTQGGYRAAAFA
Trigger: AGCAAATGCAGCAGCCCTGTATCCTCCCTGTGTGGAACCGAGCAAAGTGTTGATTTGAAATCTGTTACCTGTCTTCACTGCATGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS GCA 72 bp ATTTTCTTCCCCGAATCCACTTCCATCCTCTGCAGATaGCAGTTTCTGATGAGGCTCAGCAGACTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: IFFPESTSILCR*QFLMRLSRLSS
Trigger: GGAAGAAAGTCTGCTGAGCCTCATCAGAAACTGGCATCTGCAGAGGATGGAAGTGGATTCGGGGAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000555759.1
ENST00000557275.5
ENST00000682763.1
CDS GCA 72 bp ATTCTAACCAGCTTGGAGTTTTCCACCTGCAACCACTaGCCAAAGTTCCTCAGGAGCTGGGAGAAATCTTCA +
Preference number: 6 (lower is better)
Translates to: ILTSLEFSTCNH*PKFLRSWEKSS
Trigger: TGAAGATTTCTCCCAGCTCCTGAGGAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 72 bp GCAGTGAAGACAGGTAACAGATTTCAAATCAACACTTaGCTCGGTTCCACACAGGGAGGATACAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVKTGNRFQINT*LGSTQGGYRAA
Trigger: AGCAGCCCTGTATCCTCCCTGTGTGGAACCGAGCAAAGTGTTGATTTGAAATCTGTTACCTGTCTTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 72 bp CGGATGGCCCAGCTTCATGACCAAGGAATACAAGCCTaGAAGATAAATTATGGAGACCCTAGACCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: RMAQLHDQGIQA*KINYGDPRPVL
Trigger: CAGGACTGGTCTAGGGTCTCCATAATTTATCTTCAAGGCTTGTATTCCTTGGTCATGAAGCTGGGCCATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 90 bp GACAGACTCACGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTGAAAACCATT +
Preference number: 6 (lower is better)
Translates to: DRLTRRRCLGIGSMG*MRNPDFGMLLVKTI
Trigger: AATGGTTTTCACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGTGAGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 90 bp CCTTCTTCTTCGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTGAAAACCATT +
Preference number: 6 (lower is better)
Translates to: PSSSRRRCLGIGSMG*MRNPDFGMLLVKTI
Trigger: AATGGTTTTCACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGAAGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557275.5
CDS GCA 72 bp ATTGTAGGTGTAGCTCACCATACCCAGCCCAGAACCTaGATTTTAATACAAGGCTGTGTGCCCACTGAAAAG +
Preference number: 6 (lower is better)
Translates to: IVGVAHHTQPRT*ILIQGCVPTEK
Trigger: CTTTTCAGTGGGCACACAGCCTTGTATTAAAATGCAGGTTCTGGGCTGGGTATGGTGAGCTACACCTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp CGAGTGTTCTCTGATTCTATAGTAGGTATAAAGAGCTaGGAGTTTGGAGCCAGACAGGCCAGCTATATGACC +
Preference number: 6 (lower is better)
Translates to: RVFSDSIVGIKS*EFGARQASYMT
Trigger: GGTCATATAGCTGGCCTGTCTGGCTCCAAACTCCCAGCTCTTTATACCTACTATAGAATCAGAGAACACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CAA 72 bp GCTGTAGAAGTTCTCATTGCGATGATTCTAACCAGCTaGGAGTTTTCCACCTGCAACCACTGCCCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: AVEVLIAMILTS*EFSTCNHCPKF
Trigger: GAACTTTGGGCAGTGGTTGCAGGTGGAAAACTCCAAGCTGGTTAGAATCATCGCAATGAGAACTTCTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000557275.5
ENST00000682763.1
CDS CAA 90 bp AGAAGATTTGCGCGTCGACGATGCCTGGGAATAGGATCCATGGGATaGATGAGAAATCCTGACTTTGGGATGTTGTTGGTGAAAACCATT +
Preference number: 6 (lower is better)
Translates to: RRFARRRCLGIGSMG*MRNPDFGMLLVKTI
Trigger: AATGGTTTTCACCAACAACATCCCAAAGTCAGGATTTCTCATCAATCCCATGGATCCTATTCCCAGGCATCGTCGACGCGCAAATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334258.9
ENST00000554873.5
ENST00000682763.1
CDS TCA 72 bp CAGAACCTGCATTTTAATACAAGGCTGTGTGCCCACTaGAAAGCTCTATGCCGGATTCCAAATTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: QNLHFNTRLCAH*KALCRIPNSLR
Trigger: CCTCAGAGAATTTGGAATCCGGCATAGAGCTTTTCAGTGGGCACACAGCCTTGTATTAAAATGCAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS TCA 72 bp TGTACCATGTTCAGAACACCTCGGAGGCTCATGCAGTaGAGACAGGTAACAGATTTCAAATCAACACTTTGC +
Preference number: 6 (lower is better)
Translates to: CTMFRTPRRLMQ*RQVTDFKSTLC
Trigger: GCAAAGTGTTGATTTGAAATCTGTTACCTGTCTTCACTGCATGAGCCTCCGAGGTGTTCTGAACATGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp GTTTGGAGCCAGACAGGCCAGCTATATGACCTTAAGTaGCTCAATATTAACAAGCCTCAGTTTTCTCACCTA +
Preference number: 6 (lower is better)
Translates to: VWSQTGQLYDLK*LNINKPQFSHL
Trigger: TAGGTGAGAAAACTGAGGCTTGTTAATATTGAGCCACTTAAGGTCATATAGCTGGCCTGTCTGGCTCCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555759.1
CDS CCA 72 bp TCAGCTGGAAACAGTGTGGAGCCAAATAGAACCAAATaGCTCCGTTCGGTTTCATTGTATTTATTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: SAGNSVEPNRTK*LRSVSLYLFVW
Trigger: CCACACAAATAAATACAATGAAACCGAACGGAGCCATTTGGTTCTATTTGGCTCCACACTGTTTCCAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS CAA 90 bp AACCTGAGAACCCTATTCCTTCCCCATAAGTCTTTTTCAAGCCATTaGATTAAGTCAAGGAGAAAGTCTCTGTTGGGTGCTTCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: NLRTLFLPHKSFSSH*IKSRRKSLLGASVL
Trigger: CAAGACAGAAGCACCCAACAGAGACTTTCTCCTTGACTTAATCAAATGGCTTGAAAAAGACTTATGGGGAAGGAATAGGGTTCTCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS TCA 72 bp CCCTATTCCTTCCCCATAAGTCTTTTTCAAGCCATTTaGTTAAGTCAAGGAGAAAGTCTCTGTTGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: PYSFPISLFQAI*LSQGESLCWVL
Trigger: AAGCACCCAACAGAGACTTTCTCCTTGACTTAATCAAATGGCTTGAAAAAGACTTATGGGGAAGGAATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS CAA 90 bp AACAGTGTGGAGCCAAATAGAACCAAATGGCTCCGTTCGGTTTCATaGTATTTATTTGTGTGGTTATCTACCTATTTGGAATTGGCACCA +
Preference number: 6 (lower is better)
Translates to: NSVEPNRTKWLRSVS*YLFVWLSTYLELAP
Trigger: TGGTGCCAATTCCAAATAGGTAGATAACCACACAAATAAATACAATGAAACCGAACGGAGCCATTTGGTTCTATTTGGCTCCACACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS TCA 72 bp AGTCAAGGAGAAAGTCTCTGTTGGGTGCTTCTGTCTTaGACACTTTCTGACATTTGTTTATCTTCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SQGESLCWVLLS*TLSDICLSSFP
Trigger: TGGAAAGGAAGATAAACAAATGTCAGAAAGTGTTCAAGACAGAAGCACCCAACAGAGACTTTCTCCTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554873.5
CDS TCA 72 bp CAGTGCTCCTCTCATATAATCATTCTAAGTGTTAGATaGGATGACACATGGAGACATTATTCTTCCAGTAAC +
Preference number: 6 (lower is better)
Translates to: QCSSHIIILSVR*DDTWRHYSSSN
Trigger: GTTACTGGAAGAATAATGTCTCCATGTGTCATCTCATCTAACACTTAGAATGATTATATGAGAGGAGCACTG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555759.1